Calml4 (calmodulin-like 4) - Rat Genome Database

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Gene: Calml4 (calmodulin-like 4) Mus musculus
Analyze
Symbol: Calml4
Name: calmodulin-like 4
RGD ID: 1622245
MGI Page MGI
Description: Predicted to enable calcium ion binding activity; enzyme regulator activity; and myosin head/neck binding activity. Predicted to be involved in brush border assembly and microtubule cytoskeleton organization. Predicted to be located in microvillus. Predicted to be active in cytoplasm. Is expressed in several structures, including brain ventricle and choroid plexus; choroid fissure; ear; forelimb bud; and somite. Orthologous to human CALML4 (calmodulin like 4).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: 2010002G05Rik; CALM-Rel; calmodulin-like protein 4; calmodulin-related
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39962,765,068 - 62,783,203 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl962,765,362 - 62,783,203 (+)EnsemblGRCm39 Ensembl
GRCm38962,857,472 - 62,875,921 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl962,858,080 - 62,875,921 (+)EnsemblGRCm38mm10GRCm38
MGSCv37962,705,911 - 62,723,725 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36962,656,110 - 62,673,924 (+)NCBIMGSCv36mm8
Celera960,083,497 - 60,094,995 (+)NCBICelera
Cytogenetic Map9BNCBI
cM Map933.9NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(-)-demecolcine  (ISO)
(1->4)-beta-D-glucan  (EXP)
1,2-dichloroethane  (EXP)
1,2-dimethylhydrazine  (EXP)
17alpha-ethynylestradiol  (EXP,ISO)
17beta-estradiol  (EXP,ISO)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
3,4-methylenedioxymethamphetamine  (EXP)
3-isobutyl-1-methyl-7H-xanthine  (EXP,ISO)
4,4'-sulfonyldiphenol  (EXP)
4-hydroxyphenyl retinamide  (EXP)
6-propyl-2-thiouracil  (EXP,ISO)
acrylamide  (EXP)
all-trans-retinoic acid  (ISO)
alpha-Zearalanol  (ISO)
amitrole  (ISO)
atrazine  (ISO)
belinostat  (ISO)
benzo[a]pyrene  (EXP,ISO)
beta-lapachone  (ISO)
bisphenol A  (EXP,ISO)
bisphenol F  (EXP,ISO)
carbon nanotube  (EXP)
choline  (EXP)
ciguatoxin CTX1B  (EXP)
cobalt dichloride  (ISO)
copper atom  (ISO)
copper(0)  (ISO)
copper(II) sulfate  (ISO)
Cuprizon  (ISO)
cyclosporin A  (ISO)
dexamethasone  (EXP,ISO)
dibutyl phthalate  (ISO)
dicrotophos  (ISO)
diethylstilbestrol  (ISO)
diiodine  (EXP)
diuron  (ISO)
dorsomorphin  (ISO)
endosulfan  (ISO)
entinostat  (ISO)
ethyl methanesulfonate  (ISO)
fipronil  (ISO)
folic acid  (EXP)
furan  (ISO)
gentamycin  (ISO)
glycidol  (ISO)
glyphosate  (ISO)
indometacin  (ISO)
L-methionine  (EXP)
lead(0)  (ISO)
methimazole  (ISO)
methyl methanesulfonate  (ISO)
methylmercury chloride  (ISO)
N(4)-hydroxycytidine  (EXP)
N-nitrosodiethylamine  (EXP)
O-methyleugenol  (ISO)
oxaliplatin  (ISO)
ozone  (EXP)
paracetamol  (ISO)
perfluorononanoic acid  (ISO)
perfluorooctane-1-sulfonic acid  (EXP)
perfluorooctanoic acid  (ISO)
phenobarbital  (EXP,ISO)
phenylmercury acetate  (ISO)
pirinixic acid  (ISO)
pyrogallol  (EXP)
SB 431542  (ISO)
sodium arsenite  (ISO)
sodium dichromate  (ISO)
sulfadimethoxine  (ISO)
tert-butyl hydroperoxide  (EXP)
tetrachloroethene  (EXP)
tetrachloromethane  (EXP)
thimerosal  (ISO)
thioacetamide  (ISO)
titanium dioxide  (EXP)
topotecan  (ISO)
tributylstannane  (EXP)
troglitazone  (ISO)
urethane  (ISO)
valproic acid  (EXP,ISO)
zoledronic acid  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component
cytoplasm  (IBA)
microvillus  (ISO,ISS)

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:8889548   PMID:10349636   PMID:10922068   PMID:11042159   PMID:11076861   PMID:11217851   PMID:11709547   PMID:12466851   PMID:12477932   PMID:14610273   PMID:16141072   PMID:16141073  
PMID:16602821   PMID:21267068   PMID:21519551   PMID:21677750   PMID:21873635   PMID:26238476   PMID:32209652   PMID:34321999  


Genomics

Comparative Map Data
Calml4
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39962,765,068 - 62,783,203 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl962,765,362 - 62,783,203 (+)EnsemblGRCm39 Ensembl
GRCm38962,857,472 - 62,875,921 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl962,858,080 - 62,875,921 (+)EnsemblGRCm38mm10GRCm38
MGSCv37962,705,911 - 62,723,725 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36962,656,110 - 62,673,924 (+)NCBIMGSCv36mm8
Celera960,083,497 - 60,094,995 (+)NCBICelera
Cytogenetic Map9BNCBI
cM Map933.9NCBI
CALML4
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381568,190,705 - 68,206,110 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1568,190,705 - 68,206,079 (-)EnsemblGRCh38hg38GRCh38
GRCh371568,483,043 - 68,498,448 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361566,270,097 - 66,285,502 (-)NCBINCBI36Build 36hg18NCBI36
Build 341566,270,479 - 66,285,502NCBI
Celera1545,367,956 - 45,383,362 (-)NCBICelera
Cytogenetic Map15q23NCBI
HuRef1545,313,778 - 45,329,162 (-)NCBIHuRef
CHM1_11568,600,995 - 68,616,402 (-)NCBICHM1_1
T2T-CHM13v2.01566,009,455 - 66,024,859 (-)NCBIT2T-CHM13v2.0
Calml4
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8872,218,870 - 72,230,650 (+)NCBIGRCr8
mRatBN7.2863,323,426 - 63,335,234 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl863,323,351 - 63,335,234 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx868,838,506 - 68,850,149 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0867,110,960 - 67,122,603 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0864,980,956 - 64,992,609 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0867,753,279 - 67,765,359 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl867,753,279 - 67,765,358 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0867,482,026 - 67,494,105 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4867,007,122 - 67,018,886 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera862,738,382 - 62,750,146 (+)NCBICelera
Cytogenetic Map8q24NCBI
Calml4
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554507,887,414 - 7,894,143 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554507,886,565 - 7,894,143 (+)NCBIChiLan1.0ChiLan1.0
CALML4
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21657,444,352 - 57,460,549 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11561,618,194 - 61,634,392 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01547,140,272 - 47,155,700 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11565,409,732 - 65,424,852 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1565,409,732 - 65,424,852 (-)Ensemblpanpan1.1panPan2
CALML4
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.13032,234,879 - 32,244,321 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl3032,235,091 - 32,240,008 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha3032,169,539 - 32,179,258 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.03032,430,743 - 32,440,471 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl3032,430,780 - 32,435,698 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.13032,359,011 - 32,368,754 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.03032,420,957 - 32,430,694 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.03032,666,809 - 32,676,532 (-)NCBIUU_Cfam_GSD_1.0
Calml4
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024408640110,210,102 - 110,222,226 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493647128,058,176 - 28,067,442 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_00493647128,058,165 - 28,067,463 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
CALML4
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1166,083,629 - 166,099,593 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11166,089,583 - 166,099,794 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
CALML4
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12615,278,349 - 15,291,934 (+)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_023666048126,176,796 - 126,188,708 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Calml4
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247814,882,136 - 4,888,358 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247814,880,142 - 4,892,829 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Calml4
645 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:234
Count of miRNA genes:107
Interacting mature miRNAs:113
Transcripts:ENSMUST00000034777, ENSMUST00000163820
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1301782Chol11_mcholesterol 11 (mouse)Not determined92929292963293072Mouse
12790986Pcho9_mplasma cholesterol 9 (mouse)93809957572099575Mouse
12790990Tgl7_mtriglyceride 7 (mouse)95455996088559960Mouse
14746993Manh66_mmandible shape 66 (mouse)94981404883814048Mouse
12790992Arlsq1_maortic root lesion size QTL 1 (mouse)93809957572099575Mouse
4141224Dxmod_mdoxorubicin nephropathy modifier (mouse)Not determined49452421101406120Mouse
1301252Etohc3_methanol consumption 3 (mouse)Not determined93503447869034599Mouse
1357709Si5lq3_mserum IGFBP-5 level QTL 3 (mouse)Not determined93311102567111140Mouse
12791002Arlsq2_maortic root lesion size QTL 2 (mouse)93809957572099575Mouse
1301558Stheal8_msoft tissue heal 8 (mouse)Not determined94348071477480860Mouse
1357746Vtbt7_mvertebral trabecular bone trait 7 (mouse)Not determined93073991564740021Mouse
1301172Fembrs6_mfemur breaking strength 6 (mouse)Not determined95902438793024534Mouse
1301435Trigq1_mtriglyceride QTL 1 (mouse)Not determined94442817478428262Mouse
1301051Eae9_msusceptibility to experimental allergic encephalomyelitis 9 (mouse)Not determined94942029863239852Mouse
5491195Mobq8_mmultigenic obesity QTL 8 (mouse)Not determined95936994693370128Mouse
1301049El4_mepilepsy 4 (mouse)Not determined94942029867151448Mouse
1301692Hts_mhypothermia sensitivity (mouse)Not determined93251117266511421Mouse
1558968Tbdr1_mbody temperature response to dietary restriction, QTL 1 (mouse)Not determined93503447869034599Mouse
4141071Ath29_matherosclerosis 29 (mouse)Not determined94041959474607925Mouse
4141323Ptnu3_mproteinuria 3 (mouse)Not determined93288970266889836Mouse
1301287Feml2_mfemur length in high growth mice 2 (mouse)Not determined95750728363207282Mouse
1302180Actd4_mactivity-distance traveled 4 (mouse)Not determined93243456366434857Mouse
1301803Stheal9_msoft tissue heal 9 (mouse)Not determined95902438793024534Mouse
13208563Bmiq8_mbody mass index QTL 8 (mouse)92491129668907282Mouse
4141572Ntta3_mneurotensin transcript abundance 3 (mouse)Not determined4659767165831177Mouse
1301549Bbaa9_mB.burgdorferi-associated arthritis 9 (mouse)Not determined95780504771481754Mouse
1300563Pgia5_mproteoglycan induced arthritis 5 (mouse)Not determined94883105682831177Mouse
13525007Lfhrvq1_mlow frequency time index heart rate varaiblity, QTL 1 (mouse)95878431868556008Mouse
1301456Adip5_madiposity 5 (mouse)Not determined95936994693370128Mouse
1301972Cocrb8_mcocaine related behavior 8 (mouse)Not determined93503447869034599Mouse
1558872Ibdq1_minflammatory bowel disease QTL 1 (mouse)Not determined93397884073439255Mouse
1301184Bdln4_mbody length 4 (mouse)Not determined95015132084151448Mouse
4141676Neogq1_mneonatal growth QTL 1 (mouse)Not determined95780504786121973Mouse
12738449Spcq2_msperm count QTL 2 (mouse)93939988573399885Mouse
1301702Brm1_mbrachyury modifier 1 (mouse)Not determined94080504774805204Mouse
13207569Tcq13_mtotal cholesterol QTL 13 (mouse)959897283109089068Mouse
10043971Obq32_mobesity QTL 32 (mouse)Not determined93781952871819528Mouse
1301965Vmbic5_mventral midbrain iron content 5 (mouse)Not determined95759149265831177Mouse
10043847Hdlq89_mHDL QTL 89 (mouse)Not determined92929292963293072Mouse
10045639Heal28_mwound healing/regeneration 28 (mouse)Not determined94348071477480860Mouse
13525008Hrtiq1_mheart rate time index, QTL 1 (mouse)95242609868556008Mouse
1300848Skull13_mskull morphology 13 (mouse)Not determined95936994693370128Mouse
4141148Cq5_mcholesterol QTL 5 (mouse)Not determined93245242166452546Mouse
4142042Alpq3_malcohol preference QTL 3 (mouse)Not determined93730619798701707Mouse
1301365Ap5q_malcohol preference 5 QTL (mouse)Not determined93005316464053277Mouse
1301241Renf1_mrenal failure 1 (mouse)Not determined95203447899792481Mouse
1301611Lrnx3_mlearning contextual 3 (mouse)Not determined96214976796149881Mouse
10043877Adip21_madiposity 21 (mouse)Not determined95643910890439255Mouse
1300716Cd4ts4_mCD4 T cell subset 4 (mouse)Not determined94883105682831177Mouse

Markers in Region
RH135938  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map9BUniSTS


Expression

RNA-SEQ Expression


Sequence


Ensembl Acc Id: ENSMUST00000034777   ⟹   ENSMUSP00000034777
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl962,765,386 - 62,783,203 (+)Ensembl
GRCm38.p6 Ensembl962,858,104 - 62,875,921 (+)Ensembl
Ensembl Acc Id: ENSMUST00000163820   ⟹   ENSMUSP00000132298
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl962,765,403 - 62,783,196 (+)Ensembl
GRCm38.p6 Ensembl962,858,121 - 62,875,914 (+)Ensembl
Ensembl Acc Id: ENSMUST00000213643   ⟹   ENSMUSP00000150355
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl962,765,362 - 62,783,197 (+)Ensembl
GRCm38.p6 Ensembl962,858,080 - 62,875,915 (+)Ensembl
Ensembl Acc Id: ENSMUST00000214633   ⟹   ENSMUSP00000150476
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl962,765,414 - 62,782,884 (+)Ensembl
GRCm38.p6 Ensembl962,858,132 - 62,875,602 (+)Ensembl
Ensembl Acc Id: ENSMUST00000215119
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl962,765,396 - 62,767,798 (+)Ensembl
GRCm38.p6 Ensembl962,858,114 - 62,860,516 (+)Ensembl
Ensembl Acc Id: ENSMUST00000215870   ⟹   ENSMUSP00000148892
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl962,765,414 - 62,779,148 (+)Ensembl
GRCm38.p6 Ensembl962,858,132 - 62,871,866 (+)Ensembl
Ensembl Acc Id: ENSMUST00000215968   ⟹   ENSMUSP00000149319
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl962,765,416 - 62,782,926 (+)Ensembl
GRCm38.p6 Ensembl962,858,134 - 62,875,644 (+)Ensembl
RefSeq Acc Id: NM_001102468   ⟹   NP_001095938
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39962,765,386 - 62,783,200 (+)NCBI
GRCm38962,858,104 - 62,875,918 (+)NCBI
MGSCv37962,705,911 - 62,723,725 (+)RGD
Celera960,083,497 - 60,094,995 (+)RGD
cM Map9 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_138304   ⟹   NP_612177
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39962,765,386 - 62,783,200 (+)NCBI
GRCm38962,858,104 - 62,875,918 (+)NCBI
MGSCv37962,705,911 - 62,723,725 (+)RGD
Celera960,083,497 - 60,094,995 (+)RGD
cM Map9 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_006511529   ⟹   XP_006511592
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39962,765,212 - 62,782,827 (+)NCBI
GRCm38962,857,745 - 62,875,921 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006511530   ⟹   XP_006511593
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39962,765,370 - 62,783,203 (+)NCBI
GRCm38962,858,088 - 62,875,921 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006511532   ⟹   XP_006511595
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39962,765,356 - 62,783,203 (+)NCBI
GRCm38962,858,078 - 62,875,921 (+)NCBI
Sequence:
RefSeq Acc Id: XM_017313679   ⟹   XP_017169168
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39962,765,068 - 62,783,200 (+)NCBI
GRCm38962,857,472 - 62,875,921 (+)NCBI
Sequence:
RefSeq Acc Id: NP_612177   ⟸   NM_138304
- Peptide Label: isoform a
- UniProtKB: Q8R1P1 (UniProtKB/Swiss-Prot),   Q8C1Q0 (UniProtKB/Swiss-Prot),   Q3UJ19 (UniProtKB/Swiss-Prot),   Q8VD39 (UniProtKB/Swiss-Prot),   Q91WQ9 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001095938   ⟸   NM_001102468
- Peptide Label: isoform b
- UniProtKB: E9Q1L1 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006511592   ⟸   XM_006511529
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_006511595   ⟸   XM_006511532
- Peptide Label: isoform X4
- UniProtKB: Q91WQ9 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_006511593   ⟸   XM_006511530
- Peptide Label: isoform X2
- UniProtKB: A0A1L1SR54 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_017169168   ⟸   XM_017313679
- Peptide Label: isoform X3
- Sequence:
Ensembl Acc Id: ENSMUSP00000132298   ⟸   ENSMUST00000163820
Ensembl Acc Id: ENSMUSP00000034777   ⟸   ENSMUST00000034777
Ensembl Acc Id: ENSMUSP00000150355   ⟸   ENSMUST00000213643
Ensembl Acc Id: ENSMUSP00000149319   ⟸   ENSMUST00000215968
Ensembl Acc Id: ENSMUSP00000148892   ⟸   ENSMUST00000215870
Ensembl Acc Id: ENSMUSP00000150476   ⟸   ENSMUST00000214633
Protein Domains
EF-hand

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q91WQ9-F1-model_v2 AlphaFold Q91WQ9 1-153 view protein structure

Promoters
RGD ID:6844273
Promoter ID:MM_KWN:57694
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Kidney,   Lung
Transcripts:ENSMUST00000034777,   NM_001102468,   UC009QAO.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36962,705,291 - 62,705,942 (+)MPROMDB
RGD ID:8669912
Promoter ID:EPDNEW_M12986
Type:initiation region
Name:Calml4_1
Description:Mus musculus calmodulin-like 4 , transcript variant 2, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38962,858,092 - 62,858,152EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:1922850 AgrOrtholog
Ensembl Genes ENSMUSG00000032246 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000034777 ENTREZGENE
  ENSMUST00000034777.14 UniProtKB/Swiss-Prot
  ENSMUST00000163820 ENTREZGENE
  ENSMUST00000163820.3 UniProtKB/TrEMBL
  ENSMUST00000213643 ENTREZGENE
  ENSMUST00000213643.2 UniProtKB/Swiss-Prot
  ENSMUST00000214633.2 UniProtKB/TrEMBL
  ENSMUST00000215870.2 UniProtKB/Swiss-Prot
  ENSMUST00000215968 ENTREZGENE
  ENSMUST00000215968.2 UniProtKB/TrEMBL
Gene3D-CATH EF-hand UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro Ca-Reg_Muscle_Contr_Cell_Proc UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  EF-hand-dom_pair UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  EF_hand_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:75600 UniProtKB/Swiss-Prot
MGD MGI:1922850 ENTREZGENE
NCBI Gene 75600 ENTREZGENE
PANTHER CALMODULIN-LIKE PROTEIN 4 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  MYOSIN LIGHT CHAIN 1, 3 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam EF-hand_7 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Calml4 PhenoGen
PROSITE EF_HAND_2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
SMART EFh UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF47473 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt A0A1L1SR54 ENTREZGENE, UniProtKB/TrEMBL
  A0A1L1STT7_MOUSE UniProtKB/TrEMBL
  CALL4_MOUSE UniProtKB/Swiss-Prot
  E9Q1L1 ENTREZGENE, UniProtKB/TrEMBL
  Q3UJ19 ENTREZGENE
  Q8C1Q0 ENTREZGENE
  Q8R1P1 ENTREZGENE
  Q8VD39 ENTREZGENE
  Q91WQ9 ENTREZGENE
UniProt Secondary Q3UJ19 UniProtKB/Swiss-Prot
  Q8C1Q0 UniProtKB/Swiss-Prot
  Q8R1P1 UniProtKB/Swiss-Prot
  Q8VD39 UniProtKB/Swiss-Prot