Ncmap (noncompact myelin associated protein) - Rat Genome Database

Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Advanced Search (OLGA)
Gene: Ncmap (noncompact myelin associated protein) Mus musculus
Analyze
Symbol: Ncmap
Name: noncompact myelin associated protein
RGD ID: 1618155
MGI Page MGI
Description: Predicted to be a structural constituent of myelin sheath. Predicted to be involved in peripheral nervous system myelin formation and positive regulation of myelination. Located in plasma membrane. Is expressed in several structures, including alimentary system; hindlimb mesenchyme; lower urinary tract; otic capsule; and skeleton. Orthologous to human NCMAP (non-compact myelin associated protein).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: A330049M08Rik; AA545175; Mp11; myelin glycoprotein 11; myelin protein of 11 kDa; noncompact myelin-associated protein; RP23-332E2.1; uncharacterized protein C1orf130 homolog
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm394135,096,887 - 135,125,551 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl4135,096,887 - 135,125,538 (-)EnsemblGRCm39 Ensembl
GRCm384135,369,576 - 135,398,240 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl4135,369,576 - 135,398,227 (-)EnsemblGRCm38mm10GRCm38
MGSCv374134,925,492 - 134,954,142 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv364134,641,986 - 134,670,297 (-)NCBIMGSCv36mm8
Celera4133,570,079 - 133,598,716 (-)NCBICelera
Cytogenetic Map4D3NCBI
cM Map467.47NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
2. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:10349636   PMID:11042159   PMID:11076861   PMID:11217851   PMID:12466851   PMID:12477932   PMID:14610273   PMID:15489334   PMID:16141072   PMID:16141073   PMID:16602821   PMID:18650334  
PMID:18799693   PMID:21267068   PMID:21873635   PMID:22967998   PMID:38355793  


Genomics

Comparative Map Data
Ncmap
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm394135,096,887 - 135,125,551 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl4135,096,887 - 135,125,538 (-)EnsemblGRCm39 Ensembl
GRCm384135,369,576 - 135,398,240 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl4135,369,576 - 135,398,227 (-)EnsemblGRCm38mm10GRCm38
MGSCv374134,925,492 - 134,954,142 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv364134,641,986 - 134,670,297 (-)NCBIMGSCv36mm8
Celera4133,570,079 - 133,598,716 (-)NCBICelera
Cytogenetic Map4D3NCBI
cM Map467.47NCBI
NCMAP
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38124,556,087 - 24,609,328 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl124,556,087 - 24,609,328 (+)EnsemblGRCh38hg38GRCh38
GRCh37124,882,578 - 24,935,819 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36124,755,189 - 24,808,403 (+)NCBINCBI36Build 36hg18NCBI36
Celera123,249,057 - 23,262,966 (+)NCBICelera
Cytogenetic Map1p36.11NCBI
HuRef123,137,966 - 23,192,211 (+)NCBIHuRef
CHM1_1124,995,150 - 25,048,739 (+)NCBICHM1_1
T2T-CHM13v2.0124,394,472 - 24,447,710 (+)NCBIT2T-CHM13v2.0
Ncmap
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr85152,893,173 - 152,921,175 (-)NCBIGRCr8
mRatBN7.25147,608,042 - 147,623,266 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl5147,610,677 - 147,618,775 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx5150,311,975 - 150,320,078 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.05152,083,387 - 152,091,518 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.05152,068,255 - 152,076,358 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.05153,729,250 - 153,737,161 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl5153,729,250 - 153,737,161 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.05157,500,153 - 157,507,291 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.45154,163,766 - 154,167,138 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera5146,020,607 - 146,028,744 (-)NCBICelera
Cytogenetic Map5q36NCBI
Ncmap
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554524,334,590 - 4,374,388 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554524,335,411 - 4,380,972 (+)NCBIChiLan1.0ChiLan1.0
NCMAP
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21202,321,973 - 202,335,505 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11201,426,763 - 201,438,999 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0123,759,047 - 23,809,495 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1124,738,804 - 24,789,114 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl124,777,120 - 24,790,383 (+)Ensemblpanpan1.1panPan2
NCMAP
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1275,070,862 - 75,083,652 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha271,644,434 - 71,667,975 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0275,632,444 - 75,650,352 (-)NCBIROS_Cfam_1.0
UMICH_Zoey_3.1272,455,021 - 72,478,559 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0273,462,109 - 73,479,979 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0274,466,440 - 74,484,344 (-)NCBIUU_Cfam_GSD_1.0
Ncmap
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440505843,674,796 - 43,714,079 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049364749,507,150 - 9,539,543 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049364749,507,203 - 9,538,969 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
NCMAP
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl682,186,368 - 82,281,641 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1682,242,371 - 82,283,887 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2675,941,369 - 75,980,795 (+)NCBISscrofa10.2Sscrofa10.2susScr3
NCMAP
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.120108,087,270 - 108,129,490 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl20108,092,406 - 108,100,358 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_0236660338,220,151 - 8,271,279 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Ncmap
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247648,947,155 - 8,983,717 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247648,947,138 - 8,983,740 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Ncmap
2164 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:1803
Count of miRNA genes:473
Interacting mature miRNAs:532
Transcripts:ENSMUST00000064481, ENSMUST00000105857, ENSMUST00000105858, ENSMUST00000105859, ENSMUST00000105860, ENSMUST00000123632, ENSMUST00000134717, ENSMUST00000154518
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1301267Bcmd2_mB cell maturation defect 2 (mouse)Not determined4133154678150789451Mouse
4142139Adip12_madiposity 12 (mouse)Not determined4124621281156860686Mouse
10047132Albq19_malbuminuria QTL 19 (mouse)Not determined4112824389146824389Mouse
1301525Lmb1_mlupus in MRL and B6 F2 cross (mouse)Not determined4124264957150676858Mouse
14746982Manh56_mmandible shape 56 (mouse)4117815917151815917Mouse
4141623W6q13_mweight 6 weeks QTL 13 (mouse)Not determined88982069140468203Mouse
12910797Pwgrq4_mpre-weaning growth rate QTL 4 (mouse)4105835310141433838Mouse
25314312Syncl2_msynaptonemal complex length 2 (mouse)465718237146584457Mouse
12910794Pwbwq8_mpost-weaning body weight QTL 8 (mouse)4105835310141433838Mouse
1300743Skull6_mskull morphology 6 (mouse)Not determined4111009051145009280Mouse
1301382Arvm2_mautoimmune renal vasculitis 2 (mouse)Not determined4107791564141791756Mouse
1302149Tlsr2_mthymic lymphoma suppressor region 2 (mouse)Not determined4124264957142230960Mouse
12910813Pwbwq4_mpre-weaning body weight QTL 4 (mouse)4105835310141433838Mouse
1300874Gasa2_mgastritis type A susceptibility locus 2 (mouse)Not determined4133010494156860686Mouse
4141093W3q17_mweight 3 weeks QTL 17 (mouse)Not determined88982069140468203Mouse
27226757Femd1_mfemur midshaft diameter 1, 5 week (mouse)4123993793144326570Mouse
12910808Pwbwq9_mpost-weaning body weight QTL 9 (mouse)4105835310141433838Mouse
1300621Tpnr1_mthermal pain response 1 (mouse)Not determined4125230872156860686Mouse
11567249Elorr3_methanol induced loss of righting response 3 (mouse)43722677156268235Mouse
4142493Femwf13_mfemur work to failure 13 (mouse)Not determined116154678150154782Mouse
1301815Sles2_msystemic lupus erythmatosus suppressor 2 (mouse)Not determined494957579150676858Mouse
1300663Start2_mstartle response 2 (mouse)Not determined4107264957141265153Mouse
1300917Gasa1_mgastritis type A susceptibility locus 1 (mouse)Not determined4124055093142438020Mouse
1300537Ap3q_malcohol preference 3 QTL (mouse)Not determined4134654451156860686Mouse
1301823Bmd7_mbone mineral density 7 (mouse)Not determined488982069151654550Mouse
10412210Cypr6_mcytokine production 6 (mouse)Not determined4120617848154617995Mouse
1302078Sluc21_msusceptibility to lung cancer 21 (mouse)Not determined4117401141151401275Mouse
10045620Heal22_mwound healing/regeneration 22 (mouse)Not determined4125230872156860686Mouse
4142481Gct1_mgranulosa cell tumorigenesis 1 (mouse)Not determined4127784226156860686Mouse
1301793Tlsr3_mthymic lymphoma suppressor region 3 (mouse)Not determined4129465811136864536Mouse
4141065Shali2_msurvival time to hyperoxic acute lung injury 2 (mouse)Not determined124055093141572792Mouse
13503348Bntq18_mbone traits QTL 18 (mouse)4120617848154617995Mouse
13208562Wght7_mweight 7 (mouse)490888237148084457Mouse
4142082Psds2_mpsoriasis-like skin disease severity 2 (mouse)Not determined4133154678137617995Mouse
1300781Lith8_mlithogenic gene 8 (mouse)Not determined4107264957141265153Mouse
39128212Lwq21_mliver weight QTL 21 (mouse)488982069140468203Mouse
4142077Ignpq2_mIgA nephropathy QTL 2 (mouse)Not determined4133676733156860686Mouse
1301584Lrdg2_mlight induced retinal degeneration 2 (mouse)Not determined4129465811151654550Mouse
4141180Ssic1_msusceptibility to small intestinal cancer 1 (mouse)Not determined120674005154674151Mouse
1302102Bis1_mbeta-carboline-induced seizures 1 (mouse)Not determined4119864433153864536Mouse
10043996Gct5_mgranulosa cell tumorigenesis 5 (mouse)Not determined4127784226156860686Mouse
26884445Sklq7_mskull length QTL 7, 10 week (mouse)468018237150884457Mouse
10043985Stheal12_msoft tissue heal 12 (mouse)Not determined4121342649155342753Mouse
1301982Pltiq1_mphospholipid transfer protein inducibility QTL 1 (mouse)Not determined4124621281156860686Mouse
26884437Sklq13_mskull length QTL 13, 16 week (mouse)457700000155684457Mouse
1300803Sluc6_msusceptibility to lung cancer 6 (mouse)Not determined4120674005154674151Mouse
4141549W10q10_mweight 10 weeks QTL 10 (mouse)Not determined88982069140468203Mouse
4142061Chlq16_mcirculating hormone level QTL 16 (mouse)Not determined4121342649155342753Mouse
1357895Ctrcts_mcataract severity (mouse)Not determined445709925138342753Mouse
1300933Cdcs9_mcytokine deficiency colitis susceptibility 9 (mouse)Not determined4125230872156860686Mouse
1300809Ccrs2_mcorpus callosum hemisphere surface size 2 (mouse)Not determined4107264957141265153Mouse
4141154Nba1_mNew Zealand Black autoimmunity 1 (mouse)Not determined131650724140879275Mouse
1301452Elsgp1_melevated serum gp70 1 (mouse)Not determined4121342649155342753Mouse
1301964Bw8q2_mbody weight at 8 weeks QTL 2 (mouse)Not determined4119864433153864536Mouse
10755520Rbc1_mred blood cell count 1 (mouse)4108477692142477692Mouse
10755521Hct1_mhematocrit 1 (mouse)4108477692142477692Mouse
10755522Hgb1_mhemoglobin 1 (mouse)4108477692142477692Mouse
1301108Scon2_msucrose consumption 2 (mouse)Not determined4134654451156860686Mouse
1300858Tafat_mtally ho associated mesenteric fat pad weight (mouse)Not determined4124621281156860686Mouse
10755531Lymph3_mlymphocyte differential 3 (mouse)4124553483156860686Mouse
15039382Ltgq7_mliver triglyceride QTL 7 (mouse)4105705794139705794Mouse
11533916Mts1_mmammary tumor susceptibility 1 (mouse)4125289325156860686Mouse
1300839Dyscalc2_mdystrophic cardiac calcinosis 2 (mouse)Not determined4111009051145009280Mouse
15039377Bw45_mbody weight QTL 45 (mouse)4105705794139705794Mouse
12880433Fgf23lq1_mFGF23 serum level QTL 1 (mouse)4101157197135157197Mouse
4141001Tgq17_mtriglyceride QTL 17 (mouse)Not determined112523489146523489Mouse
15039378Adip30_madiposity 30 (mouse)4105705794139705794Mouse
1357800Tgq3_mtriglyceride QTL 3 (mouse)Not determined4107055093141055180Mouse
15039385Mvlq3_mmacrovesicular liver lesion QTL 3 (mouse)4112182386146182386Mouse

Markers in Region
D5Mit392.1  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map7A3UniSTS
Cytogenetic Map18A1UniSTS
Cytogenetic Map1G3UniSTS
Cytogenetic Map9A3UniSTS
Cytogenetic Map7F1UniSTS
Cytogenetic Map5C1UniSTS
Cytogenetic Map4D2.2UniSTS
Cytogenetic Map16A3UniSTS
Cytogenetic Map11E2UniSTS
Cytogenetic Map16B2UniSTS
Cytogenetic Map6F1UniSTS
Cytogenetic Map4B1UniSTS
Cytogenetic Map17DUniSTS
Cytogenetic Map14C3UniSTS
Cytogenetic Map5C3.3UniSTS
Cytogenetic Map18A2UniSTS
Cytogenetic MapXF5UniSTS
Cytogenetic Map2G3UniSTS
Cytogenetic Map7A2UniSTS
Cytogenetic Map12A1.1UniSTS
Cytogenetic Map1H6UniSTS
Cytogenetic Map7D3UniSTS
Cytogenetic Map1G2UniSTS
Cytogenetic MapXF3UniSTS
Cytogenetic Map4D3UniSTS
Cytogenetic Map2F3UniSTS
Cytogenetic Map2A3UniSTS
Cytogenetic Map4D1UniSTS
Cytogenetic Map15A1UniSTS
Cytogenetic Map1A2UniSTS
Cytogenetic Map13A3.1UniSTS
Cytogenetic Map11B4UniSTS
Cytogenetic Map1D2.3UniSTS
Cytogenetic Map19C1UniSTS
Cytogenetic Map10D3UniSTS
Cytogenetic Map2H2UniSTS
Cytogenetic Map2E1UniSTS
cM Map528.0UniSTS
Whitehead Genetic518.6UniSTS


Expression

RNA-SEQ Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001168498 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001168500 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001243305 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001243306 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_145555 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_181047 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017320160 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030253469 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AK014757 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK039485 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK076488 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK138259 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK167453 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL627185 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BB093741 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC005730 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC037722 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC039748 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BY023152 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466552 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSMUST00000064481   ⟹   ENSMUSP00000070780
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl4135,096,888 - 135,112,983 (-)Ensembl
GRCm38.p6 Ensembl4135,369,577 - 135,385,672 (-)Ensembl
Ensembl Acc Id: ENSMUST00000105857   ⟹   ENSMUSP00000101483
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl4135,097,538 - 135,112,956 (-)Ensembl
GRCm38.p6 Ensembl4135,370,227 - 135,385,645 (-)Ensembl
Ensembl Acc Id: ENSMUST00000105858   ⟹   ENSMUSP00000101484
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl4135,096,887 - 135,112,966 (-)Ensembl
GRCm38.p6 Ensembl4135,369,576 - 135,385,655 (-)Ensembl
Ensembl Acc Id: ENSMUST00000105859   ⟹   ENSMUSP00000101485
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl4135,096,887 - 135,125,501 (-)Ensembl
GRCm38.p6 Ensembl4135,369,576 - 135,398,190 (-)Ensembl
Ensembl Acc Id: ENSMUST00000105860   ⟹   ENSMUSP00000101486
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl4135,096,887 - 135,125,532 (-)Ensembl
GRCm38.p6 Ensembl4135,369,576 - 135,398,221 (-)Ensembl
Ensembl Acc Id: ENSMUST00000123632   ⟹   ENSMUSP00000118237
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl4135,097,963 - 135,112,983 (-)Ensembl
GRCm38.p6 Ensembl4135,370,652 - 135,385,672 (-)Ensembl
Ensembl Acc Id: ENSMUST00000134717
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl4135,097,828 - 135,101,999 (-)Ensembl
GRCm38.p6 Ensembl4135,370,517 - 135,374,688 (-)Ensembl
Ensembl Acc Id: ENSMUST00000154518   ⟹   ENSMUSP00000116389
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl4135,099,248 - 135,125,538 (-)Ensembl
GRCm38.p6 Ensembl4135,371,937 - 135,398,227 (-)Ensembl
RefSeq Acc Id: NM_001168498   ⟹   NP_001161970
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm394135,096,888 - 135,112,983 (-)NCBI
GRCm384135,369,577 - 135,385,672 (-)NCBI
MGSCv374134,925,492 - 134,954,142 (-)RGD
Celera4133,570,079 - 133,598,716 (-)RGD
cM Map4 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_001168500   ⟹   NP_001161972
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm394135,096,888 - 135,125,538 (-)NCBI
GRCm384135,369,577 - 135,398,227 (-)NCBI
MGSCv374134,925,492 - 134,954,142 (-)RGD
Celera4133,570,079 - 133,598,716 (-)RGD
cM Map4 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_001243305   ⟹   NP_001230234
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm394135,096,888 - 135,112,983 (-)NCBI
GRCm384135,369,577 - 135,385,672 (-)NCBI
Celera4133,570,079 - 133,598,716 (-)ENTREZGENE
cM Map4 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_001243306   ⟹   NP_001230235
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm394135,096,888 - 135,125,538 (-)NCBI
GRCm384135,369,577 - 135,398,227 (-)NCBI
Celera4133,570,079 - 133,598,716 (-)ENTREZGENE
cM Map4 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_145555   ⟹   NP_663530
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm394135,096,888 - 135,125,538 (-)NCBI
GRCm384135,369,577 - 135,398,227 (-)NCBI
MGSCv374134,925,492 - 134,954,142 (-)RGD
Celera4133,570,079 - 133,598,716 (-)RGD
cM Map4 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_181047   ⟹   NP_851390
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm394135,096,888 - 135,112,983 (-)NCBI
GRCm384135,369,577 - 135,385,672 (-)NCBI
MGSCv374134,925,492 - 134,954,142 (-)RGD
Celera4133,570,079 - 133,598,716 (-)RGD
cM Map4 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_017320160   ⟹   XP_017175649
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm394135,096,887 - 135,125,551 (-)NCBI
GRCm384135,369,576 - 135,398,240 (-)NCBI
Sequence:
RefSeq Acc Id: XM_030253469   ⟹   XP_030109329
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm394135,096,887 - 135,104,967 (-)NCBI
GRCm384135,369,576 - 135,377,658 (-)NCBI
Sequence:
RefSeq Acc Id: NP_663530   ⟸   NM_145555
- Peptide Label: isoform 1
- UniProtKB: Q99JS0 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001161972   ⟸   NM_001168500
- Peptide Label: isoform 1
- UniProtKB: Q99JS0 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001161970   ⟸   NM_001168498
- Peptide Label: isoform 1
- UniProtKB: Q99JS0 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_851390   ⟸   NM_181047
- Peptide Label: isoform 1
- UniProtKB: Q99JS0 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001230235   ⟸   NM_001243306
- Peptide Label: isoform 2
- UniProtKB: A2A992 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001230234   ⟸   NM_001243305
- Peptide Label: isoform 1
- UniProtKB: Q99JS0 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_017175649   ⟸   XM_017320160
- Peptide Label: isoform X1
- UniProtKB: Q99JS0 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_030109329   ⟸   XM_030253469
- Peptide Label: isoform X1
- UniProtKB: Q99JS0 (UniProtKB/Swiss-Prot)
Ensembl Acc Id: ENSMUSP00000101483   ⟸   ENSMUST00000105857
Ensembl Acc Id: ENSMUSP00000101484   ⟸   ENSMUST00000105858
Ensembl Acc Id: ENSMUSP00000101485   ⟸   ENSMUST00000105859
Ensembl Acc Id: ENSMUSP00000101486   ⟸   ENSMUST00000105860
Ensembl Acc Id: ENSMUSP00000116389   ⟸   ENSMUST00000154518
Ensembl Acc Id: ENSMUSP00000070780   ⟸   ENSMUST00000064481
Ensembl Acc Id: ENSMUSP00000118237   ⟸   ENSMUST00000123632

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q99JS0-F1-model_v2 AlphaFold Q99JS0 1-100 view protein structure

Promoters
RGD ID:6885060
Promoter ID:EPDNEW_M5981
Type:multiple initiation site
Name:Ncmap_2
Description:Mus musculus noncompact myelin associated protein , transcriptvariant 1, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M5982  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm384135,385,653 - 135,385,713EPDNEW
RGD ID:6885062
Promoter ID:EPDNEW_M5982
Type:initiation region
Name:Ncmap_1
Description:Mus musculus noncompact myelin associated protein , transcriptvariant 1, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M5981  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm384135,398,216 - 135,398,276EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:2444888 AgrOrtholog
Ensembl Genes ENSMUSG00000043924 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000064481 ENTREZGENE
  ENSMUST00000064481.15 UniProtKB/Swiss-Prot
  ENSMUST00000105857 ENTREZGENE
  ENSMUST00000105857.8 UniProtKB/Swiss-Prot
  ENSMUST00000105858 ENTREZGENE
  ENSMUST00000105858.8 UniProtKB/Swiss-Prot
  ENSMUST00000105859 ENTREZGENE
  ENSMUST00000105859.8 UniProtKB/Swiss-Prot
  ENSMUST00000105860 ENTREZGENE
  ENSMUST00000105860.9 UniProtKB/TrEMBL
  ENSMUST00000123632.2 UniProtKB/TrEMBL
  ENSMUST00000154518.2 UniProtKB/TrEMBL
InterPro NCMAP UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:230822 UniProtKB/Swiss-Prot
MGD MGI:2444888 ENTREZGENE
NCBI Gene Ncmap ENTREZGENE
PANTHER NONCOMPACT MYELIN-ASSOCIATED PROTEIN UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PTHR35974 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Ncmap PhenoGen
UniProt A2A990_MOUSE UniProtKB/TrEMBL
  A2A991_MOUSE UniProtKB/TrEMBL
  A2A992 ENTREZGENE, UniProtKB/TrEMBL
  NCMAP_MOUSE UniProtKB/Swiss-Prot, ENTREZGENE


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2024-08-26 Ncmap  noncompact myelin associated protein  A330049M08Rik  RIKEN cDNA A330049M08 gene  Symbol and/or name updated 27372883 PROVISIONAL
2024-08-21 A330049M08Rik  RIKEN cDNA A330049M08 gene  Ncmap  noncompact myelin associated protein  Symbol and/or name change 5135510 APPROVED
2012-09-19 Ncmap  noncompact myelin associated protein  A330049M08Rik  RIKEN cDNA A330049M08 gene  Symbol and/or name change 5135510 APPROVED