SLC2A9 (solute carrier family 2 member 9) - Rat Genome Database

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Gene: SLC2A9 (solute carrier family 2 member 9) Chlorocebus sabaeus
Analyze
Symbol: SLC2A9
Name: solute carrier family 2 member 9
RGD ID: 18433808
Description: ENCODES a protein that exhibits D-glucose transmembrane transporter activity (ortholog); fructose transmembrane transporter activity (ortholog); urate transmembrane transporter activity (ortholog); INVOLVED IN D-glucose transmembrane transport (ortholog); fructose transmembrane transport (ortholog); urate metabolic process (ortholog); ASSOCIATED WITH abdominal obesity-metabolic syndrome (ortholog); attention deficit hyperactivity disorder (ortholog); Benign Essential Blepharospasm (ortholog); FOUND IN apical plasma membrane (ortholog); basolateral plasma membrane (ortholog); plasma membrane (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: solute carrier family 2, facilitated glucose transporter member 9
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: ChlSab1.1 - Green Monkey 1.1 Assembly
Position:
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12740,030,051 - 40,224,069 (+)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_02366604786,830,901 - 86,970,736 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
SLC2A9
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12740,030,051 - 40,224,069 (+)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_02366604786,830,901 - 86,970,736 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
SLC2A9
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh3849,771,025 - 10,040,270 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl49,771,153 - 10,054,936 (-)EnsemblGRCh38hg38GRCh38
GRCh3749,827,848 - 10,041,894 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 3649,436,946 - 9,650,970 (-)NCBINCBI36Build 36hg18NCBI36
Build 3449,504,117 - 9,699,383NCBI
Celera410,310,714 - 10,524,222 (-)NCBICelera
Cytogenetic Map4p16.1NCBI
HuRef49,162,269 - 9,375,568 (-)NCBIHuRef
CHM1_149,825,801 - 10,040,024 (-)NCBICHM1_1
T2T-CHM13v2.049,770,809 - 10,039,839 (-)NCBIT2T-CHM13v2.0
Slc2a9
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39538,506,616 - 38,660,488 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl538,506,616 - 38,660,486 (-)EnsemblGRCm39 Ensembl
GRCm38538,349,272 - 38,503,147 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl538,349,273 - 38,503,143 (-)EnsemblGRCm38mm10GRCm38
MGSCv37538,740,512 - 38,893,391 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36538,637,555 - 38,790,401 (-)NCBIMGSCv36mm8
Celera535,802,909 - 35,950,476 (-)NCBICelera
Cytogenetic Map5B3NCBI
cM Map520.43NCBI
Slc2a9
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81476,540,649 - 76,674,277 (+)NCBIGRCr8
mRatBN7.21472,328,334 - 72,461,981 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1472,328,320 - 72,461,981 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1476,790,316 - 76,903,628 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01478,031,186 - 78,144,522 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01474,471,251 - 74,584,577 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01477,067,537 - 77,192,702 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1477,067,503 - 77,192,702 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01477,050,030 - 77,174,290 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41477,624,411 - 77,740,695 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera1471,300,173 - 71,413,222 (+)NCBICelera
Cytogenetic Map14q21NCBI
Slc2a9
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049555145,479,585 - 5,625,223 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049555145,479,585 - 5,625,328 (-)NCBIChiLan1.0ChiLan1.0
SLC2A9
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2310,023,459 - 10,270,679 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1410,232,093 - 10,479,383 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v044,232,737 - 4,442,387 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.149,606,182 - 9,771,104 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl49,553,491 - 9,746,981 (-)Ensemblpanpan1.1panPan2
SLC2A9
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1369,394,304 - 69,588,462 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl369,394,152 - 69,595,802 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha371,951,679 - 72,140,512 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0370,150,039 - 70,345,339 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl370,149,887 - 70,345,335 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1369,429,052 - 69,619,481 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0369,593,868 - 69,784,921 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0369,977,002 - 70,166,047 (+)NCBIUU_Cfam_GSD_1.0
Slc2a9
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440528562,998,205 - 63,134,783 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493647716,717,002 - 16,834,663 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_00493647716,700,915 - 16,836,424 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
SLC2A9
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl86,210,478 - 6,367,496 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.186,211,143 - 6,367,530 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Slc2a9
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462475521,171,274 - 21,322,543 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462475521,165,374 - 21,328,843 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in SLC2A9
6267 total Variants

Expression

RNA-SEQ Expression


Sequence


RefSeq Acc Id: XM_038008705   ⟹   XP_037864633
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
Vero_WHO_p1.0NW_02366604786,830,901 - 86,970,736 (+)NCBI
RefSeq Acc Id: XM_038008706   ⟹   XP_037864634
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
Vero_WHO_p1.0NW_02366604786,860,992 - 86,970,736 (+)NCBI
RefSeq Acc Id: XM_038008707   ⟹   XP_037864635
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
Vero_WHO_p1.0NW_02366604786,860,982 - 86,970,736 (+)NCBI
Protein Sequences
Protein RefSeqs XP_037864633 (Get FASTA)   NCBI Sequence Viewer  
  XP_037864634 (Get FASTA)   NCBI Sequence Viewer  
  XP_037864635 (Get FASTA)   NCBI Sequence Viewer  
RefSeq Acc Id: XP_037864633   ⟸   XM_038008705
- Peptide Label: isoform X1
RefSeq Acc Id: XP_037864635   ⟸   XM_038008707
- Peptide Label: isoform X2
RefSeq Acc Id: XP_037864634   ⟸   XM_038008706
- Peptide Label: isoform X2


Additional Information

Database Acc Id Source(s)
NCBI Gene SLC2A9 ENTREZGENE