Mir34a (microRNA 34a) - Rat Genome Database

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Gene: Mir34a (microRNA 34a) Mus musculus
Analyze
Symbol: Mir34a
Name: microRNA 34a
RGD ID: 1608206
MGI Page MGI
Description: Acts upstream of or within several processes, including cellular response to leukemia inhibitory factor; miRNA-mediated post-transcriptional gene silencing; and sensory perception of sound. Is expressed in several structures, including brain; branchial arch; sensory organ; skin; and somite. Human ortholog(s) of this gene implicated in hepatocellular carcinoma. Orthologous to human MIR34A (microRNA 34a).
Type: ncrna (Ensembl: miRNA)
RefSeq Status: PROVISIONAL
Previously known as: Mir; mir-34a; Mirn34a; mmu-mir-; mmu-mir-34a
RGD Orthologs
Human
Rat
Dog
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm394150,152,911 - 150,153,012 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl4150,152,911 - 150,153,012 (+)EnsemblGRCm39 Ensembl
GRCm384150,068,454 - 150,068,555 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl4150,068,454 - 150,068,555 (+)EnsemblGRCm38mm10GRCm38
MGSCv374149,442,563 - 149,442,664 (+)NCBIGRCm37MGSCv37mm9NCBIm37
Celera4152,344,303 - 152,344,404 (+)NCBICelera
Cytogenetic Map4E2NCBI
cM Map480.85NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(-)-citrinin  (ISO)
1,3,5-trinitro-1,3,5-triazinane  (EXP)
2,3,7,8-tetrachlorodibenzodioxine  (ISO)
2-acetamidofluorene  (ISO)
3,7-dihydropurine-6-thione  (ISO)
3-\{1-[3-(dimethylamino)propyl]-1H-indol-3-yl\}-4-(1H-indol-3-yl)-1H-pyrrole-2,5-dione  (ISO)
6-chloro-2,3,4,9-tetrahydro-1H-carbazole-1-carboxamide  (ISO)
aflatoxin B1  (ISO)
all-trans-retinoic acid  (ISO)
alpha-D-galactose  (ISO)
aniline  (ISO)
aristolochic acid A  (ISO)
arsane  (ISO)
arsenic atom  (ISO)
arsenite(3-)  (ISO)
arsenous acid  (EXP)
atrazine  (ISO)
benzene  (EXP)
benzo[a]pyrene  (EXP,ISO)
Betanin  (ISO)
bis(2-ethylhexyl) phthalate  (ISO)
bisphenol A  (ISO)
bleomycin A2  (ISO)
buta-1,3-diene  (EXP)
Butylbenzyl phthalate  (EXP,ISO)
cadmium atom  (ISO)
cadmium dichloride  (EXP,ISO)
camptothecin  (ISO)
cannabidiol  (EXP)
chenodeoxycholic acid  (ISO)
chlorendic acid  (ISO)
choline  (EXP)
cisplatin  (EXP,ISO)
crocin-1  (ISO)
curcumin  (ISO)
cyclosporin A  (ISO)
dexmedetomidine  (ISO)
diarsenic trioxide  (EXP)
dibutyl phthalate  (ISO)
diisononyl phthalate  (ISO)
Diosbulbin B  (EXP)
dioxygen  (ISO)
dorsomorphin  (ISO)
doxorubicin  (EXP,ISO)
ethanol  (EXP,ISO)
folic acid  (EXP,ISO)
formaldehyde  (ISO)
fulvestrant  (ISO)
furan  (EXP,ISO)
galactose  (ISO)
gallic acid  (ISO)
genistein  (ISO)
hydrogen peroxide  (ISO)
irinotecan  (ISO)
L-methionine  (EXP)
lipopolysaccharide  (ISO)
lithium atom  (ISO)
lithium chloride  (ISO)
lithium hydride  (ISO)
melatonin  (ISO)
mercaptopurine  (ISO)
methanol  (EXP)
methapyrilene  (ISO)
mitomycin C  (ISO)
monuron  (ISO)
N-ethyl-N-nitrosourea  (EXP)
N-methyl-4-phenylpyridinium  (ISO)
NAD zwitterion  (EXP)
NAD(+)  (EXP)
NMN zwitterion  (EXP)
ochratoxin A  (EXP)
p-chloromercuribenzoic acid  (ISO)
paracetamol  (ISO)
paraquat  (ISO)
Pentoxifylline  (ISO)
propanal  (ISO)
propranolol  (EXP)
purine-6-thiol  (ISO)
quercetin  (ISO)
resveratrol  (EXP,ISO)
rifampicin  (ISO)
rotenone  (EXP)
SB 431542  (ISO)
sevoflurane  (ISO)
sodium arsenite  (EXP,ISO)
sodium fluoride  (EXP)
sulforaphane  (EXP)
tamoxifen  (ISO)
titanium dioxide  (ISO)
tributyl phosphate  (EXP)
zinc atom  (ISO)
zinc(0)  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process
bone growth  (IDA,IMP)
bone resorption  (IDA,IMP)
cellular response to amino acid stimulus  (IDA)
cellular response to hypoxia  (ISO)
cellular response to leukemia inhibitory factor  (IEP)
cellular response to tumor necrosis factor  (ISO)
DNA damage response  (ISO)
miRNA-mediated post-transcriptional gene silencing  (IDA,IMP,ISO)
myelination  (IDA)
negative regulation of angiogenesis  (ISO)
negative regulation of B cell receptor signaling pathway  (ISO)
negative regulation of calcium ion import  (ISO)
negative regulation of chemokine production  (ISO)
negative regulation of gene expression  (IDA)
negative regulation of intracellular signal transduction  (ISO)
negative regulation of IP-10 production  (ISO)
negative regulation of peroxisome proliferator activated receptor signaling pathway  (ISO)
negative regulation of protein serine/threonine kinase activity  (ISO)
negative regulation of smooth muscle cell chemotaxis  (ISO)
negative regulation of sprouting angiogenesis  (ISO)
negative regulation of transmembrane transport  (ISO)
negative regulation of vascular associated smooth muscle cell migration  (ISO)
negative regulation of vascular associated smooth muscle cell proliferation  (ISO)
negative regulation of vascular endothelial cell proliferation  (ISO)
negative regulation of vascular endothelial growth factor production  (ISO)
negative regulation of vascular wound healing  (ISO)
ossification  (IDA)
osteoclast development  (IDA,IMP)
positive regulation of blood vessel endothelial cell differentiation  (ISO)
positive regulation of cardiac muscle cell apoptotic process  (ISO)
positive regulation of cellular senescence  (ISO)
positive regulation of gene expression  (ISO)
positive regulation of leukocyte apoptotic process  (ISO)
positive regulation of lipid storage  (ISO)
positive regulation of protein acetylation  (ISO)
positive regulation of smooth muscle cell differentiation  (ISO)
positive regulation of stem cell differentiation  (IMP)
programmed cell death in response to reactive oxygen species  (ISO)
response to oxygen levels  (IDA)
sensory perception of sound  (IEP)
tumor necrosis factor-mediated signaling pathway  (ISO)

Cellular Component

Molecular Function

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
abnormal cell physiology  (IAGP)
abnormal efferent ductules of testis morphology  (IAGP)
abnormal gait  (IAGP)
abnormal immune system cell morphology  (IAGP)
abnormal locomotor coordination  (IAGP)
abnormal motor neuron morphology  (IAGP)
abnormal neuronal precursor proliferation  (IAGP)
abnormal oviduct epithelium motile cilium morphology  (IAGP)
abnormal oviduct physiology  (IAGP)
abnormal oviduct transport  (IAGP)
abnormal respiratory epithelium physiology  (IAGP)
abnormal seminiferous tubule morphology  (IAGP)
abnormal skeleton development  (IAGP)
blepharoptosis  (IAGP)
decreased body weight  (IAGP)
decreased grip strength  (IAGP)
decreased locomotor activity  (IAGP)
decreased prepulse inhibition  (IAGP)
decreased pulmonary respiratory rate  (IAGP)
decreased pulmonary ventilation  (IAGP)
decreased respiratory motile cilia number  (IAGP)
decreased startle reflex  (IAGP)
decreased thermal nociceptive threshold  (IAGP)
female infertility  (IAGP)
hunched posture  (IAGP)
hypoalgesia  (IAGP)
increased B cell number  (IAGP)
increased bone mass  (IAGP)
increased incidence of tumors by chemical induction  (IAGP)
increased medulloblastoma incidence  (IAGP)
increased osteoblast cell number  (IAGP)
increased susceptibility to bacterial infection induced morbidity/mortality  (IAGP)
increased vertical activity  (IAGP)
jumpy  (IAGP)
male infertility  (IAGP)
microphthalmia  (IAGP)
nasal inflammation  (IAGP)
no abnormal phenotype detected  (IEA)
oligozoospermia  (IAGP)
postnatal growth retardation  (IAGP)
postnatal lethality, incomplete penetrance  (IAGP)
premature death  (IAGP)
slow postnatal weight gain  (IAGP)
tremors  (IAGP)
References

References - curated
# Reference Title Reference Citation
1. Combined low miR-34s are associated with unfavorable prognosis in children with hepatoblastoma: A Chinese population-based study. Jiao C, etal., J Pediatr Surg. 2016 Aug;51(8):1355-61. doi: 10.1016/j.jpedsurg.2016.02.091. Epub 2016 Mar 14.
2. Protective effects of crocin and zinc sulfate on hepatic ischemia-reperfusion injury in rats: a comparative experimental model study. Mard SA, etal., Biomed Pharmacother. 2017 Dec;96:48-55. doi: 10.1016/j.biopha.2017.09.123. Epub 2017 Nov 24.
3. Mouse MP Annotation Import Pipeline RGD automated import pipeline
4. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
5. Association of Circulating Serum miR-34a and miR-122 with Dyslipidemia among Patients with Non-Alcoholic Fatty Liver Disease. Salvoza NC, etal., PLoS One. 2016 Apr 14;11(4):e0153497. doi: 10.1371/journal.pone.0153497. eCollection 2016.
6. Myocardial infarction-induced microRNA-enriched exosomes contribute to cardiac Nrf2 dysregulation in chronic heart failure. Tian C, etal., Am J Physiol Heart Circ Physiol. 2018 May 1;314(5):H928-H939. doi: 10.1152/ajpheart.00602.2017. Epub 2018 Jan 26.
7. MicroRNA-34a expression levels in serum and intratumoral tissue can predict bone metastasis in patients with hepatocellular carcinoma. Xiang ZL, etal., Oncotarget. 2016 Dec 27;7(52):87246-87256. doi: 10.18632/oncotarget.13531.
8. A small-molecule modulator of the tumor-suppressor miR34a inhibits the growth of hepatocellular carcinoma. Xiao Z, etal., Cancer Res. 2014 Nov 1;74(21):6236-47. doi: 10.1158/0008-5472.CAN-14-0855. Epub 2014 Sep 12.
9. MicroRNA‑34a inhibits liver cancer cell growth by reprogramming glucose metabolism. Zhang HF, etal., Mol Med Rep. 2018 Mar;17(3):4483-4489. doi: 10.3892/mmr.2018.8399. Epub 2018 Jan 9.
10. Elevated circulating microRNA-210 levels in patients with hereditary hemorrhagic telangiectasia and pulmonary arteriovenous malformations: a potential new biomarker. Zhang Q, etal., Biomarkers. 2013 Feb;18(1):23-9. doi: 10.3109/1354750X.2012.728624. Epub 2012 Oct 10.
11. MiR-34a Enhances Chondrocyte Apoptosis, Senescence and Facilitates Development of Osteoarthritis by Targeting DLL1 and Regulating PI3K/AKT Pathway. Zhang W, etal., Cell Physiol Biochem. 2018;48(3):1304-1316. doi: 10.1159/000492090. Epub 2018 Jul 26.
Additional References at PubMed
PMID:12554860   PMID:12919684   PMID:16381832   PMID:16462742   PMID:17369397   PMID:17554337   PMID:17604727   PMID:17875987   PMID:18594913   PMID:18723672   PMID:18835850   PMID:19345099  
PMID:19727952   PMID:19895913   PMID:20090763   PMID:20185821   PMID:20215419   PMID:20413612   PMID:20439489   PMID:20548288   PMID:20558326   PMID:20598588   PMID:20668074   PMID:20689156  
PMID:20805985   PMID:21037258   PMID:21067520   PMID:21267068   PMID:21423204   PMID:21553024   PMID:21690328   PMID:21718763   PMID:21822254   PMID:21831840   PMID:21857907   PMID:21931765  
PMID:22020437   PMID:22064828   PMID:22102825   PMID:22115756   PMID:22160687   PMID:22160706   PMID:22297810   PMID:22367207   PMID:22436728   PMID:22483937   PMID:22561871   PMID:22564414  
PMID:22701667   PMID:22841474   PMID:22844244   PMID:22988100   PMID:23029150   PMID:23047694   PMID:23239859   PMID:23426265   PMID:23462268   PMID:23646144   PMID:23778113   PMID:23796712  
PMID:23834033   PMID:24129179   PMID:24147106   PMID:24401748   PMID:24421386   PMID:24532687   PMID:24587330   PMID:24630988   PMID:24642471   PMID:24752729   PMID:24759152   PMID:24780820  
PMID:24829923   PMID:24899310   PMID:24967703   PMID:24973144   PMID:25078608   PMID:25107369   PMID:25123309   PMID:25182532   PMID:25322725   PMID:25348795   PMID:25400756   PMID:25489229  
PMID:25526086   PMID:25638533   PMID:25751060   PMID:26082557   PMID:26100857   PMID:26126715   PMID:26282218   PMID:26330104   PMID:26406385   PMID:26438731   PMID:26459758   PMID:26493107  
PMID:26572867   PMID:26577528   PMID:26661155   PMID:26718338   PMID:26802970   PMID:26833183   PMID:26849305   PMID:26871287   PMID:26902416   PMID:26902620   PMID:26935288   PMID:26949937  
PMID:27026110   PMID:27297797   PMID:27635790   PMID:27707753   PMID:27789474   PMID:27979858   PMID:28082412   PMID:28185128   PMID:28199987   PMID:28250026   PMID:28263817   PMID:28273432  
PMID:28303901   PMID:28321785   PMID:28363996   PMID:28485501   PMID:28533191   PMID:28639625   PMID:28668331   PMID:28817812   PMID:28923932   PMID:28981097   PMID:29079808   PMID:29128099  
PMID:29162670   PMID:29175286   PMID:29187903   PMID:29289683   PMID:29378298   PMID:29417477   PMID:29424794   PMID:29523084   PMID:29637443   PMID:29700282   PMID:29704100   PMID:29764990  
PMID:29957876   PMID:30026277   PMID:30030567   PMID:30042416   PMID:30093634   PMID:30365981   PMID:30543324   PMID:30659149   PMID:30667374   PMID:30770339   PMID:30793480   PMID:30853453  
PMID:30867288   PMID:30872089   PMID:30898698   PMID:30922079   PMID:30930169   PMID:31026620   PMID:31139863   PMID:31247197   PMID:31294899   PMID:31295467   PMID:31296380   PMID:31308031  
PMID:31376385   PMID:31482401   PMID:31487267   PMID:31604677   PMID:32056304   PMID:32057178   PMID:32094435   PMID:32178735   PMID:32507765   PMID:32541781   PMID:32581023   PMID:32585876  
PMID:32630813   PMID:32903604   PMID:32929850   PMID:33034147   PMID:33098868   PMID:33289184   PMID:33400820   PMID:33581076   PMID:33775690   PMID:33787491   PMID:33930596   PMID:33937961  
PMID:33942341   PMID:34405380   PMID:34520170   PMID:34953890   PMID:35020601   PMID:35286917   PMID:35330685   PMID:35475886   PMID:35568745   PMID:35879917   PMID:35887096   PMID:36010657  
PMID:36058294   PMID:36147476   PMID:36231079   PMID:36414112   PMID:36496404   PMID:36537660   PMID:36583714   PMID:36611960   PMID:36615779   PMID:36642095   PMID:36808381   PMID:36831485  
PMID:36882858   PMID:36988541   PMID:37013480   PMID:37026704   PMID:37414399   PMID:37561715   PMID:37960269   PMID:38289520  


Genomics

Comparative Map Data
Mir34a
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm394150,152,911 - 150,153,012 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl4150,152,911 - 150,153,012 (+)EnsemblGRCm39 Ensembl
GRCm384150,068,454 - 150,068,555 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl4150,068,454 - 150,068,555 (+)EnsemblGRCm38mm10GRCm38
MGSCv374149,442,563 - 149,442,664 (+)NCBIGRCm37MGSCv37mm9NCBIm37
Celera4152,344,303 - 152,344,404 (+)NCBICelera
Cytogenetic Map4E2NCBI
cM Map480.85NCBI
MIR34A
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh3819,151,668 - 9,151,777 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl19,151,668 - 9,151,777 (-)EnsemblGRCh38hg38GRCh38
GRCh3719,211,727 - 9,211,836 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 3619,134,313 - 9,134,422 (-)NCBINCBI36Build 36hg18NCBI36
Celera18,321,161 - 8,321,270 (-)NCBICelera
Cytogenetic Map1p36.22NCBI
HuRef18,362,551 - 8,362,660 (-)NCBIHuRef
CHM1_119,201,981 - 9,202,090 (-)NCBICHM1_1
T2T-CHM13v2.018,685,973 - 8,686,082 (-)NCBIT2T-CHM13v2.0
Mir34a
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr85165,815,952 - 165,816,053 (+)NCBIGRCr8
mRatBN7.25160,533,002 - 160,533,103 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl5160,533,002 - 160,533,103 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx5163,249,485 - 163,249,586 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.05165,071,851 - 165,071,952 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.05165,028,223 - 165,028,324 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.05167,092,491 - 167,092,592 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl5167,092,491 - 167,092,592 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.05170,733,242 - 170,733,343 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Celera5158,795,110 - 158,795,211 (+)NCBICelera
Cytogenetic Map5q36NCBI
MIR34A
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1562,485,832 - 62,485,897 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl562,485,832 - 62,485,897 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha562,502,877 - 62,502,942 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0562,712,027 - 62,712,092 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl562,712,027 - 62,712,092 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1562,710,061 - 62,710,126 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0562,573,923 - 62,573,988 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0562,978,341 - 62,978,406 (-)NCBIUU_Cfam_GSD_1.0

miRNA Target Status

Predicted Targets
Summary Value
Count of predictions:28608
Count of gene targets:11803
Count of transcripts:20688
Interacting mature miRNAs:mmu-miR-34a-3p, mmu-miR-34a-5p
Prediction methods:Microtar, Miranda, Pita, Pita,Targetscan, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1301267Bcmd2_mB cell maturation defect 2 (mouse)Not determined4133154678150789451Mouse
4142077Ignpq2_mIgA nephropathy QTL 2 (mouse)Not determined4133676733156860686Mouse
4141180Ssic1_msusceptibility to small intestinal cancer 1 (mouse)Not determined120674005154674151Mouse
1301584Lrdg2_mlight induced retinal degeneration 2 (mouse)Not determined4129465811151654550Mouse
4142139Adip12_madiposity 12 (mouse)Not determined4124621281156860686Mouse
1302102Bis1_mbeta-carboline-induced seizures 1 (mouse)Not determined4119864433153864536Mouse
10043996Gct5_mgranulosa cell tumorigenesis 5 (mouse)Not determined4127784226156860686Mouse
1301525Lmb1_mlupus in MRL and B6 F2 cross (mouse)Not determined4124264957150676858Mouse
26884445Sklq7_mskull length QTL 7, 10 week (mouse)468018237150884457Mouse
14746982Manh56_mmandible shape 56 (mouse)4117815917151815917Mouse
10043985Stheal12_msoft tissue heal 12 (mouse)Not determined4121342649155342753Mouse
1301982Pltiq1_mphospholipid transfer protein inducibility QTL 1 (mouse)Not determined4124621281156860686Mouse
26884437Sklq13_mskull length QTL 13, 16 week (mouse)457700000155684457Mouse
1300803Sluc6_msusceptibility to lung cancer 6 (mouse)Not determined4120674005154674151Mouse
4142061Chlq16_mcirculating hormone level QTL 16 (mouse)Not determined4121342649155342753Mouse
1300933Cdcs9_mcytokine deficiency colitis susceptibility 9 (mouse)Not determined4125230872156860686Mouse
1300874Gasa2_mgastritis type A susceptibility locus 2 (mouse)Not determined4133010494156860686Mouse
1300553Athsq1_matherosclerosis susceptibility QTL 1 (mouse)Not determined4137617848151654550Mouse
1300621Tpnr1_mthermal pain response 1 (mouse)Not determined4125230872156860686Mouse
1301964Bw8q2_mbody weight at 8 weeks QTL 2 (mouse)Not determined4119864433153864536Mouse
1301452Elsgp1_melevated serum gp70 1 (mouse)Not determined4121342649155342753Mouse
11567249Elorr3_methanol induced loss of righting response 3 (mouse)43722677156268235Mouse
4142493Femwf13_mfemur work to failure 13 (mouse)Not determined116154678150154782Mouse
1301815Sles2_msystemic lupus erythmatosus suppressor 2 (mouse)Not determined494957579150676858Mouse
1301108Scon2_msucrose consumption 2 (mouse)Not determined4134654451156860686Mouse
1300858Tafat_mtally ho associated mesenteric fat pad weight (mouse)Not determined4124621281156860686Mouse
1300537Ap3q_malcohol preference 3 QTL (mouse)Not determined4134654451156860686Mouse
1301823Bmd7_mbone mineral density 7 (mouse)Not determined488982069151654550Mouse
10412210Cypr6_mcytokine production 6 (mouse)Not determined4120617848154617995Mouse
1302078Sluc21_msusceptibility to lung cancer 21 (mouse)Not determined4117401141151401275Mouse
10045620Heal22_mwound healing/regeneration 22 (mouse)Not determined4125230872156860686Mouse
4142481Gct1_mgranulosa cell tumorigenesis 1 (mouse)Not determined4127784226156860686Mouse
10755531Lymph3_mlymphocyte differential 3 (mouse)4124553483156860686Mouse
11533916Mts1_mmammary tumor susceptibility 1 (mouse)4125289325156860686Mouse
13503348Bntq18_mbone traits QTL 18 (mouse)4120617848154617995Mouse
4141184Tb2r1_mTGF-beta2 responsiveness 1 (mouse)Not determined137674005150676858Mouse
1300780Cocrb16_mcocaine related behavior 16 (mouse)Not determined4138943725156860686Mouse


Sequence


Ensembl Acc Id: ENSMUST00000083559
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl4150,152,911 - 150,153,012 (+)Ensembl
GRCm38.p6 Ensembl4150,068,454 - 150,068,555 (+)Ensembl
RefSeq Acc Id: NR_029751
RefSeq Status: PROVISIONAL
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm394150,152,911 - 150,153,012 (+)NCBI
GRCm384150,068,454 - 150,068,555 (+)ENTREZGENE
MGSCv374149,442,563 - 149,442,664 (+)RGD
Celera4152,344,303 - 152,344,404 (+)RGD
cM Map4 ENTREZGENE
Sequence:
Promoters
RGD ID:6885592
Promoter ID:EPDNEW_M6247
Type:single initiation site
Name:Mir34a_1
Description:Mus musculus microRNA 34a , microRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm384150,068,540 - 150,068,600EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:3619363 AgrOrtholog
Ensembl Genes ENSMUSG00000065493 Ensembl, ENTREZGENE
Ensembl Transcript ENSMUST00000083559 ENTREZGENE
MGD MGI:3619363 ENTREZGENE
miRBase MI0000584 ENTREZGENE
NCBI Gene 723848 ENTREZGENE
PhenoGen Mir34a PhenoGen
RNAcentral URS000030BD69 RNACentral
  URS00005E520A RNACentral
  URS000075E272 RNACentral