Fancg (Fanconi anemia, complementation group G) - Rat Genome Database

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Gene: Fancg (Fanconi anemia, complementation group G) Mus musculus
Analyze
Symbol: Fancg
Name: Fanconi anemia, complementation group G
RGD ID: 1618385
MGI Page MGI
Description: Acts upstream of or within several processes, including DNA damage response; ovarian follicle development; and spermatid development. Predicted to be located in several cellular components, including chromatin; mitochondrion; and nucleolus. Predicted to be part of Fanconi anaemia nuclear complex. Is expressed in gut dorsal mesentery and reproductive system. Human ortholog(s) of this gene implicated in Fanconi anemia; Fanconi anemia complementation group G; and pancreatic cancer. Orthologous to human FANCG (FA complementation group G).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: AU041407; Fanconi anemia group G protein homolog; MGC176243; Xrcc; Xrcc9
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39443,002,337 - 43,010,565 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl443,002,343 - 43,010,506 (-)EnsemblGRCm39 Ensembl
GRCm38443,002,337 - 43,010,567 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl443,002,343 - 43,010,506 (-)EnsemblGRCm38mm10GRCm38
MGSCv37443,015,209 - 43,023,173 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36443,024,046 - 43,031,210 (-)NCBIMGSCv36mm8
Celera443,032,492 - 43,040,378 (-)NCBICelera
Cytogenetic Map4A5NCBI
cM Map422.97NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

Phenotype Annotations     Click to see Annotation Detail View
References

References - curated
# Reference Title Reference Citation
1. OMIM Disease Annotation Pipeline OMIM Disease Annotation Pipeline
2. Mouse MP Annotation Import Pipeline RGD automated import pipeline
3. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
4. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
5. In vivo therapeutic responses contingent on Fanconi anemia/BRCA2 status of the tumor. van der Heijden MS, etal., Clin Cancer Res. 2005 Oct 15;11(20):7508-15.
6. Downregulation of Fanconi anemia genes in sporadic head and neck squamous cell carcinoma. Wreesmann VB, etal., ORL J Otorhinolaryngol Relat Spec. 2007;69(4):218-25. Epub 2007 Apr 4.
Additional References at PubMed
PMID:10725249   PMID:10922068   PMID:10951504   PMID:11093276   PMID:11719385   PMID:11823446   PMID:11918676   PMID:12135664   PMID:12360237   PMID:12466851   PMID:12477932   PMID:12627171  
PMID:12861027   PMID:14610273   PMID:15319283   PMID:15657175   PMID:15970507   PMID:16946306   PMID:17431503   PMID:18239686   PMID:18799693   PMID:19129541   PMID:20606166   PMID:20921626  
PMID:21118969   PMID:21209924   PMID:21267068   PMID:21677750   PMID:21873635   PMID:21968513   PMID:22036606   PMID:23806336   PMID:24799500   PMID:28341737   PMID:37446306  


Genomics

Comparative Map Data
Fancg
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39443,002,337 - 43,010,565 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl443,002,343 - 43,010,506 (-)EnsemblGRCm39 Ensembl
GRCm38443,002,337 - 43,010,567 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl443,002,343 - 43,010,506 (-)EnsemblGRCm38mm10GRCm38
MGSCv37443,015,209 - 43,023,173 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36443,024,046 - 43,031,210 (-)NCBIMGSCv36mm8
Celera443,032,492 - 43,040,378 (-)NCBICelera
Cytogenetic Map4A5NCBI
cM Map422.97NCBI
FANCG
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38935,073,839 - 35,079,942 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl935,073,835 - 35,080,004 (-)EnsemblGRCh38hg38GRCh38
GRCh37935,073,836 - 35,079,939 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36935,063,835 - 35,070,013 (-)NCBINCBI36Build 36hg18NCBI36
Build 34935,063,834 - 35,070,013NCBI
Celera935,005,802 - 35,011,980 (-)NCBICelera
Cytogenetic Map9p13.3NCBI
HuRef935,029,423 - 35,035,601 (-)NCBIHuRef
CHM1_1935,073,701 - 35,079,879 (-)NCBICHM1_1
T2T-CHM13v2.0935,093,018 - 35,099,121 (-)NCBIT2T-CHM13v2.0
Fancg
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8562,027,494 - 62,037,202 (-)NCBIGRCr8
mRatBN7.2557,230,287 - 57,240,067 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl557,231,685 - 57,240,029 (-)EnsemblmRatBN7.2 Ensembl
Rnor_6.0558,448,060 - 58,456,416 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl558,448,822 - 58,455,819 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0562,974,576 - 62,982,169 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4559,494,640 - 59,501,785 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera555,821,014 - 55,828,787 (-)NCBICelera
Cytogenetic Map5q22NCBI
Fancg
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554721,098,839 - 1,104,911 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554721,097,986 - 1,105,836 (+)NCBIChiLan1.0ChiLan1.0
FANCG
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21189,509,683 - 89,516,004 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1989,516,209 - 89,521,944 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0934,924,399 - 34,931,077 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1935,730,176 - 35,736,648 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl935,730,176 - 35,736,648 (-)Ensemblpanpan1.1panPan2
FANCG
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11151,652,939 - 51,659,766 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1151,652,944 - 51,659,751 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1150,221,745 - 50,228,574 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01152,718,404 - 52,725,238 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1152,718,405 - 52,725,223 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11151,262,486 - 51,269,312 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01151,247,632 - 51,254,447 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01151,949,490 - 51,956,319 (-)NCBIUU_Cfam_GSD_1.0
Fancg
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024404947166,556,295 - 166,562,735 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365243,104,176 - 3,109,779 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365243,103,912 - 3,110,246 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
FANCG
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1235,871,075 - 235,877,974 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11235,871,073 - 235,879,604 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21263,531,711 - 263,538,609 (+)NCBISscrofa10.2Sscrofa10.2susScr3
FANCG
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11245,537,817 - 45,544,038 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1245,538,303 - 45,543,766 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366603842,654,533 - 42,660,809 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Fancg
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_004624915272,605 - 278,145 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_004624915271,166 - 278,608 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Fancg
551 total Variants
miRNA Target Status (No longer updated)

Predicted Target Of
Summary Value
Count of predictions:1525
Count of miRNA genes:672
Interacting mature miRNAs:843
Transcripts:ENSMUST00000030165, ENSMUST00000123332, ENSMUST00000124645, ENSMUST00000125570, ENSMUST00000127067, ENSMUST00000132273, ENSMUST00000133915, ENSMUST00000134083, ENSMUST00000135362, ENSMUST00000148018
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1301203Alcp8_malcohol preference locus 8 (mouse)Not determined41739516051395290Mouse
1301586Stheal3_msoft tissue heal 3 (mouse)Not determined42865844262658566Mouse
10401115Pgia35_mproteoglycan induced arthritis 35 (mouse)Not determined41256237746562509Mouse
39128211Lwq22_mliver weight QTL 22 (mouse)41789261688982216Mouse
1301786Bpq3_mblood pressure QTL 3 (mouse)Not determined44240224076402381Mouse
4141555Nbwa2_mNZB and NZW autoimmunity 2 (mouse)Not determined41789251551892635Mouse
10412178Habiir2_mhyperoxic acute lung injury imprinted region 2 (mouse)Not determined43945212663283678Mouse
1300574Im2_mimmunoregulatory 2 (mouse)Not determined42807768262077816Mouse
12880405Jcdq1_mjoint cartilage degeneration QTL 1 (mouse)41256237746562509Mouse
4142318Lyr2_mlymphoma resistance 2 (mouse)Not determined1401045763283678Mouse
1301697Sluc18_msusceptibility to lung cancer 18 (mouse)Not determined42237344856373612Mouse
1357453Kidq4_mkidney weight QTL 4 (mouse)Not determined41789261688982216Mouse
4142047Mvwf3_mmodifier of von Willebrand factor 3 (mouse)Not determined14010457117072206Mouse
11567249Elorr3_methanol induced loss of righting response 3 (mouse)43722677156268235Mouse
1357877Synch1_msynechia 1 (mouse)Not determined42870992562710107Mouse
1300977Mopkd1_mmodifier of polycystic kidney disease progression 1 (mouse)Not determined43655083970550967Mouse
25440481Moaq1_mmodifier of alien QTL 1 (mouse)41950000046000000Mouse
1301237Alcp7_malcohol preference locus 7 (mouse)Not determined41739516051395290Mouse
4141911W6q15_mweight 6 weeks QTL 15 (mouse)Not determined1789261688982216Mouse
1302075Bdln6_mbody length 6 (mouse)Not determined42237344856373612Mouse
4142290Ssrq9_mstress response QTL 9 (mouse)Not determined3439516046332776Mouse
1301437Scon1_msucrose consumption 1 (mouse)Not determined42237344856373612Mouse
10401905Sicd3_mseizure-induced cell death 3 (mouse)Not determined4939552543760862Mouse
1300769Pcyts2_mplasmacytoma susceptibility 2 (mouse)Not determined42211194456112145Mouse
1301792Hdlq10_mHDL QTL 10 (mouse)Not determined43585970769859853Mouse
1301990Arvm1_mautoimmune renal vasculitis 1 (mouse)Not determined42933264663332776Mouse
1302116Bbaa1_mB.burgdorferi-associated arthritis 1 (mouse)Not determined43825093072251078Mouse
1302058Hrtfm3_mheart failure modifier 3 (mouse)Not determined42211194456112145Mouse
1302184Aaom1_mautoimmune aoritis in MRL mice 1 (mouse)Not determined42432229946332776Mouse
26884449Sklq2_mskull length QTL 2, 5 week (mouse)436700000128993793Mouse
27226724Tibw2_mtibia width 2, proximal, 10 week (mouse)443000000108357197Mouse

Markers in Region
AU041407  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38443,002,425 - 43,002,578UniSTSGRCm38
MGSCv37443,015,297 - 43,015,450UniSTSGRCm37
Celera443,032,580 - 43,032,733UniSTS
Cytogenetic Map4B1UniSTS
Whitehead/MRC_RH4674.13UniSTS
Fancg  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map4B1UniSTS
cM Map422.97UniSTS


Expression

RNA-SEQ Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001163233 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001426198 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001426199 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001426200 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001426201 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001426202 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001426203 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001426204 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001426205 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001426206 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_053081 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NR_189671 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NR_189672 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NR_189673 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NR_189674 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NR_189675 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NR_189676 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_001784169 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_001784171 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_001784173 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_001784174 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_003954992 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_390334 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_390335 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_390336 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC005259 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF112439 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AH011363 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL672276 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AY049715 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC050890 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC139763 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC141282 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BE292126 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BY350437 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466565 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSMUST00000030165   ⟹   ENSMUSP00000030165
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl443,002,343 - 43,010,355 (-)Ensembl
GRCm38.p6 Ensembl443,002,343 - 43,010,355 (-)Ensembl
Ensembl Acc Id: ENSMUST00000123332
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl443,002,343 - 43,010,488 (-)Ensembl
GRCm38.p6 Ensembl443,002,343 - 43,010,488 (-)Ensembl
Ensembl Acc Id: ENSMUST00000124645
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl443,003,011 - 43,006,466 (-)Ensembl
GRCm38.p6 Ensembl443,003,011 - 43,006,466 (-)Ensembl
Ensembl Acc Id: ENSMUST00000125570
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl443,003,913 - 43,006,779 (-)Ensembl
GRCm38.p6 Ensembl443,003,913 - 43,006,779 (-)Ensembl
Ensembl Acc Id: ENSMUST00000127067
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl443,003,260 - 43,006,511 (-)Ensembl
GRCm38.p6 Ensembl443,003,260 - 43,006,511 (-)Ensembl
Ensembl Acc Id: ENSMUST00000132273
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl443,010,043 - 43,010,506 (-)Ensembl
GRCm38.p6 Ensembl443,010,043 - 43,010,506 (-)Ensembl
Ensembl Acc Id: ENSMUST00000133915
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl443,009,158 - 43,010,222 (-)Ensembl
GRCm38.p6 Ensembl443,009,158 - 43,010,222 (-)Ensembl
Ensembl Acc Id: ENSMUST00000134083
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl443,005,221 - 43,009,153 (-)Ensembl
GRCm38.p6 Ensembl443,005,221 - 43,009,153 (-)Ensembl
Ensembl Acc Id: ENSMUST00000135362
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl443,009,067 - 43,010,170 (-)Ensembl
GRCm38.p6 Ensembl443,009,067 - 43,010,170 (-)Ensembl
Ensembl Acc Id: ENSMUST00000148018
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl443,002,922 - 43,003,932 (-)Ensembl
GRCm38.p6 Ensembl443,002,922 - 43,003,932 (-)Ensembl
RefSeq Acc Id: NM_001163233   ⟹   NP_001156705
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39443,002,343 - 43,010,520 (-)NCBI
GRCm38443,002,337 - 43,010,301 (-)NCBI
MGSCv37443,015,209 - 43,023,173 (-)RGD
Celera443,032,492 - 43,040,378 (-)RGD
cM Map4 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_001426198   ⟹   NP_001413127
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39443,002,343 - 43,010,520 (-)NCBI
RefSeq Acc Id: NM_001426199   ⟹   NP_001413128
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39443,002,343 - 43,010,520 (-)NCBI
RefSeq Acc Id: NM_001426200   ⟹   NP_001413129
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39443,002,343 - 43,010,520 (-)NCBI
RefSeq Acc Id: NM_001426201   ⟹   NP_001413130
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39443,002,343 - 43,010,520 (-)NCBI
RefSeq Acc Id: NM_001426202   ⟹   NP_001413131
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39443,002,343 - 43,010,520 (-)NCBI
RefSeq Acc Id: NM_001426203   ⟹   NP_001413132
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39443,002,343 - 43,010,520 (-)NCBI
RefSeq Acc Id: NM_001426204   ⟹   NP_001413133
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39443,002,343 - 43,010,520 (-)NCBI
RefSeq Acc Id: NM_001426205   ⟹   NP_001413134
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39443,002,343 - 43,005,904 (-)NCBI
RefSeq Acc Id: NM_001426206   ⟹   NP_001413135
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39443,002,343 - 43,005,904 (-)NCBI
RefSeq Acc Id: NM_053081   ⟹   NP_444311
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39443,002,343 - 43,010,520 (-)NCBI
GRCm38443,002,337 - 43,010,301 (-)NCBI
MGSCv37443,015,209 - 43,023,173 (-)RGD
Celera443,032,492 - 43,040,378 (-)RGD
cM Map4 ENTREZGENE
Sequence:
RefSeq Acc Id: NR_189671
RefSeq Status: VALIDATED
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39443,002,343 - 43,010,520 (-)NCBI
RefSeq Acc Id: NR_189672
RefSeq Status: VALIDATED
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39443,002,343 - 43,010,520 (-)NCBI
RefSeq Acc Id: NR_189673
RefSeq Status: VALIDATED
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39443,002,343 - 43,010,520 (-)NCBI
RefSeq Acc Id: NR_189674
RefSeq Status: VALIDATED
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39443,002,343 - 43,010,520 (-)NCBI
RefSeq Acc Id: NR_189675
RefSeq Status: VALIDATED
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39443,002,343 - 43,010,520 (-)NCBI
RefSeq Acc Id: NR_189676
RefSeq Status: VALIDATED
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39443,002,343 - 43,010,520 (-)NCBI
RefSeq Acc Id: XR_001784169
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39443,002,337 - 43,010,565 (-)NCBI
GRCm38443,002,337 - 43,010,566 (-)NCBI
Sequence:
RefSeq Acc Id: XR_001784171
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39443,002,337 - 43,010,565 (-)NCBI
GRCm38443,002,337 - 43,010,565 (-)NCBI
Sequence:
RefSeq Acc Id: XR_001784173
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39443,002,337 - 43,010,565 (-)NCBI
GRCm38443,002,337 - 43,010,566 (-)NCBI
Sequence:
RefSeq Acc Id: XR_001784174
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39443,002,337 - 43,010,565 (-)NCBI
GRCm38443,002,337 - 43,010,566 (-)NCBI
Sequence:
RefSeq Acc Id: XR_003954992
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39443,002,337 - 43,010,564 (-)NCBI
GRCm38443,002,337 - 43,010,565 (-)NCBI
Sequence:
RefSeq Acc Id: XR_390334
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39443,003,035 - 43,010,565 (-)NCBI
GRCm38443,002,337 - 43,010,566 (-)NCBI
Sequence:
RefSeq Acc Id: XR_390335
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39443,002,337 - 43,010,565 (-)NCBI
GRCm38443,002,337 - 43,010,565 (-)NCBI
Sequence:
RefSeq Acc Id: XR_390336
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39443,002,337 - 43,010,565 (-)NCBI
GRCm38443,002,337 - 43,010,565 (-)NCBI
Sequence:
RefSeq Acc Id: NP_444311   ⟸   NM_053081
- Peptide Label: isoform 1
- UniProtKB: A2AG34 (UniProtKB/Swiss-Prot),   Q9EQR6 (UniProtKB/Swiss-Prot),   B9EJ17 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001156705   ⟸   NM_001163233
- Peptide Label: isoform 2
- UniProtKB: A4QPC9 (UniProtKB/TrEMBL),   B9EJ17 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSMUSP00000030165   ⟸   ENSMUST00000030165
RefSeq Acc Id: NP_001413128   ⟸   NM_001426199
- Peptide Label: isoform 1
- UniProtKB: Q9EQR6 (UniProtKB/Swiss-Prot),   A2AG34 (UniProtKB/Swiss-Prot),   B9EJ17 (UniProtKB/TrEMBL)
RefSeq Acc Id: NP_001413129   ⟸   NM_001426200
- Peptide Label: isoform 2
- UniProtKB: A4QPC9 (UniProtKB/TrEMBL),   B9EJ17 (UniProtKB/TrEMBL)
RefSeq Acc Id: NP_001413133   ⟸   NM_001426204
- Peptide Label: isoform 4
- UniProtKB: B9EJ17 (UniProtKB/TrEMBL)
RefSeq Acc Id: NP_001413127   ⟸   NM_001426198
- Peptide Label: isoform 1
- UniProtKB: Q9EQR6 (UniProtKB/Swiss-Prot),   A2AG34 (UniProtKB/Swiss-Prot),   B9EJ17 (UniProtKB/TrEMBL)
RefSeq Acc Id: NP_001413130   ⟸   NM_001426201
- Peptide Label: isoform 2
- UniProtKB: A4QPC9 (UniProtKB/TrEMBL),   B9EJ17 (UniProtKB/TrEMBL)
RefSeq Acc Id: NP_001413131   ⟸   NM_001426202
- Peptide Label: isoform 3
- UniProtKB: B9EJ17 (UniProtKB/TrEMBL)
RefSeq Acc Id: NP_001413132   ⟸   NM_001426203
- Peptide Label: isoform 4
- UniProtKB: B9EJ17 (UniProtKB/TrEMBL)
RefSeq Acc Id: NP_001413134   ⟸   NM_001426205
- Peptide Label: isoform 5
RefSeq Acc Id: NP_001413135   ⟸   NM_001426206
- Peptide Label: isoform 5

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q9EQR6-F1-model_v2 AlphaFold Q9EQR6 1-623 view protein structure

Promoters
RGD ID:6883180
Promoter ID:EPDNEW_M5041
Type:initiation region
Name:Fancg_1
Description:Mus musculus Fanconi anemia, complementation group G , transcriptvariant 1, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M5042  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38443,010,232 - 43,010,292EPDNEW
RGD ID:6883182
Promoter ID:EPDNEW_M5042
Type:multiple initiation site
Name:Fancg_2
Description:Mus musculus Fanconi anemia, complementation group G , transcriptvariant 1, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M5041  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38443,010,506 - 43,010,566EPDNEW
RGD ID:6835305
Promoter ID:MM_KWN:37305
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   ES_Cell,   MEF_B4
Transcripts:NM_001163233,   OTTMUST00000015329,   OTTMUST00000015341,   OTTMUST00000015342,   OTTMUST00000015343,   OTTMUST00000015348,   UC008SOU.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36443,022,936 - 43,023,436 (-)MPROMDB

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:1926471 AgrOrtholog
Ensembl Genes ENSMUSG00000028453 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript ENSMUST00000030165 ENTREZGENE
  ENSMUST00000030165.5 UniProtKB/Swiss-Prot
  ENSMUST00000123332 ENTREZGENE
Gene3D-CATH 1.25.40.10 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro FANCG UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  TPR-like_helical_dom_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  TPR_repeat UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:60534 UniProtKB/Swiss-Prot
MGD MGI:1926471 ENTREZGENE
NCBI Gene 60534 ENTREZGENE
PANTHER FANCONI ANEMIA GROUP G PROTEIN UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PTHR15254 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Fancg PhenoGen
PROSITE TPR_REGION UniProtKB/Swiss-Prot
SMART TPR UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF48452 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt A2AG34 ENTREZGENE
  A4QPC9 ENTREZGENE, UniProtKB/TrEMBL
  B9EJ17 ENTREZGENE, UniProtKB/TrEMBL
  FANCG_MOUSE UniProtKB/Swiss-Prot
  Q80X51_MOUSE UniProtKB/TrEMBL
  Q8VHS1_MOUSE UniProtKB/TrEMBL
  Q9EQR6 ENTREZGENE
UniProt Secondary A2AG34 UniProtKB/Swiss-Prot