Begain (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCm39 | 12 | 108,998,107 - 109,034,168 (-) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 12 | 108,998,113 - 109,034,143 (-) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 12 | 109,032,181 - 109,068,242 (-) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 12 | 109,032,187 - 109,068,217 (-) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 12 | 110,270,392 - 110,306,427 (-) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 12 | 109,479,989 - 109,535,141 (-) | NCBI | | MGSCv36 | mm8 | | Celera | 12 | 110,263,785 - 110,300,128 (-) | NCBI | | Celera | | | Cytogenetic Map | 12 | F1 | NCBI | | | | | cM Map | 12 | 59.98 | NCBI | | | | |
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BEGAIN (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCh38 | 14 | 100,537,147 - 100,587,417 (-) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 14 | 100,537,147 - 100,587,417 (-) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 14 | 101,003,484 - 101,053,754 (-) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 14 | 100,073,240 - 100,105,884 (-) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Build 34 | 14 | 100,073,240 - 100,105,884 | NCBI | | | | | Celera | 14 | 81,058,597 - 81,067,990 (-) | NCBI | | Celera | | | Cytogenetic Map | 14 | q32.2 | NCBI | | | | | HuRef | 14 | 81,184,789 - 81,217,351 (-) | NCBI | | HuRef | | | CHM1_1 | 14 | 100,941,743 - 100,974,254 (-) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 14 | 94,770,948 - 94,821,230 (-) | NCBI | | T2T-CHM13v2.0 | | |
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Begain (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCr8 | 6 | 133,708,010 - 133,744,264 (-) | NCBI | | GRCr8 | | | mRatBN7.2 | 6 | 127,943,651 - 127,979,876 (-) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 6 | 127,943,651 - 127,979,841 (-) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | 6 | 128,066,312 - 128,102,557 (-) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 6 | 128,362,113 - 128,398,358 (-) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 6 | 127,721,997 - 127,758,239 (-) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 6 | 132,936,964 - 132,972,569 (-) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 6 | 132,936,970 - 132,972,511 (-) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 6 | 142,107,875 - 142,129,457 (-) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 6 | 133,296,175 - 133,317,921 (+) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | RGSC_v3.1 | 6 | 133,303,261 - 133,323,875 (+) | NCBI | | | | | Celera | 6 | 125,492,047 - 125,528,044 (-) | NCBI | | Celera | | | Cytogenetic Map | 6 | q32 | NCBI | | | | |
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Begain (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChiLan1.0 Ensembl | NW_004955438 | 21,572,079 - 21,580,311 (-) | Ensembl | ChiLan1.0 | | | | ChiLan1.0 | NW_004955438 | 21,572,080 - 21,580,311 (-) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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BEGAIN (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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NHGRI_mPanPan1-v2 | 15 | 101,688,579 - 101,740,523 (-) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 14 | 100,905,073 - 100,957,017 (-) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 14 | 81,157,642 - 81,209,503 (-) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 14 | 100,471,147 - 100,484,789 (-) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 14 | 100,471,969 - 100,512,416 (-) | Ensembl | panpan1.1 | | panPan2 | |
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BEGAIN (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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CanFam3.1 | 8 | 68,794,403 - 68,838,471 (-) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 8 | 68,795,049 - 68,838,789 (-) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 8 | 68,312,154 - 68,356,461 (-) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 8 | 69,077,572 - 69,121,859 (-) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 8 | 69,078,224 - 69,112,547 (-) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 8 | 68,739,219 - 68,783,609 (-) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 8 | 68,805,347 - 68,849,655 (-) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 8 | 69,202,993 - 69,230,912 (-) | NCBI | | UU_Cfam_GSD_1.0 | | |
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Begain (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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HiC_Itri_2 | NW_024408640 | 5,904,482 - 5,919,740 (+) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936604 | 4,162,658 - 4,195,815 (-) | Ensembl | SpeTri2.0 | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936604 | 4,162,728 - 4,195,540 (-) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
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BEGAIN (Sus scrofa - pig) |
Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
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Sscrofa11.1 Ensembl | 7 | 121,389,563 - 121,434,426 (-) | Ensembl | Sscrofa11.1 | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 7 | 121,389,554 - 121,434,420 (-) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 7 | 132,475,790 - 132,478,450 (-) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
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BEGAIN (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
ChlSab1.1 | 24 | 78,501,920 - 78,552,954 (-) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 24 | 78,501,870 - 78,511,496 (-) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666053 | 65,640,475 - 65,690,691 (-) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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Begain (Heterocephalus glaber - naked mole-rat) |
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