Mir324 (microRNA 324) - Rat Genome Database

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Gene: Mir324 (microRNA 324) Mus musculus
Analyze
Symbol: Mir324
Name: microRNA 324
RGD ID: 1608160
MGI Page MGI
Description: Acts upstream of or within several processes, including cellular response to leukemia inhibitory factor; long-term synaptic potentiation; and regulation of gene expression. Part of RISC complex. Is expressed in dorsal root ganglion; glossopharyngeal ganglion; lung; trigeminal ganglion; and vibrissa. Orthologous to human MIR324 (microRNA 324).
Type: ncrna (Ensembl: miRNA)
RefSeq Status: PROVISIONAL
Previously known as: mir-3; mir-324; Mirn; Mirn324; mmu-mir-3; mmu-mir-324
RGD Orthologs
Human
Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391169,902,869 - 69,902,957 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1169,902,869 - 69,902,957 (+)EnsemblGRCm39 Ensembl
GRCm381170,012,043 - 70,012,131 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1170,012,043 - 70,012,131 (+)EnsemblGRCm38mm10GRCm38
MGSCv371169,825,545 - 69,825,633 (+)NCBIGRCm37MGSCv37mm9NCBIm37
Celera1177,559,995 - 77,560,083 (+)NCBICelera
Cytogenetic Map11B3NCBI
cM Map1142.96NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component
RISC complex  (IDA)

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
References

References - curated
# Reference Title Reference Citation
1. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
2. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:14691248   PMID:15538371   PMID:16381832   PMID:17369397   PMID:17604727   PMID:18282110   PMID:18452032   PMID:19559694   PMID:20215419   PMID:20413612   PMID:20439489   PMID:21037258  
PMID:21267068   PMID:21643937   PMID:23185045   PMID:23646144   PMID:24882011   PMID:24906954   PMID:25858512   PMID:27681419   PMID:30193893   PMID:30760705   PMID:31212067   PMID:31568785  
PMID:31733402   PMID:32385917   PMID:32387677   PMID:34001919   PMID:34632544   PMID:35563683   PMID:37036350   PMID:37773316   PMID:38063103   PMID:38082035  


Genomics

Comparative Map Data
Mir324
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391169,902,869 - 69,902,957 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1169,902,869 - 69,902,957 (+)EnsemblGRCm39 Ensembl
GRCm381170,012,043 - 70,012,131 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1170,012,043 - 70,012,131 (+)EnsemblGRCm38mm10GRCm38
MGSCv371169,825,545 - 69,825,633 (+)NCBIGRCm37MGSCv37mm9NCBIm37
Celera1177,559,995 - 77,560,083 (+)NCBICelera
Cytogenetic Map11B3NCBI
cM Map1142.96NCBI
MIR324
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38177,223,297 - 7,223,379 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl177,223,297 - 7,223,379 (-)EnsemblGRCh38hg38GRCh38
GRCh37177,126,616 - 7,126,698 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36177,067,339 - 7,067,421 (-)NCBINCBI36Build 36hg18NCBI36
Celera177,151,250 - 7,151,332 (-)NCBICelera
Cytogenetic Map17p13.1NCBI
HuRef177,018,606 - 7,018,688 (-)NCBIHuRef
CHM1_1177,135,364 - 7,135,446 (-)NCBICHM1_1
T2T-CHM13v2.0177,124,208 - 7,124,290 (-)NCBIT2T-CHM13v2.0
Mir324
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81055,233,363 - 55,233,445 (+)NCBIGRCr8
mRatBN7.21054,734,680 - 54,734,762 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1054,734,678 - 54,734,766 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1059,396,826 - 59,396,908 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01058,885,406 - 58,885,488 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01054,392,696 - 54,392,778 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01056,621,126 - 56,621,208 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1056,621,124 - 56,621,212 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01056,366,245 - 56,366,327 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Celera1053,888,264 - 53,888,346 (+)NCBICelera
Cytogenetic Map10q24NCBI

miRNA Target Status

Predicted Targets
Summary Value
Count of predictions:21019
Count of gene targets:9616
Count of transcripts:16296
Interacting mature miRNAs:mmu-miR-324-3p, mmu-miR-324-5p
Prediction methods:Microtar, Miranda, Pita, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
27226783Tibl5_mtibia length 5, 5 week (mouse)1168190826101890826Mouse
1300628Lgth6_mbody length 6 (mouse)Not determined1166733420100733652Mouse
4141367Inf1_macute ozone induced inflammation (mouse)Not determined44630038113058009Mouse
4141875Etax9_methanol induced ataxia 9 (mouse)Not determined5528498572209927Mouse
1300765Bbaa4_mB.burgdorferi-associated arthritis 4 (mouse)Not determined114618516780185262Mouse
1301788Lbw8_mlupus NZB x NZW 8 (mouse)Not determined113650328770509492Mouse
1302021Nidd1n_mnon-insulin-dependent diabetes mellitus 1 in NSY (mouse)Not determined114516587379978324Mouse
4142121Tmc1m2_mTmc1 modifier 2 (mouse)Not determined1156864027114157957Mouse
1301896Tria1_mT-cell receptor induced activation 1 (mouse)Not determined113661356570613855Mouse
4141982Skts-fp2_mskin tumor susceptibility in FVB and PWK 2 (mouse)Not determined5871926685066529Mouse
4141853Skmw17_mskeletal muscle weight 17 (mouse)Not determined113708094171081064Mouse
1357878Mastr_mmodifier of astrocytoma (mouse)Not determined114570858189818733Mouse
1300784Prdt3_mprion disease incubation time 3 (mouse)Not determined1166733420100733652Mouse
11039501Ltpr6a_mLeishmania tropica response 6a (mouse)116483033698830473Mouse
13208559Wght10_mweight 10 (mouse)11395000088890826Mouse
13524840Ppiq9a_mprepulse inhibition QTL 9a (mouse)115249438586494385Mouse
11039502Ltpr6b_mLeishmania tropica response 6b (mouse)116483033698830473Mouse
36049792Ars5_mantibody response to SARS-CoV 5, day 7, IgM (mouse)116899082672490826Mouse
13208558Lgth12_mbody length 12 (mouse)11395000094890826Mouse
1300664Etohcta9_methanol conditioned taste aversion 9 (mouse)Not determined115775466091754758Mouse
10053682Eae45_mexperimental allergic encephalomyelitis susceptibility 45 (mouse)Not determined115849055574754758Mouse
1300924Ity2_mimmunity to S. typhimurium 2 (mouse)Not determined15850803087695238Mouse
13208569Bmiq10_mbody mass index QTL 10 (mouse)113589082784890826Mouse
11039515Ltpr6_mLeishmania tropica response 6 (mouse)116483033698830473Mouse
11532699Sluc36b_msusceptibility to lung cancer 36b (mouse)114225661776256730Mouse
11532698Sluc36a_msusceptibility to lung cancer 36a (mouse)114225661776256730Mouse
1300774Pgia7_mproteoglycan induced arthritis 7 (mouse)Not determined115339058887390737Mouse
4141830Pregq1_mpregnancy QTL 1 (mouse)Not determined115412675283733652Mouse
1301546Pcir2_mperiosteal circumference 2 (mouse)Not determined1166733420100733652Mouse
1300905Scc6_mcolon tumor susceptibility 6 (mouse)Not determined11688027789019734Mouse
35673314Ari2_mantibody response to influenza 2, day 10, IgG3 (mouse)116899082672490826Mouse
39128214Lwq20_mliver weight QTL 20 (mouse)1112268637118022724Mouse
1301328Mol4_mmodifier of LPS-response 4 (mouse)Not determined113628257783481356Mouse
10412246Dfs2_mdental fluorosis suseptibility 2 (mouse)Not determined112180736495881231Mouse
1357766Si5lq6_mserum IGFBP-5 level QTL 6 (mouse)Not determined1166733420100733652Mouse
4142316Ity2b_mimmunity to S. typhimurium 2b (mouse)Not determined116707819179813912Mouse
1301319Dautb4_mdopamine uptake transporter binding 4 (mouse)Not determined116215600596156153Mouse
36049778Ars6_mantibody response to SARS-CoV 6, day 15, IgM (mouse)116899082672490826Mouse
1301830Ssta4_msusceptibility to Salmonella typhimurium antigens 4 (mouse)Not determined115007819184078411Mouse
36049779Ars7_mantibody response to SARS-CoV 7, day 29, IgG1 (mouse)116899082672490826Mouse
36049790Ars3_mantibody response to SARS-CoV 3, day 7, IgG2b (mouse)116899082672490826Mouse
36049791Ars4_mantibody response to SARS-CoV 4, day 7, IgG3 (mouse)116899082672490826Mouse
1301833Tbbmd5_mtotal body bone mineral density 5 (mouse)Not determined1166733420100733652Mouse
36049788Ars1_mantibody response to SARS-CoV 1, day 7, IgG1 (mouse)116899082672490826Mouse
36049789Ars2_mantibody response to SARS-CoV 2, day 7, IgG2a+IgG2c (mouse)116899082672490826Mouse
36049786Ars10_mantibody response to SARS-CoV 10, 4 days post-rechallenge, IgG2a+IgG2c (mouse)116899082672490826Mouse
10766457Nwa3_mNew Zealand White autoimmunity 3 (mouse)113801611572016209Mouse
36049787Ars11_mantibody response to SARS-CoV 11, 4 days post-rechallenge, IgM (mouse)116899082672490826Mouse
36049784Ars8_mantibody response to SARS-CoV 8, day 29, IgG2a+IgG2c (mouse)116899082672490826Mouse
36049785Ars9_mantibody response to SARS-CoV 9, day 29, IgM (mouse)116899082672490826Mouse
4142300Ctrq3_mC. trachomatis resistance QTL 3 (mouse)Not determined114463003876854757Mouse
4141012Femwf6_mfemur work to failure 6 (mouse)Not determined66733420100733652Mouse
1301987Pid3_mprior incubation determinant 3 (mouse)Not determined116168682088699728Mouse
27226730Tibmd1_mtibia midshaft diameter 1, 5 week (mouse)1162590826109390826Mouse
1301988Bmd11_mbone mineral density 11 (mouse)Not determined114631940780319522Mouse
4141894Nidd6k_mNidd6 on KK-A (mouse)Not determined1912420496897826Mouse
1301999Lmr15_mleishmaniasis resistance 15 (mouse)Not determined116331940781830473Mouse
10044004Stzid3_mstreptozotocin induced diabetes susceptibility 3 (mouse)Not determined116331940794063918Mouse
26884453Sklq16_mskull length QTL 16, 16 week (mouse)11325000072690826Mouse


Sequence


Ensembl Acc Id: ENSMUST00000083600
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1169,902,869 - 69,902,957 (+)Ensembl
GRCm38.p6 Ensembl1170,012,043 - 70,012,131 (+)Ensembl
RefSeq Acc Id: NR_029758
RefSeq Status: PROVISIONAL
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391169,902,869 - 69,902,957 (+)NCBI
GRCm381170,012,043 - 70,012,131 (+)ENTREZGENE
MGSCv371169,825,545 - 69,825,633 (+)RGD
Celera1177,559,995 - 77,560,083 (+)RGD
cM Map11 ENTREZGENE
Sequence:

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:3619335 AgrOrtholog
Ensembl Genes ENSMUSG00000065534 Ensembl, ENTREZGENE
Ensembl Transcript ENSMUST00000083600 ENTREZGENE
MGD MGI:3619335 ENTREZGENE
miRBase MI0000595 ENTREZGENE
NCBI Gene 723896 ENTREZGENE
PhenoGen Mir324 PhenoGen
RNAcentral URS000005481D RNACentral
  URS000041DFB1 RNACentral
  URS000075BACC RNACentral