Vmn2r26 (vomeronasal 2, receptor 26) - Rat Genome Database

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Gene: Vmn2r26 (vomeronasal 2, receptor 26) Mus musculus
Analyze
No known orthologs.
Symbol: Vmn2r26
Name: vomeronasal 2, receptor 26
RGD ID: 1619209
MGI Page MGI
Description: Enables G protein-coupled olfactory receptor activity. Acts upstream of or within neuron differentiation. Predicted to be active in plasma membrane.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: putative pheromone receptor V2R1b; tissue-type vomeronasal neurons putative pheromone receptor V2R1; V2r; V2R1; V2r1b; vomeronasal 2, receptor, 1b; vomeronasal receptor Vmn2r26; vomeronasal type-2 receptor 1b; vomeronasal type-2 receptor 26
RGD Orthologs
Alliance Orthologs
More Info homologs ...
Related Pseudogenes: Gm18374   Gm18375   Gm44823   Vmn2r-ps31   Vmn2r-ps32   Vmn2r-ps34  
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm396124,001,717 - 124,038,994 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl6124,001,527 - 124,042,765 (+)EnsemblGRCm39 Ensembl
GRCm386124,024,758 - 124,062,035 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl6124,024,568 - 124,065,806 (+)EnsemblGRCm38mm10GRCm38
MGSCv376123,974,776 - 124,012,053 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv366123,990,377 - 124,027,654 (+)NCBIMGSCv36mm8
Celera6125,714,692 - 125,752,044 (+)NCBICelera
Cytogenetic Map6F2NCBI
cM Map659.06NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component
plasma membrane  (IBA,IEA)

Molecular Function

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
References

References - curated
# Reference Title Reference Citation
1. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:9292726   PMID:12354396   PMID:16805845   PMID:17382427   PMID:19935653   PMID:21677750   PMID:21873635   PMID:23664818   PMID:24614745   PMID:29465786   PMID:34433575  


Genomics

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:52
Count of miRNA genes:50
Interacting mature miRNAs:52
Transcripts:ENSMUST00000032238
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
4142079Skmw15_mskeletal muscle weight 15 (mouse)Not determined6116829851149588044Mouse
10043864T2dm4sa_mtype 2 diabetes mellitus 4 in SMXA RI mice (mouse)Not determined683690851146954059Mouse
11252138Clas1_mcarcinogen-induced lung adenoma susceptibility 1 (mouse)6112246918146954059Mouse
1300887Pabr1_mplasma apolipoprotein B (human) regulator 1 (mouse)Not determined6103754405136400690Mouse
1301915Chab3_mcholesterol absorption 3 (mouse)Not determined698908709132916997Mouse
1301083Bhr5_mbronchial hyperresponsiveness 5 (mouse)Not determined6115694477132578150Mouse
1301658Radpf3_mradiation pulmonary fibrosis 3 (mouse)Not determined6115219814146330736Mouse
10043923Bhr7_mbronchial hyperresponsiveness 7 (mouse)Not determined698219814132219938Mouse
4141940W6q5_mweight 6 weeks QTL 5 (mouse)Not determined96632912146535124Mouse
4140980Mvwf2_mmodifier of von Willebrand factor 2 (mouse)Not determined114345693145601739Mouse
4142259Tabw2_mtally ho associated body weight 2 (mouse)Not determined46912919136400690Mouse
25314319Histh6_mhistamine hypersensitivity 6 (mouse)648696934125336963Mouse
4141295Rua_mraffinose acetate tasting (mouse)Not determined115546805149549364Mouse
25314320Histh5_mhistamine hypersensitivity 5 (mouse)648696934148351498Mouse
1301509Sluc3_msusceptibility to lung cancer 3 (mouse)Not determined6104480321127019938Mouse
1301962Eila2_methanol induced locomotor activity 2 (mouse)Not determined648703490125333748Mouse
1301518Bbaa5_mB.burgdorferi-associated arthritis 5 (mouse)Not determined698483798145881170Mouse
11353842Bmiq4_mbody mass index QTL 4 (mouse)692584287146330736Mouse
1302131Bmd8_mbone mineral density 8 (mouse)Not determined699132089133132228Mouse
10412157Fl1n_mfatty liver 1 in NSY (mouse)Not determined645290993128811995Mouse
26884414Bzwq12_mbi-zygomatic width QTL 12, 16 week (mouse)63400000139076998Mouse
1357555Tesq2_mtestis weight QTL 2 (mouse)Not determined696632912146535124Mouse
10043891Tilss4_mTNF-induced lethal shock susceptibility 3 (mouse)Not determined6112246918125333748Mouse
1301244Ichs_mimmediate cutaneous hypersensitivity QTL (mouse)Not determined690772571124772807Mouse
4142416Egq11_mearly growth QTL 11 (mouse)Not determined96632912146535124Mouse
1301923Lith6_mlithogenic gene 6 (mouse)Not determined698694477132694676Mouse
10412207Cypr5_mcytokine production 5 (mouse)Not determined6110815180144815323Mouse
1300704Cia3_mcollagen induced arthritis QTL 3 (mouse)Not determined696324286130324483Mouse
1301152Athsq2_matherosclerosis susceptibility QTL 2 (mouse)Not determined6117059949149588044Mouse
13463481Mcvq14_mmean corpuscular volume QTL 14 (mouse)6111142448145142541Mouse
1301927Etohcta6_methanol conditioned taste aversion 6 (mouse)Not determined6115578005149578150Mouse
4141194Cyx_mcycloheximide tasting (mouse)Not determined115546805149549364Mouse
4141064Ath37_matherosclerosis 37 (mouse)Not determined6116641858128495988Mouse
1357806Aaj3_manxiety in A/J 3 (mouse)Not determined6104480321136400690Mouse
13506930Recrq9_mrecombination rate in male meiosis QTL 9 (mouse)673476983134676963Mouse
4141889Qui_mquinine sensitivity, taste (mouse)Not determined115546805149549364Mouse
1301292Cfbw2_mcystic fibrosis body weight 2 (mouse)Not determined694981612128981699Mouse
11040599Lmr4b_mleishmaniasis resistance 4b (mouse)696324286130324483Mouse
1301804Bulb2_mbulb size 2 (mouse)Not determined6120416806149588044Mouse


Expression

RNA-SEQ Expression


Sequence


Ensembl Acc Id: ENSMUST00000032238   ⟹   ENSMUSP00000032238
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl6124,001,527 - 124,042,765 (+)Ensembl
GRCm38.p6 Ensembl6124,024,568 - 124,065,806 (+)Ensembl
Ensembl Acc Id: ENSMUST00000232707   ⟹   ENSMUSP00000156965
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl6124,001,527 - 124,042,765 (+)Ensembl
GRCm38.p6 Ensembl6124,024,568 - 124,065,806 (+)Ensembl
Ensembl Acc Id: ENSMUST00000233955   ⟹   ENSMUSP00000156611
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl6124,001,527 - 124,042,765 (+)Ensembl
GRCm38.p6 Ensembl6124,024,568 - 124,065,806 (+)Ensembl
RefSeq Acc Id: NM_019917   ⟹   NP_064301
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm396124,001,717 - 124,038,994 (+)NCBI
GRCm386124,024,758 - 124,062,035 (+)ENTREZGENE
MGSCv376123,974,776 - 124,012,053 (+)RGD
Celera6125,714,692 - 125,752,044 (+)RGD
cM Map6 ENTREZGENE
Sequence:
Protein Sequences
Protein RefSeqs NP_064301 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAC08412 (Get FASTA)   NCBI Sequence Viewer  
  AAR04436 (Get FASTA)   NCBI Sequence Viewer  
  EDK99727 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSMUSP00000032238
  ENSMUSP00000032238.4
  ENSMUSP00000156611.2
  ENSMUSP00000156965.2
GenBank Protein Q6TAC4 (Get FASTA)   NCBI Sequence Viewer  
RefSeq Acc Id: NP_064301   ⟸   NM_019917
- Peptide Label: precursor
- UniProtKB: O70409 (UniProtKB/Swiss-Prot),   Q6TAC4 (UniProtKB/Swiss-Prot)
- Sequence:
Ensembl Acc Id: ENSMUSP00000032238   ⟸   ENSMUST00000032238
Ensembl Acc Id: ENSMUSP00000156611   ⟸   ENSMUST00000233955
Ensembl Acc Id: ENSMUSP00000156965   ⟸   ENSMUST00000232707
Protein Domains
Receptor ligand binding region

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q6TAC4-F1-model_v2 AlphaFold Q6TAC4 1-855 view protein structure


Additional Information

Database Acc Id Source(s)
AGR Gene MGI:2678394 AgrOrtholog
Ensembl Genes ENSMUSG00000096630 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000032238 ENTREZGENE
  ENSMUST00000032238.5 UniProtKB/Swiss-Prot
  ENSMUST00000232707.2 UniProtKB/TrEMBL
  ENSMUST00000233955.2 UniProtKB/TrEMBL
Gene3D-CATH 2.10.50.30 UniProtKB/Swiss-Prot
  3.40.50.2300 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro ANF_lig-bd_rcpt UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  GPCR_3 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  GPCR_3_9-Cys_dom UniProtKB/Swiss-Prot
  GPCR_3_9-Cys_sf UniProtKB/Swiss-Prot
  GPCR_3_C UniProtKB/Swiss-Prot
  GPCR_3_Ca_sens_rcpt-rel UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  GPCR_3_CS UniProtKB/Swiss-Prot
  GPCR_3_vmron_rcpt_2 UniProtKB/Swiss-Prot
  Peripla_BP_I UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:56552 UniProtKB/Swiss-Prot
MGD MGI:2678394 ENTREZGENE
NCBI Gene 56552 ENTREZGENE
PANTHER PTHR24061 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  VOMERONASAL 2, RECEPTOR 23-RELATED UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam 7tm_3 UniProtKB/Swiss-Prot
  ANF_receptor UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  NCD3G UniProtKB/Swiss-Prot
PhenoGen Vmn2r26 PhenoGen
PRINTS GPCRMGR UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  VOMERONASL2R UniProtKB/Swiss-Prot
PROSITE G_PROTEIN_RECEP_F3_3 UniProtKB/Swiss-Prot
  G_PROTEIN_RECEP_F3_4 UniProtKB/Swiss-Prot
Superfamily-SCOP SSF53822 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt A0A3B2WCP5_MOUSE UniProtKB/TrEMBL
  A0A3B2WDC3_MOUSE UniProtKB/TrEMBL
  O70409 ENTREZGENE
  Q6TAC4 ENTREZGENE, UniProtKB/Swiss-Prot
UniProt Secondary O70409 UniProtKB/Swiss-Prot