Ttc24 (tetratricopeptide repeat domain 24)

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Gene: Ttc24 (tetratricopeptide repeat domain 24) Mus musculus

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Symbol:

Ttc24

Name:

tetratricopeptide repeat domain 24

RGD ID:

1616584

MGI Page

MGI

Description:

Orthologous to human TTC24 (tetratricopeptide repeat domain 24).

Type:

protein-coding (Ensembl: transcribed_unitary_pseudogene)

RefSeq Status:

PROVISIONAL

Previously known as:

A430025D11Rik; MGC58815; tetratricopeptide repeat protein 24; TPR repeat protein 24

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

GRCm39 - Mouse Genome Assembly GRCm39

Position:

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	3	87,976,717 - 87,985,611 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	3	87,976,717 - 87,985,611 (-)	Ensembl		GRCm39 Ensembl
GRCm39 Ensembl	3	87,977,334 - 87,982,824 (-)	Ensembl		GRCm39 Ensembl
GRCm38	3	88,069,410 - 88,078,304 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	3	88,069,410 - 88,078,304 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	3	87,873,332 - 87,882,226 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	3	88,155,337 - 88,164,231 (-)	NCBI		MGSCv36	mm8
Celera	3	88,108,991 - 88,117,903 (-)	NCBI		Celera
Cytogenetic Map	3	F1	NCBI
cM Map	3	38.78	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

Charcot-Marie-Tooth disease type 2 (ISO)

gastrointestinal stromal tumor (ISO)

immunodeficiency 42 (ISO)

MHC class II deficiency (ISO)

parathyroid carcinoma (ISO)

severe congenital neutropenia 3 (ISO)

severe congenital neutropenia 5 (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

4,4'-sulfonyldiphenol (EXP)

aflatoxin B1 (ISO)

Aflatoxin B2 alpha (ISO)

aristolochic acid A (ISO)

benzo[a]pyrene (ISO)

benzo[e]pyrene (ISO)

bisphenol A (ISO)

genistein (EXP)

methapyrilene (ISO)

rotenone (ISO)

thioacetamide (ISO)

triphenyl phosphate (ISO)

triptonide (EXP)

vitamin E (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

biological_process (ND)

Cellular Component

cellular_component (ND)

Molecular Function

molecular_function (ND)

References

References - curated

#	Reference Title	Reference Citation
1.	ClinVar Automated Import and Annotation Pipeline	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations

Additional References at PubMed

PMID:10349636	PMID:11042159	PMID:11076861	PMID:11217851	PMID:12466851	PMID:12477932	PMID:16141072	PMID:16141073

Genomics

Comparative Map Data

Ttc24
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	3	87,976,717 - 87,985,611 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	3	87,976,717 - 87,985,611 (-)	Ensembl		GRCm39 Ensembl
GRCm39 Ensembl	3	87,977,334 - 87,982,824 (-)	Ensembl		GRCm39 Ensembl
GRCm38	3	88,069,410 - 88,078,304 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	3	88,069,410 - 88,078,304 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	3	87,873,332 - 87,882,226 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	3	88,155,337 - 88,164,231 (-)	NCBI		MGSCv36	mm8
Celera	3	88,108,991 - 88,117,903 (-)	NCBI		Celera
Cytogenetic Map	3	F1	NCBI
cM Map	3	38.78	NCBI

TTC24
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	1	156,579,723 - 156,587,719 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	1	156,579,723 - 156,587,719 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	1	156,549,515 - 156,557,511 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	1	154,818,481 - 154,823,526 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Celera	1	129,620,311 - 129,627,354 (+)	NCBI		Celera
Cytogenetic Map	1	q22	NCBI
HuRef	1	127,907,248 - 127,914,290 (+)	NCBI		HuRef
CHM1_1	1	157,945,711 - 157,952,754 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	1	155,716,091 - 155,724,195 (+)	NCBI		T2T-CHM13v2.0

Ttc24
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	2	175,818,921 - 175,830,991 (-)	NCBI		GRCr8
mRatBN7.2	2	173,525,204 - 173,533,182 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	2	173,524,600 - 173,533,107 (-)	Ensembl		mRatBN7.2 Ensembl
Rnor_6.0	2	187,426,432 - 187,438,482 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	2	187,430,767 - 187,435,323 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	2	206,833,574 - 206,841,478 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	2	180,138,735 - 180,143,501 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
Celera	2	167,468,325 - 167,480,376 (-)	NCBI		Celera
Cytogenetic Map	2	q34	NCBI

Ttc24
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0	NW_004955545	2,670,629 - 2,679,093 (+)	NCBI	ChiLan1.0	ChiLan1.0

TTC24
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	1	93,256,094 - 93,263,081 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	1	92,990,621 - 92,997,566 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	1	131,925,121 - 131,931,589 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	1	135,748,836 - 135,754,007 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	1	135,747,196 - 135,754,227 (+)	Ensembl	panpan1.1		panPan2

TTC24
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	7	41,372,960 - 41,381,514 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
Dog10K_Boxer_Tasha	7	40,860,605 - 40,869,172 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	7	41,236,459 - 41,245,096 (-)	NCBI		ROS_Cfam_1.0
UMICH_Zoey_3.1	7	41,018,101 - 41,026,655 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	7	41,071,346 - 41,079,901 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	7	41,355,024 - 41,363,582 (-)	NCBI		UU_Cfam_GSD_1.0

Ttc24
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405058	26,728,410 - 26,735,988 (+)	NCBI		HiC_Itri_2
SpeTri2.0	NW_004936580	5,758,792 - 5,766,327 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

TTC24
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	4	93,500,564 - 93,510,815 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	4	93,500,900 - 93,512,039 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	4	102,275,794 - 102,284,140 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

TTC24
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	20	7,275,898 - 7,289,531 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	20	7,275,064 - 7,281,253 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666038	6,572,293 - 6,579,465 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Ttc24
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla 1.0	NW_004624885	1,768,702 - 1,777,349 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in Ttc24
271 total Variants

miRNA Target Status

Predicted Target Of

	Summary Value
Count of predictions:	311
Count of miRNA genes:	202
Interacting mature miRNAs:	222
Transcripts:	ENSMUST00000050258, ENSMUST00000064550
Prediction methods:	Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCm39)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
4142399	Aec1_m	autoimmune exocrinopathy 1 (mouse)			Not determined			7586174	102690034	Mouse
26884378	Skwq6_m	skull length QTL 6, 10 week (mouse)					3	51907421	102307316	Mouse
1301971	Cia5_m	collagen induced arthritis QTL 5 (mouse)			Not determined		3	66046658	100046795	Mouse
1301392	Eae3_m	susceptibility to experimental allergic encephalomyelitis 3 (mouse)			Not determined		3	79548730	113548837	Mouse
1301904	Iba2_m	induction of brown adipocytes 2 (mouse)			Not determined		3	82147043	116147184	Mouse
26884382	Bzwq1_m	bi-zygomatic width QTL 1, 5 week (mouse)					3	52207421	137205761	Mouse
11041900	Lmr11a_m	leishmaniasis resistance 11a (mouse)					3	83463991	117464137	Mouse
26884380	Skwq1_m	skull length QTL 1, 5 week (mouse)					3	43954435	101607316	Mouse
14746984	Manh54_m	mandible shape 54 (mouse)					3	85289152	119289152	Mouse
12738440	Twq3_m	testis weight QTL 3 (mouse)					3	87228015	121228015	Mouse
25314313	Syncl1_m	synaptonemal complex length 1 (mouse)					3	67907333	128393649	Mouse
1301272	Cfsw1_m	cystic fibrosis survival to weaning 1 (mouse)			Not determined		3	83882912	117883044	Mouse
1301791	Char4_m	P. chabaudi malaria resistance QTL 4 (mouse)			Not determined		3	69625509	100655290	Mouse
11049572	Lmr11c_m	leishmaniasis resistance 11c (mouse)					3	72139967	106140094	Mouse
26884436	Zlq3_m	zygomatic length QTL 3, 10 week (mouse)					3	3265060	142405761	Mouse
26884427	Cvht4_m	cranial vault height 4, 10 week (mouse)					3	16054164	109707316	Mouse
4141294	Bmd24_m	bone mineral density 24 (mouse)			Not determined		3	61740061	95740241	Mouse
10043981	Cia5a_m	collagen induced arthritis QTL 5a (mouse)			Not determined		3	87170454	89140094	Mouse
1301705	Sles3_m	systemic lupus erythmatosus suppressor 3 (mouse)			Not determined		3	37174862	143353183	Mouse
13207570	Tcq12_m	total cholesterol QTL 12 (mouse)					3	16504164	130163649	Mouse
1357583	Sle18_m	systematic lupus erythematosus susceptibility 18 (mouse)			Not determined		3	87208904	125316236	Mouse
26884422	Cvht7_m	cranial vault height 7, 16 week (mouse)					3	28954149	118893649	Mouse
1300595	Tmevd2_m	Theiler's murine encephalomyelitis virus induced demyelinating disease susceptibility 2 (mouse)			Not determined		3	75463302	109463549	Mouse
11251721	Ewc3_m	ethanol withdrawal and consumption 3 (mouse)					3	69568554	103568554	Mouse
1300982	Lmr11_m	leishmaniasis resistance 11 (mouse)			Not determined		3	72139967	106140094	Mouse
12880419	V125Dq4_m	vitamin D active form serum level QTL 4 (mouse)					3	58907307	92907307	Mouse
1301947	Pcfm3_m	periosteal circumference and femur length 3 (mouse)			Not determined		3	81084652	115084797	Mouse
4142099	Cq3_m	cholesterol QTL 3 (mouse)			Not determined		3	84888918	118889067	Mouse
11039512	Ltpr3b_m	Leishmania tropica response 3b (mouse)					3	83463991	117464137	Mouse
11039519	Ltpr3_m	Leishmania tropica response 3 (mouse)					3	56704102	100464137	Mouse
1302056	Orgwq4_m	organ weight QTL 4 (mouse)			Not determined		3	30067588	147304689	Mouse
11039507	Ltpr3g_m	Leishmania tropica response 3g (mouse)					3	83463991	117464137	Mouse
11039508	Ltpr3f_m	Leishmania tropica response 3f (mouse)					3	83463991	117464137	Mouse
1301422	Sle11_m	systematic lupus erythematosus susceptibility 11 (mouse)			Not determined		3	70208904	104209042	Mouse
11039509	Ltpr3e_m	Leishmania tropica response 3e (mouse)					3	83463991	117464137	Mouse
11039510	Ltpr3d_m	Leishmania tropica response 3d (mouse)					3	83463991	117464137	Mouse
13208566	Bmiq5_m	body mass index QTL 5 (mouse)					3	40954435	115793649	Mouse
11039511	Ltpr3c_m	Leishmania tropica response 3c (mouse)					3	83463991	117464137	Mouse

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_172526	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AC137525	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK039884	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK076743	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC055114	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC147554	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC147555	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH466547	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSMUST00000050258 ⟹ ENSMUSP00000061571

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	3	87,976,717 - 87,985,611 (-)	Ensembl
GRCm38.p6 Ensembl	3	88,069,410 - 88,078,304 (-)	Ensembl

Ensembl Acc Id:

ENSMUST00000064550

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	3	87,977,120 - 87,979,367 (-)	Ensembl
GRCm38.p6 Ensembl	3	88,069,813 - 88,072,060 (-)	Ensembl

Ensembl Acc Id:

ENSMUST00000238487

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	3	87,976,717 - 87,985,611 (-)	Ensembl
GRCm38.p6 Ensembl	3	88,069,410 - 88,078,304 (-)	Ensembl

Ensembl Acc Id:

ENSMUST00000238508

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	3	87,977,334 - 87,982,824 (-)	Ensembl
GRCm38.p6 Ensembl	3	88,070,027 - 88,075,517 (-)	Ensembl

RefSeq Acc Id:

NM_172526 ⟹ NP_766114

RefSeq Status:

PROVISIONAL

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	3	87,976,717 - 87,985,611 (-)	NCBI
GRCm38	3	88,069,410 - 88,078,304 (-)	NCBI
MGSCv37	3	87,873,332 - 87,882,226 (-)	RGD
Celera	3	88,108,991 - 88,117,903 (-)	RGD
cM Map	3		ENTREZGENE

Sequence:

show sequence

AGAAGGCCACTGTGGAGAAAACAGGACAGACAGAGGATAGCCACTGGAAGCTTGAGACTGTGCC
AAAACCCTCAAACTGCAGGAAGAAAAAGGAGAAAAAGAAGAGGCTGCAAGAAGAAGCCAAGATC
CGGAGCCTCACCAGGGATGGCCACAGGGCCTTGCATGCTGCTCAGATTCAGGAGGCCTTGGGCA
GCTTCCAGAAGGCCTTCCTGCTGGCCTCCAAGGCCCCATCAACCAGAGACAGCTCCATTCTTCA
AGCCTGTGCCTTTAACTTAGGGGCTGCCTATGTGGAGACTGGAGACCCAGCCACAGGTCTTGAG
CTACTTCTGAGAGCCCACCCTGAAGAGAAGTCCGAAGGCTGGTGTCATGGTGACCAGTGCTTCA
ATGTGGCTTTAGCCCATCACGCCCTTGGTGACCTGACTCAAGCTTTGGACTGGTACCACAGGGC
TCTGGTCCATTACCAACCACAGGGCTACCATGGGGAGGCACAGGCAAAAATAGGAGCCTGCTAT
CAGGCCCTGGGATGGCCTAAGCAAGCAGCCTGCAGTTTACAGGAAGCAAGCCAGGCCTATGCCC
ATGCAGGCCAGCTCTGGGATGCAGCCTTGGCTCAGGTGGCTGCCGTGAGATGTATGCTGAGCAG
TCGGCAGTATGGACTGAGTGATGTGCTGCGGGCTCTGGAGGAGAGCCGCAAGCTTGCTGATGCT
GACCGGAGCACCGACCAGGGACTGCTAGGGCCATTCTACAATGATCTAGGCATGGGTTACTTCC
AACTCCAACTGTTCCCTCTGGCAGTAGAGGCCTTCCTGCAGGCCCTACCCCTGTGTCGACAGCC
ATCAGAGCAGGCTACAGTGCTTCAAAATCTTGGAATGACCCACAATGTCCTTGGCAACTATTGG
GAAGCCCAGGAGTTTCACCAGAAGGCTGCAAGTCTGCATGGCTCTGTGGGCCAGCGGTGGGAGC
AGGGTCGCAGCTTTAGCGGCCTGGCATTTTCACTGAGCCAGCTGGGGGACCACAGGGCTGCCTG
GGACAGCTATTTGCATGCCCTCCAGGCTGCCCAAGACACTGGAGACGTGAAGGGACAGTGGCAG
GCGTGTGAGGGCCTTGGGGCAGCTGCAGCCAGACTGGGACAACATGACCAGGCCTTGAAATACT
ATAAGGAAGCGCTGGCCCTGTGTCAGCACGAACCAAGTTCTGTACGAGAGCGGCTTGTGGCCAA
ATTGGCAGATGCCATGCGGACCTTCGTGGCTCAGGAGAAGATAGCCCAGGCTCGTTTCTTGCCC
TCTGCTCCTGGAAAGCTGCAGACTTCACGGAAGGCAAAGACCTCAGCCAGGGTACAAAGTAGTG
CAGAAGATGCCCAGGAGAGTCAGTGGGAAGGTGAAGCGTCAGAAGGCGGCCATGAGAAGAAGGA
GATGGAGGGGTTGGTGAACACGGCCACTGTGTTAGGACCTCAGAGACAGAACCGAGCCACAACC
CATCTTCCATCTGGAGGCCCAAGTCCCAGTGGAGAGGAATATCCCTTCATCATAGCACCCAAGA
AGCTCCGAGTCAGTAGGTCATCCACATGGGCCAAGGAAGCCCTCGGCAGGAACTTCCAGAGGAC
ACGCATCCAGTCCGGCCTCTGCAGCATCATGTGATCTATACCTGCTGGCTACAGCACTTACCTC
TACAGGAACTTCCCGATAGACACTTGTATGGGCTTTGGGGAGGAGCCTCTTTAGCCGGTATGGA
CAAGGTGCTCCTGAACAGACAGGCCAAGGACTCTGCTGGCTTGGCATTGAGAGTCTCTTTGCTC
TTCTTTGGGGGGGACTTGAACTCAGTAGACAAACGAAAACTGGGAAACGAATAGTGAGCACTGT
CCCTTGCTTTTCTGGATTGGGACGTCATGACTGTTAAAACGTTTTGCCAGTTCTAAAAATGACT
TCCTAGCTCAGGTGACTTTGGGGTCACTGAGCTTCTCCATGTCCCCTTCTCATGTTGGAGACAC
GAATGTCATACAACAGAAGATAAGAGGGCACACACTCCAGTTACTGTCCCCCATGAATACCCAA
AGTCACACAATAACCGTGATAATTTTTCGACATTTTTCGAGCATGCTTCACACCCTGAACACTT
ATAGGTATTTCCTCACAGGAGTGCGGGAGGAAAAGAGATGGCTGGGCACAGTGACACGGGCCTA
TGATCCTAAAGCTCAGAGAGGGCAGGAAGGTCACCGCTTCAAGGCCAGTCTGAGCTACATAGCA
AGATGTATCTC

hide sequence

Protein Sequences


Protein RefSeqs	NP_766114	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAH55114	(Get FASTA)	NCBI Sequence Viewer
	AAI47555	(Get FASTA)	NCBI Sequence Viewer
	AAI47556	(Get FASTA)	NCBI Sequence Viewer
	BAC30472	(Get FASTA)	NCBI Sequence Viewer
	EDL15316	(Get FASTA)	NCBI Sequence Viewer
	Q8BYG0	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:

NP_766114 ⟸ NM_172526

- UniProtKB:

Q7TPM2 (UniProtKB/Swiss-Prot), Q8BYG0 (UniProtKB/Swiss-Prot), B9EJT8 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MLSSRQYGLSDVLRALEESRKLADADRSTDQGLLGPFYNDLGMGYFQLQLFPLAVEAFLQALPL
CRQPSEQATVLQNLGMTHNVLGNYWEAQEFHQKAASLHGSVGQRWEQGRSFSGLAFSLSQLGDH
RAAWDSYLHALQAAQDTGDVKGQWQACEGLGAAAARLGQHDQALKYYKEALALCQHEPSSVRER
LVAKLADAMRTFVAQEKIAQARFLPSAPGKLQTSRKAKTSARVQSSAEDAQESQWEGEASEGGH
EKKEMEGLVNTATVLGPQRQNRATTHLPSGGPSPSGEEYPFIIAPKKLRVSRSSTWAKEALGRN
FQRTRIQSGLCSIM

hide sequence

Ensembl Acc Id:

ENSMUSP00000061571 ⟸ ENSMUST00000050258

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-Q8BYG0-F1-model_v2	AlphaFold	Q8BYG0	1-334	view protein structure

Promoters

RGD ID:

6881092

Promoter ID:

EPDNEW_M3997

Type:

initiation region

Name:

Ttc24_1

Description:

Mus musculus tetratricopeptide repeat domain 24 , mRNA.

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm38	3	88,072,052 - 88,072,112	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	MGI:2443841	AgrOrtholog
Ensembl Genes	ENSMUSG00000051036	Ensembl
	ENSMUSG00000121872	Ensembl, ENTREZGENE
Ensembl Transcript	ENSMUST00000238487	ENTREZGENE
Gene3D-CATH	1.25.40.10	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro	TPR-like_helical_dom_sf	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	TPR_2	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	TPR_24	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	TPR_repeat	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report	mmu:214191	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
MGD	MGI:2443841	ENTREZGENE
NCBI Gene	214191	ENTREZGENE
PANTHER	PTHR47050	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	TETRATRICOPEPTIDE REPEAT PROTEIN 24	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam	TPR_2	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen	Ttc24	PhenoGen
PROSITE	TPR	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	TPR_REGION	UniProtKB/Swiss-Prot
SMART	TPR	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP	SSF48452	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt	B9EJT8	ENTREZGENE, UniProtKB/TrEMBL
	Q7TPM2	ENTREZGENE
	Q8BYG0	ENTREZGENE, UniProtKB/Swiss-Prot
UniProt Secondary	Q7TPM2	UniProtKB/Swiss-Prot

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - ClinVar