Tsbp1 (testis expressed basic protein 1) - Rat Genome Database

Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Advanced Search (OLGA)
Gene: Tsbp1 (testis expressed basic protein 1) Mus musculus
Analyze
Symbol: Tsbp1
Name: testis expressed basic protein 1
RGD ID: 1617180
MGI Page MGI
Description: Is expressed in nervous system and sensory organ. Orthologous to human TSBP1 (testis expressed basic protein 1).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: hypothetical protein LOC407788; NG8; Tesb; Tesbp; testis specific basic protein; testis-expressed basic protein 1; TSBP; uncharacterized protein C6orf10 homolog
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391734,617,749 - 34,679,708 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1734,617,794 - 34,679,708 (+)EnsemblGRCm39 Ensembl
GRCm381734,398,767 - 34,460,734 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1734,398,820 - 34,460,734 (+)EnsemblGRCm38mm10GRCm38
MGSCv371734,535,765 - 34,597,679 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361734,024,335 - 34,068,780 (+)NCBIMGSCv36mm8
Celera1737,167,318 - 37,229,216 (+)NCBICelera
Cytogenetic Map17B1NCBI
cM Map1718.0NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
References

References - curated
# Reference Title Reference Citation
1. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
2. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:10349636   PMID:10803852   PMID:11042159   PMID:11076861   PMID:11217851   PMID:12466851   PMID:12477932   PMID:16141072   PMID:16141073   PMID:21267068   PMID:27357688   PMID:37196079  


Genomics

Comparative Map Data
Tsbp1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391734,617,749 - 34,679,708 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1734,617,794 - 34,679,708 (+)EnsemblGRCm39 Ensembl
GRCm381734,398,767 - 34,460,734 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1734,398,820 - 34,460,734 (+)EnsemblGRCm38mm10GRCm38
MGSCv371734,535,765 - 34,597,679 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361734,024,335 - 34,068,780 (+)NCBIMGSCv36mm8
Celera1737,167,318 - 37,229,216 (+)NCBICelera
Cytogenetic Map17B1NCBI
cM Map1718.0NCBI
TSBP1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38632,292,698 - 32,371,903 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl632,288,526 - 32,371,907 (-)EnsemblGRCh38hg38GRCh38
GRCh37632,260,475 - 32,339,680 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36632,368,453 - 32,447,634 (-)NCBINCBI36Build 36hg18NCBI36
Build 34632,368,469 - 32,447,634NCBI
Celera633,827,603 - 33,906,430 (-)NCBICelera
Cytogenetic Map6p21.32NCBI
HuRef632,014,824 - 32,093,640 (-)NCBIHuRef
CHM1_1632,262,950 - 32,342,143 (-)NCBICHM1_1
T2T-CHM13v2.0632,145,999 - 32,224,841 (-)NCBIT2T-CHM13v2.0
Tsbp1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8204,411,926 - 4,469,214 (-)NCBIGRCr8
mRatBN7.2204,410,002 - 4,467,284 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl204,410,004 - 4,457,053 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx205,170,226 - 5,219,942 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0204,531,964 - 4,581,678 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0205,005,225 - 5,052,249 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0204,178,655 - 4,235,947 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl204,178,686 - 4,235,950 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0206,258,025 - 6,315,303 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4204,532,358 - 4,579,409 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera206,012,617 - 6,059,663 (-)NCBICelera
Cytogenetic Map20p12NCBI
Tsbp1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0NW_004955437830,178 - 915,199 (-)NCBIChiLan1.0ChiLan1.0
TSBP1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2546,755,541 - 46,839,649 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1642,716,834 - 42,801,131 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0631,939,658 - 32,021,872 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1632,818,649 - 32,899,107 (-)NCBIpanpan1.1PanPan1.1panPan2
TSBP1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1121,749,856 - 1,920,630 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha121,881,267 - 2,066,496 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0122,084,816 - 2,194,622 (-)NCBIROS_Cfam_1.0
UMICH_Zoey_3.1121,736,871 - 1,926,564 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0121,806,337 - 2,006,128 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0121,872,898 - 2,072,882 (-)NCBIUU_Cfam_GSD_1.0
Tsbp1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494636,827,182 - 36,915,025 (-)NCBIHiC_Itri_2
TSBP1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1724,406,241 - 24,409,937 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2728,417,132 - 28,483,729 (+)NCBISscrofa10.2Sscrofa10.2susScr3
TSBP1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11739,680,157 - 39,743,399 (+)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_02366604432,186,563 - 32,259,174 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0

miRNA Target Status (No longer updated)

Predicted Target Of
Summary Value
Count of predictions:960
Count of miRNA genes:463
Interacting mature miRNAs:539
Transcripts:ENSMUST00000078615, ENSMUST00000097348, ENSMUST00000114175, ENSMUST00000131998, ENSMUST00000135217, ENSMUST00000139063, ENSMUST00000142208, ENSMUST00000142317, ENSMUST00000149121
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
10045977Tir9_mtrypanosome infection response 9 (mouse)Not determined172787811943885114Mouse
26884379Skwq5_mskull length QTL 5, 5 week (mouse)173311897454107028Mouse
1300890Bhr3_mbronchial hyperresponsiveness 3 (mouse)Not determined17397489048866091Mouse
11075105Modc1_mmodifier of Odc1 (mouse)172771579245622654Mouse
1300995Fembrs4_mfemur breaking strength 4 (mouse)Not determined171506165249061760Mouse
15039348Nmrs37_mNAFLD-associated magnetic resonance shift 37 (mouse)172781520961815209Mouse
4141357Mrdq1_mmodifier of retinal degeneration QTL 1 (mouse)Not determined3098790348039703Mouse
1302152Skull25_mskull morphology 25 (mouse)Not determined171681972150819843Mouse
1302028Asbb3_mautoimmune susceptibility in C57BL/6J and BALB/c 3 (mouse)Not determined171087811944878219Mouse
15039354Nmrs36_mNAFLD-associated magnetic resonance shift 36 (mouse)171914502553145025Mouse
4141215Mnic1_mmacronutrient intake, carbohydrate 1 (mouse)Not determined485475245670266Mouse
1300787Cd8mts5_mCD8 memory T cell subset 5 (mouse)Not determined17858491442585149Mouse
13524847Asrq8a_macoustic startle response 8a (mouse)171264696146646961Mouse
1300914Pcir4_mperiosteal circumference 4 (mouse)Not determined171506165249061760Mouse
13452396Leusq3_mleucocytosis susceptibility QTL 3 (mouse)171746220851462345Mouse
13452399Leusq6_mleucocytosis susceptibility QTL 6 (mouse)171746220851462345Mouse
1300535Char3_mP. chabaudi malaria resistance QTL 3 (mouse)Not determined171746220851462345Mouse
4140955Plgr1_mplague resistance locus 1 (mouse)Not determined3103350065033630Mouse
1302070Tbbmd7_mtotal body bone mineral density 7 (mouse)Not determined171506165249061760Mouse
10412214Sxbq3_mSGC/Knj cross B6 QTL 3 (mouse)Not determined171746220851462345Mouse
10412083Sm2_msusceptibility to Schistosoma mansoni infection 2 (mouse)Not determined171702994351030078Mouse
10412204Bbaa29_mB.burgdorferi-associated arthritis 29 (mouse)Not determined172605118560051352Mouse
10043949Pbft7_mpercent body fat 7 (mouse)Not determined17689393640893936Mouse
4141067Hbnr2_mHeligmosomoides bakeri nematode resistance 2 (mouse)Not determined1188597145886119Mouse
12904946Tammq8_mtibialis anterior muscle mass QTL 8 (mouse)171245178746451787Mouse
10412198Sst5_msusceptibility to tuberculosis 5 (mouse)Not determined172507658355712970Mouse
4142342Lfnq4_mlung function QTL 4 (mouse)Not determined1120648439364059Mouse
10412196Bbaa28_mB.burgdorferi-associated arthritis 28 (mouse)Not determined172558491443976235Mouse
1301935Skull24_mskull morphology 24 (mouse)Not determined17858491442585149Mouse
1302189Dps3_mdelta power in slow-wave sleep 3 (mouse)Not determined173381972136250180Mouse
1301331Lbw1_mlupus NZB x NZW 1 (mouse)Not determined171841835752420983Mouse
1301840Ssial4_msusceptibility to sialadenitiss 4 (mouse)Not determined171817541252178214Mouse
1300692Blmpf1_mbleomycin-induced pulmonary fibrosis 1 (mouse)Not determined173206165237644775Mouse
1357789Kdnw3_mkidney weight 3 (mouse)Not determined17485475247885665Mouse
1301338Lmr1_mleishmaniasis resistance 1 (mouse)Not determined171008134086996400Mouse
1300703Uvbi2_mUVB induced immunosuppression 2 (mouse)Not determined172862240662622654Mouse
11038694Pas19_mpulmonary adenoma susceptibility 19 (mouse)172971116434754437Mouse
1301056Pas2_mpulmonary adenoma susceptibility 2 (mouse)Not determined171842214152424327Mouse
1301454Eae5_msusceptibility to experimental allergic encephalomyelitis 5 (mouse)Not determined172461275058612864Mouse
14747010Mancz14_mmandible centroid size 14 (mouse)171199818445998184Mouse
1302005Loco2_mlocomotor activity 2 (mouse)Not determined172688497260885114Mouse
4141272Tfv1_mtotal food volume 1 (mouse)Not determined485475265637357Mouse
1300602Eye2_meye weight 2 (mouse)Not determined172650533741105037Mouse
25394538Skmw84_mskeletal muscle weight 84, TA (mouse)173266042635520036Mouse
10412276Leci2_mleukocyte endothelial cell interactions 2 (mouse)Not determined17334817537348299Mouse
1301759Sles1_msystemic lupus erythmatosus suppressor 1 (mouse)Not determined173421989035175937Mouse
1302140Wta4_mweight adult 4 (mouse)Not determined171681972150819843Mouse
1300706Alan1_malloantigen response 1 (mouse)Not determined17485475246469702Mouse
1558886Lgth9_mbody length 9 (mouse)Not determined171506165249061760Mouse
1558758Kcal2_mkilocalorie 2 (mouse)Not determined172640101252911704Mouse
4142150Stheal11_msoft tissue heal 11 (mouse)Not determined171228621183361768Mouse
11081168Tir7_mtrypanosome infection response 7 (mouse)171412337248123496Mouse
1300589Myaa2_mmodifier of Yaa 2 (mouse)Not determined173013255564132666Mouse

Markers in Region
35.MMHAP28FRD11.seq  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381734,409,850 - 34,410,014UniSTSGRCm38
MGSCv371734,546,795 - 34,546,959UniSTSGRCm37
Celera1737,178,335 - 37,178,499UniSTS
Cytogenetic Map17B1UniSTS
cM Map1718.0UniSTS
Whitehead_YAC17 UniSTS


Expression

RNA-SEQ Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001001177 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001163855 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006524547 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006524548 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006524549 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006524550 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006524551 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006524553 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006524554 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006524555 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006524556 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006524558 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006524559 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006524561 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006524562 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006524563 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006524564 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006524565 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006524566 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006524567 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006524568 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006524569 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006524574 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006524577 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011246526 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017317553 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017317555 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017317556 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017317557 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017317558 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017317559 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017317560 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017317561 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017317562 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017317563 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030249888 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030249889 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036160675 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036160676 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036160677 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_876520 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AF050157 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK077077 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK133031 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK139299 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC051142 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BY454825 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466660 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CR974457 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CT009767 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CU407311 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CU463834 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSMUST00000078615   ⟹   ENSMUSP00000077685
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1734,617,795 - 34,679,708 (+)Ensembl
GRCm38.p6 Ensembl1734,398,821 - 34,460,734 (+)Ensembl
Ensembl Acc Id: ENSMUST00000097348   ⟹   ENSMUSP00000094961
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1734,667,294 - 34,679,411 (+)Ensembl
GRCm38.p6 Ensembl1734,448,320 - 34,460,437 (+)Ensembl
Ensembl Acc Id: ENSMUST00000114175   ⟹   ENSMUSP00000109812
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1734,617,794 - 34,679,708 (+)Ensembl
GRCm38.p6 Ensembl1734,398,820 - 34,460,734 (+)Ensembl
Ensembl Acc Id: ENSMUST00000131998
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1734,637,009 - 34,655,081 (+)Ensembl
GRCm38.p6 Ensembl1734,418,035 - 34,436,107 (+)Ensembl
Ensembl Acc Id: ENSMUST00000135217   ⟹   ENSMUSP00000119513
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1734,637,031 - 34,640,886 (+)Ensembl
GRCm38.p6 Ensembl1734,418,057 - 34,421,912 (+)Ensembl
Ensembl Acc Id: ENSMUST00000139063   ⟹   ENSMUSP00000121839
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1734,617,795 - 34,664,472 (+)Ensembl
GRCm38.p6 Ensembl1734,398,821 - 34,445,498 (+)Ensembl
Ensembl Acc Id: ENSMUST00000142208
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1734,617,796 - 34,640,123 (+)Ensembl
GRCm38.p6 Ensembl1734,398,822 - 34,421,149 (+)Ensembl
Ensembl Acc Id: ENSMUST00000142317   ⟹   ENSMUSP00000117413
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1734,636,398 - 34,658,831 (+)Ensembl
GRCm38.p6 Ensembl1734,417,424 - 34,439,857 (+)Ensembl
Ensembl Acc Id: ENSMUST00000149121
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1734,617,795 - 34,637,013 (+)Ensembl
GRCm38.p6 Ensembl1734,398,821 - 34,418,039 (+)Ensembl
Ensembl Acc Id: ENSMUST00000223765   ⟹   ENSMUSP00000153186
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1734,640,827 - 34,678,973 (+)Ensembl
GRCm38.p6 Ensembl1734,421,853 - 34,459,999 (+)Ensembl
Ensembl Acc Id: ENSMUST00000223957   ⟹   ENSMUSP00000153432
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1734,640,844 - 34,667,791 (+)Ensembl
GRCm38.p6 Ensembl1734,421,870 - 34,448,817 (+)Ensembl
Ensembl Acc Id: ENSMUST00000235202
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1734,673,368 - 34,679,395 (+)Ensembl
GRCm38.p6 Ensembl1734,454,394 - 34,460,421 (+)Ensembl
Ensembl Acc Id: ENSMUST00000236732   ⟹   ENSMUSP00000158397
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1734,667,741 - 34,679,708 (+)Ensembl
GRCm38.p6 Ensembl1734,448,767 - 34,460,734 (+)Ensembl
RefSeq Acc Id: NM_001001177   ⟹   NP_001001177
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391734,617,794 - 34,679,708 (+)NCBI
GRCm381734,398,820 - 34,460,734 (+)NCBI
MGSCv371734,535,765 - 34,597,679 (+)RGD
Celera1737,167,318 - 37,229,216 (+)RGD
cM Map17 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_001163855   ⟹   NP_001157327
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391734,617,794 - 34,679,708 (+)NCBI
GRCm381734,398,820 - 34,460,734 (+)NCBI
MGSCv371734,535,765 - 34,597,679 (+)RGD
Celera1737,167,318 - 37,229,216 (+)RGD
cM Map17 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_006524547   ⟹   XP_006524610
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391734,617,754 - 34,679,708 (+)NCBI
GRCm381734,398,767 - 34,460,734 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006524548   ⟹   XP_006524611
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391734,617,754 - 34,679,708 (+)NCBI
GRCm381734,398,767 - 34,460,734 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006524549   ⟹   XP_006524612
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391734,617,754 - 34,679,708 (+)NCBI
GRCm381734,398,767 - 34,460,734 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006524550   ⟹   XP_006524613
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391734,617,753 - 34,679,708 (+)NCBI
GRCm381734,398,767 - 34,460,734 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006524551   ⟹   XP_006524614
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391734,617,753 - 34,679,708 (+)NCBI
GRCm381734,398,767 - 34,460,734 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006524553   ⟹   XP_006524616
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391734,617,753 - 34,679,708 (+)NCBI
GRCm381734,398,767 - 34,460,734 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006524554   ⟹   XP_006524617
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391734,617,753 - 34,679,708 (+)NCBI
GRCm381734,398,767 - 34,460,734 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006524555   ⟹   XP_006524618
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391734,617,753 - 34,679,708 (+)NCBI
GRCm381734,398,767 - 34,460,734 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006524556   ⟹   XP_006524619
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391734,617,753 - 34,679,708 (+)NCBI
GRCm381734,398,767 - 34,460,734 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006524558   ⟹   XP_006524621
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391734,617,753 - 34,679,708 (+)NCBI
GRCm381734,398,767 - 34,460,734 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006524559   ⟹   XP_006524622
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391734,617,754 - 34,679,708 (+)NCBI
GRCm381734,398,767 - 34,460,734 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006524561   ⟹   XP_006524624
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391734,617,754 - 34,679,708 (+)NCBI
GRCm381734,398,767 - 34,460,734 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006524562   ⟹   XP_006524625
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391734,617,754 - 34,679,708 (+)NCBI
GRCm381734,398,767 - 34,460,734 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006524563   ⟹   XP_006524626
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391734,617,754 - 34,679,708 (+)NCBI
GRCm381734,398,767 - 34,460,734 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006524564   ⟹   XP_006524627
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391734,617,753 - 34,679,708 (+)NCBI
GRCm381734,398,767 - 34,460,734 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006524565   ⟹   XP_006524628
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391734,617,754 - 34,679,708 (+)NCBI
GRCm381734,398,767 - 34,460,734 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006524566   ⟹   XP_006524629
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391734,617,754 - 34,679,708 (+)NCBI
GRCm381734,398,767 - 34,460,734 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006524567   ⟹   XP_006524630
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391734,617,753 - 34,679,708 (+)NCBI
GRCm381734,398,767 - 34,460,734 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006524568   ⟹   XP_006524631
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391734,617,754 - 34,679,708 (+)NCBI
GRCm381734,398,767 - 34,460,734 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006524569   ⟹   XP_006524632
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391734,617,753 - 34,679,708 (+)NCBI
GRCm381734,398,767 - 34,460,734 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006524574   ⟹   XP_006524637
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391734,617,755 - 34,679,708 (+)NCBI
GRCm381734,398,767 - 34,460,734 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006524577   ⟹   XP_006524640
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391734,664,479 - 34,679,708 (+)NCBI
GRCm381734,454,589 - 34,460,734 (+)NCBI
Sequence:
RefSeq Acc Id: XM_011246526   ⟹   XP_011244828
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391734,617,749 - 34,667,094 (+)NCBI
GRCm381734,398,767 - 34,448,120 (+)NCBI
Sequence:
RefSeq Acc Id: XM_017317553   ⟹   XP_017173042
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391734,617,753 - 34,679,708 (+)NCBI
GRCm381734,398,767 - 34,460,734 (+)NCBI
Sequence:
RefSeq Acc Id: XM_017317555   ⟹   XP_017173044
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391734,618,361 - 34,679,708 (+)NCBI
GRCm381734,399,387 - 34,460,734 (+)NCBI
Sequence:
RefSeq Acc Id: XM_017317556   ⟹   XP_017173045
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391734,617,752 - 34,679,708 (+)NCBI
GRCm381734,398,767 - 34,460,734 (+)NCBI
Sequence:
RefSeq Acc Id: XM_017317557   ⟹   XP_017173046
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391734,617,753 - 34,679,708 (+)NCBI
GRCm381734,398,767 - 34,460,734 (+)NCBI
Sequence:
RefSeq Acc Id: XM_017317558   ⟹   XP_017173047
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391734,617,753 - 34,679,708 (+)NCBI
GRCm381734,398,767 - 34,460,734 (+)NCBI
Sequence:
RefSeq Acc Id: XM_017317559   ⟹   XP_017173048
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391734,617,755 - 34,679,708 (+)NCBI
GRCm381734,398,767 - 34,460,734 (+)NCBI
Sequence:
RefSeq Acc Id: XM_017317560   ⟹   XP_017173049
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391734,617,755 - 34,679,708 (+)NCBI
GRCm381734,398,767 - 34,460,734 (+)NCBI
Sequence:
RefSeq Acc Id: XM_017317561   ⟹   XP_017173050
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391734,617,755 - 34,679,708 (+)NCBI
GRCm381734,398,767 - 34,460,734 (+)NCBI
Sequence:
RefSeq Acc Id: XM_017317562   ⟹   XP_017173051
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391734,617,755 - 34,679,708 (+)NCBI
GRCm381734,398,767 - 34,460,734 (+)NCBI
Sequence:
RefSeq Acc Id: XM_017317563   ⟹   XP_017173052
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391734,639,364 - 34,679,708 (+)NCBI
GRCm381734,420,390 - 34,460,734 (+)NCBI
Sequence:
RefSeq Acc Id: XM_030249888   ⟹   XP_030105748
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391734,618,363 - 34,679,708 (+)NCBI
GRCm381734,399,390 - 34,460,734 (+)NCBI
Sequence:
RefSeq Acc Id: XM_030249889   ⟹   XP_030105749
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391734,618,363 - 34,679,708 (+)NCBI
GRCm381734,399,389 - 34,460,734 (+)NCBI
Sequence:
RefSeq Acc Id: XM_036160675   ⟹   XP_036016568
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391734,617,753 - 34,679,708 (+)NCBI
Sequence:
RefSeq Acc Id: XM_036160676   ⟹   XP_036016569
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391734,617,753 - 34,679,708 (+)NCBI
Sequence:
RefSeq Acc Id: XM_036160677   ⟹   XP_036016570
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391734,617,754 - 34,679,708 (+)NCBI
Sequence:
RefSeq Acc Id: XR_876520
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391734,617,749 - 34,667,306 (+)NCBI
GRCm381734,398,767 - 34,448,332 (+)NCBI
Sequence:
Protein Sequences
Protein RefSeqs NP_001001177 (Get FASTA)   NCBI Sequence Viewer  
  NP_001157327 (Get FASTA)   NCBI Sequence Viewer  
  XP_006524610 (Get FASTA)   NCBI Sequence Viewer  
  XP_006524611 (Get FASTA)   NCBI Sequence Viewer  
  XP_006524612 (Get FASTA)   NCBI Sequence Viewer  
  XP_006524613 (Get FASTA)   NCBI Sequence Viewer  
  XP_006524614 (Get FASTA)   NCBI Sequence Viewer  
  XP_006524616 (Get FASTA)   NCBI Sequence Viewer  
  XP_006524617 (Get FASTA)   NCBI Sequence Viewer  
  XP_006524618 (Get FASTA)   NCBI Sequence Viewer  
  XP_006524619 (Get FASTA)   NCBI Sequence Viewer  
  XP_006524621 (Get FASTA)   NCBI Sequence Viewer  
  XP_006524622 (Get FASTA)   NCBI Sequence Viewer  
  XP_006524624 (Get FASTA)   NCBI Sequence Viewer  
  XP_006524625 (Get FASTA)   NCBI Sequence Viewer  
  XP_006524626 (Get FASTA)   NCBI Sequence Viewer  
  XP_006524627 (Get FASTA)   NCBI Sequence Viewer  
  XP_006524628 (Get FASTA)   NCBI Sequence Viewer  
  XP_006524629 (Get FASTA)   NCBI Sequence Viewer  
  XP_006524630 (Get FASTA)   NCBI Sequence Viewer  
  XP_006524631 (Get FASTA)   NCBI Sequence Viewer  
  XP_006524632 (Get FASTA)   NCBI Sequence Viewer  
  XP_006524637 (Get FASTA)   NCBI Sequence Viewer  
  XP_006524640 (Get FASTA)   NCBI Sequence Viewer  
  XP_011244828 (Get FASTA)   NCBI Sequence Viewer  
  XP_017173042 (Get FASTA)   NCBI Sequence Viewer  
  XP_017173044 (Get FASTA)   NCBI Sequence Viewer  
  XP_017173045 (Get FASTA)   NCBI Sequence Viewer  
  XP_017173046 (Get FASTA)   NCBI Sequence Viewer  
  XP_017173047 (Get FASTA)   NCBI Sequence Viewer  
  XP_017173048 (Get FASTA)   NCBI Sequence Viewer  
  XP_017173049 (Get FASTA)   NCBI Sequence Viewer  
  XP_017173050 (Get FASTA)   NCBI Sequence Viewer  
  XP_017173051 (Get FASTA)   NCBI Sequence Viewer  
  XP_017173052 (Get FASTA)   NCBI Sequence Viewer  
  XP_030105748 (Get FASTA)   NCBI Sequence Viewer  
  XP_030105749 (Get FASTA)   NCBI Sequence Viewer  
  XP_036016568 (Get FASTA)   NCBI Sequence Viewer  
  XP_036016569 (Get FASTA)   NCBI Sequence Viewer  
  XP_036016570 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAC05287 (Get FASTA)   NCBI Sequence Viewer  
  AAH51142 (Get FASTA)   NCBI Sequence Viewer  
  BAC36597 (Get FASTA)   NCBI Sequence Viewer  
  BAE21476 (Get FASTA)   NCBI Sequence Viewer  
  CAM18610 (Get FASTA)   NCBI Sequence Viewer  
  CAM18611 (Get FASTA)   NCBI Sequence Viewer  
  CAM18612 (Get FASTA)   NCBI Sequence Viewer  
  CAM18613 (Get FASTA)   NCBI Sequence Viewer  
  CAO77750 (Get FASTA)   NCBI Sequence Viewer  
  CAO77751 (Get FASTA)   NCBI Sequence Viewer  
  CAO77752 (Get FASTA)   NCBI Sequence Viewer  
  CAO77753 (Get FASTA)   NCBI Sequence Viewer  
  CAO77754 (Get FASTA)   NCBI Sequence Viewer  
  CAO77755 (Get FASTA)   NCBI Sequence Viewer  
  EDL10274 (Get FASTA)   NCBI Sequence Viewer  
  EDL10275 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSMUSP00000077685
  ENSMUSP00000077685.6
  ENSMUSP00000094961.4
  ENSMUSP00000109812
  ENSMUSP00000109812.2
  ENSMUSP00000117413.2
  ENSMUSP00000119513.2
  ENSMUSP00000121839.2
  ENSMUSP00000153186.2
  ENSMUSP00000153432.2
  ENSMUSP00000158397.2
RefSeq Acc Id: NP_001001177   ⟸   NM_001001177
- Peptide Label: isoform 1
- UniProtKB: A2CG24 (UniProtKB/TrEMBL),   Q8BHP1 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001157327   ⟸   NM_001163855
- Peptide Label: isoform 2
- UniProtKB: Q80XD0 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006524637   ⟸   XM_006524574
- Peptide Label: isoform X27
- UniProtKB: Q3V0M8 (UniProtKB/TrEMBL),   Q8BHP1 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006524610   ⟸   XM_006524547
- Peptide Label: isoform X2
- Sequence:
RefSeq Acc Id: XP_006524616   ⟸   XM_006524553
- Peptide Label: isoform X6
- UniProtKB: Q8BHP1 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006524611   ⟸   XM_006524548
- Peptide Label: isoform X2
- Sequence:
RefSeq Acc Id: XP_006524612   ⟸   XM_006524549
- Peptide Label: isoform X2
- Sequence:
RefSeq Acc Id: XP_006524614   ⟸   XM_006524551
- Peptide Label: isoform X4
- Sequence:
RefSeq Acc Id: XP_006524613   ⟸   XM_006524550
- Peptide Label: isoform X3
- Sequence:
RefSeq Acc Id: XP_006524617   ⟸   XM_006524554
- Peptide Label: isoform X7
- Sequence:
RefSeq Acc Id: XP_006524619   ⟸   XM_006524556
- Peptide Label: isoform X9
- UniProtKB: Q8BHP1 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006524621   ⟸   XM_006524558
- Peptide Label: isoform X12
- UniProtKB: Q8BHP1 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006524618   ⟸   XM_006524555
- Peptide Label: isoform X8
- UniProtKB: Q8BHP1 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006524622   ⟸   XM_006524559
- Peptide Label: isoform X13
- UniProtKB: Q8BHP1 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006524626   ⟸   XM_006524563
- Peptide Label: isoform X17
- UniProtKB: Q8BHP1 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006524624   ⟸   XM_006524561
- Peptide Label: isoform X15
- UniProtKB: Q8BHP1 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006524625   ⟸   XM_006524562
- Peptide Label: isoform X16
- UniProtKB: Q8BHP1 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006524628   ⟸   XM_006524565
- Peptide Label: isoform X19
- UniProtKB: Q8BHP1 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006524631   ⟸   XM_006524568
- Peptide Label: isoform X22
- UniProtKB: Q8BHP1 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006524629   ⟸   XM_006524566
- Peptide Label: isoform X20
- UniProtKB: Q8BHP1 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006524627   ⟸   XM_006524564
- Peptide Label: isoform X18
- UniProtKB: Q8BHP1 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006524630   ⟸   XM_006524567
- Peptide Label: isoform X21
- UniProtKB: Q8BHP1 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006524632   ⟸   XM_006524569
- Peptide Label: isoform X23
- UniProtKB: Q8BHP1 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006524640   ⟸   XM_006524577
- Peptide Label: isoform X30
- Sequence:
RefSeq Acc Id: XP_011244828   ⟸   XM_011246526
- Peptide Label: isoform X31
- Sequence:
RefSeq Acc Id: XP_017173042   ⟸   XM_017317553
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_017173045   ⟸   XM_017317556
- Peptide Label: isoform X5
- Sequence:
RefSeq Acc Id: XP_017173047   ⟸   XM_017317558
- Peptide Label: isoform X14
- UniProtKB: Q8BHP1 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_017173046   ⟸   XM_017317557
- Peptide Label: isoform X10
- UniProtKB: Q8BHP1 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_017173049   ⟸   XM_017317560
- Peptide Label: isoform X25
- Sequence:
RefSeq Acc Id: XP_017173048   ⟸   XM_017317559
- Peptide Label: isoform X24
- UniProtKB: Q8BHP1 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_017173051   ⟸   XM_017317562
- Peptide Label: isoform X28
- UniProtKB: Q8BHP1 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_017173050   ⟸   XM_017317561
- Peptide Label: isoform X26
- Sequence:
RefSeq Acc Id: XP_017173044   ⟸   XM_017317555
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_017173052   ⟸   XM_017317563
- Peptide Label: isoform X29
- Sequence:
RefSeq Acc Id: XP_030105749   ⟸   XM_030249889
- Peptide Label: isoform X2
RefSeq Acc Id: XP_030105748   ⟸   XM_030249888
- Peptide Label: isoform X2
Ensembl Acc Id: ENSMUSP00000153186   ⟸   ENSMUST00000223765
Ensembl Acc Id: ENSMUSP00000153432   ⟸   ENSMUST00000223957
Ensembl Acc Id: ENSMUSP00000121839   ⟸   ENSMUST00000139063
Ensembl Acc Id: ENSMUSP00000158397   ⟸   ENSMUST00000236732
Ensembl Acc Id: ENSMUSP00000119513   ⟸   ENSMUST00000135217
Ensembl Acc Id: ENSMUSP00000109812   ⟸   ENSMUST00000114175
Ensembl Acc Id: ENSMUSP00000077685   ⟸   ENSMUST00000078615
Ensembl Acc Id: ENSMUSP00000117413   ⟸   ENSMUST00000142317
Ensembl Acc Id: ENSMUSP00000094961   ⟸   ENSMUST00000097348
RefSeq Acc Id: XP_036016568   ⟸   XM_036160675
- Peptide Label: isoform X1
RefSeq Acc Id: XP_036016569   ⟸   XM_036160676
- Peptide Label: isoform X1
RefSeq Acc Id: XP_036016570   ⟸   XM_036160677
- Peptide Label: isoform X11
- UniProtKB: Q8BHP1 (UniProtKB/TrEMBL)

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-A2CG24-F1-model_v2 AlphaFold A2CG24 1-393 view protein structure

Promoters
RGD ID:13675696
Promoter ID:EPDNEW_M21997
Type:multiple initiation site
Name:BC051142_1
Description:Mus musculus cDNA sequence BC051142 , transcript variant 1, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M21998  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm381734,398,823 - 34,398,883EPDNEW
RGD ID:13675698
Promoter ID:EPDNEW_M21998
Type:initiation region
Name:BC051142_2
Description:Mus musculus cDNA sequence BC051142 , transcript variant 1, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M21997  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm381734,417,355 - 34,417,415EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:3039565 AgrOrtholog
Ensembl Genes ENSMUSG00000057246 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000078615 ENTREZGENE
  ENSMUST00000078615.12 UniProtKB/TrEMBL
  ENSMUST00000097348.10 UniProtKB/TrEMBL
  ENSMUST00000114175 ENTREZGENE
  ENSMUST00000114175.8 UniProtKB/TrEMBL
  ENSMUST00000135217.2 UniProtKB/TrEMBL
  ENSMUST00000139063.8 UniProtKB/TrEMBL
  ENSMUST00000142317.8 UniProtKB/TrEMBL
  ENSMUST00000223765.2 UniProtKB/TrEMBL
  ENSMUST00000223957.2 UniProtKB/TrEMBL
  ENSMUST00000236732.2 UniProtKB/TrEMBL
InterPro C6orf10 UniProtKB/TrEMBL
KEGG Report mmu:407788 UniProtKB/TrEMBL
MGD MGI:3039565 ENTREZGENE
NCBI Gene 407788 ENTREZGENE
PANTHER PTHR14368 UniProtKB/TrEMBL
  TESTIS-EXPRESSED BASIC PROTEIN 1 UniProtKB/TrEMBL
PhenoGen Tsbp1 PhenoGen
UniProt A0A286YCY6_MOUSE UniProtKB/TrEMBL
  A0A286YDZ4_MOUSE UniProtKB/TrEMBL
  A0A494BB69_MOUSE UniProtKB/TrEMBL
  A2CG24 ENTREZGENE, UniProtKB/TrEMBL
  A2CG25_MOUSE UniProtKB/TrEMBL
  A6X8K8_MOUSE UniProtKB/TrEMBL
  A6X8K9_MOUSE UniProtKB/TrEMBL
  F6ZQ53_MOUSE UniProtKB/TrEMBL
  Q3V0M8 ENTREZGENE, UniProtKB/TrEMBL
  Q80XD0 ENTREZGENE, UniProtKB/TrEMBL
  Q8BHP1 ENTREZGENE, UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2022-09-26 Tsbp1  testis expressed basic protein 1  BC051142  cDNA sequence BC051142  Symbol and/or name updated 27372883 PROVISIONAL
2016-03-09 BC051142  cDNA sequence BC051142  Tesb  testis specific basic protein  Data merged from RGD:1609617 737654 PROVISIONAL