Cep164 (centrosomal protein 164) - Rat Genome Database

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Gene: Cep164 (centrosomal protein 164) Mus musculus
Analyze
Symbol: Cep164
Name: centrosomal protein 164
RGD ID: 1623824
MGI Page MGI
Description: Predicted to be involved in cilium assembly. Located in 9+2 motile cilium; apical part of cell; and centriole. Part of ciliary transition fiber. Is expressed in several structures, including brain; genitourinary system; gut; respiratory system; and retina. Human ortholog(s) of this gene implicated in hepatocellular carcinoma and nephronophthisis 15. Orthologous to human CEP164 (centrosomal protein 164).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: AI450905; centrosomal protein of 164 kDa; D030051D21; KIAA1052; MGC38792; mKIAA1052
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39945,678,244 - 45,739,984 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl945,678,244 - 45,739,989 (-)EnsemblGRCm39 Ensembl
GRCm38945,766,946 - 45,828,686 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl945,766,946 - 45,828,691 (-)EnsemblGRCm38mm10GRCm38
MGSCv37945,575,029 - 45,636,721 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36945,517,724 - 45,579,686 (-)NCBIMGSCv36mm8
Celera943,049,408 - 43,111,380 (-)NCBICelera
Cytogenetic Map9A5.2NCBI
cM Map925.1NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
abnormal brain ependyma motile cilium location or orientation  (IAGP)
abnormal cauda epididymis morphology  (IAGP)
abnormal efferent ductules of testis morphology  (IAGP)
abnormal heart looping  (IAGP)
abnormal olfactory epithelium cilium morphology  (IAGP)
abnormal oviduct epithelium motile cilium morphology  (IAGP)
abnormal postnatal subventricular zone morphology  (IAGP)
abnormal primary cilium morphology  (IAGP)
abnormal respiratory motile cilium morphology  (IAGP)
abnormal seminiferous tubule epithelium morphology  (IAGP)
abnormal seminiferous tubule morphology  (IAGP)
abnormal sperm flagellum morphology  (IAGP)
abnormal sperm physiology  (IAGP)
abnormal tracheal ciliated epithelium morphology  (IAGP)
absent sperm head  (IAGP)
azoospermia  (IAGP)
caudal body truncation  (IAGP)
coughing  (IAGP)
decreased brain ependyma motile cilium number  (IAGP)
decreased embryonic neuroepithelium primary cilium number  (IAGP)
decreased male germ cell number  (IAGP)
decreased respiratory motile cilia number  (IAGP)
dilated efferent ductule of testis  (IAGP)
dilated rete testis  (IAGP)
dilated seminiferous tubule  (IAGP)
domed cranium  (IAGP)
embryonic lethality during organogenesis, complete penetrance  (IAGP)
enlarged lateral ventricles  (IAGP)
enlarged seminiferous tubules  (IAGP)
holoprosencephaly  (IAGP)
hydrocephaly  (IAGP)
impaired mucociliary clearance  (IAGP)
lethality at weaning, incomplete penetrance  (IAGP)
male infertility  (IAGP)
oligozoospermia  (IAGP)
pericardial edema  (IAGP)
preweaning lethality, complete penetrance  (IEA)
rete testis obstruction  (IAGP)
seminiferous tubule degeneration  (IAGP)
sneezing  (IAGP)
teratozoospermia  (IAGP)
References

References - curated
# Reference Title Reference Citation
1. OMIM Disease Annotation Pipeline OMIM Disease Annotation Pipeline
2. Mouse MP Annotation Import Pipeline RGD automated import pipeline
3. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
4. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
5. Genetic risk of hepatocellular carcinoma in patients with hepatitis C virus: a case control study. Tomoda T, etal., J Gastroenterol Hepatol. 2012 Apr;27(4):797-804. doi: 10.1111/j.1440-1746.2011.06948.x.
Additional References at PubMed
PMID:8889548   PMID:10349636   PMID:10922068   PMID:11042159   PMID:11076861   PMID:11217851   PMID:12466851   PMID:12477932   PMID:14610273   PMID:15226823   PMID:16141072   PMID:16141073  
PMID:17920017   PMID:18973680   PMID:20643351   PMID:21267068   PMID:21677750   PMID:21873635   PMID:22718903   PMID:23955340   PMID:24194600   PMID:24421332   PMID:24469809   PMID:26337392  
PMID:27626380   PMID:29038301   PMID:29244804   PMID:29487109   PMID:29891944   PMID:31248650   PMID:31990917   PMID:32238932   PMID:32325033   PMID:33410253   PMID:34050161   PMID:34085951  
PMID:34321999   PMID:34815315   PMID:35772791   PMID:35987808   PMID:36074756   PMID:38355793  


Genomics

Comparative Map Data
Cep164
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39945,678,244 - 45,739,984 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl945,678,244 - 45,739,989 (-)EnsemblGRCm39 Ensembl
GRCm38945,766,946 - 45,828,686 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl945,766,946 - 45,828,691 (-)EnsemblGRCm38mm10GRCm38
MGSCv37945,575,029 - 45,636,721 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36945,517,724 - 45,579,686 (-)NCBIMGSCv36mm8
Celera943,049,408 - 43,111,380 (-)NCBICelera
Cytogenetic Map9A5.2NCBI
cM Map925.1NCBI
CEP164
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh3811117,321,778 - 117,413,266 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl11117,314,557 - 117,413,266 (+)EnsemblGRCh38hg38GRCh38
GRCh3711117,192,494 - 117,283,982 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 3611116,703,781 - 116,789,192 (+)NCBINCBI36Build 36hg18NCBI36
Celera11114,356,228 - 114,441,648 (+)NCBICelera
Cytogenetic Map11q23.3NCBI
HuRef11113,126,326 - 113,217,565 (+)NCBIHuRef
CHM1_111117,078,144 - 117,169,637 (+)NCBICHM1_1
T2T-CHM13v2.011117,338,426 - 117,429,915 (+)NCBIT2T-CHM13v2.0
Cep164
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8854,967,621 - 55,031,264 (-)NCBIGRCr8
mRatBN7.2846,070,901 - 46,134,511 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl846,071,076 - 46,134,336 (-)EnsemblmRatBN7.2 Ensembl
Rnor_6.0850,069,282 - 50,132,477 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl850,070,579 - 50,126,413 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0848,693,534 - 48,757,643 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4848,737,084 - 48,807,528 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera845,653,631 - 45,717,293 (-)NCBICelera
Cytogenetic Map8q22NCBI
Cep164
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495541218,634,074 - 18,694,346 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495541218,627,023 - 18,695,685 (+)NCBIChiLan1.0ChiLan1.0
CEP164
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v29118,017,176 - 118,115,418 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan111119,123,280 - 119,220,377 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v011112,157,774 - 112,249,004 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.111116,096,165 - 116,181,613 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl11116,106,847 - 116,180,516 (+)Ensemblpanpan1.1panPan2
CEP164
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1516,227,369 - 16,290,781 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl516,227,292 - 16,291,229 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha516,276,622 - 16,340,023 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0516,168,676 - 16,232,080 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl516,168,677 - 16,232,535 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1516,306,570 - 16,370,026 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0516,209,549 - 16,272,986 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0516,251,809 - 16,315,281 (-)NCBIUU_Cfam_GSD_1.0
Cep164
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494799,623,245 - 99,688,344 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365422,544,665 - 2,609,792 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365422,544,677 - 2,609,753 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
CEP164
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl944,670,874 - 44,752,469 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1944,670,857 - 44,752,477 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2949,743,861 - 49,825,467 (+)NCBISscrofa10.2Sscrofa10.2susScr3
CEP164
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11108,690,196 - 108,787,175 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1108,701,884 - 108,790,678 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366604317,267,500 - 17,353,051 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Cep164
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462478412,773,870 - 12,836,107 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462478412,754,685 - 12,837,440 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Cep164
1874 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:745
Count of miRNA genes:476
Interacting mature miRNAs:545
Transcripts:ENSMUST00000117194, ENSMUST00000132430, ENSMUST00000152629
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1301782Chol11_mcholesterol 11 (mouse)Not determined92929292963293072Mouse
11532712Sluc39d_msusceptibility to lung cancer 39d (mouse)92558748559587581Mouse
12790986Pcho9_mplasma cholesterol 9 (mouse)93809957572099575Mouse
13504834Hdlq109_mHDL QTL 109 (mouse)91670964150709641Mouse
1357465Vtbt6_mvertebral trabecular bone trait 6 (mouse)Not determined91697884050978943Mouse
12790993Adq1_maortic diameter QTL 1 (mouse)91574962749749627Mouse
12790992Arlsq1_maortic root lesion size QTL 1 (mouse)93809957572099575Mouse
10043917Obq37_mobesity QTL 37 (mouse)Not determined91339117547391175Mouse
12790997Adq2_maortic diameter QTL 2 (mouse)91574962749749627Mouse
1301252Etohc3_methanol consumption 3 (mouse)Not determined93503447869034599Mouse
1357709Si5lq3_mserum IGFBP-5 level QTL 3 (mouse)Not determined93311102567111140Mouse
12791002Arlsq2_maortic root lesion size QTL 2 (mouse)93809957572099575Mouse
1301558Stheal8_msoft tissue heal 8 (mouse)Not determined94348071477480860Mouse
1301045Sluc10_msusceptibility to lung cancer 10 (mouse)Not determined92030619754306370Mouse
1357746Vtbt7_mvertebral trabecular bone trait 7 (mouse)Not determined93073991564740021Mouse
1300532Tbs2_mtuberculosis severity 2 (mouse)Not determined91236997046370114Mouse
1301435Trigq1_mtriglyceride QTL 1 (mouse)Not determined94442817478428262Mouse
4141591Cq4_mcholesterol QTL 4 (mouse)Not determined91541175149411890Mouse
1301439Morph2_mmorphine antinociception 2 (mouse)Not determined92015336254153492Mouse
1301692Hts_mhypothermia sensitivity (mouse)Not determined93251117266511421Mouse
1558968Tbdr1_mbody temperature response to dietary restriction, QTL 1 (mouse)Not determined93503447869034599Mouse
4142352Lmr17_mleishmaniasis resistance 17 (mouse)Not determined92030619754306370Mouse
12904939Edlmmq8_mextensor digitorum longus muscle mass QTL 8 (mouse)92085274054852740Mouse
4141071Ath29_matherosclerosis 29 (mouse)Not determined94041959474607925Mouse
1300643Pvcan2_mprotection against vaginal candidiasis 2 (mouse)Not determined91994340653943525Mouse
13432191Actrse4_mactivity response to saline/ethanol 4 (mouse)94370321448603195Mouse
4141323Ptnu3_mproteinuria 3 (mouse)Not determined93288970266889836Mouse
10045613Rapop7_mradiation-induced apoptosis 6 (mouse)Not determined93673624349420511Mouse
1302180Actd4_mactivity-distance traveled 4 (mouse)Not determined93243456366434857Mouse
10043950Pbft5_mpercent body fat 5 (mouse)Not determined92030619754306370Mouse
11532696Sluc39c_msusceptibility to lung cancer 39c (mouse)92558748559587581Mouse
4141447Cfmq2_mcystic fibrosis modifier QTL 2 (mouse)Not determined91541175149411890Mouse
11532695Sluc39b_msusceptibility to lung cancer 39b (mouse)92558748559587581Mouse
11532694Sluc39a_msusceptibility to lung cancer 39a (mouse)92558748559587581Mouse
13208563Bmiq8_mbody mass index QTL 8 (mouse)92491129668907282Mouse
11532693Sluc39_msusceptibility to lung cancer 39 (mouse)94064537448351476Mouse
1301421Lgth4_mbody length 4 (mouse)Not determined91541175149411890Mouse
10043867Mtbcq9_mmultiple trait body composition QTL 9 (mouse)Not determined92679642160796552Mouse
1558993Tdmq1_mtype 2 diabetes modifying QTL 1 (mouse)Not determined94041959451808670Mouse
1301972Cocrb8_mcocaine related behavior 8 (mouse)Not determined93503447869034599Mouse
10043987Stheal13_msoft tissue heal 13 (mouse)Not determined92679642160796552Mouse
1558872Ibdq1_minflammatory bowel disease QTL 1 (mouse)Not determined93397884073439255Mouse
1357637Si5lq2_mserum IGFBP-5 level QTL 2 (mouse)Not determined91541175149411890Mouse
12738449Spcq2_msperm count QTL 2 (mouse)93939988573399885Mouse
1301702Brm1_mbrachyury modifier 1 (mouse)Not determined94080504774805204Mouse
1300932Hdlq17_mHDL QTL 17 (mouse)Not determined92679642160796552Mouse
10043971Obq32_mobesity QTL 32 (mouse)Not determined93781952871819528Mouse
12880415V125Dq7_mvitamin D active form serum level QTL 7 (mouse)91601129650011296Mouse
10043847Hdlq89_mHDL QTL 89 (mouse)Not determined92929292963293072Mouse
10045639Heal28_mwound healing/regeneration 28 (mouse)Not determined94348071477480860Mouse
4141148Cq5_mcholesterol QTL 5 (mouse)Not determined93245242166452546Mouse
12880416V125Dq8_mvitamin D active form serum level QTL 8 (mouse)91601129650011296Mouse
4142042Alpq3_malcohol preference QTL 3 (mouse)Not determined93730619798701707Mouse
1301365Ap5q_malcohol preference 5 QTL (mouse)Not determined93005316464053277Mouse
1301883Skull12_mskull morphology 12 (mouse)Not determined92030619754306370Mouse
11354951Pdcc3_mplasmacytoid dentritic cell compartment 3 (mouse)91574962749749627Mouse
1301501Lmr2_mleishmaniasis resistance 2 (mouse)Not determined93694340650111140Mouse
10043878Adip20_madiposity 20 (mouse)Not determined92725119461251323Mouse


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001081373 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006510133 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006510135 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006510136 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006510137 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006510138 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006510139 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006510140 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011242446 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011242448 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030244219 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036154821 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_379109 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC126804 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK032890 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK050991 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK158671 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK220365 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BB206864 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC027092 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC066145 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC076567 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BE950451 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CJ129260 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CK789347 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSMUST00000117194   ⟹   ENSMUSP00000114053
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl945,678,244 - 45,739,989 (-)Ensembl
GRCm38.p6 Ensembl945,766,946 - 45,828,691 (-)Ensembl
Ensembl Acc Id: ENSMUST00000132430   ⟹   ENSMUSP00000117344
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl945,689,708 - 45,713,965 (-)Ensembl
GRCm38.p6 Ensembl945,778,410 - 45,802,667 (-)Ensembl
Ensembl Acc Id: ENSMUST00000152629
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl945,682,038 - 45,683,829 (-)Ensembl
GRCm38.p6 Ensembl945,770,740 - 45,772,531 (-)Ensembl
Ensembl Acc Id: ENSMUST00000213154   ⟹   ENSMUSP00000149815
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl945,679,556 - 45,735,025 (-)Ensembl
GRCm38.p6 Ensembl945,768,258 - 45,823,727 (-)Ensembl
Ensembl Acc Id: ENSMUST00000214868   ⟹   ENSMUSP00000149980
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl945,729,368 - 45,739,937 (-)Ensembl
GRCm38.p6 Ensembl945,818,070 - 45,828,639 (-)Ensembl
Ensembl Acc Id: ENSMUST00000214971
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl945,679,366 - 45,680,075 (-)Ensembl
GRCm38.p6 Ensembl945,768,068 - 45,768,777 (-)Ensembl
Ensembl Acc Id: ENSMUST00000216284   ⟹   ENSMUSP00000150742
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl945,678,256 - 45,714,554 (-)Ensembl
GRCm38.p6 Ensembl945,766,958 - 45,803,256 (-)Ensembl
Ensembl Acc Id: ENSMUST00000217022
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl945,703,436 - 45,705,887 (-)Ensembl
GRCm38.p6 Ensembl945,792,138 - 45,794,589 (-)Ensembl
Ensembl Acc Id: ENSMUST00000217554   ⟹   ENSMUSP00000149347
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl945,690,752 - 45,705,564 (-)Ensembl
GRCm38.p6 Ensembl945,779,454 - 45,794,266 (-)Ensembl
RefSeq Acc Id: NM_001081373   ⟹   NP_001074842
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39945,678,244 - 45,739,961 (-)NCBI
GRCm38945,766,946 - 45,828,663 (-)NCBI
MGSCv37945,575,029 - 45,636,721 (-)RGD
Celera943,049,408 - 43,111,380 (-)RGD
cM Map9 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_006510133   ⟹   XP_006510196
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39945,678,244 - 45,739,984 (-)NCBI
GRCm38945,766,946 - 45,828,686 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006510135   ⟹   XP_006510198
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39945,678,244 - 45,739,984 (-)NCBI
GRCm38945,766,951 - 45,828,686 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006510136   ⟹   XP_006510199
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39945,678,244 - 45,739,984 (-)NCBI
GRCm38945,766,951 - 45,828,686 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006510137   ⟹   XP_006510200
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39945,678,244 - 45,739,984 (-)NCBI
GRCm38945,766,951 - 45,828,686 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006510138   ⟹   XP_006510201
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39945,678,244 - 45,739,984 (-)NCBI
GRCm38945,766,951 - 45,828,686 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006510139   ⟹   XP_006510202
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39945,678,244 - 45,739,984 (-)NCBI
GRCm38945,766,951 - 45,828,686 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006510140   ⟹   XP_006510203
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39945,678,244 - 45,739,984 (-)NCBI
GRCm38945,766,951 - 45,828,686 (-)NCBI
Sequence:
RefSeq Acc Id: XM_011242446   ⟹   XP_011240748
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39945,678,244 - 45,739,973 (-)NCBI
GRCm38945,766,951 - 45,828,675 (-)NCBI
Sequence:
RefSeq Acc Id: XM_011242448   ⟹   XP_011240750
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39945,690,441 - 45,739,984 (-)NCBI
GRCm38945,779,143 - 45,828,686 (-)NCBI
Sequence:
RefSeq Acc Id: XM_030244219   ⟹   XP_030100079
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39945,678,244 - 45,739,784 (-)NCBI
GRCm38945,766,951 - 45,828,488 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036154821   ⟹   XP_036010714
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39945,678,244 - 45,739,984 (-)NCBI
Sequence:
RefSeq Acc Id: XR_379109
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39945,688,136 - 45,739,984 (-)NCBI
GRCm38945,776,838 - 45,828,686 (-)NCBI
Sequence:
RefSeq Acc Id: NP_001074842   ⟸   NM_001081373
- UniProtKB: Q8BSI0 (UniProtKB/Swiss-Prot),   Q8BQD2 (UniProtKB/Swiss-Prot),   Q6NZG6 (UniProtKB/Swiss-Prot),   Q5DU05 (UniProtKB/Swiss-Prot),   Q3TYF9 (UniProtKB/Swiss-Prot),   D3YVU3 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006510203   ⟸   XM_006510140
- Peptide Label: isoform X7
- UniProtKB: Q8BSI0 (UniProtKB/Swiss-Prot),   Q8BQD2 (UniProtKB/Swiss-Prot),   Q6NZG6 (UniProtKB/Swiss-Prot),   Q5DU05 (UniProtKB/Swiss-Prot),   Q3TYF9 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_006510202   ⟸   XM_006510139
- Peptide Label: isoform X6
- Sequence:
RefSeq Acc Id: XP_006510199   ⟸   XM_006510136
- Peptide Label: isoform X3
- Sequence:
RefSeq Acc Id: XP_006510201   ⟸   XM_006510138
- Peptide Label: isoform X5
- Sequence:
RefSeq Acc Id: XP_006510198   ⟸   XM_006510135
- Peptide Label: isoform X2
- Sequence:
RefSeq Acc Id: XP_006510200   ⟸   XM_006510137
- Peptide Label: isoform X4
- Sequence:
RefSeq Acc Id: XP_006510196   ⟸   XM_006510133
- Peptide Label: isoform X1
- UniProtKB: A0A1L1SSA4 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_011240748   ⟸   XM_011242446
- Peptide Label: isoform X1
- UniProtKB: A0A1L1SSA4 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_011240750   ⟸   XM_011242448
- Peptide Label: isoform X9
- Sequence:
RefSeq Acc Id: XP_030100079   ⟸   XM_030244219
- Peptide Label: isoform X1
- UniProtKB: A0A1L1SSA4 (UniProtKB/TrEMBL)
Ensembl Acc Id: ENSMUSP00000149347   ⟸   ENSMUST00000217554
Ensembl Acc Id: ENSMUSP00000117344   ⟸   ENSMUST00000132430
Ensembl Acc Id: ENSMUSP00000149815   ⟸   ENSMUST00000213154
Ensembl Acc Id: ENSMUSP00000150742   ⟸   ENSMUST00000216284
Ensembl Acc Id: ENSMUSP00000114053   ⟸   ENSMUST00000117194
Ensembl Acc Id: ENSMUSP00000149980   ⟸   ENSMUST00000214868
RefSeq Acc Id: XP_036010714   ⟸   XM_036154821
- Peptide Label: isoform X8
- UniProtKB: Q8BSI0 (UniProtKB/Swiss-Prot),   Q8BQD2 (UniProtKB/Swiss-Prot),   Q6NZG6 (UniProtKB/Swiss-Prot),   Q5DU05 (UniProtKB/Swiss-Prot),   Q3TYF9 (UniProtKB/Swiss-Prot)
Protein Domains
WW

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q5DU05-F1-model_v2 AlphaFold Q5DU05 1-1446 view protein structure

Promoters
RGD ID:6848385
Promoter ID:MM_ACW:50381
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:ES_Cell
Transcripts:CEP164.HSEP07
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36945,576,391 - 45,576,891 (-)MPROMDB
RGD ID:6844313
Promoter ID:MM_KWN:57197
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   Kidney,   MEF_B4
Transcripts:ENSMUST00000117194,   UC009PGD.1,   UC009PGF.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36945,636,419 - 45,636,919 (-)MPROMDB
RGD ID:8669458
Promoter ID:EPDNEW_M12760
Type:initiation region
Name:Cep164_1
Description:Mus musculus centrosomal protein 164 , mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38945,828,642 - 45,828,702EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:2384878 AgrOrtholog
Ensembl Genes ENSMUSG00000043987 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000117194 ENTREZGENE
  ENSMUST00000117194.8 UniProtKB/TrEMBL
  ENSMUST00000132430.2 UniProtKB/TrEMBL
  ENSMUST00000213154 ENTREZGENE
  ENSMUST00000213154.2 UniProtKB/TrEMBL
  ENSMUST00000214868.2 UniProtKB/TrEMBL
  ENSMUST00000216284.2 UniProtKB/TrEMBL
  ENSMUST00000217554.2 UniProtKB/TrEMBL
Gene3D-CATH Photosystem I PsaD, reaction center subunit II UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro MT-Golgi_org_protein UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  WW_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  WW_dom_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:214552 UniProtKB/TrEMBL
MGD MGI:2384878 ENTREZGENE
NCBI Gene Cep164 ENTREZGENE
PANTHER CENTROSOMAL PROTEIN OF 164 KDA UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  NUCLEAR MITOTIC APPARATUS PROTEIN 1-RELATED UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Cep164 PhenoGen
PROSITE WW_DOMAIN_2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
SMART SM00456 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF51045 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt A0A1L1SR80_MOUSE UniProtKB/TrEMBL
  A0A1L1SSA4 ENTREZGENE, UniProtKB/TrEMBL
  A0A1L1SSP5_MOUSE UniProtKB/TrEMBL
  A0A1L1SUF9_MOUSE UniProtKB/TrEMBL
  CE164_MOUSE UniProtKB/Swiss-Prot
  D3YVU3 ENTREZGENE, UniProtKB/TrEMBL
  F7AUV3_MOUSE UniProtKB/TrEMBL
  Q3TYF9 ENTREZGENE
  Q5DU05 ENTREZGENE
  Q6NZG6 ENTREZGENE
  Q8BQD2 ENTREZGENE
  Q8BSI0 ENTREZGENE
UniProt Secondary Q3TYF9 UniProtKB/Swiss-Prot
  Q6NZG6 UniProtKB/Swiss-Prot
  Q8BQD2 UniProtKB/Swiss-Prot
  Q8BSI0 UniProtKB/Swiss-Prot


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2024-08-26 Cep164  centrosomal protein 164  BC027092  cDNA sequence BC027092  Symbol and/or name updated 27372883 PROVISIONAL
2024-08-21 BC027092  cDNA sequence BC027092  Cep164  centrosomal protein 164  Symbol and/or name change 5135510 APPROVED