Bicd2 (BICD cargo adaptor 2) - Rat Genome Database

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Gene: Bicd2 (BICD cargo adaptor 2) Mus musculus
Analyze
Symbol: Bicd2
Name: BICD cargo adaptor 2
RGD ID: 1623107
MGI Page MGI
Description: Enables several functions, including dynactin binding activity; dynein complex binding activity; and dynein light intermediate chain binding activity. Involved in several processes, including microtubule anchoring at microtubule organizing center; minus-end-directed organelle transport along microtubule; and retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum. Acts upstream of or within microtubule-based movement. Located in Golgi apparatus and cytoplasmic vesicle. Is expressed in several structures, including central nervous system; dorsal root ganglion; olfactory epithelium; and retina. Human ortholog(s) of this gene implicated in spinal muscular atrophy with lower extremity predominant 2A and spinal muscular atrophy with lower extremity predominant 2B. Orthologous to human BICD2 (BICD cargo adaptor 2).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: 0610027D24Rik; 1110005D12Rik; AA408834; bic-D 2; bicaudal D homolog 2; bicaudal D homolog 2 (Drosophila); KIAA0699; mKIAA0699; protein bicaudal D homolog 2
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391349,495,025 - 49,540,502 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1349,495,061 - 49,540,502 (+)EnsemblGRCm39 Ensembl
GRCm381349,341,549 - 49,387,026 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1349,341,585 - 49,387,026 (+)EnsemblGRCm38mm10GRCm38
MGSCv371349,436,918 - 49,482,394 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361349,353,486 - 49,398,962 (+)NCBIMGSCv36mm8
Celera1350,431,086 - 50,476,523 (+)NCBICelera
Cytogenetic Map13A5NCBI
cM Map1325.22NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component
annulate lamellae  (ISO,ISS)
centrosome  (IEA,ISO)
cytoplasm  (ISO)
cytoplasmic vesicle  (IDA)
cytosol  (IBA,IEA,ISO)
Golgi apparatus  (IBA,IDA,ISO)
nuclear envelope  (ISO,ISS)
nuclear pore  (ISO,ISS)
plasma membrane  (IEA,ISO)

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. OMIM Disease Annotation Pipeline OMIM Disease Annotation Pipeline
2. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
3. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:8889548   PMID:10349636   PMID:10922068   PMID:11042159   PMID:11076861   PMID:11217851   PMID:11483508   PMID:12447383   PMID:12466851   PMID:12477932   PMID:12520002   PMID:12522145  
PMID:12693553   PMID:15489334   PMID:15747579   PMID:15782199   PMID:16141072   PMID:16141073   PMID:16602821   PMID:18579581   PMID:19521500   PMID:19825938   PMID:20360680   PMID:20386726  
PMID:21267068   PMID:21677750   PMID:21873635   PMID:22956769   PMID:24614806   PMID:25272277   PMID:25962623   PMID:26792178   PMID:28576829   PMID:31655624   PMID:31904480   PMID:32079660  
PMID:32183910   PMID:32325033   PMID:32554809   PMID:33378226   PMID:35858435   PMID:36417873  


Genomics

Comparative Map Data
Bicd2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391349,495,025 - 49,540,502 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1349,495,061 - 49,540,502 (+)EnsemblGRCm39 Ensembl
GRCm381349,341,549 - 49,387,026 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1349,341,585 - 49,387,026 (+)EnsemblGRCm38mm10GRCm38
MGSCv371349,436,918 - 49,482,394 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361349,353,486 - 49,398,962 (+)NCBIMGSCv36mm8
Celera1350,431,086 - 50,476,523 (+)NCBICelera
Cytogenetic Map13A5NCBI
cM Map1325.22NCBI
BICD2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38992,711,363 - 92,764,833 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl992,711,363 - 92,764,833 (-)EnsemblGRCh38hg38GRCh38
GRCh37995,473,645 - 95,527,115 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36994,513,466 - 94,566,904 (-)NCBINCBI36Build 36hg18NCBI36
Build 34992,553,199 - 92,606,638NCBI
Celera965,915,700 - 65,969,136 (-)NCBICelera
Cytogenetic Map9q22.31NCBI
HuRef965,151,961 - 65,205,073 (-)NCBIHuRef
CHM1_1995,620,081 - 95,673,514 (-)NCBICHM1_1
T2T-CHM13v2.09104,877,924 - 104,931,411 (-)NCBIT2T-CHM13v2.0
Bicd2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81715,449,011 - 15,511,423 (-)NCBIGRCr8
mRatBN7.21715,259,773 - 15,304,889 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1715,259,773 - 15,304,889 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1715,146,828 - 15,191,665 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01716,751,888 - 16,796,726 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01715,073,624 - 15,118,460 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01715,673,649 - 15,718,035 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1715,673,650 - 15,718,035 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01717,731,018 - 17,775,611 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41721,214,977 - 21,260,729 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11721,214,995 - 21,260,709 (-)NCBI
Celera1714,990,557 - 15,035,504 (-)NCBICelera
Cytogenetic Map17p14NCBI
Bicd2
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049555155,061,005 - 5,103,179 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049555155,060,176 - 5,105,298 (+)NCBIChiLan1.0ChiLan1.0
BICD2
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21146,660,629 - 46,717,041 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1946,663,017 - 46,719,493 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0963,834,515 - 63,890,904 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1991,905,982 - 91,959,186 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl991,909,771 - 91,959,131 (-)Ensemblpanpan1.1panPan2
BICD2
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1198,697,050 - 98,736,296 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl198,697,075 - 98,734,240 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha199,091,059 - 99,130,138 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0199,313,974 - 99,353,079 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl199,313,980 - 99,353,078 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1198,927,112 - 98,966,197 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0198,662,724 - 98,701,758 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0199,418,306 - 99,457,372 (+)NCBIUU_Cfam_GSD_1.0
Bicd2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_0244049448,071,268 - 8,119,191 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049364872,255,882 - 2,335,731 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049364872,287,736 - 2,335,674 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
BICD2
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl342,393,277 - 42,456,782 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1342,393,270 - 42,456,821 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2343,627,163 - 43,647,661 (-)NCBISscrofa10.2Sscrofa10.2susScr3
BICD2
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.112103,232,602 - 103,281,317 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl12103,232,327 - 103,281,288 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366603891,504,437 - 91,553,420 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Bicd2
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248683,598,688 - 3,650,731 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046248683,598,523 - 3,649,641 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Bicd2
824 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:2269
Count of miRNA genes:633
Interacting mature miRNAs:751
Transcripts:ENSMUST00000048544, ENSMUST00000110084, ENSMUST00000110085
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1300561Heal7_mwound healing/regeneration 7 (mouse)Not determined133614482070144904Mouse
1357591Tesq1_mtestis weight QTL 1 (mouse)Not determined132061551255720517Mouse
1301015Sysbp2_msystolic blood pressure 2 (mouse)Not determined132047761259821605Mouse
4142331Bxs6_mBXSB/MpJ autoimmune nephritis 6 (mouse)Not determined4521044283744746Mouse
12738439Twq4_mtestis weight QTL 4 (mouse)133112911065129110Mouse
4142009Pregq3_mpregnancy QTL 3 (mouse)Not determined132061551272385189Mouse
1357587Pfat3_mpredicted fat percentage 3 (mouse)Not determined133610153070101640Mouse
10401111Pgia40_mproteoglycan induced arthritis 40 (mouse)Not determined132791846961918560Mouse
10412109Bxs7_mBXSB/MpJ autoimmune nephritis 7 (mouse)Not determined134521044283744746Mouse
10412235Scgq5_mspontaneous crescentic glomerulonephritis QTL 5 (mouse)Not determined133606090896239162Mouse
10755517Chol15_mcholesterol 15 (mouse)133096946764969467Mouse
15039353Nmrs35_mNAFLD-associated magnetic resonance shift 35 (mouse)134058825374588253Mouse
1302157Bwem2_mbody weight day 30 males 2 (mouse)Not determined133962924973629397Mouse
13463469Gssq1_mglomerulosclerosis severity QTL 1 (mouse)131906090853061050Mouse
1301299Sluc23_msusceptibility to lung cancer 23 (mouse)Not determined133492194368922081Mouse
12880423V25Dq7_mvitamin D inactive form serum level QTL 7 (mouse)131958398353583983Mouse
1558898Hpi1_mhapatic PMN infiltration 1 (mouse)Not determined13441402553101640Mouse
4142489Ath25_matherosclerosis 25 (mouse)Not determined2583652959836529Mouse
10755533Chol18_mcholesterol 18 (mouse)133096946764969467Mouse
1300985Bmd13_mbone mineral density 13 (mouse)Not determined133962924973629397Mouse
1301880Hypt_mhypertension (mouse)Not determined131815679252156924Mouse
10045618Heal17_mwound healing/regeneration 17 (mouse)Not determined132074693954747056Mouse
10045621Heal21_mwound healing/regeneration 21 (mouse)Not determined132821737962217515Mouse
1300862Cfbw5_mcystic fibrosis body weight 5 (mouse)Not determined133872035872720517Mouse
1300668Pas10_mpulmonary adenoma susceptibility 10 (mouse)Not determined134148904275489158Mouse
26884393Humsd7_mhumerus midshaft diameter 7, 16 week (mouse)13395000076048119Mouse
1300710Pcd4ts2_mp-glycoprotein positive CD4 T cell subset 2 (mouse)Not determined132821044262210544Mouse
1301734Acsns2_mAngiostrongylus costaricensis nematode susceptibility 2 (mouse)Not determined133610153070101640Mouse
26884396Humsd4_mhumerus midshaft diameter 4, 10 week (mouse)134785347673148119Mouse
14696729Kidlq2_mkidney weight, left QTL 2 (mouse)133134473665344736Mouse
12738427Lfibq24_mliver fibrosis QTL 24 (mouse)134425810752758667Mouse
1301801Cpfd5_mcerebellum pattern fissures (mouse)Not determined133962924973629397Mouse
4142147Mvwf4_mmodifier of von Willebrand factor 4 (mouse)Not determined20477612112898424Mouse
1357802Vtbt15_mvertebral trabecular bone trait 15 (mouse)Not determined132821737962217515Mouse

Markers in Region
RH124775  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381349,386,834 - 49,386,981UniSTSGRCm38
MGSCv371349,482,203 - 49,482,350UniSTSGRCm37
Celera1350,476,332 - 50,476,479UniSTS
Cytogenetic Map13A5UniSTS
G06234  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381349,386,744 - 49,387,005UniSTSGRCm38
MGSCv371349,482,113 - 49,482,374UniSTSGRCm37
Celera1350,476,242 - 50,476,503UniSTS
Cytogenetic Map13A5UniSTS


Expression

RNA-SEQ Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001039179 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001039180 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_029791 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011244429 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC132245 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AJ250106 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK002683 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK003456 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK031893 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK122348 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK156407 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK171300 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK185446 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK189233 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK208528 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BB148091 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC032198 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BP775855 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CF538535 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466546 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSMUST00000048544   ⟹   ENSMUSP00000039394
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1349,495,061 - 49,540,495 (+)Ensembl
GRCm38.p6 Ensembl1349,341,585 - 49,387,019 (+)Ensembl
Ensembl Acc Id: ENSMUST00000110084   ⟹   ENSMUSP00000105711
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1349,495,067 - 49,540,501 (+)Ensembl
GRCm38.p6 Ensembl1349,341,591 - 49,387,025 (+)Ensembl
Ensembl Acc Id: ENSMUST00000110085   ⟹   ENSMUSP00000105712
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1349,495,072 - 49,540,502 (+)Ensembl
GRCm38.p6 Ensembl1349,341,596 - 49,387,026 (+)Ensembl
Ensembl Acc Id: ENSMUST00000220723   ⟹   ENSMUSP00000152090
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1349,536,565 - 49,538,624 (+)Ensembl
GRCm38.p6 Ensembl1349,383,089 - 49,385,148 (+)Ensembl
RefSeq Acc Id: NM_001039179   ⟹   NP_001034268
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391349,495,025 - 49,540,502 (+)NCBI
GRCm381349,341,549 - 49,387,026 (+)NCBI
MGSCv371349,436,918 - 49,482,394 (+)RGD
Celera1350,431,086 - 50,476,524 (+)NCBI
cM Map13 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_001039180   ⟹   NP_001034269
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391349,495,025 - 49,540,502 (+)NCBI
GRCm381349,341,549 - 49,387,026 (+)NCBI
MGSCv371349,436,918 - 49,482,394 (+)RGD
Celera1350,431,086 - 50,476,524 (+)NCBI
cM Map13 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_029791   ⟹   NP_084067
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391349,495,025 - 49,540,502 (+)NCBI
GRCm381349,341,549 - 49,387,026 (+)NCBI
MGSCv371349,436,918 - 49,482,394 (+)RGD
Celera1350,431,086 - 50,476,524 (+)NCBI
cM Map13 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_011244429   ⟹   XP_011242731
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391349,529,495 - 49,540,502 (+)NCBI
GRCm381349,376,018 - 49,387,026 (+)NCBI
Sequence:
RefSeq Acc Id: NP_001034268   ⟸   NM_001039179
- Peptide Label: isoform 1
- UniProtKB: Q3TBD4 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_084067   ⟸   NM_029791
- Peptide Label: isoform 2
- UniProtKB: Q8BTE3 (UniProtKB/Swiss-Prot),   Q80TU1 (UniProtKB/Swiss-Prot),   Q9DCL3 (UniProtKB/Swiss-Prot),   Q921C5 (UniProtKB/Swiss-Prot),   Q3TBD4 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001034269   ⟸   NM_001039180
- Peptide Label: isoform 3
- UniProtKB: D3Z390 (UniProtKB/TrEMBL),   Q3TBD4 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_011242731   ⟸   XM_011244429
- Peptide Label: isoform X1
- Sequence:
Ensembl Acc Id: ENSMUSP00000105711   ⟸   ENSMUST00000110084
Ensembl Acc Id: ENSMUSP00000105712   ⟸   ENSMUST00000110085
Ensembl Acc Id: ENSMUSP00000039394   ⟸   ENSMUST00000048544
Ensembl Acc Id: ENSMUSP00000152090   ⟸   ENSMUST00000220723

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q921C5-F1-model_v2 AlphaFold Q921C5 1-820 view protein structure

Promoters
RGD ID:8680300
Promoter ID:EPDNEW_M18181
Type:initiation region
Name:Bicd2_1
Description:Mus musculus BICD cargo adaptor 2 , transcript variant 1, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm381349,341,565 - 49,341,625EPDNEW
RGD ID:6823548
Promoter ID:MM_KWN:14040
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day0,   3T3L1_Day1,   3T3L1_Day3,   BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   ES_Cell,   Kidney,   Liver,   Lung,   MEF_B4,   MEF_B6,   Spleen
Transcripts:AK018999_1700129O19RIK,   NM_001039179,   NM_001039180,   NM_029791
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361349,436,596 - 49,437,096 (-)MPROMDB
RGD ID:6823734
Promoter ID:MM_KWN:14041
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:BoneMarrow_2Hour
Transcripts:ENSMUST00000110084
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361349,464,576 - 49,465,076 (+)MPROMDB
RGD ID:6847028
Promoter ID:MM_ACW:13185
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:BoneMarrow_2Hour,   Brain,   Kidney,   Liver
Transcripts:BICD2.DSEP07
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361349,478,436 - 49,478,936 (+)MPROMDB
RGD ID:6847026
Promoter ID:MM_ACW:13186
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Lung
Transcripts:BICD2.ESEP07-UNSPLICED
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361349,482,146 - 49,482,646 (+)MPROMDB

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:1924145 AgrOrtholog
Ensembl Genes ENSMUSG00000037933 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000048544 ENTREZGENE
  ENSMUST00000048544.14 UniProtKB/Swiss-Prot
  ENSMUST00000110084 ENTREZGENE
  ENSMUST00000110084.4 UniProtKB/TrEMBL
  ENSMUST00000110085 ENTREZGENE
  ENSMUST00000110085.11 UniProtKB/Swiss-Prot
  ENSMUST00000220723.2 UniProtKB/TrEMBL
Gene3D-CATH 6.10.250.2470 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro BICD UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:76895 UniProtKB/Swiss-Prot
MGD MGI:1924145 ENTREZGENE
NCBI Gene 76895 ENTREZGENE
PANTHER PROTEIN BICAUDAL D HOMOLOG 2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PTHR31233 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam BicD UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Bicd2 PhenoGen
UniProt A0A1Y7VIQ5_MOUSE UniProtKB/TrEMBL
  BICD2_MOUSE UniProtKB/Swiss-Prot
  D3Z390 ENTREZGENE, UniProtKB/TrEMBL
  Q3TBD4 ENTREZGENE, UniProtKB/TrEMBL
  Q80TU1 ENTREZGENE
  Q8BTE3 ENTREZGENE
  Q921C5 ENTREZGENE
  Q9DCL3 ENTREZGENE
UniProt Secondary Q80TU1 UniProtKB/Swiss-Prot
  Q8BTE3 UniProtKB/Swiss-Prot
  Q9DCL3 UniProtKB/Swiss-Prot


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2017-10-31 Bicd2  BICD cargo adaptor 2    bicaudal D homolog 2 (Drosophila)  Symbol and/or name change 5135510 APPROVED