Mgat4b (mannoside acetylglucosaminyltransferase 4, isoenzyme B) - Rat Genome Database

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Gene: Mgat4b (mannoside acetylglucosaminyltransferase 4, isoenzyme B) Mus musculus
Analyze
Symbol: Mgat4b
Name: mannoside acetylglucosaminyltransferase 4, isoenzyme B
RGD ID: 1617434
MGI Page MGI
Description: Enables acetylglucosaminyltransferase activity. Acts upstream of or within protein N-linked glycosylation. Predicted to be located in Golgi apparatus and membrane. Predicted to be active in Golgi stack; endoplasmic reticulum; and endoplasmic reticulum-Golgi intermediate compartment. Is expressed in several structures, including adrenal gland; nervous system; nose; respiratory system; and urinary system. Orthologous to human MGAT4B (alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase B).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: AA407995; alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase B; GlcNAc-T IVb; gnT-IVb; GnTIVb; mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isoenzyme B; N-acetylglucosaminyltransferase IVb; N-glycosyl-oligosaccharide-glycoprotein N-acetylglucosaminyltransferase IVb; UDP-N-acetylglucosamine: alpha-1,3-D-mannoside beta-1,4-N-acetylglucosaminyltransferase IVb
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391150,116,162 - 50,125,930 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1150,101,717 - 50,125,930 (+)EnsemblGRCm39 Ensembl
GRCm381150,225,335 - 50,235,103 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1150,210,890 - 50,235,103 (+)EnsemblGRCm38mm10GRCm38
MGSCv371150,038,837 - 50,048,605 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361150,069,056 - 50,078,073 (+)NCBIMGSCv36mm8
Celera1154,785,912 - 54,795,681 (+)NCBICelera
Cytogenetic Map11B1.3NCBI
cM Map1130.37NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Pathway Annotations     Click to see Annotation Detail View
Phenotype Annotations     Click to see Annotation Detail View
References

References - curated
# Reference Title Reference Citation
1. KEGG Annotation Import Pipeline Pipeline to import KEGG annotations from KEGG into RGD
2. Mouse MP Annotation Import Pipeline RGD automated import pipeline
3. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:10349636   PMID:10922068   PMID:11042159   PMID:11076861   PMID:11217851   PMID:12466851   PMID:12477932   PMID:14610273   PMID:14681479   PMID:15782199   PMID:16141072   PMID:16141073  
PMID:18799693   PMID:20015870   PMID:21267068   PMID:21873635   PMID:24619415   PMID:32325033  


Genomics

Comparative Map Data
Mgat4b
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391150,116,162 - 50,125,930 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1150,101,717 - 50,125,930 (+)EnsemblGRCm39 Ensembl
GRCm381150,225,335 - 50,235,103 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1150,210,890 - 50,235,103 (+)EnsemblGRCm38mm10GRCm38
MGSCv371150,038,837 - 50,048,605 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361150,069,056 - 50,078,073 (+)NCBIMGSCv36mm8
Celera1154,785,912 - 54,795,681 (+)NCBICelera
Cytogenetic Map11B1.3NCBI
cM Map1130.37NCBI
MGAT4B
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh385179,797,597 - 179,806,866 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl5179,797,597 - 179,806,952 (-)EnsemblGRCh38hg38GRCh38
GRCh375179,224,597 - 179,233,866 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 365179,156,711 - 179,166,547 (-)NCBINCBI36Build 36hg18NCBI36
Celera5174,849,754 - 174,859,109 (-)NCBICelera
Cytogenetic Map5q35.3NCBI
HuRef5173,950,773 - 173,959,800 (-)NCBIHuRef
CHM1_15178,657,002 - 178,666,353 (-)NCBICHM1_1
T2T-CHM13v2.05180,352,793 - 180,362,062 (-)NCBIT2T-CHM13v2.0
Mgat4b
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.21034,548,918 - 34,559,229 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1034,549,433 - 34,559,229 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1039,224,777 - 39,234,576 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0107,764,029 - 7,773,828 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01034,218,449 - 34,228,248 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01035,726,501 - 35,736,338 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1035,726,544 - 35,736,338 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01035,487,146 - 35,496,941 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41035,775,757 - 35,785,551 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera1033,898,684 - 33,908,479 (+)NCBICelera
Cytogenetic Map10q22NCBI
Mgat4b
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_004955408784,890 - 788,030 (+)EnsemblChiLan1.0
ChiLan1.0NW_004955408784,826 - 788,464 (+)NCBIChiLan1.0ChiLan1.0
MGAT4B
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan15172,880,158 - 172,889,443 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v05174,951,892 - 174,961,201 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.15182,262,103 - 182,266,745 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl5182,262,583 - 182,267,676 (-)Ensemblpanpan1.1panPan2
MGAT4B
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1111,883,440 - 1,892,949 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl111,882,976 - 1,913,145 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha112,006,767 - 2,016,345 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0111,857,841 - 1,867,419 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl111,857,910 - 1,867,097 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1111,829,438 - 1,839,016 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0111,908,604 - 1,918,183 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0112,148,828 - 2,158,407 (+)NCBIUU_Cfam_GSD_1.0
Mgat4b
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024407213119,754,693 - 119,764,652 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_004936739964,470 - 974,449 (+)EnsemblSpeTri2.0
SpeTri2.0NW_004936739964,476 - 974,429 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
MGAT4B
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl278,783,785 - 78,798,423 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1278,783,775 - 78,798,425 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2280,350,067 - 80,364,474 (+)NCBISscrofa10.2Sscrofa10.2susScr3
MGAT4B
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12381,527,419 - 81,536,715 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2381,526,533 - 81,536,708 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366607512,904,490 - 12,913,802 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Mgat4b
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462473342,673,710 - 42,681,073 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462473342,673,286 - 42,681,080 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Mgat4b
296 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:1264
Count of miRNA genes:541
Interacting mature miRNAs:664
Transcripts:ENSMUST00000041725, ENSMUST00000122977, ENSMUST00000133714, ENSMUST00000147468, ENSMUST00000151803
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
27226798Scvln18_msacral vertebrae length 2, 16 week (mouse)11325000060690826Mouse
26884446Sklq10_mskull length QTL 10, 10 week (mouse)11325000062890826Mouse
26884453Sklq16_mskull length QTL 16, 16 week (mouse)11325000072690826Mouse
13208559Wght10_mweight 10 (mouse)11395000088890826Mouse
13208558Lgth12_mbody length 12 (mouse)11395000094890826Mouse
1300905Scc6_mcolon tumor susceptibility 6 (mouse)Not determined11688027789019734Mouse
27226738Metcl11_mmetatarsal-calcaneal length 11, 10 week (mouse)11885000061390826Mouse
26884401Huml4_mhumerus length 4, 10 week (mouse)111155000068490826Mouse
27226762Feml21_mfemur length 21, 16 week (mouse)111175000065990826Mouse
1357640Orq2_movulation rate QTL 2 (mouse)Not determined111226863768500330Mouse
4141127W3q4_mweight 3 weeks QTL 4 (mouse)Not determined1226863768500330Mouse
4141470Egq4_mearly growth QTL 4 (mouse)Not determined1226863768500330Mouse
4142109W10q2_mweight 10 weeks QTL 2 (mouse)Not determined1226863768500330Mouse
4141582Lgaq1_mlate growth adjusted QTL 1 (mouse)Not determined1226863768500330Mouse
4142308W6q3_mweight 6 weeks QTL 3 (mouse)Not determined111226863768500330Mouse
4142216Lgq1_mlate growth QTL 1 (mouse)Not determined1226863768500330Mouse
4141966Tailq1_mtail length QTL 1 (mouse)Not determined1226863768500330Mouse
1357851Scfq3_msubcutaneous fat pad weight QTL 3 (mouse)Not determined111226863768500330Mouse
1357720Kidpq1_mkidney weight percentage QTL 1 (mouse)Not determined111226863768500330Mouse
1357437Epfq4_mepididymal fat pad weight QTL 4 (mouse)Not determined111226863768500330Mouse
1559002Lmrq4_mLeishmania major resistance QTL 4 (mouse)Not determined111226863769684947Mouse
39128214Lwq20_mliver weight QTL 20 (mouse)1112268637118022724Mouse
1558945Orgwq8_morgan weight QTL 8 (mouse)Not determined111705617567078411Mouse
10053687Eae6_msusceptibility to experimental allergic encephalomyelitis 6 (mouse)Not determined111778196668500330Mouse
12801459Leuf1_mleukocyte filtration 1 (mouse)111857861652578716Mouse
12801460Intim2_mintima modifier 2 (mouse)111857861652578716Mouse
12801457Intmrm2_mintima/media ratio modifier 2 (mouse)111857861652578716Mouse
1300938Bulb3_mbulb size 3 (mouse)Not determined111857861652578716Mouse
4141894Nidd6k_mNidd6 on KK-A (mouse)Not determined1912420496897826Mouse
1300579Thypr1_mthymocyte proliferative response 1 (mouse)Not determined111928257753282715Mouse
14746971Manh70_mmandible shape 70 (mouse)111990589053905890Mouse
4141398Tgq22_mtriglyceride QTL 22 (mouse)Not determined2116340655163406Mouse
10412246Dfs2_mdental fluorosis suseptibility 2 (mouse)Not determined112180736495881231Mouse
10044006Hbnr13_mHeligmosomoides bakeri nematode resistance 13 (mouse)Not determined112577262659772741Mouse
12910801Pwbwq14_mpost-weaning body weight QTL 14 (mouse)112719805750636094Mouse
12910804Pwbwq16_mpost-weaning body weight QTL 16 (mouse)112719805750636094Mouse
12910806Pwbwq15_mpost-weaning body weight QTL 15 (mouse)112719805750636094Mouse
12910817Pwgrq20_mpost-weaning growth rate QTL 20 (mouse)112719805750636094Mouse
12910818Ogrq5_moverall growth rate QTL 5 (mouse)112719805750636094Mouse
1357844Si5lq5_mserum IGFBP-5 level QTL 5 (mouse)Not determined112816587362165976Mouse
13524848Ppiq7_mprepulse inhibition QTL 7 (mouse)112856914762569147Mouse
1301426Desp2_mdespair 2 (mouse)Not determined112870858162708700Mouse
11522752Cocia18_mcocaine-induced activity, QTL 18 (mouse)113100820965008209Mouse
11059563Lmr31_mleishmaniasis resistance 31 (mouse)113210057766100694Mouse
1357782Char8_mP. chabaudi malaria resistance QTL 8 (mouse)Not determined113557861669684987Mouse
13208569Bmiq10_mbody mass index QTL 10 (mouse)113589082784890826Mouse
1301328Mol4_mmodifier of LPS-response 4 (mouse)Not determined113628257783481356Mouse
1301788Lbw8_mlupus NZB x NZW 8 (mouse)Not determined113650328770509492Mouse
1301896Tria1_mT-cell receptor induced activation 1 (mouse)Not determined113661356570613855Mouse
4141853Skmw17_mskeletal muscle weight 17 (mouse)Not determined113708094171081064Mouse
4142475Ity2a_mimmunity to S. typhimurium 2a (mouse)Not determined113776858060402716Mouse
10766457Nwa3_mNew Zealand White autoimmunity 3 (mouse)113801611572016209Mouse
10053675Eae44b_mexperimental allergic encephalomyelitis susceptibility 44b (mouse)Not determined113995072854094448Mouse
11532698Sluc36a_msusceptibility to lung cancer 36a (mouse)114225661776256730Mouse
11532699Sluc36b_msusceptibility to lung cancer 36b (mouse)114225661776256730Mouse
1300713Vmbic10_mventral midbrain iron content 10 (mouse)Not determined114277262654081064Mouse
4142300Ctrq3_mC. trachomatis resistance QTL 3 (mouse)Not determined114463003876854757Mouse
4141367Inf1_macute ozone induced inflammation (mouse)Not determined44630038113058009Mouse
1302021Nidd1n_mnon-insulin-dependent diabetes mellitus 1 in NSY (mouse)Not determined114516587379978324Mouse
1357878Mastr_mmodifier of astrocytoma (mouse)Not determined114570858189818733Mouse
1300765Bbaa4_mB.burgdorferi-associated arthritis 4 (mouse)Not determined114618516780185262Mouse
1301988Bmd11_mbone mineral density 11 (mouse)Not determined114631940780319522Mouse
13452402Hipmt3_mhippocampal morphometry trait 3 (mouse)114797732550277325Mouse
1301830Ssta4_msusceptibility to Salmonella typhimurium antigens 4 (mouse)Not determined115007819184078411Mouse

Markers in Region
RH124656  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381150,234,852 - 50,234,952UniSTSGRCm38
MGSCv371150,048,354 - 50,048,454UniSTSGRCm37
Celera1154,795,430 - 54,795,530UniSTS
Cytogenetic Map11B1.3UniSTS


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_145926 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AB053218 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AB053219 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK155336 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK177701 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK178703 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK181196 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK183411 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK183642 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK186986 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK190141 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK191887 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK192181 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK192721 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK195601 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK199018 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK199371 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK202109 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK202433 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK204039 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK204339 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK205336 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK205818 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK209484 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK210581 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK211071 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK213265 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK216064 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK217144 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL627187 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC031613 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BY729920 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466575 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CX205743 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CX206051 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  W66623 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSMUST00000041725   ⟹   ENSMUSP00000043346
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1150,116,162 - 50,125,930 (+)Ensembl
GRCm38.p6 Ensembl1150,225,335 - 50,235,103 (+)Ensembl
RefSeq Acc Id: ENSMUST00000122977
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1150,124,850 - 50,125,744 (+)Ensembl
GRCm38.p6 Ensembl1150,234,023 - 50,234,917 (+)Ensembl
RefSeq Acc Id: ENSMUST00000133714
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1150,121,575 - 50,122,594 (+)Ensembl
GRCm38.p6 Ensembl1150,230,748 - 50,231,767 (+)Ensembl
RefSeq Acc Id: ENSMUST00000147468   ⟹   ENSMUSP00000119786
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1150,101,717 - 50,121,926 (+)Ensembl
GRCm38.p6 Ensembl1150,210,890 - 50,231,099 (+)Ensembl
RefSeq Acc Id: ENSMUST00000151803   ⟹   ENSMUSP00000116802
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1150,121,567 - 50,125,930 (+)Ensembl
GRCm38.p6 Ensembl1150,230,740 - 50,235,103 (+)Ensembl
RefSeq Acc Id: NM_145926   ⟹   NP_666038
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391150,116,162 - 50,125,930 (+)NCBI
GRCm381150,225,335 - 50,235,103 (+)ENTREZGENE
MGSCv371150,038,837 - 50,048,605 (+)RGD
Celera1154,785,912 - 54,795,681 (+)RGD
cM Map11 ENTREZGENE
Sequence:
Reference Protein Sequences
RefSeq Acc Id: NP_666038   ⟸   NM_145926
- Peptide Label: precursor
- UniProtKB: Q812F9 (UniProtKB/Swiss-Prot),   Q3U2D9 (UniProtKB/Swiss-Prot),   Q8R0L4 (UniProtKB/Swiss-Prot),   Q812F8 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: ENSMUSP00000119786   ⟸   ENSMUST00000147468
RefSeq Acc Id: ENSMUSP00000116802   ⟸   ENSMUST00000151803
RefSeq Acc Id: ENSMUSP00000043346   ⟸   ENSMUST00000041725

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q812F8-F1-model_v2 AlphaFold Q812F8 1-548 view protein structure

Promoters
RGD ID:6821268
Promoter ID:MM_KWN:7231
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day0,   3T3L1_Day2,   3T3L1_Day3,   BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   Kidney,   Lung,   MEF_B4,   MEF_B6
Transcripts:NM_145926
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361150,038,176 - 50,038,972 (+)MPROMDB
RGD ID:8674500
Promoter ID:EPDNEW_M15281
Type:initiation region
Name:Mgat4b_1
Description:Mus musculus mannoside acetylglucosaminyltransferase 4, isoenzymeB , mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm381150,225,337 - 50,225,397EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:2143974 AgrOrtholog
Ensembl Genes ENSMUSG00000036620 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000041725 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUST00000147468.8 UniProtKB/TrEMBL
  ENSMUST00000151803.8 UniProtKB/TrEMBL
InterPro Glyco_transf_54 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:103534 UniProtKB/Swiss-Prot
MGD MGI:2143974 ENTREZGENE
NCBI Gene 103534 ENTREZGENE
PANTHER ALPHA-1,3-MANNOSYL-GLYCOPROTEIN 4-BETA-N-ACETYLGLUCOSAMINYLTRANSFERASE B UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PTHR12062 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam Glyco_transf_54 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Mgat4b PhenoGen
UniProt A8Y5H5_MOUSE UniProtKB/TrEMBL
  F7BME0_MOUSE UniProtKB/TrEMBL
  MGT4B_MOUSE UniProtKB/Swiss-Prot
  Q3U2D9 ENTREZGENE
  Q812F8 ENTREZGENE
  Q812F9 ENTREZGENE
  Q8R0L4 ENTREZGENE
UniProt Secondary Q3U2D9 UniProtKB/Swiss-Prot
  Q812F9 UniProtKB/Swiss-Prot
  Q8R0L4 UniProtKB/Swiss-Prot