Kctd10 (potassium channel tetramerisation domain containing 10) - Rat Genome Database

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Gene: Kctd10 (potassium channel tetramerisation domain containing 10) Mus musculus
Analyze
Symbol: Kctd10
Name: potassium channel tetramerisation domain containing 10
RGD ID: 1614050
MGI Page MGI
Description: Predicted to enable Notch binding activity and identical protein binding activity. Predicted to contribute to ubiquitin-protein transferase activity. Acts upstream of or within angiogenesis; heart development; and negative regulation of Notch signaling pathway. Part of MKS complex. Is expressed in clavicle; mandible; maxilla; midgut; and rib. Orthologous to human KCTD10 (potassium channel tetramerization domain containing 10).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: AW536343; BTB/POZ domain-containing adapter for CUL3-mediated RhoA degradation protein 3; BTB/POZ domain-containing protein KCTD10; C87062; mBACURD3; MGC11654; potassium channel tetramerization domain-containing 10
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm395114,501,633 - 114,518,566 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl5114,501,628 - 114,518,569 (-)EnsemblGRCm39 Ensembl
GRCm385114,363,572 - 114,380,505 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl5114,363,567 - 114,380,508 (-)EnsemblGRCm38mm10GRCm38
MGSCv375114,813,581 - 114,830,514 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv365114,624,573 - 114,641,470 (-)NCBIMGSCv36mm8
Celera5111,462,745 - 111,479,629 (-)NCBICelera
Cytogenetic Map5FNCBI
cM Map555.99NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

Phenotype Annotations     Click to see Annotation Detail View
References

References - curated
# Reference Title Reference Citation
1. Mouse MP Annotation Import Pipeline RGD automated import pipeline
2. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:10349636   PMID:10512203   PMID:10725249   PMID:10922068   PMID:11042159   PMID:11076861   PMID:11217851   PMID:12466851   PMID:12477932   PMID:12520002   PMID:12904583   PMID:14610273  
PMID:15489334   PMID:15741177   PMID:15782199   PMID:15840001   PMID:16141072   PMID:16141073   PMID:16602821   PMID:16778019   PMID:18799693   PMID:21267068   PMID:21677750   PMID:21873635  
PMID:22179047   PMID:25401743   PMID:26921296   PMID:30973865   PMID:32325033   PMID:34854382   PMID:36417873   PMID:37142655   PMID:38355793   PMID:38489388  


Genomics

Comparative Map Data
Kctd10
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm395114,501,633 - 114,518,566 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl5114,501,628 - 114,518,569 (-)EnsemblGRCm39 Ensembl
GRCm385114,363,572 - 114,380,505 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl5114,363,567 - 114,380,508 (-)EnsemblGRCm38mm10GRCm38
MGSCv375114,813,581 - 114,830,514 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv365114,624,573 - 114,641,470 (-)NCBIMGSCv36mm8
Celera5111,462,745 - 111,479,629 (-)NCBICelera
Cytogenetic Map5FNCBI
cM Map555.99NCBI
KCTD10
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh3812109,448,655 - 109,477,300 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl12109,448,655 - 109,477,359 (-)EnsemblGRCh38hg38GRCh38
GRCh3712109,886,460 - 109,915,105 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 3612108,370,843 - 108,399,538 (-)NCBINCBI36Build 36hg18NCBI36
Build 3412108,349,180 - 108,377,822NCBI
Celera12109,510,834 - 109,539,530 (-)NCBICelera
Cytogenetic Map12q24.11NCBI
HuRef12106,904,465 - 106,933,134 (-)NCBIHuRef
CHM1_112109,854,311 - 109,883,007 (-)NCBICHM1_1
T2T-CHM13v2.012109,423,549 - 109,452,209 (-)NCBIT2T-CHM13v2.0
Kctd10
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81247,890,777 - 47,909,391 (+)NCBIGRCr8
mRatBN7.21242,230,159 - 42,248,792 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1242,230,269 - 42,248,783 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1243,397,558 - 43,416,048 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01244,011,152 - 44,029,642 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01243,071,655 - 43,090,147 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01247,992,079 - 48,010,531 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1247,992,091 - 48,010,583 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01249,784,117 - 49,801,889 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Celera1243,841,923 - 43,860,517 (+)NCBICelera
Cytogenetic Map12q16NCBI
Kctd10
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554559,032,697 - 9,065,951 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554559,032,697 - 9,064,827 (+)NCBIChiLan1.0ChiLan1.0
KCTD10
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v210117,515,651 - 117,544,388 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan112117,512,051 - 117,540,789 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v012107,025,380 - 107,054,118 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.112110,419,859 - 110,449,017 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl12110,419,859 - 110,448,773 (-)Ensemblpanpan1.1panPan2
KCTD10
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12617,592,157 - 17,625,384 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2617,604,261 - 17,743,177 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2618,176,225 - 18,204,087 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.02617,941,575 - 17,969,471 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2617,941,679 - 17,969,483 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12618,385,565 - 18,413,314 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02617,930,466 - 17,958,242 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02617,950,144 - 17,977,917 (+)NCBIUU_Cfam_GSD_1.0
Kctd10
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405118144,278,340 - 144,304,171 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049367691,171,707 - 1,197,537 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049367691,171,725 - 1,197,497 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
KCTD10
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1441,442,777 - 41,470,209 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11441,442,628 - 41,470,215 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21443,959,328 - 43,986,956 (+)NCBISscrofa10.2Sscrofa10.2susScr3
KCTD10
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.111104,684,625 - 104,715,013 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl11104,683,777 - 104,714,974 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_023666037140,403,914 - 140,433,417 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Kctd10
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462474710,951,883 - 10,979,210 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462474710,951,870 - 10,978,045 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Kctd10
967 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:2283
Count of miRNA genes:740
Interacting mature miRNAs:944
Transcripts:ENSMUST00000001125, ENSMUST00000102581, ENSMUST00000123538, ENSMUST00000132646, ENSMUST00000134173, ENSMUST00000134532, ENSMUST00000135170
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1301399Cpfd3_mcerebellum pattern fissures (mouse)Not determined587386871121387065Mouse
25314310Syncl4_msynaptonemal complex length 4 (mouse)5103047866115538059Mouse
1357725Eae39_mexperimental allergic encephalomyelitis 39 (mouse)Not determined589418876118864028Mouse
25314315Mlh1fc4_mMLH1 foci count 4 (mouse)574460661132528839Mouse
14746986Manh58_mmandible shape 58 (mouse)5102446283136446283Mouse
25314317Sccor3_msynaptonemal complex length to mean MLH1 count ratio 3 (mouse)5104347866114738061Mouse
1300993Hycdc_mhypercapnic duty cycle (mouse)Not determined590561006124561151Mouse
1301126Bwem1_mbody weight day 30 males 1 (mouse)Not determined587386871121387065Mouse
1300659Pcd8ts1_mp-glycoprotein positive CD8 T cell subset 1 (mouse)Not determined597021753131021986Mouse
1301042Elmaz1_melevated maze behavior 1 (mouse)Not determined598019649116876624Mouse
1300913Bwefm_mbody weight females and males day 10 (mouse)Not determined5109439348143439459Mouse
10402486Dipa1_mdrug induced psychomotor activation 1 (mouse)Not determined595465549129465722Mouse
1357886Diht_mdopamine-induced hypothermia (mouse)Not determined5104498738115101540Mouse
10043958Chldq12_mcholesterol and HDL QTL 12 (mouse)Not determined587386871121387065Mouse
26884395Humsd2_mhumerus midshaft diameter 2, 10 week (mouse)570057343132528839Mouse
1301543Hypch_mhypercholesterolemia (mouse)Not determined5109238624139118905Mouse
10412202Bbaa26_mB.burgdorferi-associated arthritis 26 (mouse)Not determined5104583688138555455Mouse
12904945Tammq2_mtibialis anterior muscle mass QTL 2 (mouse)5100665965134665965Mouse
4142473Chlq11_mcirculating hormone level QTL 11 (mouse)Not determined5107906299141906412Mouse
1301419Cypr3_mcytokine production 3 (mouse)Not determined581019649115019803Mouse
11341716Rvfs3_mRift Valley fever susceptibility 3 (mouse)526441234138455402Mouse
10412197Bbaa25_mB.burgdorferi-associated arthritis 25 (mouse)Not determined5109167240143167381Mouse
12904959Smmq1_msoleus muscle mass QTL 1 (mouse)5100665965134665965Mouse
13506928Recrq8_mrecombination rate in male meiosis QTL 8 (mouse)574460661132528839Mouse
27226719Tibw6_mtibia width 6, proximal, 16 week (mouse)572857343139985755Mouse
1301457Cfsw2_mcystic fibrosis survival to weaning 2 (mouse)Not determined590561006124561151Mouse
10401245Bglu18_mblood glucose level 18 (mouse)Not determined582838468116838597Mouse
1301974Chab7_mcholesterol absorption 7 (mouse)Not determined595233214129233330Mouse
11528550Sluc33_msusceptibility to lung cancer 33 (mouse)5104386871120711986Mouse
1357662Lprq4_mlipoprotein QTL 4 (mouse)Not determined5114021753129632606Mouse
4142064Tmc1m4_mTmc1 modifier 4 (mouse)Not determined554500177127001072Mouse
10412239Alpq7_malcohol preference QTL 7 (mouse)Not determined5104705939138705939Mouse
1300801Drb2_mdopamine receptor binding 2 (mouse)Not determined587386871121387065Mouse
9587780Afw16_mabdominal fat weight QTL 16 (mouse)Not determined592830166126830285Mouse
1357644Egrd1_mearly growth rate, direct effect 1 (mouse)Not determined595434580129434786Mouse
12859290Criq2_mCitrobacter rodentium infection QTL 2 (mouse)5101332579135332579Mouse
1300940Actd3_mactivity-distance traveled 3 (mouse)Not determined596320385130320533Mouse
10755524Mono1_mmonocyte differential 1 (mouse)580849259114849259Mouse
1558774Lith17_mlithogenic gene 17 (mouse)Not determined595465549129465722Mouse
1301362Prnr1_mprion resistance 1 (mouse)Not determined589418876146787935Mouse
1357431Cia27_mcollagen induced arthritis 27 (mouse)Not determined575315348120018629Mouse
1301624Aevm2_mautoimmune extremity vasculitis in MRL mice 2 (mouse)Not determined5101863832135864028Mouse
4141652Mrdq2_mmodifier of retinal degeneration QTL 2 (mouse)Not determined110253106118093673Mouse
10043890Trigq4_mtriglyceride QTL 4 (mouse)Not determined5107906299141906412Mouse
4141139Hmtb4_mhemostasis and thrombosis rebleeding time 4 (mouse)Not determined108762509126882944Mouse
11532736Sluc33b_msusceptibility to lung cancer 33b (mouse)5102945037136945196Mouse
4141519Hmtb5_mhemostasis and thrombosis bleeding time 5 (mouse)Not determined99949422126882944Mouse
1301858Smdq1_msegregation of mitochondrial DNA QTL 1 (mouse)Not determined597021753131021986Mouse
11049562Lmr24f_mleishmaniasis resistance 24f (mouse)590320962124321041Mouse
13464251Ahl21_mage related hearing loss, early onset 21 (mouse)5109167240143167381Mouse
13464244Ahl19_mage related hearing loss, early onset 19 (mouse)595465549129465722Mouse
1300968Skts4_mskin tumor susceptibility 4 (mouse)Not determined589418876124238239Mouse
13464241Ahl18_mage related hearing loss, early onset 18 (mouse)587386871121387065Mouse
1301102Cia14_mcollagen induced arthritis 14 (mouse)Not determined5113320385138555455Mouse
13464243Ahl20_mage related hearing loss, early onset 20 (mouse)5107906299141906412Mouse
13464242Ahl17_mage related hearing loss, early onset 17 (mouse)582838468116838597Mouse

Markers in Region
C87062  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm385114,363,675 - 114,363,919UniSTSGRCm38
MGSCv375114,813,684 - 114,813,928UniSTSGRCm37
Celera5111,462,848 - 111,463,092UniSTS
Cytogenetic Map5FUniSTS
Whitehead/MRC_RH51409.87UniSTS
AW536343  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm385114,363,981 - 114,364,129UniSTSGRCm38
GRCm38X52,712,021 - 52,712,170UniSTSGRCm38
MGSCv375114,813,990 - 114,814,138UniSTSGRCm37
MGSCv37X50,065,198 - 50,065,347UniSTSGRCm37
Celera5111,463,154 - 111,463,302UniSTS
Cytogenetic Map5FUniSTS
Whitehead/MRC_RH51409.98UniSTS


Expression

RNA-SEQ Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001159941 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_026145 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC127255 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC132102 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK014246 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK028657 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK041516 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK145295 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK147714 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK161199 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK163351 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK166505 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK181579 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK182199 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK182204 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK191680 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK192262 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK193695 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK194384 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK194407 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK194957 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK195257 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK195723 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK196475 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK200794 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK205109 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK205327 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK205494 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK206688 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK207420 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK214259 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK215203 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK216751 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK218634 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BB855690 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC006935 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BQ571808 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466529 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DQ724144 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSMUST00000001125   ⟹   ENSMUSP00000001125
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl5114,503,683 - 114,518,544 (-)Ensembl
GRCm38.p6 Ensembl5114,365,622 - 114,380,483 (-)Ensembl
Ensembl Acc Id: ENSMUST00000102581   ⟹   ENSMUSP00000099641
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl5114,501,628 - 114,518,569 (-)Ensembl
GRCm38.p6 Ensembl5114,363,567 - 114,380,508 (-)Ensembl
Ensembl Acc Id: ENSMUST00000123538
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl5114,505,045 - 114,507,313 (-)Ensembl
GRCm38.p6 Ensembl5114,366,984 - 114,369,252 (-)Ensembl
Ensembl Acc Id: ENSMUST00000132646
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl5114,504,944 - 114,506,730 (-)Ensembl
GRCm38.p6 Ensembl5114,366,883 - 114,368,669 (-)Ensembl
Ensembl Acc Id: ENSMUST00000134173
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl5114,503,767 - 114,510,203 (-)Ensembl
GRCm38.p6 Ensembl5114,365,706 - 114,372,142 (-)Ensembl
Ensembl Acc Id: ENSMUST00000134532   ⟹   ENSMUSP00000138564
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl5114,502,523 - 114,518,550 (-)Ensembl
GRCm38.p6 Ensembl5114,364,462 - 114,380,489 (-)Ensembl
Ensembl Acc Id: ENSMUST00000135170
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl5114,504,964 - 114,508,268 (-)Ensembl
GRCm38.p6 Ensembl5114,366,903 - 114,370,207 (-)Ensembl
RefSeq Acc Id: NM_001159941   ⟹   NP_001153413
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm395114,501,633 - 114,518,566 (-)NCBI
GRCm385114,363,572 - 114,380,505 (-)NCBI
MGSCv375114,813,581 - 114,830,514 (-)RGD
Celera5111,462,745 - 111,479,629 (-)RGD
cM Map5 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_026145   ⟹   NP_080421
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm395114,501,633 - 114,518,566 (-)NCBI
GRCm385114,363,572 - 114,380,505 (-)NCBI
MGSCv375114,813,581 - 114,830,514 (-)RGD
Celera5111,462,745 - 111,479,629 (-)RGD
cM Map5 ENTREZGENE
Sequence:
RefSeq Acc Id: NP_080421   ⟸   NM_026145
- Peptide Label: isoform 2
- UniProtKB: Q922M3 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001153413   ⟸   NM_001159941
- Peptide Label: isoform 1
- UniProtKB: F8WGQ9 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSMUSP00000001125   ⟸   ENSMUST00000001125
Ensembl Acc Id: ENSMUSP00000138564   ⟸   ENSMUST00000134532
Ensembl Acc Id: ENSMUSP00000099641   ⟸   ENSMUST00000102581
Protein Domains
BTB   Potassium channel tetramerisation-type BTB

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q922M3-F1-model_v2 AlphaFold Q922M3 1-315 view protein structure

Promoters
RGD ID:6887676
Promoter ID:EPDNEW_M7288
Type:initiation region
Name:Kctd10_1
Description:Mus musculus potassium channel tetramerisation domain containing10 , transcript variant 2, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm385114,380,466 - 114,380,526EPDNEW
RGD ID:6837760
Promoter ID:MM_KWN:43549
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:BoneMarrow_2Hour,   BoneMarrow_4Hour,   Kidney,   Lung,   MEF_B4,   MEF_B6
Transcripts:OTTMUST00000034272,   OTTMUST00000034274
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv365114,818,386 - 114,819,967 (-)MPROMDB
RGD ID:6837757
Promoter ID:MM_KWN:43550
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day0,   3T3L1_Day1,   BoneMarrow_2Hour,   Brain,   Kidney,   Lung,   MEF_B4,   MEF_B6
Transcripts:OTTMUST00000034273
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv365114,820,116 - 114,821,067 (-)MPROMDB
RGD ID:6837758
Promoter ID:MM_KWN:43551
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day0,   3T3L1_Day1,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Kidney,   Lung,   MEF_B4,   MEF_B6
Transcripts:OTTMUST00000034271
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv365114,821,686 - 114,822,692 (-)MPROMDB
RGD ID:6838574
Promoter ID:MM_KWN:43552
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day0,   3T3L1_Day1,   3T3L1_Day2,   3T3L1_Day3,   3T3L1_Day4,   3T3L1_Day6,   BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   ES_Cell,   Kidney,   Liver,   Lung,   MEF_B4,   MEF_B6,   Spleen
Transcripts:NM_001159941,   OTTMUST00000034251,   OTTMUST00000034252,   OTTMUST00000034306,   OTTMUST00000034307,   OTTMUST00000034308
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv365114,829,731 - 114,831,432 (+)MPROMDB

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:2141207 AgrOrtholog
Ensembl Genes ENSMUSG00000001098 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000001125 ENTREZGENE
  ENSMUST00000001125.6 UniProtKB/TrEMBL
  ENSMUST00000102581 ENTREZGENE
  ENSMUST00000102581.11 UniProtKB/Swiss-Prot
  ENSMUST00000134532.9 UniProtKB/TrEMBL
InterPro BACURD1-3 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  BTB/POZ_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SKP1/BTB/POZ_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  T1-type_BTB UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:330171 UniProtKB/Swiss-Prot
MGD MGI:2141207 ENTREZGENE
NCBI Gene 330171 ENTREZGENE
PANTHER BTB/POZ DOMAIN-CONTAINING ADAPTER FOR CUL3-MEDIATED RHOA DEGRADATION PROTEIN 3 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PTHR11145 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam BTB_2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Kctd10 PhenoGen
PROSITE BTB UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
SMART BTB UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF54695 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt BACD3_MOUSE UniProtKB/Swiss-Prot
  F8WGQ9 ENTREZGENE, UniProtKB/TrEMBL
  Q922M3 ENTREZGENE
  S4R2A3_MOUSE UniProtKB/TrEMBL