IQGAP1 (IQ motif containing GTPase activating protein 1) - Rat Genome Database

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Gene: IQGAP1 (IQ motif containing GTPase activating protein 1) Chlorocebus sabaeus
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Symbol: IQGAP1
Name: IQ motif containing GTPase activating protein 1
RGD ID: 18571043
Description: ENCODES a protein that exhibits mitogen-activated protein kinase binding (ortholog); protein-containing complex binding (ortholog); INVOLVED IN positive regulation of dendrite development (ortholog); positive regulation of focal adhesion assembly (ortholog); positive regulation of MAP kinase activity (ortholog); PARTICIPATES IN E-cadherin signaling pathway; insulin responsive facilitative sugar transporter mediated glucose transport pathway; platelet-derived growth factor signaling pathway; ASSOCIATED WITH Bloom syndrome (ortholog); Brain Neoplasms (ortholog); colorectal cancer (ortholog); FOUND IN actin cytoskeleton (ortholog); axon (ortholog); growth cone (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: LOC103231193; LOC103231194; ras GTPase-activating-like protein IQGAP1
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: ChlSab1.1 - Green Monkey 1.1 Assembly
Position:
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1299,363,273 - 9,485,644 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl299,362,926 - 9,485,526 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366605937,209,223 - 37,324,055 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
IQGAP1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1299,363,273 - 9,485,644 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl299,362,926 - 9,485,526 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366605937,209,223 - 37,324,055 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
IQGAP1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381590,388,242 - 90,502,239 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1590,388,242 - 90,502,239 (+)EnsemblGRCh38hg38GRCh38
GRCh371590,931,474 - 91,045,471 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361588,732,477 - 88,846,479 (+)NCBINCBI36Build 36hg18NCBI36
Build 341588,732,476 - 88,846,479NCBI
Celera1567,336,216 - 67,450,214 (+)NCBICelera
Cytogenetic Map15q26.1NCBI
HuRef1567,043,721 - 67,156,752 (+)NCBIHuRef
CHM1_11590,773,219 - 90,887,196 (+)NCBICHM1_1
T2T-CHM13v2.01588,144,255 - 88,258,256 (+)NCBIT2T-CHM13v2.0
Iqgap1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39780,361,331 - 80,453,288 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl780,361,331 - 80,475,722 (-)EnsemblGRCm39 Ensembl
GRCm38780,711,583 - 80,815,549 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl780,711,583 - 80,825,974 (-)EnsemblGRCm38mm10GRCm38
MGSCv37787,856,469 - 87,948,217 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36780,586,294 - 80,676,807 (-)NCBIMGSCv36mm8
Celera778,116,162 - 78,211,858 (-)NCBICelera
Cytogenetic Map7D3NCBI
cM Map745.68NCBI
Iqgap1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81144,088,788 - 144,178,989 (-)NCBIGRCr8
mRatBN7.21134,679,581 - 134,769,776 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1134,679,586 - 134,769,755 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1142,588,968 - 142,679,115 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01149,758,382 - 149,848,532 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01142,676,568 - 142,767,383 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01142,525,041 - 142,615,673 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1142,525,046 - 142,615,673 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01143,476,882 - 143,567,395 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41136,552,358 - 136,642,545 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11136,631,848 - 136,722,691 (-)NCBI
Celera1126,734,261 - 126,824,269 (-)NCBICelera
Cytogenetic Map1q31NCBI
Iqgap1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495541614,560,292 - 14,650,036 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495541614,558,628 - 14,652,031 (+)NCBIChiLan1.0ChiLan1.0
IQGAP1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21679,935,362 - 80,049,434 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11583,634,820 - 83,748,904 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01569,076,025 - 69,190,082 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11588,276,762 - 88,390,721 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1588,276,851 - 88,388,594 (+)Ensemblpanpan1.1panPan2
IQGAP1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1353,683,869 - 53,791,136 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl353,683,791 - 53,792,186 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha356,321,230 - 56,429,279 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0354,099,750 - 54,207,801 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl354,098,495 - 54,207,760 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1353,618,792 - 53,726,768 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0353,830,202 - 53,938,180 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0354,170,507 - 54,278,357 (-)NCBIUU_Cfam_GSD_1.0
Iqgap1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024408640129,739,918 - 129,845,387 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493648316,489,133 - 16,594,783 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_00493648316,489,127 - 16,594,712 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
Iqgap1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462476817,702,728 - 17,799,022 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462476817,703,113 - 17,797,922 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in IQGAP1
2802 total Variants

Expression

RNA-SEQ Expression

ectoderm
endocrine system
hemolymphoid system
mesenchyme
mesoderm
nervous system
reproductive system
76 36 20 36 36 60 20

Sequence

Nucleotide Sequences
RefSeq Transcripts XM_007990469 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide JBLKOC010000029 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSCSAT00000015118   ⟹   ENSCSAP00000013068
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
ChlSab1.1 Ensembl299,362,926 - 9,485,526 (-)Ensembl
RefSeq Acc Id: XM_007990469   ⟹   XP_007988660
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
ChlSab1.1299,363,273 - 9,485,644 (-)NCBI
Vero_WHO_p1.0NW_02366605937,209,223 - 37,324,055 (+)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_007988660 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSCSAP00000013068.1
RefSeq Acc Id: XP_007988660   ⟸   XM_007990469
- UniProtKB: A0A0D9RWS9 (UniProtKB/TrEMBL)
Ensembl Acc Id: ENSCSAP00000013068   ⟸   ENSCSAT00000015118


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCSAG00000017030 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSCSAT00000015118.1 UniProtKB/TrEMBL
Gene3D-CATH 1.10.418.10 UniProtKB/TrEMBL
  1.20.5.190 UniProtKB/TrEMBL
  2.20.70.10 UniProtKB/TrEMBL
  GTPase Activation - p120gap, domain 1 UniProtKB/TrEMBL
  Myosin, subunit A UniProtKB/TrEMBL
InterPro CH-domain UniProtKB/TrEMBL
  CH_dom_sf UniProtKB/TrEMBL
  IQ_motif_EF-hand-BS UniProtKB/TrEMBL
  P-loop_NTPase UniProtKB/TrEMBL
  RasGAP_C UniProtKB/TrEMBL
  RasGAP_CS UniProtKB/TrEMBL
  RasGAP_dom UniProtKB/TrEMBL
  Rho_GTPase_activation_prot UniProtKB/TrEMBL
  WW_dom UniProtKB/TrEMBL
KEGG Report csab:103231194 UniProtKB/TrEMBL
NCBI Gene LOC103231194 ENTREZGENE
PANTHER RAS GTPASE-ACTIVATING PROTEIN WITH IQ MOTIF UniProtKB/TrEMBL
  RAS GTPASE-ACTIVATING-LIKE PROTEIN IQGAP1 UniProtKB/TrEMBL
Pfam PF00307 UniProtKB/TrEMBL
  PF00612 UniProtKB/TrEMBL
  RasGAP UniProtKB/TrEMBL
  RasGAP_C UniProtKB/TrEMBL
PROSITE PS50021 UniProtKB/TrEMBL
  PS50096 UniProtKB/TrEMBL
  RAS_GTPASE_ACTIV_1 UniProtKB/TrEMBL
  RAS_GTPASE_ACTIV_2 UniProtKB/TrEMBL
  WW_DOMAIN_1 UniProtKB/TrEMBL
  WW_DOMAIN_2 UniProtKB/TrEMBL
SMART RasGAP UniProtKB/TrEMBL
  SM00015 UniProtKB/TrEMBL
  SM00033 UniProtKB/TrEMBL
  SM00456 UniProtKB/TrEMBL
Superfamily-SCOP RGC domain-like UniProtKB/TrEMBL
  SSF47576 UniProtKB/TrEMBL
  SSF48350 UniProtKB/TrEMBL
  SSF52540 UniProtKB/TrEMBL
UniProt A0A0D9RWS9 ENTREZGENE, UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2020-12-08 IQGAP1  IQ motif containing GTPase activating protein 1  LOC103231194  ras GTPase-activating-like protein IQGAP1  Symbol and/or name change 5135510 APPROVED
2020-12-03 LOC103231194  ras GTPase-activating-like protein IQGAP1  LOC103231193  ras GTPase-activating-like protein IQGAP1  Data merged from RGD:18569334 737654 PROVISIONAL