Zfp639 (zinc finger protein 639) - Rat Genome Database

Send us a Message



Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Gene: Zfp639 (zinc finger protein 639) Mus musculus
Analyze
Symbol: Zfp639
Name: zinc finger protein 639
RGD ID: 1623201
MGI Page MGI
Description: Predicted to enable DNA-binding transcription activator activity, RNA polymerase II-specific and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Predicted to be involved in several processes, including negative regulation by host of viral transcription; positive regulation by host of viral transcription; and regulation of DNA-templated transcription. Predicted to be located in nucleoplasm. Is expressed in several structures, including central nervous system; early conceptus; female reproductive system; retina nuclear layer; and urinary system. Orthologous to human ZNF639 (zinc finger protein 639).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: 6230400O18Rik; ANC-2H01; ZASC1; zinc finger protein ZASC1; Znf639
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39332,564,355 - 32,574,982 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl332,564,408 - 32,574,982 (+)EnsemblGRCm39 Ensembl
GRCm38332,510,264 - 32,520,833 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl332,510,259 - 32,520,833 (+)EnsemblGRCm38mm10GRCm38
MGSCv37332,409,472 - 32,419,755 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36332,702,141 - 32,712,285 (+)NCBIMGSCv36mm8
Celera332,420,669 - 32,430,956 (+)NCBICelera
Cytogenetic Map3A3NCBI
cM Map315.75NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
References

References - curated
# Reference Title Reference Citation
1. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:8889548   PMID:10349636   PMID:10922068   PMID:11042159   PMID:11076861   PMID:11217851   PMID:12466851   PMID:12477932   PMID:14610273   PMID:15226823   PMID:15618518   PMID:15782199  
PMID:16141072   PMID:16141073   PMID:16182284   PMID:18287559   PMID:18799693   PMID:20059953   PMID:20412781   PMID:21873635   PMID:22988430   PMID:23617998  


Genomics

Comparative Map Data
Zfp639
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39332,564,355 - 32,574,982 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl332,564,408 - 32,574,982 (+)EnsemblGRCm39 Ensembl
GRCm38332,510,264 - 32,520,833 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl332,510,259 - 32,520,833 (+)EnsemblGRCm38mm10GRCm38
MGSCv37332,409,472 - 32,419,755 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36332,702,141 - 32,712,285 (+)NCBIMGSCv36mm8
Celera332,420,669 - 32,430,956 (+)NCBICelera
Cytogenetic Map3A3NCBI
cM Map315.75NCBI
ZNF639
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh383179,322,876 - 179,338,583 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl3179,323,031 - 179,338,583 (+)EnsemblGRCh38hg38GRCh38
GRCh373179,040,664 - 179,056,371 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 363180,524,245 - 180,536,014 (+)NCBINCBI36Build 36hg18NCBI36
Build 343180,524,252 - 180,536,022NCBI
Celera3177,472,559 - 177,484,329 (+)NCBICelera
Cytogenetic Map3q26.33NCBI
HuRef3176,444,494 - 176,456,448 (+)NCBIHuRef
CHM1_13179,004,438 - 179,016,198 (+)NCBICHM1_1
T2T-CHM13v2.03182,126,717 - 182,142,424 (+)NCBIT2T-CHM13v2.0
Zfp639
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr82117,220,806 - 117,231,132 (+)NCBIGRCr8
mRatBN7.22115,292,431 - 115,305,798 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl2115,292,516 - 115,303,628 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx2121,908,616 - 121,916,521 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.02120,021,250 - 120,029,155 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.02114,722,328 - 114,730,177 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.02118,906,479 - 118,917,491 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl2118,910,587 - 118,916,563 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.02138,564,008 - 138,574,696 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.42118,718,400 - 118,725,490 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera2110,405,404 - 110,413,313 (+)NCBICelera
Cytogenetic Map2q24NCBI
Znf639
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554208,516,973 - 8,522,629 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554208,513,192 - 8,522,689 (+)NCBIChiLan1.0ChiLan1.0
ZNF639
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v22177,189,565 - 177,202,374 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan13177,194,303 - 177,207,091 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v03176,353,400 - 176,366,142 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.13184,527,753 - 184,539,890 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl3184,533,061 - 184,539,270 (+)Ensemblpanpan1.1panPan2
ZNF639
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.13412,767,067 - 12,775,995 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl3412,766,681 - 12,775,792 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha3416,909,762 - 16,920,835 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.03412,663,418 - 12,674,506 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl3412,664,030 - 12,675,266 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.13412,716,049 - 12,727,098 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.03412,698,299 - 12,709,384 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.03412,937,783 - 12,948,869 (+)NCBIUU_Cfam_GSD_1.0
Znf639
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405602109,378,770 - 109,389,083 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365663,831,942 - 3,837,957 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365663,831,234 - 3,841,972 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
ZNF639
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl13117,370,544 - 117,384,041 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.113117,370,496 - 117,384,046 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
ZNF639
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11510,102,800 - 10,107,108 (-)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_02366606318,984,329 - 18,996,260 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Znf639
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462473057,078,794 - 57,084,254 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462473057,074,036 - 57,087,489 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Zfp639
392 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:27
Count of miRNA genes:27
Interacting mature miRNAs:27
Transcripts:ENSMUST00000029203
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
4142399Aec1_mautoimmune exocrinopathy 1 (mouse)Not determined7586174102690034Mouse
4141116Lgaq4_mlate growth adjusted QTL 4 (mouse)Not determined1024922183184946Mouse
4141563Lgq3_mlate growth QTL 3 (mouse)Not determined1024922183184946Mouse
1357584Splq6_mspleen weight QTL 6 (mouse)Not determined31024922183184946Mouse
1301114Ssial2_msusceptibility to sialadenitis 2 (mouse)Not determined32017486254180103Mouse
26884436Zlq3_mzygomatic length QTL 3, 10 week (mouse)33265060142405761Mouse
26884427Cvht4_mcranial vault height 4, 10 week (mouse)316054164109707316Mouse
1300961Bh4p_mbar holding four paws (mouse)Not determined33183785465837997Mouse
4142092Tgq13_mtriglyceride QTL 13 (mouse)Not determined1828816852288168Mouse
1357440Hrtpq1_mheart weight percentage QTL 1 (mouse)Not determined31024922183184946Mouse
4141255W10q3_mweight 10 weeks QTL 3 (mouse)Not determined1024922183184946Mouse
1558925Hivan1_mHIV-associated nephropathy 1 (mouse)Not determined3758617468716946Mouse
39128206Lwq18_mliver weight QTL 18 (mouse)31024922183184946Mouse
13207570Tcq12_mtotal cholesterol QTL 12 (mouse)316504164130163649Mouse
1302056Orgwq4_morgan weight QTL 4 (mouse)Not determined330067588147304689Mouse
1300559Thypr3_mthymocyte proliferative response 3 (mouse)Not determined3452541938525519Mouse
26884422Cvht7_mcranial vault height 7, 16 week (mouse)328954149118893649Mouse
1301358Eae20_mexperimental allergic encephalomyelitis 20 (mouse)Not determined31163045345630591Mouse

Markers in Region
AI406622  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38332,520,399 - 32,520,636UniSTSGRCm38
MGSCv37332,419,321 - 32,419,558UniSTSGRCm37
Celera332,430,522 - 32,430,759UniSTS
Cytogenetic Map3BUniSTS


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001161818 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001356625 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001429053 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001429054 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001429055 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001429056 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001429057 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_144519 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006535527 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006535529 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006535530 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030252771 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030252772 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036163250 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036163252 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC130281 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK007493 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK049934 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK076145 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK076837 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK078000 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK186322 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK201027 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK214474 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK219010 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AY736186 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC003941 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC042660 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466530 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CO042682 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DQ323614 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSMUST00000029203   ⟹   ENSMUSP00000029203
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl332,569,444 - 32,574,834 (+)Ensembl
GRCm38.p6 Ensembl332,515,295 - 32,520,685 (+)Ensembl
Ensembl Acc Id: ENSMUST00000191783   ⟹   ENSMUSP00000141446
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl332,564,684 - 32,574,892 (+)Ensembl
GRCm38.p6 Ensembl332,510,535 - 32,520,743 (+)Ensembl
Ensembl Acc Id: ENSMUST00000192985   ⟹   ENSMUSP00000141559
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl332,567,149 - 32,573,717 (+)Ensembl
GRCm38.p6 Ensembl332,513,000 - 32,519,568 (+)Ensembl
Ensembl Acc Id: ENSMUST00000193119   ⟹   ENSMUSP00000142244
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl332,564,813 - 32,573,715 (+)Ensembl
GRCm38.p6 Ensembl332,510,664 - 32,519,566 (+)Ensembl
Ensembl Acc Id: ENSMUST00000193287   ⟹   ENSMUSP00000141341
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl332,564,408 - 32,574,982 (+)Ensembl
GRCm38.p6 Ensembl332,510,259 - 32,520,833 (+)Ensembl
Ensembl Acc Id: ENSMUST00000193290
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl332,572,948 - 32,573,709 (+)Ensembl
GRCm38.p6 Ensembl332,518,799 - 32,519,560 (+)Ensembl
Ensembl Acc Id: ENSMUST00000193789   ⟹   ENSMUSP00000142029
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl332,571,229 - 32,574,666 (+)Ensembl
GRCm38.p6 Ensembl332,517,080 - 32,520,517 (+)Ensembl
Ensembl Acc Id: ENSMUST00000194126
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl332,566,327 - 32,573,778 (+)Ensembl
GRCm38.p6 Ensembl332,512,178 - 32,519,629 (+)Ensembl
Ensembl Acc Id: ENSMUST00000194821
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl332,565,045 - 32,567,324 (+)Ensembl
GRCm38.p6 Ensembl332,510,896 - 32,513,175 (+)Ensembl
RefSeq Acc Id: NM_001161818   ⟹   NP_001155290
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39332,564,699 - 32,574,982 (+)NCBI
GRCm38332,510,550 - 32,520,833 (+)ENTREZGENE
MGSCv37332,409,472 - 32,419,755 (+)RGD
Celera332,420,669 - 32,430,956 (+)RGD
cM Map3 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_001356625   ⟹   NP_001343554
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39332,564,741 - 32,574,982 (+)NCBI
GRCm38332,510,592 - 32,520,833 (+)NCBI
Sequence:
RefSeq Acc Id: NM_144519   ⟹   NP_653102
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39332,564,741 - 32,574,982 (+)NCBI
GRCm38332,510,592 - 32,520,833 (+)NCBI
MGSCv37332,409,472 - 32,419,755 (+)RGD
Celera332,420,669 - 32,430,956 (+)RGD
cM Map3 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_006535527   ⟹   XP_006535590
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39332,564,704 - 32,574,915 (+)NCBI
GRCm38332,510,555 - 32,520,780 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006535529   ⟹   XP_006535592
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39332,564,704 - 32,574,915 (+)NCBI
GRCm38332,510,555 - 32,520,780 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006535530   ⟹   XP_006535593
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39332,564,888 - 32,574,929 (+)NCBI
GRCm38332,510,598 - 32,520,780 (+)NCBI
Sequence:
RefSeq Acc Id: XM_030252771   ⟹   XP_030108631
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39332,564,729 - 32,574,929 (+)NCBI
GRCm38332,510,598 - 32,520,780 (+)NCBI
Sequence:
RefSeq Acc Id: XM_030252772   ⟹   XP_030108632
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39332,564,413 - 32,574,929 (+)NCBI
GRCm38332,510,264 - 32,520,780 (+)NCBI
Sequence:
RefSeq Acc Id: XM_036163250   ⟹   XP_036019143
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39332,564,742 - 32,574,915 (+)NCBI
Sequence:
RefSeq Acc Id: XM_036163252   ⟹   XP_036019145
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39332,564,355 - 32,574,929 (+)NCBI
Sequence:
Protein Sequences
Protein RefSeqs NP_001155290 (Get FASTA)   NCBI Sequence Viewer  
  NP_001343554 (Get FASTA)   NCBI Sequence Viewer  
  NP_001415982 (Get FASTA)   NCBI Sequence Viewer  
  NP_001415983 (Get FASTA)   NCBI Sequence Viewer  
  NP_001415984 (Get FASTA)   NCBI Sequence Viewer  
  NP_001415985 (Get FASTA)   NCBI Sequence Viewer  
  NP_001415986 (Get FASTA)   NCBI Sequence Viewer  
  NP_653102 (Get FASTA)   NCBI Sequence Viewer  
  XP_006535590 (Get FASTA)   NCBI Sequence Viewer  
  XP_006535592 (Get FASTA)   NCBI Sequence Viewer  
  XP_006535593 (Get FASTA)   NCBI Sequence Viewer  
  XP_030108631 (Get FASTA)   NCBI Sequence Viewer  
  XP_030108632 (Get FASTA)   NCBI Sequence Viewer  
  XP_036019143 (Get FASTA)   NCBI Sequence Viewer  
  XP_036019145 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAH03941 (Get FASTA)   NCBI Sequence Viewer  
  AAH42660 (Get FASTA)   NCBI Sequence Viewer  
  AAU85844 (Get FASTA)   NCBI Sequence Viewer  
  ABD27861 (Get FASTA)   NCBI Sequence Viewer  
  BAC25175 (Get FASTA)   NCBI Sequence Viewer  
  BAC33991 (Get FASTA)   NCBI Sequence Viewer  
  BAC36215 (Get FASTA)   NCBI Sequence Viewer  
  BAC36501 (Get FASTA)   NCBI Sequence Viewer  
  BAC37096 (Get FASTA)   NCBI Sequence Viewer  
  EDL34991 (Get FASTA)   NCBI Sequence Viewer  
  EDL34992 (Get FASTA)   NCBI Sequence Viewer  
  EDL34993 (Get FASTA)   NCBI Sequence Viewer  
  EDL34994 (Get FASTA)   NCBI Sequence Viewer  
  EDL34995 (Get FASTA)   NCBI Sequence Viewer  
  EDL34996 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSMUSP00000029203
  ENSMUSP00000029203.8
  ENSMUSP00000141341
  ENSMUSP00000141341.2
  ENSMUSP00000141446
  ENSMUSP00000141446.2
  ENSMUSP00000141559.2
  ENSMUSP00000142029.2
  ENSMUSP00000142244.2
GenBank Protein Q99KZ6 (Get FASTA)   NCBI Sequence Viewer  
RefSeq Acc Id: NP_653102   ⟸   NM_144519
- UniProtKB: A9X400 (UniProtKB/Swiss-Prot),   Q8BWU9 (UniProtKB/Swiss-Prot),   Q99KZ6 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001155290   ⟸   NM_001161818
- UniProtKB: A9X400 (UniProtKB/Swiss-Prot),   Q8BWU9 (UniProtKB/Swiss-Prot),   Q99KZ6 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_006535592   ⟸   XM_006535529
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_006535590   ⟸   XM_006535527
- Peptide Label: isoform X1
- UniProtKB: A9X400 (UniProtKB/Swiss-Prot),   Q8BWU9 (UniProtKB/Swiss-Prot),   Q99KZ6 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_006535593   ⟸   XM_006535530
- Peptide Label: isoform X2
- UniProtKB: Q80UZ3 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_030108632   ⟸   XM_030252772
- Peptide Label: isoform X2
RefSeq Acc Id: NP_001343554   ⟸   NM_001356625
- UniProtKB: Q99KZ6 (UniProtKB/Swiss-Prot),   A9X400 (UniProtKB/Swiss-Prot),   Q8BWU9 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: XP_030108631   ⟸   XM_030252771
- Peptide Label: isoform X2
Ensembl Acc Id: ENSMUSP00000029203   ⟸   ENSMUST00000029203
Ensembl Acc Id: ENSMUSP00000141446   ⟸   ENSMUST00000191783
Ensembl Acc Id: ENSMUSP00000142029   ⟸   ENSMUST00000193789
Ensembl Acc Id: ENSMUSP00000141341   ⟸   ENSMUST00000193287
Ensembl Acc Id: ENSMUSP00000142244   ⟸   ENSMUST00000193119
Ensembl Acc Id: ENSMUSP00000141559   ⟸   ENSMUST00000192985
RefSeq Acc Id: XP_036019145   ⟸   XM_036163252
- Peptide Label: isoform X2
RefSeq Acc Id: XP_036019143   ⟸   XM_036163250
- Peptide Label: isoform X1
Protein Domains
C2H2-type

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q99KZ6-F1-model_v2 AlphaFold Q99KZ6 1-485 view protein structure

Promoters
RGD ID:6834641
Promoter ID:MM_KWN:33997
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day0,   3T3L1_Day1,   3T3L1_Day2,   3T3L1_Day3,   3T3L1_Day4,   3T3L1_Day6,   BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   ES_Cell,   Kidney,   Liver,   Lung,   MEF_B4,   MEF_B6,   Spleen
Transcripts:NM_001161818,   NM_144519
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36332,409,226 - 32,409,726 (+)MPROMDB
RGD ID:6880444
Promoter ID:EPDNEW_M3672
Type:initiation region
Name:Zfp639_1
Description:Mus musculus zinc finger protein 639 , transcript variant 2,mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38332,510,550 - 32,510,610EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:1915028 AgrOrtholog
Ensembl Genes ENSMUSG00000027667 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000029203 ENTREZGENE
  ENSMUST00000029203.13 UniProtKB/Swiss-Prot
  ENSMUST00000191783 ENTREZGENE
  ENSMUST00000191783.6 UniProtKB/Swiss-Prot
  ENSMUST00000192985.6 UniProtKB/TrEMBL
  ENSMUST00000193119.6 UniProtKB/TrEMBL
  ENSMUST00000193287 ENTREZGENE
  ENSMUST00000193287.6 UniProtKB/Swiss-Prot
  ENSMUST00000193789.2 UniProtKB/TrEMBL
Gene3D-CATH Classic Zinc Finger UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro ZnF_C2H2-type_TF UniProtKB/Swiss-Prot
  Znf_C2H2_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Znf_C2H2_type UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:67778 UniProtKB/Swiss-Prot
MGD MGI:1915028 ENTREZGENE
NCBI Gene 67778 ENTREZGENE
PANTHER C2H2-TYPE DOMAIN-CONTAINING PROTEIN-RELATED UniProtKB/Swiss-Prot
  TRANSCRIPTIONAL REPRESSOR CTCFL-RELATED UniProtKB/Swiss-Prot
  ZINC FINGER PROTEIN UniProtKB/TrEMBL
  ZINC FINGER Y-CHROMOSOMAL PROTEIN 1 UniProtKB/TrEMBL
Pfam zf-C2H2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Zfp639 PhenoGen
PROSITE ZINC_FINGER_C2H2_1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  ZINC_FINGER_C2H2_2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
SMART ZnF_C2H2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF57667 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt A0A0A6YWH9_MOUSE UniProtKB/TrEMBL
  A0A0A6YXK4_MOUSE UniProtKB/TrEMBL
  A0A0A6YY23_MOUSE UniProtKB/TrEMBL
  A9X400 ENTREZGENE
  Q80UZ3 ENTREZGENE, UniProtKB/TrEMBL
  Q8BWU9 ENTREZGENE
  Q99KZ6 ENTREZGENE, UniProtKB/Swiss-Prot
UniProt Secondary A9X400 UniProtKB/Swiss-Prot
  Q8BWU9 UniProtKB/Swiss-Prot