Ccin (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCm39 | 4 | 43,983,504 - 43,985,533 (+) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 4 | 43,983,483 - 43,985,423 (+) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 4 | 43,983,504 - 43,985,533 (+) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 4 | 43,983,483 - 43,985,423 (+) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 4 | 43,996,376 - 43,998,405 (+) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 4 | 44,004,604 - 44,006,633 (+) | NCBI | | MGSCv36 | mm8 | | Celera | 4 | 44,004,720 - 44,006,749 (+) | NCBI | | Celera | | | Cytogenetic Map | 4 | B1 | NCBI | | | | | cM Map | 4 | 23.08 | NCBI | | | | |
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CCIN (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCh38 | 9 | 36,169,388 - 36,171,334 (+) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 9 | 36,169,388 - 36,171,334 (+) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 9 | 36,169,385 - 36,171,331 (+) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 9 | 36,159,391 - 36,161,320 (+) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Build 34 | 9 | 36,159,390 - 36,161,320 | NCBI | | | | | Celera | 9 | 36,102,976 - 36,104,918 (+) | NCBI | | Celera | | | Cytogenetic Map | 9 | p13.3 | NCBI | | | | | HuRef | 9 | 36,123,296 - 36,125,238 (+) | NCBI | | HuRef | | | CHM1_1 | 9 | 36,169,794 - 36,171,736 (+) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 9 | 36,191,394 - 36,193,340 (+) | NCBI | | T2T-CHM13v2.0 | | |
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Ccin (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
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GRCr8 | 5 | 63,002,427 - 63,004,314 (+) | NCBI | | GRCr8 | | | mRatBN7.2 | 5 | 58,206,676 - 58,208,563 (+) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 5 | 58,206,633 - 58,208,951 (+) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | 5 | 60,188,596 - 60,190,483 (+) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 5 | 62,007,409 - 62,009,296 (+) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 5 | 61,976,733 - 61,978,620 (+) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 5 | 59,452,348 - 59,454,235 (+) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 5 | 59,452,348 - 59,454,233 (+) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 5 | 63,974,871 - 63,976,758 (+) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 5 | 60,445,684 - 60,447,571 (+) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | RGSC_v3.1 | 5 | 60,445,862 - 60,447,748 (+) | NCBI | | | | | Celera | 5 | 56,785,152 - 56,787,039 (+) | NCBI | | Celera | | | Cytogenetic Map | 5 | q22 | NCBI | | | | |
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Ccin (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChiLan1.0 | NW_004958151 | 6 - 1,111 (+) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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CCIN (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
NHGRI_mPanPan1-v2 | 11 | 88,411,833 - 88,424,872 (-) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 9 | 88,417,770 - 88,430,809 (-) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 9 | 36,014,394 - 36,021,056 (+) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 9 | 36,815,577 - 36,822,204 (+) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 9 | 36,820,373 - 36,822,139 (+) | Ensembl | panpan1.1 | | panPan2 | |
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CCIN (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
CanFam3.1 | 11 | 52,637,580 - 52,640,121 (+) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 11 | 51,228,265 - 51,230,803 (+) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 11 | 53,743,935 - 53,746,473 (+) | NCBI | | ROS_Cfam_1.0 | | | UMICH_Zoey_3.1 | 11 | 52,246,797 - 52,249,335 (+) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 11 | 52,268,837 - 52,271,375 (+) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 11 | 52,970,389 - 52,972,927 (+) | NCBI | | UU_Cfam_GSD_1.0 | | |
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Ccin (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
HiC_Itri_2 | NW_024404947 | 167,595,289 - 167,597,603 (+) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936524 | 4,143,347 - 4,145,113 (+) | Ensembl | SpeTri2.0 | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936524 | 4,143,238 - 4,145,183 (+) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
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CCIN (Sus scrofa - pig) |
Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
Sscrofa11.1 Ensembl | 1 | 236,948,636 - 236,950,402 (+) | Ensembl | Sscrofa11.1 | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 1 | 236,947,871 - 236,950,447 (+) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 1 | 264,620,225 - 264,622,451 (-) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
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CCIN (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
ChlSab1.1 | 12 | 44,387,239 - 44,390,726 (-) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 12 | 44,387,995 - 44,389,761 (-) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666038 | 41,478,897 - 41,480,841 (-) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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Ccin (Heterocephalus glaber - naked mole-rat) |
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