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Gene: Plet1 (placenta expressed transcript 1) Mus musculus

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Symbol:

Plet1

Name:

placenta expressed transcript 1

RGD ID:

1615026

MGI Page

MGI

Description:

Involved in negative regulation of cell-matrix adhesion; positive regulation of cell migration; and wound healing, spreading of epidermal cells. Located in apical plasma membrane and external side of plasma membrane. Is expressed in several structures, including branchial arch; extraembryonic component; genitourinary system; gut; and hemolymphoid system gland. Orthologous to human PLET1 (placenta expressed transcript 1).

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

0610037B23Rik; 1600029D21Rik; AA407923; antigen mAgK114; AU043048; placenta-expressed transcript 1 protein; PLE

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

GRCm39 - Mouse Genome Assembly GRCm39

Position:

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	9	50,405,825 - 50,416,939 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	9	50,405,825 - 50,416,782 (+)	Ensembl		GRCm39 Ensembl
GRCm38	9	50,494,525 - 50,505,639 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	9	50,494,525 - 50,505,482 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	9	50,302,630 - 50,313,744 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	9	50,246,755 - 50,257,363 (+)	NCBI		MGSCv36	mm8
Celera	9	47,784,391 - 47,795,440 (+)	NCBI		Celera
Cytogenetic Map	9	A5.3	NCBI
cM Map	9	27.71	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

chromosome 11 partial duplication syndrome (ISO)

intellectual disability (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

(1->4)-beta-D-glucan (EXP)

1,1-dichloroethene (EXP)

1,2-dimethylhydrazine (EXP)

17beta-estradiol (ISO)

2,2',4,4'-Tetrabromodiphenyl ether (EXP)

2,3,7,8-tetrachlorodibenzodioxine (ISO)

2,4-dibromophenyl 2,4,5-tribromophenyl ether (EXP)

4,4'-sulfonyldiphenol (EXP)

4-hydroxyphenyl retinamide (EXP)

benzo[a]pyrene (EXP,ISO)

bisphenol A (EXP,ISO)

bisphenol F (EXP)

cadmium atom (ISO)

cadmium dichloride (ISO)

copper atom (ISO)

copper(0) (ISO)

dibenzo[a,l]pyrene (EXP)

dimethylarsinic acid (EXP)

endosulfan (ISO)

folic acid (EXP)

fulvestrant (ISO)

inulin (EXP)

methylarsonic acid (EXP)

nitrofen (ISO)

ozone (EXP)

paracetamol (ISO)

paraquat (ISO)

perfluorooctane-1-sulfonic acid (EXP)

sodium arsenate (EXP)

sodium arsenite (EXP)

testosterone (ISO)

tetrachloromethane (ISO)

thioacetamide (ISO)

titanium dioxide (EXP)

trichloroethene (ISO)

triptonide (EXP)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

cell differentiation (IEA)

negative regulation of cell-matrix adhesion (IBA,IMP)

positive regulation of cell migration (IBA,IMP)

wound healing, spreading of epidermal cells (IBA,IMP)

Cellular Component

apical plasma membrane (IBA,IDA)

external side of plasma membrane (IBA,IDA)

Phenotype Annotations Click to see Annotation Detail View

Mammalian Phenotype

abnormal dendritic cell migration (IAGP)

abnormal dendritic cell number (IAGP)

abnormal intestine physiology (IAGP)

abnormal small intestinal villus morphology (IAGP)

abnormal tumor susceptibility (IAGP)

decreased circulating sodium level (IEA)

impaired wound healing (IAGP)

increased circulating insulin level (IEA)

increased dendritic cell number (IAGP)

References

References - curated

#	Reference Title	Reference Citation
1.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

Additional References at PubMed

PMID:10349636	PMID:10725249	PMID:10922068	PMID:11042159	PMID:11076861	PMID:11217851	PMID:12466851	PMID:12477932	PMID:15203209	PMID:15339983	PMID:16141072	PMID:16141073
PMID:16602821	PMID:17302988	PMID:17576135	PMID:18195351	PMID:18287559	PMID:20130590	PMID:20223988	PMID:21873635	PMID:22008794	PMID:22072979	PMID:23954751	PMID:24198274
PMID:25053428	PMID:27121762	PMID:27914912	PMID:29070673	PMID:29867988	PMID:30537036	PMID:30973865	PMID:32467237	PMID:32467240	PMID:33473114	PMID:34254201	PMID:35273595
PMID:38167746	PMID:38355793	PMID:38760574

Genomics

Comparative Map Data

Plet1
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	9	50,405,825 - 50,416,939 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	9	50,405,825 - 50,416,782 (+)	Ensembl		GRCm39 Ensembl
GRCm38	9	50,494,525 - 50,505,639 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	9	50,494,525 - 50,505,482 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	9	50,302,630 - 50,313,744 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	9	50,246,755 - 50,257,363 (+)	NCBI		MGSCv36	mm8
Celera	9	47,784,391 - 47,795,440 (+)	NCBI		Celera
Cytogenetic Map	9	A5.3	NCBI
cM Map	9	27.71	NCBI

PLET1
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	11	112,248,153 - 112,260,860 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	11	112,248,153 - 112,260,860 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	11	112,118,876 - 112,131,583 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	11	111,624,732 - 111,636,793 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Celera	11	109,272,110 - 109,284,574 (-)	NCBI		Celera
Cytogenetic Map	11	q23.1	NCBI
HuRef	11	108,044,417 - 108,059,257 (-)	NCBI		HuRef
CHM1_1	11	112,002,334 - 112,014,980 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	11	112,258,488 - 112,271,159 (-)	NCBI		T2T-CHM13v2.0

Plet1
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	8	59,738,639 - 59,750,062 (+)	NCBI		GRCr8
mRatBN7.2	8	50,842,242 - 50,853,666 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	8	50,841,854 - 50,853,659 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	8	56,347,681 - 56,359,094 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	8	54,626,579 - 54,637,993 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	8	52,490,849 - 52,502,263 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	8	54,925,624 - 54,937,068 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	8	54,925,607 - 54,937,177 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	8	53,522,634 - 53,534,391 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	8	53,852,103 - 53,863,444 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	8	53,871,156 - 53,882,498 (+)	NCBI
Celera	8	50,391,283 - 50,402,408 (+)	NCBI		Celera
Cytogenetic Map	8	q23	NCBI

Plet1
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0	NW_004955412	13,902,940 - 13,912,761 (-)	NCBI	ChiLan1.0	ChiLan1.0

PLET1
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	9	112,993,663 - 113,015,932 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	11	114,082,475 - 114,110,364 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	11	107,126,523 - 107,141,857 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	11	110,971,824 - 110,984,838 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	11	110,971,824 - 110,984,838 (-)	Ensembl	panpan1.1		panPan2

PLET1
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	5	20,883,678 - 20,894,914 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
Dog10K_Boxer_Tasha	5	20,807,580 - 20,819,776 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	5	20,907,009 - 20,919,208 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	5	20,906,970 - 20,917,050 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	5	20,969,961 - 20,982,157 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	5	20,870,240 - 20,883,318 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	5	20,918,126 - 20,930,544 (+)	NCBI		UU_Cfam_GSD_1.0

PLET1
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	9	39,936,372 - 39,949,683 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	9	39,936,355 - 39,949,709 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	9	44,868,858 - 44,903,234 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3
Pig Cytomap	9	p24-p13	NCBI

PLET1
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	1	103,597,552 - 103,610,483 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
Vero_WHO_p1.0	NW_023666043	22,375,999 - 22,388,933 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Plet1
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla 1.0	NW_004624784	7,378,939 - 7,389,334 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in Plet1
403 total Variants

miRNA Target Status

Predicted Target Of

	Summary Value
Count of predictions:	279
Count of miRNA genes:	243
Interacting mature miRNAs:	261
Transcripts:	ENSMUST00000114474
Prediction methods:	Miranda, Rnahybrid
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCm39)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
1301782	Chol11_m	cholesterol 11 (mouse)			Not determined		9	29292929	63293072	Mouse
4141754	Fecq4_m	fecundity QTL 4 (mouse)			Not determined		9	47543024	57805204	Mouse
11532712	Sluc39d_m	susceptibility to lung cancer 39d (mouse)					9	25587485	59587581	Mouse
11080993	Tglq7_m	triglyceride level QTL 7 (mouse)					9	50111300	51511300	Mouse
12790986	Pcho9_m	plasma cholesterol 9 (mouse)					9	38099575	72099575	Mouse
13504834	Hdlq109_m	HDL QTL 109 (mouse)					9	16709641	50709641	Mouse
1357465	Vtbt6_m	vertebral trabecular bone trait 6 (mouse)			Not determined		9	16978840	50978943	Mouse
14746993	Manh66_m	mandible shape 66 (mouse)					9	49814048	83814048	Mouse
12790992	Arlsq1_m	aortic root lesion size QTL 1 (mouse)					9	38099575	72099575	Mouse
4141224	Dxmod_m	doxorubicin nephropathy modifier (mouse)			Not determined			49452421	101406120	Mouse
1301252	Etohc3_m	ethanol consumption 3 (mouse)			Not determined		9	35034478	69034599	Mouse
1357709	Si5lq3_m	serum IGFBP-5 level QTL 3 (mouse)			Not determined		9	33111025	67111140	Mouse
12791002	Arlsq2_m	aortic root lesion size QTL 2 (mouse)					9	38099575	72099575	Mouse
1301558	Stheal8_m	soft tissue heal 8 (mouse)			Not determined		9	43480714	77480860	Mouse
1301045	Sluc10_m	susceptibility to lung cancer 10 (mouse)			Not determined		9	20306197	54306370	Mouse
1357746	Vtbt7_m	vertebral trabecular bone trait 7 (mouse)			Not determined		9	30739915	64740021	Mouse
1301435	Trigq1_m	triglyceride QTL 1 (mouse)			Not determined		9	44428174	78428262	Mouse
1301051	Eae9_m	susceptibility to experimental allergic encephalomyelitis 9 (mouse)			Not determined		9	49420298	63239852	Mouse
1301049	El4_m	epilepsy 4 (mouse)			Not determined		9	49420298	67151448	Mouse
1301439	Morph2_m	morphine antinociception 2 (mouse)			Not determined		9	20153362	54153492	Mouse
1301692	Hts_m	hypothermia sensitivity (mouse)			Not determined		9	32511172	66511421	Mouse
1558968	Tbdr1_m	body temperature response to dietary restriction, QTL 1 (mouse)			Not determined		9	35034478	69034599	Mouse
4142352	Lmr17_m	leishmaniasis resistance 17 (mouse)			Not determined		9	20306197	54306370	Mouse
12904939	Edlmmq8_m	extensor digitorum longus muscle mass QTL 8 (mouse)					9	20852740	54852740	Mouse
4141071	Ath29_m	atherosclerosis 29 (mouse)			Not determined		9	40419594	74607925	Mouse
1300643	Pvcan2_m	protection against vaginal candidiasis 2 (mouse)			Not determined		9	19943406	53943525	Mouse
4141323	Ptnu3_m	proteinuria 3 (mouse)			Not determined		9	32889702	66889836	Mouse
1302180	Actd4_m	activity-distance traveled 4 (mouse)			Not determined		9	32434563	66434857	Mouse
10043950	Pbft5_m	percent body fat 5 (mouse)			Not determined		9	20306197	54306370	Mouse
11532696	Sluc39c_m	susceptibility to lung cancer 39c (mouse)					9	25587485	59587581	Mouse
11532695	Sluc39b_m	susceptibility to lung cancer 39b (mouse)					9	25587485	59587581	Mouse
11532694	Sluc39a_m	susceptibility to lung cancer 39a (mouse)					9	25587485	59587581	Mouse
13208563	Bmiq8_m	body mass index QTL 8 (mouse)					9	24911296	68907282	Mouse
4141572	Ntta3_m	neurotensin transcript abundance 3 (mouse)			Not determined			46597671	65831177	Mouse
1300563	Pgia5_m	proteoglycan induced arthritis 5 (mouse)			Not determined		9	48831056	82831177	Mouse
10043867	Mtbcq9_m	multiple trait body composition QTL 9 (mouse)			Not determined		9	26796421	60796552	Mouse
1558993	Tdmq1_m	type 2 diabetes modifying QTL 1 (mouse)			Not determined		9	40419594	51808670	Mouse
1301972	Cocrb8_m	cocaine related behavior 8 (mouse)			Not determined		9	35034478	69034599	Mouse
10043987	Stheal13_m	soft tissue heal 13 (mouse)			Not determined		9	26796421	60796552	Mouse
1558872	Ibdq1_m	inflammatory bowel disease QTL 1 (mouse)			Not determined		9	33978840	73439255	Mouse
1301184	Bdln4_m	body length 4 (mouse)			Not determined		9	50151320	84151448	Mouse
12738449	Spcq2_m	sperm count QTL 2 (mouse)					9	39399885	73399885	Mouse
1301702	Brm1_m	brachyury modifier 1 (mouse)			Not determined		9	40805047	74805204	Mouse
1300932	Hdlq17_m	HDL QTL 17 (mouse)			Not determined		9	26796421	60796552	Mouse
10043971	Obq32_m	obesity QTL 32 (mouse)			Not determined		9	37819528	71819528	Mouse
10043847	Hdlq89_m	HDL QTL 89 (mouse)			Not determined		9	29292929	63293072	Mouse
10045639	Heal28_m	wound healing/regeneration 28 (mouse)			Not determined		9	43480714	77480860	Mouse
4141148	Cq5_m	cholesterol QTL 5 (mouse)			Not determined		9	32452421	66452546	Mouse
4142042	Alpq3_m	alcohol preference QTL 3 (mouse)			Not determined		9	37306197	98701707	Mouse
1301365	Ap5q_m	alcohol preference 5 QTL (mouse)			Not determined		9	30053164	64053277	Mouse
1301883	Skull12_m	skull morphology 12 (mouse)			Not determined		9	20306197	54306370	Mouse
1300716	Cd4ts4_m	CD4 T cell subset 4 (mouse)			Not determined		9	48831056	82831177	Mouse
10043878	Adip20_m	adiposity 20 (mouse)			Not determined		9	27251194	61251323	Mouse
13515057	Adip20b_m	adiposity 20b (mouse)					9	48700908	53791702	Mouse

Markers in Region

AU043048

Mouse Assembly	Chr	Position (strand)	Source	JBrowse
GRCm38	9	50,504,716 - 50,504,850	UniSTS	GRCm38
MGSCv37	9	50,312,821 - 50,312,955	UniSTS	GRCm37
Celera	9	47,794,531 - 47,794,665	UniSTS
Cytogenetic Map	9	B	UniSTS
Whitehead/MRC_RH	9	518.74	UniSTS

RH124650

Mouse Assembly	Chr	Position (strand)	Source	JBrowse
GRCm38	9	50,504,771 - 50,505,029	UniSTS	GRCm38
MGSCv37	9	50,312,876 - 50,313,134	UniSTS	GRCm37
Celera	9	47,794,586 - 47,794,844	UniSTS
Cytogenetic Map	9	B	UniSTS

1600029D21Rik

Mouse Assembly	Chr	Position (strand)	Source	JBrowse
Cytogenetic Map	9	B	UniSTS
cM Map	9		UniSTS

1600029D21Rik

Mouse Assembly	Chr	Position (strand)	Source	JBrowse
Cytogenetic Map	9	B	UniSTS

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_029639	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AC127254	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK002767	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK005558	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AY364436	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC017624	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC022950	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH466522	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSMUST00000114474 ⟹ ENSMUSP00000110118

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	9	50,405,825 - 50,416,782 (+)	Ensembl
GRCm38.p6 Ensembl	9	50,494,525 - 50,505,482 (+)	Ensembl

Ensembl Acc Id:

ENSMUST00000188047 ⟹ ENSMUSP00000139422

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	9	50,405,827 - 50,413,279 (+)	Ensembl
GRCm38.p6 Ensembl	9	50,494,527 - 50,501,979 (+)	Ensembl

RefSeq Acc Id:

NM_029639 ⟹ NP_083915

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	9	50,405,825 - 50,416,939 (+)	NCBI
GRCm38	9	50,494,525 - 50,505,639 (+)	ENTREZGENE
MGSCv37	9	50,302,630 - 50,313,744 (+)	RGD
Celera	9	47,784,391 - 47,795,440 (+)	RGD
cM Map	9		ENTREZGENE

Sequence:

show sequence

ACTACTGCCAGGCCCTGCAACCCAAACAGCCCGGGACCATGCTGTCGCTCCGCTCCTTGCTTCC
ACACCTGGGACTGTTCCTGTGCCTGGCTCTGCACTTATCCCCCTCCCTCTCTGCCAGTGATAAT
GGGTCCTGCGTGGTCCTTGATAACATCTACACCTCCGACATCTTGGAAATCAGCACTATGGCTA
ACGTCTCTGGTGGGGATGTAACCTATACAGTGACGGTCCCCGTGAACGATTCAGTCAGTGCCGT
GATCCTGAAAGCAGTGAAGGAGGACGACAGCCCAGTGGGCACCTGGAGTGGAACATATGAGAAG
TGCAACGACAGCAGTGTCTACTATAACTTGACATCCCAAAGCCAGTCGGTCTTCCAGACAAACT
GGACAGTTCCTACTTCCGAGGATGTGACTAAAGTCAACCTGCAGGTCCTCATCGTCGTCAATCG
CACAGCCTCAAAGTCATCCGTGAAAATGGAACAAGTACAACCCTCAGCCTCAACCCCTATTCCT
GAGAGTTCTGAGACCAGCCAGACCATAAACACGACTCCAACTGTGAACACAGCCAAGACTACAG
CCAAGGACACAGCCAACACCACAGCCGTGACCACAGCCAATACCACAGCCAATACCACAGCCGT
GACCACAGCCAAGACCACAGCCAAAAGCCTGGCCATCCGCACTCTCGGCAGCCCCCTGGCAGGT
GCCCTCCATATCCTGCTTGTTTTTCTCATTAGTAAACTCCTCTTCTAAAGAAAACTGGGGAAGC
AGATCTCCAACCTCCAGGTCATCCTCCCGAGCTCATTTCAGGCCAGTGCTTAAACATACCCGAA
TGAAGGTTTTATGTCCTCAGTCCGCAGCTCCACCACCTTGGACCACAGACCTGCAACACTAGTG
CACTTGAGGGATACAAATGCTTGCCTGGATCTTTCAGGGCACAAATTCCGCTTCTTGTAAATAC
TTAGTCCATCCATCCTGCGTGTAACCTGAAGTTCTGACTCTCAGTTTAACCTGTTGACAGCCAA
TCTGAACTTGTGTTTCTTGCCAAAGGTATTCCCATGAGCCTCCTGGGTGTGGGGGTGGGGAGGG
AATGATCCTTCTTTACTTTCAAACTGATTTCAGATTTCTGGCCAAACCTACTCAGGTTGCAAAG
GACTTATGTGACTTATGTGACTGTAGGAAAAAGAGAAATGAGTGATCATCCTGTGGCTACTAGC
AGATTTCCACTGTGCCCAGACCAGTCGGTAGGTTTTGAAGGAAGTATATGAAAACTGTGCCTCA
GAAGCCAATGACAGGACACATGACTTTTTTTTTCTAAGTCAAATAAACAATATATTGAACAAGA
ATACCGAAATGTGCTAAATTGAAAGATAACCCTTAATGAGTGATAAAATACAAAGTGTTACCTA
ACTTTGTTTTTAGAACTAGGAATAAAAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG
TGTGTGTGTGTTTTCAAGGACAGATGCAAGGTTAATTTATCTCAGTTTTGTTTTGTCCAGTCAA
AGCTGGTCATTTCTTCCTTGATGATAATTTATACCAGGAAATGGGCCAAAAAAGAAAATGCTTG
TAATATTTATAGTACAACGTGAAACCAAAAAAAAAAAGTTATTTCCAACAATAAGCCTGTAATA
AGAAATAAAAGTTTTCCTTTAATAATTCCTTTTCTATACCGTCCAGGACCCAGGGGTGAGCACC
ACCCAGCTCAATCATTAATCAAGAAAATGTCCCTCTGCTTACATTCTCTCCTCCCAGATTACCC
TGGCCTGTGTCACGCTGACAAAAGTCTGACCAGCTCACAGTGTGCATAAGGTCC

hide sequence

Protein Sequences


Protein RefSeqs	NP_083915	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAH17624	(Get FASTA)	NCBI Sequence Viewer
	AAH22950	(Get FASTA)	NCBI Sequence Viewer
	AAQ72439	(Get FASTA)	NCBI Sequence Viewer
	BAB22342	(Get FASTA)	NCBI Sequence Viewer
	BAB24118	(Get FASTA)	NCBI Sequence Viewer
	EDL25735	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSMUSP00000110118
	ENSMUSP00000110118.2
	ENSMUSP00000139422.2
GenBank Protein	Q8VEN2	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:	NP_083915 ⟸ NM_029639
- Peptide Label:	precursor
- UniProtKB:	Q9DAT1 (UniProtKB/Swiss-Prot), Q05DM2 (UniProtKB/Swiss-Prot), Q9DCI0 (UniProtKB/Swiss-Prot), Q8VEN2 (UniProtKB/Swiss-Prot)
- Sequence:	show sequence MLSLRSLLPHLGLFLCLALHLSPSLSASDNGSCVVLDNIYTSDILEISTMANVSGGDVTYTVTV PVNDSVSAVILKAVKEDDSPVGTWSGTYEKCNDSSVYYNLTSQSQSVFQTNWTVPTSEDVTKVN LQVLIVVNRTASKSSVKMEQVQPSASTPIPESSETSQTINTTPTVNTAKTTAKDTANTTAVTTA NTTANTTAVTTAKTTAKSLAIRTLGSPLAGALHILLVFLISKLLF hide sequence

Ensembl Acc Id:

ENSMUSP00000139422 ⟸ ENSMUST00000188047

Ensembl Acc Id:

ENSMUSP00000110118 ⟸ ENSMUST00000114474

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-Q8VEN2-F1-model_v2	AlphaFold	Q8VEN2	1-237	view protein structure

Promoters

RGD ID:

6843927

Promoter ID:

MM_KWN:57285

Type:

Non-CpG

SO ACC ID:

SO:0000170

Source:

MPROMDB

Tissues & Cell Lines:

ES_Cell, Kidney, Lung

Transcripts:

ENSMUST00000034572, NM_029639

Position:

Mouse Assembly	Chr	Position (strand)	Source
MGSCv36	9	50,302,504 - 50,303,004 (+)	MPROMDB

RGD ID:

8669534

Promoter ID:

EPDNEW_M12798

Type:

multiple initiation site

Name:

Plet1_1

Description:

Mus musculus placenta expressed transcript 1 , mRNA.

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm38	9	50,494,525 - 50,494,585	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	MGI:1923759	AgrOrtholog
Ensembl Genes	ENSMUSG00000032068	Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript	ENSMUST00000114474	ENTREZGENE
	ENSMUST00000114474.8	UniProtKB/Swiss-Prot
	ENSMUST00000188047.2	UniProtKB/Swiss-Prot
InterPro	PLET1	UniProtKB/Swiss-Prot
KEGG Report	mmu:76509	UniProtKB/Swiss-Prot
MGD	MGI:1923759	ENTREZGENE
NCBI Gene	76509	ENTREZGENE
PANTHER	PLACENTA-EXPRESSED TRANSCRIPT 1 PROTEIN	UniProtKB/Swiss-Prot
	PTHR22527	UniProtKB/Swiss-Prot
PhenoGen	Plet1	PhenoGen
UniProt	PLET1_MOUSE	UniProtKB/Swiss-Prot
	Q05DM2	ENTREZGENE
	Q8VEN2	ENTREZGENE
	Q9DAT1	ENTREZGENE
	Q9DCI0	ENTREZGENE
UniProt Secondary	Q05DM2	UniProtKB/Swiss-Prot
	Q9DAT1	UniProtKB/Swiss-Prot
	Q9DCI0	UniProtKB/Swiss-Prot

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2013-11-19	Plet1	placenta expressed transcript 1	1600029D21Rik	RIKEN cDNA 1600029D21 gene	Symbol and/or name change	5135510	APPROVED

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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