Nup214 (nucleoporin 214) - Rat Genome Database

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Gene: Nup214 (nucleoporin 214) Mus musculus
Analyze
Symbol: Nup214
Name: nucleoporin 214
RGD ID: 1622085
MGI Page MGI
Description: A structural constituent of nuclear pore. Acts upstream of or within mRNA export from nucleus; protein import into nucleus; and regulation of cell cycle. Predicted to be located in nuclear envelope. Predicted to be part of nuclear pore. Is expressed in future spinal cord; lung; and nervous system. Human ortholog(s) of this gene implicated in acute lymphoblastic leukemia; acute myeloid leukemia; and brain disease. Orthologous to human NUP214 (nucleoporin 214).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: 214 kDa nucleoporin; BC039282; C; CAN; D2H9S46; D2H9S46E; MGC37347; nuclear pore complex protein Nup214; nucleoporin Nup214; RP23-55I14.4
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39231,864,446 - 31,943,204 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl231,864,448 - 31,943,987 (+)EnsemblGRCm39 Ensembl
GRCm38231,974,408 - 32,053,975 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl231,974,436 - 32,053,975 (+)EnsemblGRCm38mm10GRCm38
MGSCv37231,829,970 - 31,909,495 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36231,796,448 - 31,875,984 (+)NCBIMGSCv36mm8
Celera231,677,520 - 31,757,311 (+)NCBICelera
Cytogenetic Map2BNCBI
cM Map221.97NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

Molecular Pathway Annotations     Click to see Annotation Detail View
Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
References

References - curated
# Reference Title Reference Citation
1. Regulation of mRNA trafficking by nuclear pore complexes. Bonnet A and Palancade B, Genes (Basel). 2014 Sep 2;5(3):767-91. doi: 10.3390/genes5030767.
2. Postage for the messenger: designating routes for nuclear mRNA export. Natalizio BJ and Wente SR, Trends Cell Biol. 2013 Aug;23(8):365-73. doi: 10.1016/j.tcb.2013.03.006. Epub 2013 Apr 11.
3. OMIM Disease Annotation Pipeline OMIM Disease Annotation Pipeline
4. PID Annotation Import Pipeline Pipeline to import Pathway Interaction Database annotations from NCI into RGD
5. Mouse MP Annotation Import Pipeline RGD automated import pipeline
6. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
7. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
8. Nuclear export and cytoplasmic maturation of ribosomal subunits. Zemp I and Kutay U, FEBS Lett. 2007 Jun 19;581(15):2783-93. Epub 2007 May 11.
Additional References at PubMed
PMID:7774911   PMID:8211130   PMID:8896451   PMID:10349636   PMID:11042159   PMID:11076861   PMID:11217851   PMID:12466851   PMID:12477932   PMID:12520002   PMID:12693553   PMID:12791264  
PMID:12904583   PMID:14610273   PMID:14697343   PMID:16141072   PMID:16141073   PMID:17967808   PMID:18539113   PMID:19026994   PMID:19581287   PMID:20360068   PMID:21267068   PMID:21677750  
PMID:21873635   PMID:22922362   PMID:23086144   PMID:24457600   PMID:26496610   PMID:27114368   PMID:29459677   PMID:31138677   PMID:32325033   PMID:32554809  


Genomics

Comparative Map Data
Nup214
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39231,864,446 - 31,943,204 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl231,864,448 - 31,943,987 (+)EnsemblGRCm39 Ensembl
GRCm38231,974,408 - 32,053,975 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl231,974,436 - 32,053,975 (+)EnsemblGRCm38mm10GRCm38
MGSCv37231,829,970 - 31,909,495 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36231,796,448 - 31,875,984 (+)NCBIMGSCv36mm8
Celera231,677,520 - 31,757,311 (+)NCBICelera
Cytogenetic Map2BNCBI
cM Map221.97NCBI
NUP214
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh389131,125,586 - 131,234,663 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl9131,125,573 - 131,234,663 (+)EnsemblGRCh38hg38GRCh38
GRCh379134,000,973 - 134,110,050 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 369132,990,802 - 133,098,912 (+)NCBINCBI36Build 36hg18NCBI36
Build 349131,030,534 - 131,138,644NCBI
Celera9104,540,049 - 104,648,175 (+)NCBICelera
Cytogenetic Map9q34.13NCBI
HuRef9103,491,679 - 103,601,026 (+)NCBIHuRef
CHM1_19134,150,562 - 134,259,670 (+)NCBICHM1_1
T2T-CHM13v2.09143,333,818 - 143,442,978 (+)NCBIT2T-CHM13v2.0
Nup214
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8335,652,841 - 35,738,323 (+)NCBIGRCr8
mRatBN7.2315,255,111 - 15,340,568 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl315,255,119 - 15,340,568 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx318,328,071 - 18,410,174 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0326,913,061 - 26,995,162 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0325,160,272 - 25,245,882 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.039,227,869 - 9,236,878 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0310,993,584 - 11,070,638 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl39,227,823 - 9,236,736 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_6.0 Ensembl310,999,186 - 11,070,640 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0316,351,780 - 16,423,232 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Rnor_5.0314,588,337 - 14,597,175 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4311,079,165 - 11,165,173 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1310,975,349 - 11,062,057 (+)NCBI
Celera310,002,669 - 10,087,697 (+)NCBICelera
Cytogenetic Map3p12NCBI
Nup214
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0NW_004955513955,639 - 1,038,912 (+)NCBIChiLan1.0ChiLan1.0
NUP214
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2118,117,336 - 8,227,218 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan198,119,678 - 8,229,571 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v09102,246,575 - 102,355,291 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.19130,893,110 - 131,001,305 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl9130,893,110 - 131,001,305 (+)Ensemblpanpan1.1panPan2
NUP214
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1952,840,300 - 52,943,785 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl952,841,096 - 52,947,770 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha952,105,504 - 52,144,484 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0953,741,391 - 53,844,849 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl953,741,391 - 53,844,989 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1952,518,914 - 52,622,350 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0952,839,417 - 52,942,849 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0952,932,424 - 53,035,905 (-)NCBIUU_Cfam_GSD_1.0
Nup214
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024404947198,212,850 - 198,299,295 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493648717,981,304 - 18,067,854 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_00493648717,981,402 - 18,067,828 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
NUP214
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1271,104,033 - 271,210,288 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11271,103,838 - 271,210,292 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21305,130,794 - 305,237,538 (+)NCBISscrofa10.2Sscrofa10.2susScr3
NUP214
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1126,905,047 - 7,014,907 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl126,903,096 - 7,014,887 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_0236660798,486,610 - 8,597,948 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Nup214
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247604,655,247 - 4,739,298 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247604,655,347 - 4,738,811 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Nup214
3594 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:1787
Count of miRNA genes:722
Interacting mature miRNAs:901
Transcripts:ENSMUST00000065398, ENSMUST00000123062, ENSMUST00000124455, ENSMUST00000126301, ENSMUST00000129496, ENSMUST00000130185, ENSMUST00000130975, ENSMUST00000138012, ENSMUST00000146138, ENSMUST00000152791, ENSMUST00000153096
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
8552706Cia24_mcollagen induced arthritis QTL 24 (mouse)Not determined22467911533523172Mouse
8552707Cia23_mcollagen induced arthritis QTL 23 (mouse)Not determined21212953766556453Mouse
12904005Cfq2_mconditioned fear QTL 2 (mouse)22702264256396228Mouse
14746979Manh51_mmandible shape 51 (mouse)22896112962961129Mouse
1300624Insq7_minsulin QTL 7 (mouse)Not determined2938444643384575Mouse
8552705Cia25_mcollagen induced arthritis 25 (mouse)Not determined22467911533523172Mouse
39128209Lwq14_mliver weight QTL 14 (mouse)220897778118894840Mouse
1558738W6q1_mweight 6 weeks QTL 1 (mouse)Not determined220897778118894840Mouse
4141236Hbnr5_mHeligmosomoides bakeri nematode resistance 5 (mouse)Not determined31214567105143570Mouse
26884438Sklq12_mskull length QTL 12, 16 week (mouse)22459001254890012Mouse
12904008Cfq6_mconditioned fear QTL 6 (mouse)23120303544508204Mouse
1301790Pcfm1_mperiosteal circumference and femur length 1 (mouse)Not determined2823629642236396Mouse
1302174Dssc2_mdextran sodium sulfate induced colitis QTL2 (mouse)Not determined224224632148700377Mouse
4142130Pgis2_mproteoglycan induced spondylitis 2 (mouse)Not determined22530805156971811Mouse
1301980Fcsa5_mfemoral cross-sectional area 5 (mouse)Not determined2767911541679261Mouse
1301376Etohc1_methanol consumption 1 (mouse)Not determined22112972555129871Mouse
1558915W3q1_mweight 3 weeks QTL 1 (mouse)Not determined220897778118894840Mouse
14746997Mancz2_mmandible centroid size 2 (mouse)22896112962961129Mouse
12792980Fbmd1_mfemoral bone mineral density 1, females only (mouse)22503449245034492Mouse
1301769Orgwq2_morgan weight QTL 2 (mouse)Not determined2388712693421651Mouse
1301641Sbmd2_mspinal bone mineral density 2 (mouse)Not determined21421456748214713Mouse
1357454Kidq1_mkidney weight QTL 1 (mouse)Not determined220897778118894840Mouse
10755513Amzn4_manatomical modifier of Zfp423 4 (mouse)2938444643384575Mouse
1558966W10q9_mweight 10 weeks QTL 9 (mouse)Not determined220897778118894840Mouse
4141854T2dm2sa_mtype 2 diabetes mellitus 2 in SMXA RI mice (mouse)Not determined229307947148374934Mouse
13463470Tubisq1_mtubulointerstitial injury severity, QTL 1 (mouse)22368914557689269Mouse
1558899Egq1_mearly growth QTL 1 (mouse)Not determined220897778118894840Mouse
1357681Hrtq1_mheart weight QTL 1 (mouse)Not determined220897778118894840Mouse
1357436Splq1_mspleen weight QTL 1 (mouse)Not determined220897778118894840Mouse
1357881Estoq1_membryo survival total QTL 1 (mouse)Not determined220897778118894840Mouse
1300577Capsq1_mcapsaicin sensitivity related QTL 1 (mouse)Not determined22760206084013384Mouse
4141708Pbwg1.2_mpostnatal body weight growth 1.2 (mouse)Not determined2112972555129871Mouse
10043876Adip22_madiposity 22 (mouse)Not determined2830805142308240Mouse

Markers in Region
AI043124  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38231,973,303 - 31,973,410UniSTSGRCm38
MGSCv37231,828,823 - 31,828,930UniSTSGRCm37
Celera231,676,373 - 31,676,480UniSTS
Cytogenetic Map2BUniSTS
cM Map221.3UniSTS
Whitehead/MRC_RH2538.2UniSTS
Tjp1  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map2BUniSTS
Cytogenetic Map7CUniSTS
cM Map728.5UniSTS


Expression

RNA-SEQ Expression


Sequence


Ensembl Acc Id: ENSMUST00000065398   ⟹   ENSMUSP00000066492
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl231,864,448 - 31,942,383 (+)Ensembl
GRCm38.p6 Ensembl231,974,436 - 32,052,371 (+)Ensembl
Ensembl Acc Id: ENSMUST00000123062
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl231,915,307 - 31,921,734 (+)Ensembl
GRCm38.p6 Ensembl232,025,295 - 32,031,722 (+)Ensembl
Ensembl Acc Id: ENSMUST00000124455
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl231,941,704 - 31,942,377 (+)Ensembl
GRCm38.p6 Ensembl232,051,692 - 32,052,365 (+)Ensembl
Ensembl Acc Id: ENSMUST00000126301   ⟹   ENSMUSP00000141436
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl231,887,973 - 31,894,442 (+)Ensembl
GRCm38.p6 Ensembl231,997,961 - 32,004,430 (+)Ensembl
Ensembl Acc Id: ENSMUST00000129496
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl231,869,784 - 31,881,373 (+)Ensembl
GRCm38.p6 Ensembl231,979,772 - 31,991,361 (+)Ensembl
Ensembl Acc Id: ENSMUST00000130185
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl231,900,281 - 31,901,654 (+)Ensembl
GRCm38.p6 Ensembl232,010,269 - 32,011,642 (+)Ensembl
Ensembl Acc Id: ENSMUST00000130975
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl231,864,498 - 31,869,968 (+)Ensembl
GRCm38.p6 Ensembl231,974,486 - 31,979,956 (+)Ensembl
Ensembl Acc Id: ENSMUST00000138012   ⟹   ENSMUSP00000115665
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl231,923,988 - 31,943,987 (+)Ensembl
GRCm38.p6 Ensembl232,033,976 - 32,053,975 (+)Ensembl
Ensembl Acc Id: ENSMUST00000146138
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl231,941,007 - 31,942,866 (+)Ensembl
GRCm38.p6 Ensembl232,050,995 - 32,052,854 (+)Ensembl
Ensembl Acc Id: ENSMUST00000152791   ⟹   ENSMUSP00000142255
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl231,932,530 - 31,942,379 (+)Ensembl
GRCm38.p6 Ensembl232,042,518 - 32,052,367 (+)Ensembl
Ensembl Acc Id: ENSMUST00000153096
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl231,884,833 - 31,888,709 (+)Ensembl
GRCm38.p6 Ensembl231,994,821 - 31,998,697 (+)Ensembl
RefSeq Acc Id: NM_001408097   ⟹   NP_001395026
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39231,864,446 - 31,943,204 (+)NCBI
RefSeq Acc Id: NM_172268   ⟹   NP_758472
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39231,864,446 - 31,943,204 (+)NCBI
GRCm38231,974,450 - 32,053,975 (+)NCBI
MGSCv37231,829,970 - 31,909,495 (+)RGD
Celera231,677,520 - 31,757,311 (+)RGD
cM Map2 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_017317376   ⟹   XP_017172865
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39231,907,919 - 31,942,383 (+)NCBI
GRCm38232,017,907 - 32,052,371 (+)NCBI
Sequence:
RefSeq Acc Id: XM_036160853   ⟹   XP_036016746
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39231,869,882 - 31,942,383 (+)NCBI
Sequence:
RefSeq Acc Id: NP_758472   ⟸   NM_172268
- Peptide Label: isoform 1
- UniProtKB: Q80U93 (UniProtKB/Swiss-Prot),   A2ATN2 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_017172865   ⟸   XM_017317376
- Peptide Label: isoform X3
- Sequence:
Ensembl Acc Id: ENSMUSP00000066492   ⟸   ENSMUST00000065398
Ensembl Acc Id: ENSMUSP00000115665   ⟸   ENSMUST00000138012
Ensembl Acc Id: ENSMUSP00000142255   ⟸   ENSMUST00000152791
Ensembl Acc Id: ENSMUSP00000141436   ⟸   ENSMUST00000126301
RefSeq Acc Id: XP_036016746   ⟸   XM_036160853
- Peptide Label: isoform X2
- UniProtKB: Q8CHS9 (UniProtKB/TrEMBL)
RefSeq Acc Id: NP_001395026   ⟸   NM_001408097
- Peptide Label: isoform 2
Protein Domains
Anaphase-promoting complex subunit 4-like WD40   Nuclear pore complex protein Nup214 phenylalanine-

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q80U93-F1-model_v2 AlphaFold Q80U93 1-2085 view protein structure

Promoters
RGD ID:6831961
Promoter ID:MM_KWN:28645
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day0,   3T3L1_Day1,   3T3L1_Day2,   3T3L1_Day3,   3T3L1_Day4,   BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   ES_Cell,   Kidney,   Liver,   Lung,   MEF_B4,   MEF_B6,   Spleen
Transcripts:OTTMUST00000031160,   OTTMUST00000031161
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36231,829,601 - 31,830,101 (+)MPROMDB
RGD ID:6831964
Promoter ID:MM_KWN:28650
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:BoneMarrow_0Hour,   Spleen
Transcripts:OTTMUST00000031165
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36231,865,684 - 31,866,184 (+)MPROMDB
RGD ID:6831967
Promoter ID:MM_KWN:28653
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:BoneMarrow_0Hour,   Brain,   Kidney,   Lung
Transcripts:UC008JEI.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36231,888,341 - 31,890,097 (+)MPROMDB
RGD ID:6831962
Promoter ID:MM_KWN:28655
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Kidney,   Lung,   Spleen
Transcripts:OTTMUST00000031169
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36231,905,709 - 31,906,209 (+)MPROMDB
RGD ID:6831965
Promoter ID:MM_KWN:28656
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:BoneMarrow_0Hour
Transcripts:OTTMUST00000031170
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36231,906,171 - 31,906,671 (+)MPROMDB
RGD ID:6876964
Promoter ID:EPDNEW_M1933
Type:initiation region
Name:Nup214_1
Description:Mus musculus nucleoporin 214 , mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38231,974,464 - 31,974,524EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:1095411 AgrOrtholog
Ensembl Genes ENSMUSG00000001855 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000065398 ENTREZGENE
  ENSMUST00000065398.13 UniProtKB/Swiss-Prot
  ENSMUST00000126301.3 UniProtKB/TrEMBL
  ENSMUST00000138012.2 UniProtKB/TrEMBL
  ENSMUST00000152791.4 UniProtKB/TrEMBL
Gene3D-CATH 2.130.10.10 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro Apc4_WD40_dom UniProtKB/TrEMBL
  Nucleoporin UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Nup214_FG UniProtKB/TrEMBL
  WD40/YVTN_repeat-like_dom_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  WD40_repeat UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:227720 UniProtKB/Swiss-Prot
MGD MGI:1095411 ENTREZGENE
NCBI Gene Nup214 ENTREZGENE
PANTHER NUCLEAR PORE COMPLEX PROTEIN NUP214 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PTHR23193 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam ANAPC4_WD40 UniProtKB/TrEMBL
  Nup214_FG UniProtKB/TrEMBL
PhenoGen Nup214 PhenoGen
SMART WD40 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP Nucleoporin domain UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt A0A0A6YW83_MOUSE UniProtKB/TrEMBL
  A0A0A6YY32_MOUSE UniProtKB/TrEMBL
  A2ATN2 ENTREZGENE
  A2ATN3_MOUSE UniProtKB/TrEMBL
  NU214_MOUSE UniProtKB/Swiss-Prot
  Q3TLG4_MOUSE UniProtKB/TrEMBL
  Q3UBL1_MOUSE UniProtKB/TrEMBL
  Q80U93 ENTREZGENE
  Q8CHS9 ENTREZGENE, UniProtKB/TrEMBL
UniProt Secondary A2ATN2 UniProtKB/Swiss-Prot