Ms4a15 (membrane-spanning 4-domains, subfamily A, member 15) - Rat Genome Database

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Gene: Ms4a15 (membrane-spanning 4-domains, subfamily A, member 15) Mus musculus
Analyze
Symbol: Ms4a15
Name: membrane-spanning 4-domains, subfamily A, member 15
RGD ID: 1619583
MGI Page MGI
Description: Predicted to be involved in cell surface receptor signaling pathway. Predicted to be located in membrane. Predicted to be active in plasma membrane. Orthologous to human MS4A15 (membrane spanning 4-domains A15).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: E530011F12Rik; Gm1286; membrane-spanning 4-domains subfamily A member 15; predicted gene 1286
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391910,955,667 - 10,970,614 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1910,955,671 - 10,970,614 (-)EnsemblGRCm39 Ensembl
GRCm381910,978,303 - 10,993,299 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1910,978,307 - 10,993,250 (-)EnsemblGRCm38mm10GRCm38
MGSCv371911,052,797 - 11,067,740 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361911,045,352 - 11,060,295 (-)NCBIMGSCv36mm8
Celera1911,669,311 - 11,684,741 (-)NCBICelera
Cytogenetic Map19ANCBI
cM Map197.47NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:10349636   PMID:11042159   PMID:11076861   PMID:11217851   PMID:12466851   PMID:12477932   PMID:16141072   PMID:16141073   PMID:21873635  


Genomics

Comparative Map Data
Ms4a15
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391910,955,667 - 10,970,614 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1910,955,671 - 10,970,614 (-)EnsemblGRCm39 Ensembl
GRCm381910,978,303 - 10,993,299 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1910,978,307 - 10,993,250 (-)EnsemblGRCm38mm10GRCm38
MGSCv371911,052,797 - 11,067,740 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361911,045,352 - 11,060,295 (-)NCBIMGSCv36mm8
Celera1911,669,311 - 11,684,741 (-)NCBICelera
Cytogenetic Map19ANCBI
cM Map197.47NCBI
MS4A15
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381160,756,867 - 60,776,733 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1160,756,867 - 60,776,733 (+)EnsemblGRCh38hg38GRCh38
GRCh371160,524,340 - 60,544,206 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361160,280,916 - 60,300,780 (+)NCBINCBI36Build 36hg18NCBI36
Celera1157,888,546 - 57,908,417 (+)NCBICelera
Cytogenetic Map11q12.2NCBI
HuRef1156,871,327 - 56,891,196 (+)NCBIHuRef
CHM1_11160,390,691 - 60,410,552 (+)NCBICHM1_1
T2T-CHM13v2.01160,708,024 - 60,727,897 (+)NCBIT2T-CHM13v2.0
Ms4a15
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81217,053,199 - 217,066,693 (-)NCBIGRCr8
mRatBN7.21207,628,305 - 207,641,799 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1207,628,305 - 207,641,799 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1216,003,144 - 216,016,636 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01223,071,406 - 223,084,833 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01215,757,543 - 215,771,035 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01227,033,796 - 227,048,718 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1227,033,796 - 227,047,290 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01234,099,484 - 234,113,131 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41213,477,584 - 213,491,078 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera1205,120,308 - 205,133,803 (-)NCBICelera
Cytogenetic Map1q43NCBI
Ms4a15
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049555115,485,001 - 5,502,748 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049555115,485,001 - 5,502,548 (+)NCBIChiLan1.0ChiLan1.0
MS4A15
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2961,928,415 - 61,948,376 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11162,972,458 - 62,992,363 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01156,022,378 - 56,042,262 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11159,463,341 - 59,483,412 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1159,463,321 - 59,483,412 (+)Ensemblpanpan1.1panPan2
MS4A15
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11855,488,523 - 55,496,359 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1854,061,183 - 54,069,335 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01856,535,997 - 56,544,122 (-)NCBIROS_Cfam_1.0
UMICH_Zoey_3.11855,593,565 - 55,601,675 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01855,214,971 - 55,223,094 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01856,096,208 - 56,104,332 (-)NCBIUU_Cfam_GSD_1.0
Ms4a15
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494712,002,989 - 12,009,770 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365812,117,387 - 2,130,743 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365812,116,823 - 2,123,592 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
MS4A15
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl210,960,498 - 10,969,359 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1210,959,559 - 10,969,433 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2210,434,022 - 10,449,148 (-)NCBISscrofa10.2Sscrofa10.2susScr3
MS4A15
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1113,061,545 - 13,073,392 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl113,061,584 - 13,073,280 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_023666038110,422,419 - 110,434,426 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Ms4a15
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_004624926228,943 - 235,346 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_004624926225,576 - 236,243 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Ms4a15
585 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:746
Count of miRNA genes:438
Interacting mature miRNAs:522
Transcripts:ENSMUST00000087923, ENSMUST00000144485, ENSMUST00000145110
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
4142302Nstr1_mnerve sheath tumor resistance QTL 1 (mouse)Not determined19122371338Mouse
1301271Datd_mdopamine transporter density (mouse)Not determined19132340234Mouse
1300923Bits4_mbitterness sensitivity 4 (mouse)Not determined19332321637323348Mouse
11039522Tbbr4_mTrypanosoma brucei brucei response 4 (mouse)19531332639313470Mouse
4142161Drinksac2_mdrink saccharin 2 (mouse)Not determined120695286Mouse
1357819Tgct2_mtesticular germ cell tumor 2 (mouse)Not determined19332855120539663Mouse
1302019Pgia23_mproteoglycan induced arthritis 23 (mouse)Not determined19978745343787602Mouse
38455997Cdtm2_mCD62L+ CD8 TM cells 2 (mouse)19997736419977364Mouse
4142406Pbctlp1_mperipheral blood cytotoxic T lymphocyte percentage 1 (mouse)Not determined132875174Mouse
1300776Lfp3_mlong free running period 3 (mouse)Not determined19120328703Mouse
1300904Chab5_mcholesterol absorption 5 (mouse)Not determined19165376435653927Mouse
26884385Skwq14_mskull length QTL 14, 16 week (mouse)19325000035877400Mouse
1301800Faq10_mfluctuating asymmetry QTL 10 (mouse)Not determined19332321637323348Mouse
1300591Pas3_mpulmonary adenoma susceptibility 3 (mouse)Not determined19332321637323348Mouse
1302126Skull26_mskull morphology 26 (mouse)Not determined19332321637323348Mouse
1301228Iba4_minduction of brown adipocytes 4 (mouse)Not determined19930571543305821Mouse

Markers in Region
BB560129  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map19AUniSTS
Whitehead/MRC_RH19123.42UniSTS
D10Mit157.2  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map6D1UniSTS
Cytogenetic Map16B4UniSTS
Cytogenetic Map18E2UniSTS
Cytogenetic Map4C3UniSTS
Cytogenetic Map7B2UniSTS
Cytogenetic Map4D2.3UniSTS
Cytogenetic Map11E1UniSTS
Cytogenetic Map14E2.2UniSTS
Cytogenetic Map4C7UniSTS
Cytogenetic Map2H4UniSTS
Cytogenetic Map1FUniSTS
Cytogenetic Map6C3UniSTS
Cytogenetic Map11DUniSTS
Cytogenetic Map3G2UniSTS
Cytogenetic Map17A1UniSTS
Cytogenetic Map9F2UniSTS
Cytogenetic Map12F1UniSTS
Cytogenetic Map19C2UniSTS
Cytogenetic Map3BUniSTS
Cytogenetic Map8C1UniSTS
Cytogenetic Map18A2UniSTS
Cytogenetic Map3F2UniSTS
Cytogenetic Map14C3UniSTS
Cytogenetic Map8E1UniSTS
Cytogenetic Map8E2UniSTS
Cytogenetic Map5B1UniSTS
Cytogenetic Map18B1UniSTS
Cytogenetic Map9CUniSTS
Cytogenetic Map14C2UniSTS
Cytogenetic Map6A1UniSTS
Cytogenetic Map10B4UniSTS
Cytogenetic Map13D2.1UniSTS
Cytogenetic Map5E5UniSTS
Cytogenetic Map11B1.3UniSTS
Cytogenetic Map4D1UniSTS
Cytogenetic Map9A5.2UniSTS
Cytogenetic Map3F1UniSTS
Cytogenetic Map17E3UniSTS
Cytogenetic Map11B3UniSTS
Cytogenetic Map1H4UniSTS
Cytogenetic Map6A3UniSTS
Cytogenetic Map5E4-E5UniSTS
Cytogenetic Map15E1UniSTS
Cytogenetic Map13DUniSTS
Cytogenetic Map14BUniSTS
Cytogenetic Map14D1UniSTS
Cytogenetic Map7B4UniSTS
Cytogenetic Map8D3UniSTS
Cytogenetic MapXDUniSTS
Cytogenetic Map17A3.3UniSTS
Cytogenetic Map7E2UniSTS
Cytogenetic Map1H2.3UniSTS
Cytogenetic Map7A2UniSTS
Cytogenetic Map7F3UniSTS
Cytogenetic Map9F1UniSTS
Cytogenetic Map10C1UniSTS
Cytogenetic Map4E2UniSTS
Cytogenetic Map16A1UniSTS
Cytogenetic Map8B3.3UniSTS
Cytogenetic Map8D2UniSTS
Cytogenetic Map3DUniSTS
Cytogenetic Map15D2UniSTS
Cytogenetic Map17B1UniSTS
Cytogenetic Map7A3UniSTS
Cytogenetic Map15F1UniSTS
Cytogenetic Map16B2UniSTS
Cytogenetic Map7CUniSTS
Cytogenetic Map3F2.1UniSTS
Cytogenetic Map6F3UniSTS
Cytogenetic Map1C4UniSTS
Cytogenetic Map11E2UniSTS
Cytogenetic Map11B5UniSTS
Cytogenetic Map9F3UniSTS
Cytogenetic Map2BUniSTS
Cytogenetic Map13B3UniSTS
Cytogenetic Map9A4UniSTS
Cytogenetic Map5A3UniSTS
Cytogenetic Map2H1UniSTS
Cytogenetic Map16B1UniSTS
Cytogenetic Map1A5UniSTS
Cytogenetic Map11CUniSTS
Cytogenetic Map9E1UniSTS
Cytogenetic Map6G1UniSTS
Cytogenetic MapXA2UniSTS
Cytogenetic Map13B1UniSTS
Cytogenetic Map5E2UniSTS
Cytogenetic Map12C1UniSTS
Cytogenetic Map5FUniSTS
Cytogenetic Map4D3UniSTS
Cytogenetic Map10C2UniSTS
Cytogenetic Map9BUniSTS
Cytogenetic Map5G2UniSTS
Cytogenetic Map7F1UniSTS
Cytogenetic Map12C3UniSTS
Cytogenetic Map10A4UniSTS
Cytogenetic Map8A2UniSTS
Cytogenetic Map18A1UniSTS
Cytogenetic Map12A1.1UniSTS
Cytogenetic Map1C2UniSTS
Cytogenetic Map11B2UniSTS
Cytogenetic Map6E3UniSTS
Cytogenetic Map5C3.3UniSTS
Cytogenetic Map1BUniSTS
Cytogenetic Map17A3.1UniSTS
Cytogenetic Map7A1UniSTS
Cytogenetic Map2E5UniSTS
Cytogenetic Map11A1UniSTS
Cytogenetic Map4B1UniSTS
Cytogenetic Map15A2UniSTS
Cytogenetic Map8C3UniSTS
Cytogenetic Map2A3UniSTS
Cytogenetic Map5G3UniSTS
Cytogenetic Map4A3UniSTS
Cytogenetic Map2H3UniSTS
Cytogenetic Map8A1UniSTS
Cytogenetic Map8A1.1UniSTS
Cytogenetic Map16A3UniSTS
Cytogenetic Map10B1UniSTS
Cytogenetic Map19AUniSTS
Cytogenetic Map10A1UniSTS
Cytogenetic Map13D1UniSTS
Cytogenetic Map4A1UniSTS
Cytogenetic Map9A3UniSTS
Cytogenetic Map17CUniSTS
Cytogenetic Map1DUniSTS
Cytogenetic Map5E3UniSTS
Cytogenetic Map15D3UniSTS
Cytogenetic Map2H2UniSTS
Cytogenetic Map7D3UniSTS
Cytogenetic Map2A1UniSTS
Cytogenetic Map14C1UniSTS
Cytogenetic Map14E5UniSTS
Cytogenetic Map10CUniSTS
Cytogenetic Map18B2UniSTS
Cytogenetic Map2F1UniSTS
Cytogenetic Map10D3UniSTS
Cytogenetic Map17A2UniSTS
Cytogenetic Map2C3UniSTS
Cytogenetic Map1C3UniSTS
Cytogenetic Map17B2UniSTS
Cytogenetic Map5B2UniSTS
Cytogenetic Map5G1UniSTS
Cytogenetic Map4C6UniSTS
Cytogenetic Map13C3UniSTS
Cytogenetic Map2E1UniSTS
Cytogenetic Map17A3.2-A3.3UniSTS
Cytogenetic Map19C3UniSTS
Cytogenetic Map7E3UniSTS
Cytogenetic Map13C1UniSTS
Cytogenetic Map9E3.1UniSTS
Cytogenetic Map15E3UniSTS
Cytogenetic Map6B1UniSTS
Cytogenetic MapXE3UniSTS
Cytogenetic Map4C4UniSTS
Cytogenetic Map3E3UniSTS
Cytogenetic Map11A4UniSTS
Cytogenetic Map4C5UniSTS
Cytogenetic Map18B3UniSTS
Cytogenetic Map9A2UniSTS
Cytogenetic Map7E1UniSTS
Cytogenetic Map5D-E1UniSTS
Cytogenetic Map5B3UniSTS
Cytogenetic Map13A2-A3UniSTS
Cytogenetic Map5A2UniSTS
Cytogenetic Map4B3UniSTS
Cytogenetic Map1E4UniSTS
Cytogenetic Map17E4UniSTS
Cytogenetic Map1G2UniSTS
Cytogenetic Map15B3.1UniSTS
Cytogenetic Map12EUniSTS
Cytogenetic MapXA5UniSTS
Cytogenetic Map6A3.3UniSTS
Cytogenetic Map6G3UniSTS
Cytogenetic Map6F2UniSTS
Cytogenetic Map5C1UniSTS
Cytogenetic Map4D2.1UniSTS
Cytogenetic Map4A5UniSTS
Cytogenetic Map3F2.2UniSTS
Cytogenetic Map1E3-E4UniSTS
Cytogenetic Map9F1-F3UniSTS
Cytogenetic Map1C1.1UniSTS
Cytogenetic Map14D2UniSTS
Cytogenetic Map12A2UniSTS
Cytogenetic Map17A3-BUniSTS
Cytogenetic Map7F5UniSTS
Cytogenetic Map14A3UniSTS
Cytogenetic Map5G1.1UniSTS
Cytogenetic MapXF2-F4UniSTS
Cytogenetic Map7D2UniSTS
Cytogenetic Map2F3UniSTS
Cytogenetic Map10A3UniSTS
Cytogenetic MapXA7.3UniSTS
Cytogenetic Map9F1-F2UniSTS
Cytogenetic Map13A3.2UniSTS
Cytogenetic Map10A2UniSTS
Cytogenetic Map1C1UniSTS
Cytogenetic Map1A1UniSTS
Cytogenetic Map12D3UniSTS
Cytogenetic Map1A3-A5UniSTS
Cytogenetic Map2A2UniSTS
Cytogenetic Map3A1UniSTS
Cytogenetic MapXA3.3UniSTS
Cytogenetic Map16A-B1UniSTS
Cytogenetic Map1D2.3UniSTS
Cytogenetic Map6B2.3UniSTS
Cytogenetic Map2G3UniSTS
Cytogenetic MapXA2-A3.1UniSTS
Cytogenetic Map9A5.3UniSTS
Cytogenetic Map14A2-BUniSTS
Cytogenetic Map8E1-E2UniSTS
Cytogenetic Map8A3UniSTS
Cytogenetic Map1G3-H1UniSTS
Cytogenetic Map8B3-C1UniSTS
Cytogenetic Map19C1UniSTS
Cytogenetic Map8C5UniSTS
Cytogenetic Map8A4UniSTS
Cytogenetic Map15F3UniSTS
Cytogenetic Map14E4UniSTS
Cytogenetic Map4D2.2UniSTS
Cytogenetic MapXF5UniSTS
cM Map1040.0UniSTS
Whitehead Genetic1033.9UniSTS


Expression


Sequence


Ensembl Acc Id: ENSMUST00000087923   ⟹   ENSMUSP00000085234
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1910,955,671 - 10,970,614 (-)Ensembl
GRCm38.p6 Ensembl1910,978,307 - 10,993,250 (-)Ensembl
Ensembl Acc Id: ENSMUST00000144485   ⟹   ENSMUSP00000115600
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1910,960,623 - 10,970,594 (-)Ensembl
GRCm38.p6 Ensembl1910,983,259 - 10,993,230 (-)Ensembl
Ensembl Acc Id: ENSMUST00000145110   ⟹   ENSMUSP00000117513
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1910,960,537 - 10,970,545 (-)Ensembl
GRCm38.p6 Ensembl1910,983,173 - 10,993,181 (-)Ensembl
RefSeq Acc Id: NM_001034898   ⟹   NP_001030070
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391910,955,671 - 10,970,614 (-)NCBI
GRCm381910,978,307 - 10,993,250 (-)NCBI
MGSCv371911,052,797 - 11,067,740 (-)RGD
Celera1911,669,311 - 11,684,741 (-)RGD
cM Map19 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_001404618   ⟹   NP_001391547
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391910,955,667 - 10,970,546 (-)NCBI
RefSeq Acc Id: NM_001404619   ⟹   NP_001391548
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391910,955,667 - 10,970,546 (-)NCBI
RefSeq Acc Id: NP_001030070   ⟸   NM_001034898
- Peptide Label: isoform 1
- UniProtKB: B2RVI3 (UniProtKB/Swiss-Prot),   Q3UPL6 (UniProtKB/Swiss-Prot)
- Sequence:
Ensembl Acc Id: ENSMUSP00000117513   ⟸   ENSMUST00000145110
Ensembl Acc Id: ENSMUSP00000115600   ⟸   ENSMUST00000144485
Ensembl Acc Id: ENSMUSP00000085234   ⟸   ENSMUST00000087923
RefSeq Acc Id: NP_001391547   ⟸   NM_001404618
- Peptide Label: isoform 2
RefSeq Acc Id: NP_001391548   ⟸   NM_001404619
- Peptide Label: isoform 2

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q3UPL6-F1-model_v2 AlphaFold Q3UPL6 1-245 view protein structure


Additional Information

Database Acc Id Source(s)
AGR Gene MGI:3617853 AgrOrtholog
Ensembl Genes ENSMUSG00000067571 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000087923 ENTREZGENE
  ENSMUST00000087923.4 UniProtKB/Swiss-Prot
  ENSMUST00000144485.2 UniProtKB/TrEMBL
  ENSMUST00000145110.3 UniProtKB/TrEMBL
InterPro CD20-like UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  MS4A UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:545279 UniProtKB/Swiss-Prot
MGD MGI:3617853 ENTREZGENE
NCBI Gene 545279 ENTREZGENE
PANTHER MEMBRANE-SPANNING 4-DOMAINS SUBFAMILY A MEMBER 15 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PTHR23320 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam CD20 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Ms4a15 PhenoGen
UniProt B2RVI3 ENTREZGENE
  B7ZWE7_MOUSE UniProtKB/TrEMBL
  D3YZF5_MOUSE UniProtKB/TrEMBL
  D3Z471_MOUSE UniProtKB/TrEMBL
  M4A15_MOUSE UniProtKB/Swiss-Prot, ENTREZGENE
UniProt Secondary B2RVI3 UniProtKB/Swiss-Prot


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2016-04-05 Ms4a15  membrane-spanning 4-domains, subfamily A, member 15  Gm1286  predicted gene 1286  Data merged from RGD:1607112 737654 PROVISIONAL