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Gene: NCMAP (non-compact myelin associated protein) Homo sapiens

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Symbol:

NCMAP

Name:

non-compact myelin associated protein

RGD ID:

1606072

HGNC Page

HGNC:29332

Description:

Predicted to be a structural constituent of myelin sheath. Predicted to be involved in peripheral nervous system myelin formation and positive regulation of myelination. Predicted to be located in plasma membrane. Predicted to be active in Schmidt-Lanterman incisure and paranode region of axon.

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

C1orf130; FLJ42528; MP11; myelin glycoprotein 11; myelin protein of 11 kDa; noncompact myelin-associated protein; uncharacterized protein C1orf130

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Allele / Splice:

See ClinVar data

Latest Assembly:

GRCh38 - Human Genome Assembly GRCh38

Position:

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	1	24,556,087 - 24,609,328 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	1	24,556,087 - 24,609,328 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	1	24,882,578 - 24,935,819 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	1	24,755,189 - 24,808,403 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Celera	1	23,249,057 - 23,262,966 (+)	NCBI		Celera
Cytogenetic Map	1	p36.11	NCBI
HuRef	1	23,137,966 - 23,192,211 (+)	NCBI		HuRef
CHM1_1	1	24,995,150 - 25,048,739 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	1	24,394,472 - 24,447,710 (+)	NCBI		T2T-CHM13v2.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

(1->4)-beta-D-glucan (ISO)

1,4-dioxane (ISO)

1-naphthyl isothiocyanate (ISO)

2,3,7,8-tetrachlorodibenzodioxine (ISO)

4-hydroxyphenyl retinamide (ISO)

7,12-dimethyltetraphene (ISO)

alpha-Zearalanol (ISO)

atrazine (EXP)

benzo[a]pyrene (EXP)

benzo[b]fluoranthene (ISO)

bisphenol A (ISO)

carbon nanotube (ISO)

chlorpyrifos (ISO)

dimethylarsinic acid (ISO)

genistein (EXP)

methylarsonic acid (ISO)

mifepristone (EXP)

paracetamol (EXP)

perfluorooctane-1-sulfonic acid (ISO)

perfluorooctanoic acid (ISO)

pregnenolone 16alpha-carbonitrile (ISO)

progesterone (EXP,ISO)

resveratrol (EXP)

sodium arsenate (ISO)

sodium arsenite (ISO)

trichloroethene (ISO)

tris(2-butoxyethyl) phosphate (EXP)

urethane (EXP)

zearalenone (EXP)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

peripheral nervous system myelin formation (IBA,IEA,ISS)

positive regulation of myelination (IEA,ISS)

regulation of myelination (IEA)

Cellular Component

paranode region of axon (IBA,IEA,ISS)

plasma membrane (IEA,ISS)

Schmidt-Lanterman incisure (IBA,IEA,ISS)

Molecular Function

structural constituent of myelin sheath (IBA,IEA,ISS)

References

References - curated

#	Reference Title	Reference Citation
1.	ClinVar Automated Import and Annotation Pipeline	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
2.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

Additional References at PubMed

PMID:12477932	PMID:15489334	PMID:16710414	PMID:18650334	PMID:21873635

Genomics

Comparative Map Data

NCMAP
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	1	24,556,087 - 24,609,328 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	1	24,556,087 - 24,609,328 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	1	24,882,578 - 24,935,819 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	1	24,755,189 - 24,808,403 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Celera	1	23,249,057 - 23,262,966 (+)	NCBI		Celera
Cytogenetic Map	1	p36.11	NCBI
HuRef	1	23,137,966 - 23,192,211 (+)	NCBI		HuRef
CHM1_1	1	24,995,150 - 25,048,739 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	1	24,394,472 - 24,447,710 (+)	NCBI		T2T-CHM13v2.0

Ncmap
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	4	135,096,887 - 135,125,551 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	4	135,096,887 - 135,125,538 (-)	Ensembl		GRCm39 Ensembl
GRCm38	4	135,369,576 - 135,398,240 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	4	135,369,576 - 135,398,227 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	4	134,925,492 - 134,954,142 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	4	134,641,986 - 134,670,297 (-)	NCBI		MGSCv36	mm8
Celera	4	133,570,079 - 133,598,716 (-)	NCBI		Celera
Cytogenetic Map	4	D3	NCBI
cM Map	4	67.47	NCBI

Ncmap
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	5	152,893,173 - 152,921,175 (-)	NCBI		GRCr8
mRatBN7.2	5	147,608,042 - 147,623,266 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	5	147,610,677 - 147,618,775 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	5	150,311,975 - 150,320,078 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	5	152,083,387 - 152,091,518 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	5	152,068,255 - 152,076,358 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	5	153,729,250 - 153,737,161 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	5	153,729,250 - 153,737,161 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	5	157,500,153 - 157,507,291 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	5	154,163,766 - 154,167,138 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
Celera	5	146,020,607 - 146,028,744 (-)	NCBI		Celera
Cytogenetic Map	5	q36	NCBI

Ncmap
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955452	4,334,590 - 4,374,388 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955452	4,335,411 - 4,380,972 (+)	NCBI	ChiLan1.0	ChiLan1.0

NCMAP
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	1	202,321,973 - 202,335,505 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	1	201,426,763 - 201,438,999 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	1	23,759,047 - 23,809,495 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	1	24,738,804 - 24,789,114 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	1	24,777,120 - 24,790,383 (+)	Ensembl	panpan1.1		panPan2

NCMAP
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	2	75,070,862 - 75,083,652 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
Dog10K_Boxer_Tasha	2	71,644,434 - 71,667,975 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	2	75,632,444 - 75,650,352 (-)	NCBI		ROS_Cfam_1.0
UMICH_Zoey_3.1	2	72,455,021 - 72,478,559 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	2	73,462,109 - 73,479,979 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	2	74,466,440 - 74,484,344 (-)	NCBI		UU_Cfam_GSD_1.0

Ncmap
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405058	43,674,796 - 43,714,079 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936474	9,507,150 - 9,539,543 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936474	9,507,203 - 9,538,969 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

NCMAP
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	6	82,186,368 - 82,281,641 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	6	82,242,371 - 82,283,887 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	6	75,941,369 - 75,980,795 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

NCMAP
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	20	108,087,270 - 108,129,490 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	20	108,092,406 - 108,100,358 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666033	8,220,151 - 8,271,279 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Ncmap
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624764	8,947,155 - 8,983,717 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624764	8,947,138 - 8,983,740 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in NCMAP
7 total Variants

Clinical Variants

Name	Type	Condition(s)	Position(s)	Clinical significance
NM_001010980.4(NCMAP):c.-7-585C>A	single nucleotide variant	Lung cancer [RCV000090789]	Chr1:24594839 [GRCh38] Chr1:24921330 [GRCh37] Chr1:1p36.11	uncertain significance
GRCh38/hg38 1p36.11-34.2(chr1:24381206-41401517)x3	copy number gain	See cases [RCV000138891]	Chr1:24381206..41401517 [GRCh38] Chr1:24707696..41886350 [GRCh37] Chr1:24580283..41658937 [NCBI36] Chr1:1p36.11-34.2	pathogenic
GRCh37/hg19 1p36.12-12(chr1:20608823-120546301)x3	copy number loss	not provided [RCV000762767]	Chr1:20608823..120546301 [GRCh37] Chr1:1p36.12-12	likely benign
GRCh37/hg19 1p36.33-q44(chr1:849467-249224684)x3	copy number gain	See cases [RCV000510383]	Chr1:849467..249224684 [GRCh37] Chr1:1p36.33-q44	pathogenic
GRCh37/hg19 1p36.33-q44(chr1:849467-249224684)	copy number gain	See cases [RCV000510926]	Chr1:849467..249224684 [GRCh37] Chr1:1p36.33-q44	pathogenic
GRCh37/hg19 1p36.33-q44(chr1:47851-249228449)x3	copy number gain	not provided [RCV000736295]	Chr1:47851..249228449 [GRCh37] Chr1:1p36.33-q44	pathogenic
GRCh37/hg19 1p36.33-q44(chr1:82154-249218992)x3	copy number gain	not provided [RCV000736305]	Chr1:82154..249218992 [GRCh37] Chr1:1p36.33-q44	pathogenic
GRCh37/hg19 1p36.11(chr1:24898453-24962376)x3	copy number gain	not provided [RCV000736446]	Chr1:24898453..24962376 [GRCh37] Chr1:1p36.11	benign
GRCh37/hg19 1p36.22-21.1(chr1:103343285-103455144)x3	copy number gain	Global developmental delay [RCV000787285]	Chr1:103343285..103455144 [GRCh37] Chr1:1p36.22-21.1	uncertain significance
GRCh37/hg19 1p36.11(chr1:24394811-25148686)x3	copy number gain	See cases [RCV001194547]	Chr1:24394811..25148686 [GRCh37] Chr1:1p36.11	uncertain significance
NM_001010980.5(NCMAP):c.247G>A (p.Gly83Ser)	single nucleotide variant	not specified [RCV004190591]	Chr1:24605685 [GRCh38] Chr1:24932176 [GRCh37] Chr1:1p36.11	likely benign
GRCh37/hg19 1p36.11(chr1:24680971-25029622)x1	copy number loss	not provided [RCV003483094]	Chr1:24680971..25029622 [GRCh37] Chr1:1p36.11	uncertain significance
GRCh38/hg38 1p36.33-35.1(chr1:99125-34026935)x3	copy number gain	Trisomy 12p [RCV003447845]	Chr1:99125..34026935 [GRCh38] Chr1:1p36.33-35.1	pathogenic
NM_001010980.5(NCMAP):c.209A>G (p.Lys70Arg)	single nucleotide variant	not specified [RCV004468777]	Chr1:24605647 [GRCh38] Chr1:24932138 [GRCh37] Chr1:1p36.11	uncertain significance
NM_001010980.5(NCMAP):c.32C>A (p.Thr11Asn)	single nucleotide variant	not specified [RCV004468785]	Chr1:24595462 [GRCh38] Chr1:24921953 [GRCh37] Chr1:1p36.11	uncertain significance
NM_001010980.5(NCMAP):c.11C>T (p.Ala4Val)	single nucleotide variant	not specified [RCV004468774]	Chr1:24595441 [GRCh38] Chr1:24921932 [GRCh37] Chr1:1p36.11	uncertain significance
NM_001010980.5(NCMAP):c.242G>A (p.Ser81Asn)	single nucleotide variant	not specified [RCV004468780]	Chr1:24605680 [GRCh38] Chr1:24932171 [GRCh37] Chr1:1p36.11	likely benign

miRNA Target Status

Predicted Target Of

	Summary Value
Count of predictions:	1695
Count of miRNA genes:	915
Interacting mature miRNAs:	1084
Transcripts:	ENST00000374392, ENST00000486262
Prediction methods:	Microtar, Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCh38)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
1298451	OSTEAR17_H	Osteoarthritis QTL 17 (human)	2.4	0.0004	Joint/bone inflammation	osteoarthritis	11	1	25188105	Human
1576329	MYI9_H	Myocardial infarction susceptibility QTL 9 (human)	12		Myocardial infarction susceptibility	early-onset	1	7585503	33585503	Human
406913250	GWAS562226_H	unipolar depression, bipolar disorder, schizophrenia, sex interaction measurement QTL GWAS562226 (human)		0.00001	unipolar depression, bipolar disorder, schizophrenia, sex interaction measurement		1	24573039	24573040	Human
596973891	GWAS1093410_H	bipolar disorder, schizophrenia, sex interaction measurement, major depressive disorder QTL GWAS1093410 (human)		0.00001	bipolar disorder, schizophrenia, sex interaction measurement, major depressive disorder		1	24573039	24573040	Human
1298463	BP9_H	Blood pressure QTL 9 (human)	3.9		Blood pressure	hypertension susceptibility	1	1	25188105	Human
1576325	MYI1_H	Myocardial infarction susceptibility QTL 1 (human)	11.68	1e-12	Myocardial infarction susceptibility	early-onset	1	7585503	33585503	Human
1643380	BW316_H	Body weight QTL 316 (human)	2.62	0.0002	Body weight	BMI	1	7585503	33585503	Human

Markers in Region

D15S1390

Human Assembly	Chr	Position (strand)	Source
Cytogenetic Map	19	q13.33	UniSTS
Cytogenetic Map	10	q26.3	UniSTS
Cytogenetic Map	7	q34	UniSTS
Cytogenetic Map	17	q21.33	UniSTS
Cytogenetic Map	18	q11.2	UniSTS
Cytogenetic Map	16	p11.2	UniSTS
Cytogenetic Map	8	p11.22	UniSTS
Cytogenetic Map	10	q23.2	UniSTS
Cytogenetic Map	15	q21	UniSTS
Cytogenetic Map	6	p25	UniSTS
Cytogenetic Map	1	q21.3	UniSTS
Cytogenetic Map	8	q24.22	UniSTS
Cytogenetic Map	6	p23	UniSTS
Cytogenetic Map	12	q13.3	UniSTS
Cytogenetic Map	1	q32.1	UniSTS
Cytogenetic Map	5	q31	UniSTS
Cytogenetic Map	16	q24.1	UniSTS
Cytogenetic Map	20	p13	UniSTS
Cytogenetic Map	7	q22	UniSTS
Cytogenetic Map	1	p34.2	UniSTS
Cytogenetic Map	11	q23.3	UniSTS
Cytogenetic Map	12	q22	UniSTS
Cytogenetic Map	18	q12.1	UniSTS
Cytogenetic Map	19	p13.11	UniSTS
Cytogenetic Map	10	q24.32	UniSTS
Cytogenetic Map	4	q26	UniSTS
Cytogenetic Map	6	p21.1	UniSTS
Cytogenetic Map	11	q12-q13	UniSTS
Cytogenetic Map	14	q32.3	UniSTS
Cytogenetic Map	1	p36.11	UniSTS
Cytogenetic Map	7	q32.1	UniSTS
Cytogenetic Map	19	p13.1	UniSTS
Cytogenetic Map	7	p13-p12	UniSTS
Cytogenetic Map	10	q25.2	UniSTS
Cytogenetic Map	3	p14.1	UniSTS
Cytogenetic Map	8	q22.1	UniSTS
Cytogenetic Map	4	q21.1	UniSTS
Cytogenetic Map	12	q13.12	UniSTS
Cytogenetic Map	1	q21.2	UniSTS
Cytogenetic Map	19	q13	UniSTS
Cytogenetic Map	7	q21.3	UniSTS
Cytogenetic Map	17	q21	UniSTS
Cytogenetic Map	18	q21.3	UniSTS
Cytogenetic Map	22	q13.33	UniSTS
Cytogenetic Map	1	q25.2	UniSTS
Cytogenetic Map	12	q13	UniSTS
Cytogenetic Map	1	p32	UniSTS
Cytogenetic Map	15	q23	UniSTS
Cytogenetic Map	14	q21.3	UniSTS
Cytogenetic Map	8	p23.1	UniSTS
Cytogenetic Map	10	q24.2	UniSTS
Cytogenetic Map	7	p13	UniSTS

D10S275

Human Assembly	Chr	Position (strand)	Source
Cytogenetic Map	21	q21.3	UniSTS
Cytogenetic Map	17	q24.2	UniSTS
Cytogenetic Map	1	q32.1	UniSTS
Cytogenetic Map	13	q12.13	UniSTS
Cytogenetic Map	5	q31.2	UniSTS
Cytogenetic Map	10	q11.22	UniSTS
Cytogenetic Map	22	q13.33	UniSTS
Cytogenetic Map	2	p25.1	UniSTS
Cytogenetic Map	4	q12	UniSTS
Cytogenetic Map	19	p13.12	UniSTS
Cytogenetic Map	7	p13	UniSTS
Cytogenetic Map	2	q11.2	UniSTS
Cytogenetic Map	17	q25.1	UniSTS
Cytogenetic Map	8	q24.13	UniSTS
Cytogenetic Map	19	q13.12	UniSTS
Cytogenetic Map	16	q22.2	UniSTS
Cytogenetic Map	16	q11.2	UniSTS
Cytogenetic Map	14	q24.3	UniSTS
Cytogenetic Map	6	q22	UniSTS
Cytogenetic Map	2	q33.1	UniSTS
Cytogenetic Map	20	q11	UniSTS
Cytogenetic Map	5	q31.1	UniSTS
Cytogenetic Map	4	q32.3	UniSTS
Cytogenetic Map	3	p22.1	UniSTS
Cytogenetic Map	1	p35.2	UniSTS
Cytogenetic Map	19	q13.3	UniSTS
Cytogenetic Map	14	q24	UniSTS
Cytogenetic Map	14	q22-q24	UniSTS
Cytogenetic Map	1	p21.2	UniSTS
Cytogenetic Map	12	q24.31	UniSTS
Cytogenetic Map	14	q11.2	UniSTS
Cytogenetic Map	20	q13.31	UniSTS
Cytogenetic Map	19	p13.3	UniSTS
Cytogenetic Map	5	q35.3	UniSTS
Cytogenetic Map	1	p36.13	UniSTS
Cytogenetic Map	4	q35.1	UniSTS
Cytogenetic Map	X	p11.3	UniSTS
Cytogenetic Map	16	q24	UniSTS
Cytogenetic Map	16	p13.3	UniSTS
Cytogenetic Map	16	q12.1	UniSTS
Cytogenetic Map	1	p36.1	UniSTS
Cytogenetic Map	22	q12.3	UniSTS
Cytogenetic Map	6	p21.33	UniSTS
Cytogenetic Map	10	p11	UniSTS
Cytogenetic Map	1	p13.1	UniSTS
Cytogenetic Map	7	q22.1	UniSTS
Cytogenetic Map	19	q13.32	UniSTS
Cytogenetic Map	7	p22.2	UniSTS
Cytogenetic Map	X	q22.1	UniSTS
Cytogenetic Map	16	q21	UniSTS
Cytogenetic Map	1	p36.31	UniSTS
Cytogenetic Map	3	q12.3	UniSTS
Cytogenetic Map	6	q24	UniSTS
Cytogenetic Map	3	p21.31	UniSTS
Cytogenetic Map	9	q13-q21	UniSTS
Cytogenetic Map	3	p25	UniSTS
Cytogenetic Map	6	p21.3	UniSTS
Cytogenetic Map	7	q22.3	UniSTS
Cytogenetic Map	9	q22	UniSTS
Cytogenetic Map	12	q13.3	UniSTS
Cytogenetic Map	1	q21-q23	UniSTS
Cytogenetic Map	5	q23.3	UniSTS
Cytogenetic Map	20	q13	UniSTS
Cytogenetic Map	1	p35.1	UniSTS
Cytogenetic Map	1	p32.3	UniSTS
Cytogenetic Map	21	q22.13	UniSTS
Cytogenetic Map	19	q13.2	UniSTS
Cytogenetic Map	19	q13.43	UniSTS
Cytogenetic Map	22	q13.2	UniSTS
Cytogenetic Map	X	p22.2-p22.1	UniSTS
Cytogenetic Map	7	q11.23	UniSTS
Cytogenetic Map	10	q26.13	UniSTS
Cytogenetic Map	2	q33.2	UniSTS
Cytogenetic Map	8	q24.3	UniSTS
Cytogenetic Map	20	pter-q11.23	UniSTS
Cytogenetic Map	4	p16.3	UniSTS
Cytogenetic Map	10	p12.1	UniSTS
Cytogenetic Map	10	p12.3	UniSTS
Cytogenetic Map	12	p13.3	UniSTS
Cytogenetic Map	3	q27	UniSTS
Cytogenetic Map	17	p13.2	UniSTS
Cytogenetic Map	1	p34.2	UniSTS
Cytogenetic Map	21	q22.3	UniSTS
Cytogenetic Map	2	q14.3	UniSTS
Cytogenetic Map	3	p14.1	UniSTS
Cytogenetic Map	3	q26.3	UniSTS
Cytogenetic Map	1	q21.3	UniSTS
Cytogenetic Map	14	q32.31	UniSTS
Cytogenetic Map	17	q22	UniSTS
Cytogenetic Map	2	p16.1	UniSTS
Cytogenetic Map	3	q27.1	UniSTS
Cytogenetic Map	22	q13	UniSTS
Cytogenetic Map	11	q22.3	UniSTS
Cytogenetic Map	9	q21.13	UniSTS
Cytogenetic Map	16	p11.2	UniSTS
Cytogenetic Map	10	q24.31	UniSTS
Cytogenetic Map	9	q22.31	UniSTS
Cytogenetic Map	15	q21	UniSTS
Cytogenetic Map	17	p13.1	UniSTS
Cytogenetic Map	15	q25.2	UniSTS
Cytogenetic Map	12	p12	UniSTS
Cytogenetic Map	3	q13.31	UniSTS
Cytogenetic Map	5	q23.2	UniSTS
Cytogenetic Map	22	q11.2	UniSTS
Cytogenetic Map	1	q24-q25.3	UniSTS
Cytogenetic Map	7	p11	UniSTS
Cytogenetic Map	2	q32.1	UniSTS
Cytogenetic Map	17	q23.3	UniSTS
Cytogenetic Map	X	q13-q21	UniSTS
Cytogenetic Map	6	p24.3	UniSTS
Cytogenetic Map	11	p15.4	UniSTS
Cytogenetic Map	1	q21.2-q21.3	UniSTS
Cytogenetic Map	6	q25.2-q27	UniSTS
Cytogenetic Map	11	q23	UniSTS
Cytogenetic Map	9	q34	UniSTS
Cytogenetic Map	12	q24.32	UniSTS
Cytogenetic Map	X	q13.1	UniSTS
Cytogenetic Map	10	q11.21	UniSTS
Cytogenetic Map	14	q32.3	UniSTS
Cytogenetic Map	13	q12-q14	UniSTS
Cytogenetic Map	X	p11.23	UniSTS
Cytogenetic Map	22	q11.21	UniSTS
Cytogenetic Map	1	p36.11	UniSTS
Cytogenetic Map	2	p11.2	UniSTS
Cytogenetic Map	1	q21.2	UniSTS
Cytogenetic Map	14	q23.1	UniSTS
Cytogenetic Map	20	q13.3	UniSTS
Cytogenetic Map	2	q24.1	UniSTS
Cytogenetic Map	10	q25.3	UniSTS
Cytogenetic Map	14	q31	UniSTS
Cytogenetic Map	15	q25.1	UniSTS
Cytogenetic Map	15	q26.1	UniSTS
Cytogenetic Map	8	p21.1	UniSTS
Cytogenetic Map	2	p15	UniSTS
Cytogenetic Map	17	q23.2	UniSTS
Cytogenetic Map	11	p14.3	UniSTS
Cytogenetic Map	9	q33.3	UniSTS
Cytogenetic Map	1	p13.3	UniSTS
Cytogenetic Map	4	q13	UniSTS
Cytogenetic Map	X	q12	UniSTS
Cytogenetic Map	3	p25.3	UniSTS
Cytogenetic Map	1	p34.3	UniSTS
Cytogenetic Map	19	q13.42	UniSTS
Cytogenetic Map	16	q24.3	UniSTS
Cytogenetic Map	X	p11.4	UniSTS
Cytogenetic Map	7	q34	UniSTS
Cytogenetic Map	2	p25.3	UniSTS
Cytogenetic Map	1	q41	UniSTS
Cytogenetic Map	5	q14.1	UniSTS
Cytogenetic Map	15	q15.2	UniSTS
Cytogenetic Map	12	p11.21	UniSTS
Cytogenetic Map	5	p13.1	UniSTS
Cytogenetic Map	7	q31.3	UniSTS
Cytogenetic Map	2	q35	UniSTS
Cytogenetic Map	16	q23.1	UniSTS
Cytogenetic Map	12	q13.13	UniSTS
Cytogenetic Map	1	p21	UniSTS
Cytogenetic Map	X	q24	UniSTS
Cytogenetic Map	7	p14.2	UniSTS
Cytogenetic Map	6	q24.3	UniSTS
Cytogenetic Map	22	q13.31	UniSTS
Cytogenetic Map	9	p24.3	UniSTS
Cytogenetic Map	6	q12-q13	UniSTS
Cytogenetic Map	19	q13	UniSTS
Cytogenetic Map	9	q31-q33	UniSTS
Cytogenetic Map	9	q34.1	UniSTS
Cytogenetic Map	17	p11.2	UniSTS
Cytogenetic Map	14	q32	UniSTS
Cytogenetic Map	3	p14.3	UniSTS
Cytogenetic Map	8	p11.21	UniSTS
Cytogenetic Map	16	p12.3	UniSTS
Cytogenetic Map	9	q31.3	UniSTS
Cytogenetic Map	9	p13.2	UniSTS
Cytogenetic Map	5	q13.2	UniSTS
Cytogenetic Map	18	q23	UniSTS
Cytogenetic Map	8	p22	UniSTS
Cytogenetic Map	17	p13	UniSTS
Cytogenetic Map	19	p12	UniSTS
Cytogenetic Map	8	p21.2	UniSTS
Cytogenetic Map	12	q13.11	UniSTS
Cytogenetic Map	1	q32.3	UniSTS
Cytogenetic Map	1	p33	UniSTS
Cytogenetic Map	19	q13.31	UniSTS
Cytogenetic Map	6	p21	UniSTS
Cytogenetic Map	17	q21.31	UniSTS
Cytogenetic Map	3	p22.2	UniSTS
Cytogenetic Map	17	q12	UniSTS
Cytogenetic Map	X	p21.1	UniSTS
Cytogenetic Map	12	q13	UniSTS
Cytogenetic Map	11	q13.2	UniSTS
Cytogenetic Map	11	p15.1	UniSTS
Cytogenetic Map	1	q43	UniSTS
Cytogenetic Map	19	p13.2	UniSTS
Cytogenetic Map	15	q21.2	UniSTS
Cytogenetic Map	9	q22.2	UniSTS
Cytogenetic Map	X	p22	UniSTS
Cytogenetic Map	13	q14	UniSTS
Cytogenetic Map	3	p21.3	UniSTS
Cytogenetic Map	7	q22	UniSTS
Cytogenetic Map	2	p22	UniSTS
Cytogenetic Map	11	q13.1	UniSTS
Cytogenetic Map	3	p25.2	UniSTS
Cytogenetic Map	14	q22.3	UniSTS
Cytogenetic Map	2	p14	UniSTS

GDB:631813

Human Assembly	Chr	Position (strand)	Source
Cytogenetic Map	1	p36.32	UniSTS
Cytogenetic Map	14	q32.3	UniSTS
Cytogenetic Map	9	p13.3-p12	UniSTS
Cytogenetic Map	20	q13.12	UniSTS
Cytogenetic Map	17	q12	UniSTS
Cytogenetic Map	1	p36.13	UniSTS
Cytogenetic Map	8	p11.21	UniSTS
Cytogenetic Map	2	q33-q34	UniSTS
Cytogenetic Map	14	q24.3	UniSTS
Cytogenetic Map	7	q22.1	UniSTS
Cytogenetic Map	19	p13.11	UniSTS
Cytogenetic Map	2	q31.1	UniSTS
Cytogenetic Map	3	q13.31	UniSTS
Cytogenetic Map	16	p11.2	UniSTS
Cytogenetic Map	19	p13.2	UniSTS
Cytogenetic Map	3	p25.3	UniSTS
Cytogenetic Map	11	q13	UniSTS
Cytogenetic Map	19	p12	UniSTS
Cytogenetic Map	17	p13.3	UniSTS
Cytogenetic Map	11	p12	UniSTS
Cytogenetic Map	17	q21.1	UniSTS
Cytogenetic Map	5	q11.2-q13.1	UniSTS
Cytogenetic Map	6	p24.3	UniSTS
Cytogenetic Map	22	q13.2	UniSTS
Cytogenetic Map	3	q26.33	UniSTS
Cytogenetic Map	19	q13.4	UniSTS
Cytogenetic Map	7	p22	UniSTS
Cytogenetic Map	9	q32	UniSTS
Cytogenetic Map	17	q11.2	UniSTS
Cytogenetic Map	20	p13	UniSTS
Cytogenetic Map	18	q12.1	UniSTS
Cytogenetic Map	15	q24.2	UniSTS
Cytogenetic Map	1	p35.3	UniSTS
Cytogenetic Map	3	p14.3	UniSTS
Cytogenetic Map	7	p15.3	UniSTS
Cytogenetic Map	1	p32	UniSTS
Cytogenetic Map	5	q13	UniSTS
Cytogenetic Map	3	q13.33	UniSTS
Cytogenetic Map	1	p13.2	UniSTS
Cytogenetic Map	X	p22.3	UniSTS
Cytogenetic Map	1	p36.11	UniSTS
Cytogenetic Map	18	q22.3	UniSTS
Cytogenetic Map	16	p12.1	UniSTS
Cytogenetic Map	19	q13.41	UniSTS
Cytogenetic Map	8	p21.1	UniSTS
Cytogenetic Map	14	q23.1	UniSTS
Cytogenetic Map	1	q32.1	UniSTS
Cytogenetic Map	2	q23.3	UniSTS
Cytogenetic Map	19	q13.12	UniSTS
Cytogenetic Map	11	p15.5	UniSTS
Cytogenetic Map	19	q13.42	UniSTS
Cytogenetic Map	X	q25	UniSTS
Cytogenetic Map	10	q24.2	UniSTS
Cytogenetic Map	8	q22.1	UniSTS
Cytogenetic Map	3	p21.33	UniSTS
Cytogenetic Map	12	q24.33	UniSTS
Cytogenetic Map	10	q21.3	UniSTS
Cytogenetic Map	15	q13.2	UniSTS
Cytogenetic Map	13	q12.11	UniSTS
Cytogenetic Map	2	p23.1	UniSTS
Cytogenetic Map	6	q21	UniSTS
Cytogenetic Map	16	q22.2	UniSTS
Cytogenetic Map	6	p21.31	UniSTS
Cytogenetic Map	16	p13.3	UniSTS
Cytogenetic Map	4	q28.1	UniSTS
Cytogenetic Map	19	q13.2	UniSTS
Cytogenetic Map	17	p13.2	UniSTS
Cytogenetic Map	3	p24.3	UniSTS
Cytogenetic Map	19	q13.11	UniSTS
Cytogenetic Map	12	q24.31	UniSTS
Cytogenetic Map	19	q13.3	UniSTS
Cytogenetic Map	11	q13.2	UniSTS
Cytogenetic Map	19	q13.33	UniSTS
Cytogenetic Map	17	q21.32	UniSTS
Cytogenetic Map	1	q25	UniSTS
Cytogenetic Map	20	q11.22	UniSTS
Cytogenetic Map	15	q13.3	UniSTS
Cytogenetic Map	11	p15.1	UniSTS
Cytogenetic Map	5	p15.3	UniSTS
Cytogenetic Map	13	q14	UniSTS
Cytogenetic Map	5	q33.1	UniSTS
Cytogenetic Map	19	q	UniSTS
Cytogenetic Map	13	q14.13	UniSTS
Cytogenetic Map	17	q21.31	UniSTS
Cytogenetic Map	2	q33.1	UniSTS
Cytogenetic Map	17	q23.2	UniSTS
Cytogenetic Map	14	q22.3	UniSTS
Cytogenetic Map	19	p13.3	UniSTS

D22S275

Human Assembly	Chr	Position (strand)	Source
Cytogenetic Map	1	p36.11	UniSTS
Marshfield Genetic Map	22	28.57	UniSTS
Genethon Genetic Map	22	23.2	UniSTS

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

adipose tissue	alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	entire extraembryonic component	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	musculoskeletal system	nervous system	pharyngeal arch	renal system	reproductive system	respiratory system	sensory system	visual system
1117	2296	2549	2043	4752	1657	2309	4	617	1293	458	2167	6090	5422	37	3613	1	815	1647	1581	173	1

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001010980	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_005245872	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_011541463	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_054336573	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_054336574	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AK124519	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AL445686	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC050474	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC127785	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC147014	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC147015	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CB961010	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH471134	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CP068277	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENST00000374392 ⟹ ENSP00000363513

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	1	24,556,087 - 24,609,328 (+)	Ensembl

Ensembl Acc Id:

ENST00000486262

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	1	24,589,464 - 24,609,328 (+)	Ensembl

RefSeq Acc Id:

NM_001010980 ⟹ NP_001010980

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38	1	24,556,087 - 24,609,328 (+)	NCBI
GRCh37	1	24,882,567 - 24,935,819 (+)	NCBI
Build 36	1	24,755,189 - 24,808,403 (+)	NCBI Archive
Celera	1	23,249,057 - 23,262,966 (+)	RGD
HuRef	1	23,137,966 - 23,192,211 (+)	NCBI
CHM1_1	1	24,995,150 - 25,048,739 (+)	NCBI
T2T-CHM13v2.0	1	24,394,472 - 24,447,710 (+)	NCBI

Sequence:

show sequence

GTGGCAGCGCCGGGCGGCGGCGGGGACCCTGGCTGGGAGCGCGGCGGTGCCGGCGGGAGGCCGA
GCGGGGCTCGACAGAGCAGGATCGAGATGACCACAGCCACCCCTCTGGGGGATACCACCTTCTT
CTCACTGAACATGACCACCAGGGGAGAAGACTTCCTGTATAAGAGTTCTGGAGCCATTGTTGCT
GCCGTTGTGGTGGTTGTCATCATCATCTTCACCGTGGTTCTGATCCTGCTGAAGATGTACAACA
GGAAAATGAGGACGAGGCGGGAACTAGAGCCCAAGGGCCCCAAGCCAACCGCCCCTTCTGCCGT
GGGCCCAAACAGCAACGGCAGCCAACACCCAGCAACTGTGACCTTCAGTCCTGTTGACGTCCAG
GTGGAGACGCGATGACCTCTACCCTGGCGCTATCTCCACCACTGTCCAAAGAGCCTCTCCAGAG
TCAAGACCCAGAGGCACACTCTCTGGCAGCTTCACAATGAGCTTCTTCTGGTCAGGTCGACAGA
GACATCTTTGACGCAATCTCTGATGCTTCCAGCAATCCTCAACCTTGTCTGCCCTGCCCTACCC
CAACTGTGTCCACATCCCTGCCGCCACCCCACCAAAAAGCTGCAGAACATTCTTTTGTCATCTG
ATGAGGTAGAGCTATGTTGGGAATCCACCAATGTGGGCTTGGCTTTCCCCCACACTGTAGTTAG
ACAGATAGACAGATAGCCCAGGAGCCAGGTGTCAGGGAGCACTGCTGAGAGTATCACAATAGGA
TCTGTCACGGGGTTCATATCAGATGAAGCGCCGTATCCACTGCTTCACAGAGCAAAACATTCAA
TCCCATAACCAGGCACAGGGGAACTAACTTGGACTAACTAACCAGAAAACCTTGTTAACGTATA
ACTTGTTCCAGTACTACATCTCTGCCTGCTGGCTCATGACAATTGCTCAGCACATTTTCCCCTC
TTGAAGAAAGGTTGCAAGAAGAACTAAATTATCCTCAAAAGATTTCTGCTTCATTAGTAAAGAG
TCAGTGATGGAATAGGGTGACTCTGCAGAATAGTGGCCTCTAGGGTAGGAGCTTGTTGTGTTGT
CCGTGGGCCTGGAATGATCCTGGTGGCTGATCAGGGTCCTTCTCCCACTCTGGGCTGTATCAAC
CCTGACGGTCTTGGTCTTTGGCTCCCCTTTATCTGGATTCTGAGCACGCTGACTGTCCTGTTAA
TGCCTTCCCTCCAAGGACCAGTATTTGGAGATTAATTAGATTACAACTCTATCTATGTTACCTT
TGTCCTTCCTGGTCACCTTGCAGATTCAAGACATGTTCAAAGCAACACATTCACAACCCATTTC
TATTCTATAGCAACCTCGTCTGTGACTCCTTAGCCTGGAGAACAATCTACCAAGAAGAGAAAGT
ATCTGGAATTAAGAAGTCCTACCATCCAAGCCCTACTTCCTGGTTGTGTGGCCTTGGAAAAGTG
ACTCAACCTCTTTATATTCAGTTTCCTAACCATGAAGTGGAAATGATAACACCTGCCTCATTGG
GGCACTATAACAAGTGAAGGACTTAGGAAAACATCTGGAGTATAGCGCCTGGCACCCAGGAGAT
GCTTAATAAATGGGAACCAGGATTCTTTTTCTTTTCTTTTTTCTTTTCTTTTTTTTTTTTTTTT
GAGACAGAGCCTCAATCTGTCACCTGGGCTGGAGTGCAGTGGCACGCTCACAGCTCGCTGCAGC
CTTGAACTCCTGGGCTCAAGGGATGCTCCCTCCTCAGCCTCCAGAGTAGCTGGGACTACAGGTA
TGTGTCACCTCACCAGGCTAATTTTTTTATTTTTTATTTTTGTAGAGATGGGGTCTCGCTGTGT
TGCCCAGGCTGGTCTTGAACCCCTGGCCTCAAGTGATCCTTCTGCTTTGGCCTCCCAAAGTGCT
GGGATTACAGGCATGGACTATGGTGCCCAGCCTAGGAGCCAACATTATTATTATTATAGGCTTT
TTTTTCAATTGCAAGATAGACATTTCTTCACATTTTAATGATTCTGAAATCAGAACATATCTTG
CAATTGATGGGTTCATTAATATAATTGTAGTTCTTTACTTCCTCTCAAAAACTTGTGATCTTAT
AATTGATGGCATCTTGGAAACAAGGTAATAAATCTCTATTCTGTTAAAGAAAGTGACACACTTT
GACATTTAACCTCAAATTTTAGGAGTCTCTCCCTCTTGGGGTCAGAAATCCCTTCTGAGGCCAG
GTGTCGTGGCTCATGCCTGTAATCCCAGCACTTTGGGAGGCTGAGGCAGGCGGGTCACTTGAGG
TCAGGAGTTTGAGACCAGCCTGGCCAACATGGCAAAACCCTGTCTCTACTAATAATACAAAATT
TAGCTGGGCATGGTGGCATGCACCTGTAATCCCACTACTAGGGAGGCTGTGGCATGAGAATCAC
TTGAACCTGGAAGGCAGAGGTTGCAGTGAGCCAAGATCGTGCCACTGCACTCCAGCCTGGGCAA
CAGAGTGAAACTGCATCTCAAAAAAAGAAAAATCCATTATGAGGGGAAATCAAGAGTCAGGGAG
GTAAGAGGTCTTACCCAGGGTCACACAGCTCATGATATCCCACTGTAAAAATACTCTGTGGAAT
AGCTCTGGAGAAATACTGGCACATTCTTCCTCTCTGGTCATTATTTCTTCCTACTGTGTTTAAA
TATCCACCAAGTGTCAAGGACTTTGTAAGATGCTTTCACATAAATTATCTCATAGGATTAAATT
TTCCCAAAAACCTGGGGAGGAATTATTTTTTCCAAAACAGATGATAATTTCTGATTCAAAGAGA
AAGAAAACAAAGTACTTTTCCAAAGTCACACAGCTAGTAAGTCACAAAGACAAGACTCAAAACC
AGGTCTCTTGACTCCAAAGTCTGTCTTTTTTGTGAAGTCACACTCCTCTGCTGGCCCAGCTCAA
AGCAGCACAGATTCTTTATGGGCTGAACAAGGGGAGTACGGGTTTGTCCATGTGTTTGAGTAGA
GATCAGGGTTCTGGCTTCCAGGCTGAAGGTGAGGGAAAAGCCACTTCTAACTCCTTTGGGCATC
CATGCTCACGGCCAAAAGAGCCCCTTCTCAACACATCCAAGTGCTAAGGATTCCTGCTTCATTC
AAGCTACTACTTAGGCCCAAGGAGCAAGGGGTAGAATGGCATCTAACCAGAGCAAAGCCATTTC
TTTGAGGGCTCAAGCCATAAACAAATATGCTCCCCTAAACATATTCGGCTTGAAAAAGTTGTTT
TGGGGCAGCTGTGGTGGTGCACCCCTGTAATCCCAGCCCTTTGGGAGTCAGAGGCAGTCAGTCA
CTTGAGCCCAGGAGTTCAAGACTAGCCTGGGCAACACGGCGAAACCTCGTCTCTACAAAAAATA
CAAAAATTAACCAAGCGTGGTAGTGCACGCCTGTATTCCCAGCTACTTGGGAGGCTGAGGTAGG
AGGATGGCTTGAGCCTGGGAGGCAGAGGTTGCAGTGAGCTGAGATCGCGCCACTGCACTCCAGC
CGGGGTGACAGAGCCAGACCCTGTCTCAAAGCATATTTCAACCCTAAAACTAGACTCTTCTGCC
CACAGTGCAGTCTTCTAAGGGTTACCCTCTGGTATATGTTCTTTTGCTAAATGAAGGCTTGGAG
TTGGAGGGAAGAAGGGGAGATGGAGTGGTGAGGGCGAGTCAAATAAAAGGATTTGAGTGTCTCG
TTTTTGACTAATGAAGATGATTCAATAAACATCCTGTAAGAAGGGTTCCTATGTGCAAGTTGAG
GTGCTACTAAGTACATTAAGACACAATTGCTGCTCTCAAGGAGTTAGCAGCTGGTCTCATGCAG
GGATCTCACCACGTGGTTATGTATTTTGTTTCTGATGAGGTGCCTTTCTTAGCAGATGCTGCCT
TATTTGGCCACTGAAACAATCAAAGCTAATAAATGCTTAAAGAAAAATATCTGACAATAAAAAG
GTTTAAATCAAA

hide sequence

RefSeq Acc Id:

XM_005245872 ⟹ XP_005245929

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38	1	24,589,450 - 24,609,328 (+)	NCBI
GRCh37	1	24,882,567 - 24,935,819 (+)	NCBI

Sequence:

show sequence

CACCTCAGCCTCCCGAGTAGCTATCATTACAGGTTCACATCACCACACCTGGCCTTAGGGTCAA
TTTTCTGACCATTAAAACATCCCAATATCTCCAGGAGCTGCTTGGGAGTAGTGAGCCACTTGTC
TGTGGAGGAGATCAAGTCCTGCTGAATCTCCCATCCCTCAGGAGATTGGGAGAAATCAATCCCA
ATGTTTTGGTGGGTCGAGGGCTTTCGTGGGTTACCTGCTCTGAGTTACAGGTGGTCAATTGAGG
AGAGGTCTGCCGGGGTTGGTAGTCTCTCTATTGTCTTATCCAGGGAGGAACTTGTAAGCCAGGC
CAGAGGGAGAGGGGGTACCCCTAGGGCAGAGCTTCAGGGGAGATATTTTGGACAGGTGGGAGTC
TGACAGCGTTTATCTTCCACATTCAGCTCTTAGACTTGGCCAAGAGCTAGTCAGAGAAGGATGG
ATCCGTGAATAAATGGTTATGACCTGCCATCACTTCCCAAACTCGCCTCCCACACAGGCCTTTG
TAAACAACCCAAGAAAACAACAGTCCCTTGTAGATTCTGTAAATGTGATCGAGGCTCTGCTGAA
CACAGAGGCTCAGAGTGTGGCCAAGGGCAGGAGTAGTTGGGTAGGAGTCAGGGTCAGGGTCATA
GGCCTGGGGCAAGGGCCCTCGTCTGTCTGCTGAACCCTGGCCTGTGTGGGTTTTTTCATCAAAG
CCCCACATTGATTTGGGCCCTGGATGCTGGGCCACCTGTGCTTTGTGGATTTGCTGGGAGGGTT
TTTGAAGAAGGGGCTGTGAAATCGGATAGACCCTGGTTTGAATCCTGGCATGGTTGGCATAGTT
TTCATATTAGCCTTGTGAAGTTAAGGCAGTTTCTTCTCTGCTCCAAGCCTCAGATTCCTCATCT
TCAGAATGGACAAAGTGCCTGTGCCCTCCTTACAGGACTGGTATGAAGATTAAGTGAGATCTCC
AACATAAAGCACCGAGTGCGGTGCCGGACACATAGCGCATTATTATTATTATTAAATTAACCTC
TGTCAGTGAAGACTGGCCTCCCTCTCCCTGTCCTCTTTGTGTTTTCTATGGTCATGGCCCCTGG
TCTTAGGGACGTTTGATACTGAAGTGCTCCTGCTGGCCCTCACTTGGTTAACAACTGTTGCTGG
GGCCCCACACATGAAAACACCCACATGCTTGGCCATGGCTGTGCTACCACCCTCCCTCCCACCT
TCTCTGATGCAGCAGGGACAGAGATGCAATTGAGAGCCCTCAGTCCCGAGATGAGGCAAGATAT
GCTCTGAGATTCCTCACTGTTCTCTGAGAGAGAAGAGCTACTGGGCCCATCCAAAAGACAGTCT
GCACCTGGAACTCGGCACCCAGGAGGTCACCCCTGCAGGACCTGTAGAGGAGCCTGTGTCCTGG
TGGCCTTAGGTGGCTGCATTACTGGATCGAGATGACCACAGCCACCCCTCTGGGGGATACCACC
TTCTTCTCACTGAACATGACCACCAGGGGAGAAGACTTCCTGTATAAGAGTTCTGGAGCCATTG
TTGCTGCCGTTGTGGTGGTTGTCATCATCATCTTCACCGTGGTTCTGATCCTGCTGAAGATGTA
CAACAGGAAAATGAGGACGAGGCGGGAACTAGAGCCCAAGGGCCCCAAGCCAACCGCCCCTTCT
GCCGTGGGCCCAAACAGCAACGGCAGCCAACACCCAGCAACTGTGACCTTCAGTCCTGTTGACG
TCCAGGTGGAGACGCGATGACCTCTACCCTGGCGCTATCTCCACCACTGTCCAAAGAGCCTCTC
CAGAGTCAAGACCCAGAGGCACACTCTCTGGCAGCTTCACAATGAGCTTCTTCTGGTCAGGTCG
ACAGAGACATCTTTGACGCAATCTCTGATGCTTCCAGCAATCCTCAACCTTGTCTGCCCTGCCC
TACCCCAACTGTGTCCACATCCCTGCCGCCACCCCACCAAAAAGCTGCAGAACATTCTTTTGTC
ATCTGATGAGGTAGAGCTATGTTGGGAATCCACCAATGTGGGCTTGGCTTTCCCCCACACTGTA
GTTAGACAGATAGACAGATAGCCCAGGAGCCAGGTGTCAGGGAGCACTGCTGAGAGTATCACAA
TAGGATCTGTCACGGGGTTCATATCAGATGAAGCGCCGTATCCACTGCTTCACAGAGCAAAACA
TTCAATCCCATAACCAGGCACAGGGGAACTAACTTGGACTAACTAACCAGAAAACCTTGTTAAC
GTATAACTTGTTCCAGTACTACATCTCTGCCTGCTGGCTCATGACAATTGCTCAGCACATTTTC
CCCTCTTGAAGAAAGGTTGCAAGAAGAACTAAATTATCCTCAAAAGATTTCTGCTTCATTAGTA
AAGAGTCAGTGATGGAATAGGGTGACTCTGCAGAATAGTGGCCTCTAGGGTAGGAGCTTGTTGT
GTTGTCCGTGGGCCTGGAATGATCCTGGTGGCTGATCAGGGTCCTTCTCCCACTCTGGGCTGTA
TCAACCCTGACGGTCTTGGTCTTTGGCTCCCCTTTATCTGGATTCTGAGCACGCTGACTGTCCT
GTTAATGCCTTCCCTCCAAGGACCAGTATTTGGAGATTAATTAGATTACAACTCTATCTATGTT
ACCTTTGTCCTTCCTGGTCACCTTGCAGATTCAAGACATGTTCAAAGCAACACATTCACAACCC
ATTTCTATTCTATAGCAACCTCGTCTGTGACTCCTTAGCCTGGAGAACAATCTACCAAGAAGAG
AAAGTATCTGGAATTAAGAAGTCCTACCATCCAAGCCCTACTTCCTGGTTGTGTGGCCTTGGAA
AAGTGACTCAACCTCTTTATATTCAGTTTCCTAACCATGAAGTGGAAATGATAACACCTGCCTC
ATTGGGGCACTATAACAAGTGAAGGACTTAGGAAAACATCTGGAGTATAGCGCCTGGCACCCAG
GAGATGCTTAATAAATGGGAACCAGGATTCTTTTTCTTTTCTTTTTTCTTTTCTTTTTTTTTTT
TTTTTGAGACAGAGCCTCAATCTGTCACCTGGGCTGG

hide sequence

RefSeq Acc Id:

XM_011541463 ⟹ XP_011539765

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38	1	24,563,532 - 24,609,328 (+)	NCBI

Sequence:

show sequence

AAAACCTGAGAGAGATGGAGAGTATACGTATGATTCCCAAAAGGAAAGAAAAATAAAAGTGGAG
ATGAGGAAATAAATAATTGACGAAATAATGGAGATTTAAATGTTCCAAAAATGTTTTTTAAATG
AGTACAGATTGAAAGAGCTCATAGAGTAACCAACAGTAGAAAAGAATAAGGAAAAATTCACACA
TAGGTATCAGGGGGAAATTAAGAATATGAAAGACCAGGAAGAAGAGCAGGGAGAAATAACAGAT
GGCGTACAGAGGAACAAGAACTGGGTTGGCATTATTCTTCTCAACAGCAATACCCGATAAAGTC
AAAGAAGTGATGTCACTAGTAATTTAAAAAAAAGAACTCTTTCAATCCAGAATTTTAAAGCCAG
CCAATTTGTCATTCAAACATGAGGTCATAATAAAAATATTCTTAGGCAAATAAAGCCTCAGAAG
GTGGAATACACAAAGACCCACATTGAAAATACTCTTGCAGGAAATAAATAATGAAAGAAATGTT
CAGGAGATCCTGCAAGAACTGTGGGAAGTCAGGCTTCAGTGCAAGAAATAGAAGCAGTATTTGG
CATTTTAGGCAGGAGGGGATTTTATACACCTTTTTTTTTTTTTTTAATGTAGGAAAGGCTAGAG
GCTCCCAAAATACTGCAAAACTGGCCAGACTGGGGAGCTACAGCATCTGCCATAACCAGGAAAG
TGGAGGAATCTCAAGGCTGCCCTGGAGGTTGAAACTGAACTTGACAGGGAACTGTTGAATTCAA
GGACACATACATCCTGGATCCAGGGACCTGGAAGCTGATACACTGTAACTGCCCAGATATTGGA
ACCCAGAGTCTGGGTACCAATGTCACTGCAACACTTGTTCTCTTTTCAACAAGGAGAGAGATCG
AGATGACCACAGCCACCCCTCTGGGGGATACCACCTTCTTCTCACTGAACATGACCACCAGGGG
AGAAGACTTCCTGTATAAGAGTTCTGGAGCCATTGTTGCTGCCGTTGTGGTGGTTGTCATCATC
ATCTTCACCGTGGTTCTGATCCTGCTGAAGATGTACAACAGGAAAATGAGGACGAGGCGGGAAC
TAGAGCCCAAGGGCCCCAAGCCAACCGCCCCTTCTGCCGTGGGCCCAAACAGCAACGGCAGCCA
ACACCCAGCAACTGTGACCTTCAGTCCTGTTGACGTCCAGGTGGAGACGCGATGACCTCTACCC
TGGCGCTATCTCCACCACTGTCCAAAGAGCCTCTCCAGAGTCAAGACCCAGAGGCACACTCTCT
GGCAGCTTCACAATGAGCTTCTTCTGGTCAGGTCGACAGAGACATCTTTGACGCAATCTCTGAT
GCTTCCAGCAATCCTCAACCTTGTCTGCCCTGCCCTACCCCAACTGTGTCCACATCCCTGCCGC
CACCCCACCAAAAAGCTGCAGAACATTCTTTTGTCATCTGATGAGGTAGAGCTATGTTGGGAAT
CCACCAATGTGGGCTTGGCTTTCCCCCACACTGTAGTTAGACAGATAGACAGATAGCCCAGGAG
CCAGGTGTCAGGGAGCACTGCTGAGAGTATCACAATAGGATCTGTCACGGGGTTCATATCAGAT
GAAGCGCCGTATCCACTGCTTCACAGAGCAAAACATTCAATCCCATAACCAGGCACAGGGGAAC
TAACTTGGACTAACTAACCAGAAAACCTTGTTAACGTATAACTTGTTCCAGTACTACATCTCTG
CCTGCTGGCTCATGACAATTGCTCAGCACATTTTCCCCTCTTGAAGAAAGGTTGCAAGAAGAAC
TAAATTATCCTCAAAAGATTTCTGCTTCATTAGTAAAGAGTCAGTGATGGAATAGGGTGACTCT
GCAGAATAGTGGCCTCTAGGGTAGGAGCTTGTTGTGTTGTCCGTGGGCCTGGAATGATCCTGGT
GGCTGATCAGGGTCCTTCTCCCACTCTGGGCTGTATCAACCCTGACGGTCTTGGTCTTTGGCTC
CCCTTTATCTGGATTCTGAGCACGCTGACTGTCCTGTTAATGCCTTCCCTCCAAGGACCAGTAT
TTGGAGATTAATTAGATTACAACTCTATCTATGTTACCTTTGTCCTTCCTGGTCACCTTGCAGA
TTCAAGACATGTTCAAAGCAACACATTCACAACCCATTTCTATTCTATAGCAACCTCGTCTGTG
ACTCCTTAGCCTGGAGAACAATCTACCAAGAAGAGAAAGTATCTGGAATTAAGAAGTCCTACCA
TCCAAGCCCTACTTCCTGGTTGTGTGGCCTTGGAAAAGTGACTCAACCTCTTTATATTCAGTTT
CCTAACCATGAAGTGGAAATGATAACACCTGCCTCATTGGGGCACTATAACAAGTGAAGGACTT
AGGAAAACATCTGGAGTATAGCGCCTGGCACCCAGGAGATGCTTAATAAATGGGAACCAGGATT
CTTTTTCTTTTCTTTTTTCTTTTCTTTTTTTTTTTTTTTTGAGACAGAGCCTCAATCTGTCACC
TGGGCTGG

hide sequence

RefSeq Acc Id:

XM_054336573 ⟹ XP_054192548

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
T2T-CHM13v2.0	1	24,402,920 - 24,447,710 (+)	NCBI

RefSeq Acc Id:

XM_054336574 ⟹ XP_054192549

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
T2T-CHM13v2.0	1	24,427,415 - 24,447,710 (+)	NCBI

Protein Sequences


Protein RefSeqs	NP_001010980	(Get FASTA)	NCBI Sequence Viewer
	XP_005245929	(Get FASTA)	NCBI Sequence Viewer
	XP_011539765	(Get FASTA)	NCBI Sequence Viewer
	XP_054192548	(Get FASTA)	NCBI Sequence Viewer
	XP_054192549	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAI27786	(Get FASTA)	NCBI Sequence Viewer
	AAI47015	(Get FASTA)	NCBI Sequence Viewer
	AAI47016	(Get FASTA)	NCBI Sequence Viewer
	EAW95136	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSP00000363513
	ENSP00000363513.2
GenBank Protein	Q5T1S8	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:	NP_001010980 ⟸ NM_001010980
- UniProtKB:	A0PK04 (UniProtKB/Swiss-Prot), B2RV34 (UniProtKB/Swiss-Prot), Q5T1S8 (UniProtKB/Swiss-Prot)
- Sequence:	show sequence MTTATPLGDTTFFSLNMTTRGEDFLYKSSGAIVAAVVVVVIIIFTVVLILLKMYNRKMRTRREL EPKGPKPTAPSAVGPNSNGSQHPATVTFSPVDVQVETR hide sequence

RefSeq Acc Id:	XP_005245929 ⟸ XM_005245872
- Peptide Label:	isoform X1
- UniProtKB:	A0PK04 (UniProtKB/Swiss-Prot), B2RV34 (UniProtKB/Swiss-Prot), Q5T1S8 (UniProtKB/Swiss-Prot)
- Sequence:	show sequence MTTATPLGDTTFFSLNMTTRGEDFLYKSSGAIVAAVVVVVIIIFTVVLILLKMYNRKMRTRREL EPKGPKPTAPSAVGPNSNGSQHPATVTFSPVDVQVETR hide sequence

RefSeq Acc Id:	XP_011539765 ⟸ XM_011541463
- Peptide Label:	isoform X1
- UniProtKB:	A0PK04 (UniProtKB/Swiss-Prot), B2RV34 (UniProtKB/Swiss-Prot), Q5T1S8 (UniProtKB/Swiss-Prot)
- Sequence:	show sequence MTTATPLGDTTFFSLNMTTRGEDFLYKSSGAIVAAVVVVVIIIFTVVLILLKMYNRKMRTRREL EPKGPKPTAPSAVGPNSNGSQHPATVTFSPVDVQVETR hide sequence

Ensembl Acc Id:

ENSP00000363513 ⟸ ENST00000374392

RefSeq Acc Id:	XP_054192548 ⟸ XM_054336573
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_054192549 ⟸ XM_054336574
- Peptide Label:	isoform X1
- UniProtKB:	B2RV34 (UniProtKB/Swiss-Prot), Q5T1S8 (UniProtKB/Swiss-Prot), A0PK04 (UniProtKB/Swiss-Prot)

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-Q5T1S8-F1-model_v2	AlphaFold	Q5T1S8	1-102	view protein structure

Promoters

RGD ID:

6854536

Promoter ID:

EPDNEW_H433

Type:

initiation region

Name:

NCMAP_1

Description:

non-compact myelin associated protein

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Alternative Promoters:

null; see alsoEPDNEW_H434

Experiment Methods:

Single-end sequencing.

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38	1	24,556,121 - 24,556,181	EPDNEW

RGD ID:

6854538

Promoter ID:

EPDNEW_H434

Type:

initiation region

Name:

NCMAP_2

Description:

non-compact myelin associated protein

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Alternative Promoters:

null; see alsoEPDNEW_H433

Experiment Methods:

Single-end sequencing.

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38	1	24,589,516 - 24,589,576	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	HGNC:29332	AgrOrtholog
COSMIC	NCMAP	COSMIC
Ensembl Genes	ENSG00000184454	Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript	ENST00000374392	ENTREZGENE
	ENST00000374392.3	UniProtKB/Swiss-Prot
	ENST00000486262	ENTREZGENE
GTEx	ENSG00000184454	GTEx
HGNC ID	HGNC:29332	ENTREZGENE
Human Proteome Map	NCMAP	Human Proteome Map
InterPro	NCMAP	UniProtKB/Swiss-Prot
KEGG Report	hsa:400746	UniProtKB/Swiss-Prot
NCBI Gene	400746	ENTREZGENE
PANTHER	NONCOMPACT MYELIN-ASSOCIATED PROTEIN	UniProtKB/Swiss-Prot
	PTHR35974	UniProtKB/Swiss-Prot
PharmGKB	PA142672448	PharmGKB
UniProt	A0PK04	ENTREZGENE
	B2RV34	ENTREZGENE
	NCMAP_HUMAN	UniProtKB/Swiss-Prot, ENTREZGENE
UniProt Secondary	A0PK04	UniProtKB/Swiss-Prot
	B2RV34	UniProtKB/Swiss-Prot

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2015-11-24	NCMAP	non-compact myelin associated protein		noncompact myelin associated protein	Symbol and/or name change	5135510	APPROVED
2012-08-07	NCMAP	noncompact myelin associated protein	C1orf130	chromosome 1 open reading frame 130	Symbol and/or name change	5135510	APPROVED

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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