PAIP2B (poly(A) binding protein interacting protein 2B) - Rat Genome Database

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Gene: PAIP2B (poly(A) binding protein interacting protein 2B) Homo sapiens
Analyze
Symbol: PAIP2B
Name: poly(A) binding protein interacting protein 2B
RGD ID: 1605487
HGNC Page HGNC:29200
Description: Enables mRNA regulatory element binding translation repressor activity. Involved in negative regulation of translational initiation. Predicted to be active in cytoplasm.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: KIAA1155; PABP-interacting protein 2B; PAIP-2B; poly(A)-binding protein-interacting protein 2B; polyadenylate-binding protein-interacting protein 2B
RGD Orthologs
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Allele / Splice: See ClinVar data
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38271,182,738 - 71,227,103 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl271,182,738 - 71,227,103 (-)EnsemblGRCh38hg38GRCh38
GRCh37271,409,868 - 71,454,233 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36271,263,376 - 71,307,741 (-)NCBINCBI36Build 36hg18NCBI36
Celera271,260,574 - 71,304,932 (-)NCBICelera
Cytogenetic Map2p13.3NCBI
HuRef271,146,532 - 71,191,204 (-)NCBIHuRef
CHM1_1271,339,205 - 71,383,545 (-)NCBICHM1_1
T2T-CHM13v2.0271,193,792 - 71,238,156 (-)NCBIT2T-CHM13v2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component
cytoplasm  (IBA,IC)

Molecular Function

Phenotype Annotations     Click to see Annotation Detail View

Human Phenotype
Dystonia  (IAGP)
References

References - curated
# Reference Title Reference Citation
1. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:10574461   PMID:16344560   PMID:16804161   PMID:17381337   PMID:21873635   PMID:26186194   PMID:28470677   PMID:28514442   PMID:29395067   PMID:33961781   PMID:35271311  


Genomics

Comparative Map Data
PAIP2B
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38271,182,738 - 71,227,103 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl271,182,738 - 71,227,103 (-)EnsemblGRCh38hg38GRCh38
GRCh37271,409,868 - 71,454,233 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36271,263,376 - 71,307,741 (-)NCBINCBI36Build 36hg18NCBI36
Celera271,260,574 - 71,304,932 (-)NCBICelera
Cytogenetic Map2p13.3NCBI
HuRef271,146,532 - 71,191,204 (-)NCBIHuRef
CHM1_1271,339,205 - 71,383,545 (-)NCBICHM1_1
T2T-CHM13v2.0271,193,792 - 71,238,156 (-)NCBIT2T-CHM13v2.0
Paip2b
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39683,783,040 - 83,808,723 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl683,782,383 - 83,808,723 (-)EnsemblGRCm39 Ensembl
GRCm38683,806,058 - 83,831,741 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl683,805,401 - 83,831,741 (-)EnsemblGRCm38mm10GRCm38
MGSCv37683,756,052 - 83,781,735 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36683,771,721 - 83,797,322 (-)NCBIMGSCv36mm8
Celera685,789,017 - 85,814,725 (-)NCBICelera
Cytogenetic Map6C3NCBI
cM Map635.97NCBI
Paip2b
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr84117,849,625 - 117,881,021 (-)NCBIGRCr8
mRatBN7.24116,292,001 - 116,323,387 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl4116,292,020 - 116,323,379 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx4121,770,507 - 121,801,540 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.04117,545,698 - 117,576,726 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.04116,159,474 - 116,190,518 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.04115,484,676 - 115,516,307 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl4115,487,313 - 115,516,296 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.04180,073,880 - 180,105,043 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.44118,003,247 - 118,032,312 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.14118,247,727 - 118,276,790 (-)NCBI
Celera4105,284,575 - 105,315,731 (-)NCBICelera
Cytogenetic Map4q34NCBI
Paip2b
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495542414,156,768 - 14,190,865 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495542414,157,358 - 14,190,865 (+)NCBIChiLan1.0ChiLan1.0
PAIP2B
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21255,161,941 - 55,206,055 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan12A55,164,684 - 55,208,798 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v02A71,227,562 - 71,271,642 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.12A72,728,012 - 72,772,036 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl2A72,733,750 - 72,772,036 (-)Ensemblpanpan1.1panPan2
PAIP2B
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11751,381,891 - 51,388,964 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1751,385,194 - 51,413,360 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1751,093,113 - 51,101,812 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01752,291,532 - 52,324,245 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1752,291,546 - 52,324,229 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11751,318,027 - 51,326,716 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01751,389,806 - 51,398,503 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01751,964,551 - 51,973,260 (+)NCBIUU_Cfam_GSD_1.0
Paip2b
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440629213,337,941 - 13,374,264 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493649115,202,794 - 15,233,652 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_00493649115,197,028 - 15,233,652 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
PAIP2B
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl371,452,538 - 71,499,500 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1371,452,753 - 71,500,176 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2374,881,371 - 74,940,494 (+)NCBISscrofa10.2Sscrofa10.2susScr3
PAIP2B
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11435,930,797 - 35,967,398 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1435,930,819 - 35,972,073 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366604576,058,135 - 76,096,127 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Paip2b
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247622,335,544 - 2,375,376 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247622,335,522 - 2,379,674 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in PAIP2B
9 total Variants

Clinical Variants
Name Type Condition(s) Position(s) Clinical significance
GRCh38/hg38 2p13.3-13.2(chr2:70709155-72346899)x3 copy number gain See cases [RCV000133956] Chr2:70709155..72346899 [GRCh38]
Chr2:70936287..72574028 [GRCh37]
Chr2:70789795..72427536 [NCBI36]
Chr2:2p13.3-13.2
uncertain significance
GRCh38/hg38 2p16.1-11.2(chr2:58279519-83586962)x3 copy number gain See cases [RCV000136053] Chr2:58279519..83586962 [GRCh38]
Chr2:58506654..83814086 [GRCh37]
Chr2:58360158..83667597 [NCBI36]
Chr2:2p16.1-11.2
pathogenic
GRCh38/hg38 2p16.3-11.2(chr2:47620388-86702722)x3 copy number gain See cases [RCV000137586] Chr2:47620388..86702722 [GRCh38]
Chr2:47847527..86929845 [GRCh37]
Chr2:47701031..86783356 [NCBI36]
Chr2:2p16.3-11.2
uncertain significance
GRCh38/hg38 2p25.1-11.2(chr2:7495123-87705899)x3 copy number gain See cases [RCV000141494] Chr2:7495123..87705899 [GRCh38]
Chr2:7635254..88005418 [GRCh37]
Chr2:7552705..87786533 [NCBI36]
Chr2:2p25.1-11.2
benign
GRCh37/hg19 2p25.3-q37.3(chr2:14238-243048760)x3 copy number gain not provided [RCV000752802] Chr2:14238..243048760 [GRCh37]
Chr2:2p25.3-q37.3
pathogenic
GRCh37/hg19 2p15-11.2(chr2:62245236-86978895)x3 copy number gain See cases [RCV000448688] Chr2:62245236..86978895 [GRCh37]
Chr2:2p15-11.2
pathogenic
GRCh37/hg19 2p25.3-q37.3(chr2:12771-242783384) copy number gain See cases [RCV000512056] Chr2:12771..242783384 [GRCh37]
Chr2:2p25.3-q37.3
pathogenic
GRCh37/hg19 2p25.3-q37.3(chr2:12771-242783384)x3 copy number gain See cases [RCV000511212] Chr2:12771..242783384 [GRCh37]
Chr2:2p25.3-q37.3
pathogenic
GRCh37/hg19 2p13.3-13.2(chr2:71435253-71724760)x3 copy number gain not provided [RCV000682051] Chr2:71435253..71724760 [GRCh37]
Chr2:2p13.3-13.2
uncertain significance
Single allele deletion not provided [RCV000714264] Chr2:40608411..146900718 [GRCh37]
Chr2:2p22.1-q22.3
likely pathogenic
Single allele duplication not provided [RCV000677942] Chr2:63671346..85698002 [GRCh37]
Chr2:2p15-11.2
pathogenic
GRCh37/hg19 2p25.3-q37.3(chr2:15672-243101834)x3 copy number gain not provided [RCV000752804] Chr2:15672..243101834 [GRCh37]
Chr2:2p25.3-q37.3
pathogenic
GRCh37/hg19 2p13.3-13.2(chr2:71164124-71535431)x3 copy number gain not provided [RCV000846600] Chr2:71164124..71535431 [GRCh37]
Chr2:2p13.3-13.2
uncertain significance
NM_020459.1(PAIP2B):c.66T>A (p.Ser22Arg) single nucleotide variant not specified [RCV004300328] Chr2:71202524 [GRCh38]
Chr2:71429654 [GRCh37]
Chr2:2p13.3
uncertain significance
NC_000002.11:g.(?_71004499)_(74779761_?)del deletion Dystonic disorder [RCV003113211]|Methylmalonic acidemia due to methylmalonyl-CoA epimerase deficiency [RCV003113210]|not provided [RCV003107716] Chr2:71004499..74779761 [GRCh37]
Chr2:2p13.3-13.1
pathogenic|no classifications from unflagged records
GRCh37/hg19 2p25.3-q37.3(chr2:1-243199373) copy number gain Mosaic trisomy 2 [RCV002280628] Chr2:1..243199373 [GRCh37]
Chr2:2p25.3-q37.3
pathogenic
NC_000002.11:g.(?_69240632)_(74779761_?)dup duplication not provided [RCV003122858] Chr2:69240632..74779761 [GRCh37]
Chr2:2p13.3-13.1
uncertain significance
GRCh37/hg19 2p25.1-q13(chr2:11504318-111365996)x1 copy number loss See cases [RCV002287563] Chr2:11504318..111365996 [GRCh37]
Chr2:2p25.1-q13
pathogenic
NM_020459.1(PAIP2B):c.105G>C (p.Met35Ile) single nucleotide variant not specified [RCV004139204] Chr2:71202485 [GRCh38]
Chr2:71429615 [GRCh37]
Chr2:2p13.3
uncertain significance
NM_020459.1(PAIP2B):c.32C>T (p.Pro11Leu) single nucleotide variant not specified [RCV004113802] Chr2:71202558 [GRCh38]
Chr2:71429688 [GRCh37]
Chr2:2p13.3
uncertain significance
NM_020459.1(PAIP2B):c.59G>A (p.Gly20Glu) single nucleotide variant not specified [RCV004207227] Chr2:71202531 [GRCh38]
Chr2:71429661 [GRCh37]
Chr2:2p13.3
uncertain significance
GRCh37/hg19 2p13.3-12(chr2:71076472-76368354)x1 copy number loss not specified [RCV003986388] Chr2:71076472..76368354 [GRCh37]
Chr2:2p13.3-12
likely pathogenic
NM_020459.1(PAIP2B):c.28T>C (p.Ser10Pro) single nucleotide variant not specified [RCV004499942] Chr2:71202562 [GRCh38]
Chr2:71429692 [GRCh37]
Chr2:2p13.3
uncertain significance
NM_020459.1(PAIP2B):c.198T>G (p.Asp66Glu) single nucleotide variant not specified [RCV004650719] Chr2:71189962 [GRCh38]
Chr2:71417092 [GRCh37]
Chr2:2p13.3
uncertain significance
NM_020459.1(PAIP2B):c.230G>A (p.Arg77Gln) single nucleotide variant not specified [RCV004839082] Chr2:71189930 [GRCh38]
Chr2:71417060 [GRCh37]
Chr2:2p13.3
uncertain significance
NM_020459.1(PAIP2B):c.109A>T (p.Met37Leu) single nucleotide variant not specified [RCV004839083] Chr2:71202481 [GRCh38]
Chr2:71429611 [GRCh37]
Chr2:2p13.3
uncertain significance
miRNA Target Status (No longer updated)

Predicted Target Of
Summary Value
Count of predictions:2295
Count of miRNA genes:1071
Interacting mature miRNAs:1307
Transcripts:ENST00000244221
Prediction methods:Microtar, Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCh38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
597316985GWAS1413059_Hage at onset, major depressive disorder QTL GWAS1413059 (human)0.000002age at onset, major depressive disorder27121564371215644Human
597065493GWAS1161567_Hoverall survival, pancreatic carcinoma QTL GWAS1161567 (human)0.000003overall survival, pancreatic carcinoma27122054571220546Human
596973069GWAS1092588_Hage at onset, major depressive disorder QTL GWAS1092588 (human)0.000002age at onset, major depressive disorder27121564371215644Human
407183742GWAS832718_Hunipolar depression, age at onset QTL GWAS832718 (human)0.000002unipolar depression, age at onset27121564371215644Human

Markers in Region
RH16647  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37271,411,347 - 71,411,490UniSTSGRCh37
GRCh37271,312,463 - 71,312,606UniSTSGRCh37
Build 36271,165,971 - 71,166,114RGDNCBI36
Celera271,262,060 - 71,262,203UniSTS
Celera271,163,143 - 71,163,286RGD
Cytogenetic Map2p13.3UniSTS
HuRef271,049,137 - 71,049,280UniSTS
HuRef271,148,018 - 71,148,161UniSTS
GeneMap99-GB4 RH Map2220.18UniSTS
RH36348  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37271,412,082 - 71,412,183UniSTSGRCh37
GRCh37271,313,196 - 71,313,297UniSTSGRCh37
Build 36271,166,704 - 71,166,805RGDNCBI36
Celera271,262,795 - 71,262,896UniSTS
Celera271,163,876 - 71,163,977RGD
Cytogenetic Map2p13.3UniSTS
HuRef271,049,871 - 71,049,972UniSTS
HuRef271,148,753 - 71,148,854UniSTS
GeneMap99-GB4 RH Map2220.18UniSTS
WI-14958  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37271,412,892 - 71,413,040UniSTSGRCh37
Build 36271,266,400 - 71,266,548RGDNCBI36
Celera271,263,605 - 71,263,753RGD
Cytogenetic Map2p13.3UniSTS
HuRef271,149,563 - 71,149,711UniSTS
GeneMap99-GB4 RH Map2223.62UniSTS
Whitehead-RH Map2294.9UniSTS
RH68850  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37271,414,467 - 71,414,593UniSTSGRCh37
Build 36271,267,975 - 71,268,101RGDNCBI36
Celera271,265,180 - 71,265,306RGD
Cytogenetic Map2p13.3UniSTS
HuRef271,151,138 - 71,151,264UniSTS
GeneMap99-GB4 RH Map2220.18UniSTS
D11S2921  
Human AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map16q22.1UniSTS
Cytogenetic Map1p36.1UniSTS
Cytogenetic Map3p24.2UniSTS
Cytogenetic Map1q23.3UniSTS
Cytogenetic Map9q34.3UniSTS
Cytogenetic Map1p36.31UniSTS
Cytogenetic Map3p25.3UniSTS
Cytogenetic Map11p15.4UniSTS
Cytogenetic Map7p14.1UniSTS
Cytogenetic Map2q22.3UniSTS
Cytogenetic Map9q22.33UniSTS
Cytogenetic Map15q13.2UniSTS
Cytogenetic Map16q24.3UniSTS
Cytogenetic Map5q31UniSTS
Cytogenetic Map19q13.11UniSTS
Cytogenetic Map17p11.2UniSTS
Cytogenetic Map19q13.3UniSTS
Cytogenetic Map22q13.33UniSTS
Cytogenetic Map14q13.2UniSTS
Cytogenetic Map2p25.1UniSTS
Cytogenetic Map10q24.33UniSTS
Cytogenetic Map5q23.3-q31.1UniSTS
Cytogenetic Map8p21.3UniSTS
Cytogenetic Map22q13.1UniSTS
Cytogenetic Map1p32.3UniSTS
Cytogenetic Map17q11UniSTS
Cytogenetic Map1q24UniSTS
Cytogenetic Map11q14UniSTS
Cytogenetic Map17q25UniSTS
Cytogenetic MapXq13.1UniSTS
Cytogenetic Map2q11.2UniSTS
Cytogenetic Map9p13.3UniSTS
Cytogenetic Map19p13.2UniSTS
Cytogenetic Map2q32.3UniSTS
Cytogenetic Map17q21.31UniSTS
Cytogenetic Map19q13.12UniSTS
Cytogenetic Map4q32.1UniSTS
Cytogenetic Map7q34UniSTS
Cytogenetic Map13q12UniSTS
Cytogenetic Map12p13.31UniSTS
Cytogenetic Map3p21.1UniSTS
Cytogenetic Map3q12.3UniSTS
Cytogenetic Map14q24.3UniSTS
Cytogenetic Map6q22UniSTS
Cytogenetic Map22q13.2UniSTS
Cytogenetic Map19q13.42UniSTS
Cytogenetic Map17q12UniSTS
Cytogenetic Map20q11UniSTS
Cytogenetic Map8q22.1UniSTS
Cytogenetic Map5q23.3UniSTS
Cytogenetic Map20q11.22UniSTS
Cytogenetic Map1p36.11UniSTS
Cytogenetic Map19q13.43UniSTS
Cytogenetic Map17q21UniSTS
Cytogenetic Map11q25UniSTS
Cytogenetic Map3p21.3UniSTS
Cytogenetic Map1q32.3UniSTS
Cytogenetic Map2q37.3UniSTS
Cytogenetic Map12q21.33UniSTS
Cytogenetic Map7p22.3UniSTS
Cytogenetic Map4p16.3UniSTS
Cytogenetic Map17p13.3UniSTS
Cytogenetic Map1p35.1UniSTS
Cytogenetic MapXp11.4-p11.3UniSTS
Cytogenetic Map17q11.2UniSTS
Cytogenetic Map1p36.33UniSTS
Cytogenetic Map19p13.3UniSTS
Cytogenetic Map1q24.1UniSTS
Cytogenetic Map14q11.2UniSTS
Cytogenetic Map16p11.2UniSTS
Cytogenetic Map11q24.2UniSTS
Cytogenetic Map10p15.1UniSTS
Cytogenetic Map18p11.31UniSTS
Cytogenetic Map12p13.32UniSTS
Cytogenetic Map19p13.11UniSTS
Cytogenetic Map11q13.5UniSTS
Cytogenetic Map1p22UniSTS
Cytogenetic Map2q14UniSTS
Cytogenetic Map16q24UniSTS
Cytogenetic Map16p13.3UniSTS
Cytogenetic Map7p22UniSTS
Cytogenetic Map14q32.33UniSTS
Cytogenetic Map8p11.21UniSTS
Cytogenetic Map8q24.11UniSTS
Cytogenetic Map4q12UniSTS
Cytogenetic Map9q22.31UniSTS
Cytogenetic Map17p13.2UniSTS
Cytogenetic Map11p15.5UniSTS
Cytogenetic Map2p11.2UniSTS
Cytogenetic Map7q11.23UniSTS
Cytogenetic Map5q31.1UniSTS
Cytogenetic Map2q33-q34UniSTS
Cytogenetic Map17q22.2UniSTS
Cytogenetic Map8q24.13UniSTS
Cytogenetic Map22q11.2UniSTS
Cytogenetic Map6p22.1UniSTS
Cytogenetic MapYp11.2UniSTS
Cytogenetic Map19q13.2UniSTS
Cytogenetic Map18p11.21UniSTS
Cytogenetic Map10q22UniSTS
Cytogenetic Map5q35.3UniSTS
Cytogenetic Map10q23.1UniSTS
Cytogenetic Map2q37UniSTS
Cytogenetic Map18pter-p11.3UniSTS
Cytogenetic Map8q22.3UniSTS
Cytogenetic Map6p21.33UniSTS
Cytogenetic Map7q22.1UniSTS
Cytogenetic Map2q21.3UniSTS
Cytogenetic Map2q21.1UniSTS
Cytogenetic Map8p21.2UniSTS
Cytogenetic MapXq22.1UniSTS
Cytogenetic Map10q22.2UniSTS
Cytogenetic Map1p34.2UniSTS
Cytogenetic Map19q13.41UniSTS
Cytogenetic Map14q32.12UniSTS
Cytogenetic Map3q21.3UniSTS
Cytogenetic Map4q34.1UniSTS
Cytogenetic Map10p13UniSTS
Cytogenetic Map17q25.3UniSTS
Cytogenetic Map3q13.31UniSTS
Cytogenetic Map7q21.12UniSTS
Cytogenetic Map15q22.2UniSTS
Cytogenetic Map8p23.1UniSTS
Cytogenetic Map5q32UniSTS
Cytogenetic Map20q13.12UniSTS
Cytogenetic Map12q23.2UniSTS
Cytogenetic Map6p22UniSTS
Cytogenetic Map11q12.3UniSTS
Cytogenetic Map11p13UniSTS
Cytogenetic Map1q21.3UniSTS
Cytogenetic Map16p13.13UniSTS
Cytogenetic Map1p34UniSTS
Cytogenetic Map1p36.21UniSTS
Cytogenetic Map12q13UniSTS
Cytogenetic Map19q13.31UniSTS
Cytogenetic Map19q13.4UniSTS
Cytogenetic Map4p14UniSTS
Cytogenetic Map1q44UniSTS
Cytogenetic Map19p13.1-p12UniSTS
Cytogenetic Map7q22UniSTS
Cytogenetic Map8q24UniSTS
Cytogenetic Map18p11.31-p11.21UniSTS
Cytogenetic Map21q22.3UniSTS
Cytogenetic Map7p21.2UniSTS
Cytogenetic Map12q23-q24.1UniSTS
Cytogenetic Map15q15.1UniSTS
Cytogenetic Map10q11.23UniSTS
Cytogenetic Map5q14.1UniSTS
Cytogenetic Map5p15.33UniSTS
Cytogenetic Map1q21UniSTS
Cytogenetic Map22q11.21UniSTS
Cytogenetic Map8q24.3UniSTS
Cytogenetic Map1q42.1UniSTS
Cytogenetic Map12p13UniSTS
Cytogenetic Map15q21UniSTS
Cytogenetic Map6p21.3UniSTS
Cytogenetic Map8p11.22UniSTS
Cytogenetic Map2q12.3UniSTS
Cytogenetic Map19q13.3-q13.4UniSTS
Cytogenetic Map15q11.2UniSTS
Cytogenetic Map5q35UniSTS
Cytogenetic Map8p23-p22UniSTS
Cytogenetic Map12p11UniSTS
Cytogenetic Map17q21-q22UniSTS
Cytogenetic Map12q13.12UniSTS
Cytogenetic Map2q36.1UniSTS
Cytogenetic Map11p13-p12UniSTS
Cytogenetic MapXp22.33UniSTS
Cytogenetic MapYp11.3UniSTS
Cytogenetic Map2q12.1UniSTS
Cytogenetic Map3p21.31UniSTS
Cytogenetic Map3q26.32UniSTS
Cytogenetic Map7q11.21UniSTS
Cytogenetic Map10q11.22UniSTS
Cytogenetic Map17p12UniSTS
Cytogenetic Map3p25.1UniSTS
Cytogenetic Map14q32UniSTS
Cytogenetic Map5q12-q13UniSTS
Cytogenetic Map6p23UniSTS
Cytogenetic Map20p12.3-p11.21UniSTS
Cytogenetic Map17q11.2-q12UniSTS
Cytogenetic Map11q23.3UniSTS
Cytogenetic Map12q13.3UniSTS
Cytogenetic Map10q23-q24UniSTS
Cytogenetic Map14q21.3UniSTS
Cytogenetic Map11q13UniSTS
Cytogenetic Map12q13-q14UniSTS
Cytogenetic Map6q14.1UniSTS
Cytogenetic Map3q26.33UniSTS
Cytogenetic MapXp22.2UniSTS
Cytogenetic Map1p31UniSTS
Cytogenetic Map15q15-q21.1UniSTS
Cytogenetic Map9q32UniSTS
Cytogenetic Map17p13UniSTS
Cytogenetic Map7q21-q22UniSTS
Cytogenetic Map16q24.1UniSTS
Cytogenetic Map2q33.3UniSTS
Cytogenetic Map11q22.1UniSTS
Cytogenetic Map1p13.3UniSTS
Cytogenetic Map20p13UniSTS
Cytogenetic Map6p21.1UniSTS
Cytogenetic Map7q36.3UniSTS
Cytogenetic Map5q12.3UniSTS
Cytogenetic Map2q33.2UniSTS
Cytogenetic Map12q22UniSTS
Cytogenetic Map21p11.1UniSTS
Cytogenetic Map14q23.2UniSTS
Cytogenetic Map6p22.3-p22.1UniSTS
Cytogenetic Map7p11.2UniSTS
Cytogenetic Map6q15UniSTS
Cytogenetic MapXq25-q26.3UniSTS
Cytogenetic Map10q22.3UniSTS
Cytogenetic Map12q24.31-q24.32UniSTS
Cytogenetic Map16p12.3UniSTS
Cytogenetic Map9q33.2UniSTS
Cytogenetic Map15q23UniSTS
Cytogenetic Map12p12.2-p11.2UniSTS
Cytogenetic Map2q14.3UniSTS
Cytogenetic MapXp11UniSTS
Cytogenetic Map19q13UniSTS
Cytogenetic Map17q22UniSTS
Cytogenetic Map3q21UniSTS
Cytogenetic Map20q13.2UniSTS
Cytogenetic Map10q26UniSTS
Cytogenetic Map6q22.31UniSTS
Cytogenetic Map3q27.1UniSTS
Cytogenetic Map7p13UniSTS
Cytogenetic Map22q13UniSTS
Cytogenetic Map11q13.1UniSTS
Cytogenetic Map18p11.32UniSTS
Cytogenetic Map12q15UniSTS
Cytogenetic MapXq22.3UniSTS
Cytogenetic Map2p25.3UniSTS
Cytogenetic Map16q21UniSTS
Cytogenetic Map11q23.1UniSTS
Cytogenetic Map3q13.13UniSTS
Cytogenetic Map12q24.31UniSTS
Cytogenetic Map3q27.3UniSTS
Cytogenetic Map4p13UniSTS
Cytogenetic Map16p12.1UniSTS
Cytogenetic Map14q32.11UniSTS
Cytogenetic Map7p14.3UniSTS
Cytogenetic Map16q12.1UniSTS
Cytogenetic Map15q25.2UniSTS
Cytogenetic Map9q21.13UniSTS
Cytogenetic Map2p23.3UniSTS
Cytogenetic Map3q29UniSTS
Cytogenetic Map15q22.31UniSTS
Cytogenetic Map16q22.2UniSTS
Cytogenetic Map19p13.12UniSTS
Cytogenetic Map20q13.1UniSTS
Cytogenetic Map3p14.3UniSTS
Cytogenetic Map10q23.33UniSTS
Cytogenetic Map12p12UniSTS
Cytogenetic Map9p24.1-p23UniSTS
Cytogenetic Map15q22UniSTS
Cytogenetic Map6p25UniSTS
Cytogenetic MapXq12-q13UniSTS
Cytogenetic Map2p16.1UniSTS
Cytogenetic Map14q23UniSTS
Cytogenetic Map2q31.1UniSTS
Cytogenetic Map17q23.3UniSTS
Cytogenetic Map1q42.1-q43UniSTS
Cytogenetic Map7q31.1-q31.3UniSTS
Cytogenetic Map20q11.21UniSTS
Cytogenetic Map20q12-q13.12UniSTS
Cytogenetic Map1q24-q25.3UniSTS
Cytogenetic Map20p12.1UniSTS
Cytogenetic Map14q32.31UniSTS
Cytogenetic Map1p13.2UniSTS
Cytogenetic Map2p13.3UniSTS
Cytogenetic Map6q25.1-q26UniSTS
Cytogenetic Map12q13.11-q14.3UniSTS
Cytogenetic Map7p11UniSTS
Cytogenetic Map12p11.22UniSTS
Cytogenetic Map17q23.1UniSTS
Cytogenetic Map1p36.13UniSTS
Cytogenetic Map9q34.11UniSTS
Cytogenetic Map2p15UniSTS
Cytogenetic Map9p11UniSTS
Cytogenetic Map6p24.3UniSTS
Cytogenetic Map9p24.1UniSTS
Cytogenetic Map12p13.2UniSTS
Cytogenetic Map6p22.2UniSTS
Cytogenetic Map12q24.2-q24.31UniSTS
Cytogenetic Map22q12.2UniSTS
Cytogenetic Map11p11.11UniSTS
Cytogenetic Map11q22-q23UniSTS
Cytogenetic Map11q14.1UniSTS
Cytogenetic Map1q32.1UniSTS
Cytogenetic Map15q22-q23UniSTS
Cytogenetic Map9p21UniSTS
Cytogenetic Map15q13.1UniSTS
Cytogenetic Map15q22-qterUniSTS
Cytogenetic Map10q25UniSTS
Cytogenetic Map6p22.3UniSTS
Cytogenetic Map6p25.2UniSTS
Cytogenetic Map5p15.1UniSTS
Cytogenetic Map2p21UniSTS
Cytogenetic Map22q13.31UniSTS
Cytogenetic Map21q22.2UniSTS
Cytogenetic Map19q13.33UniSTS
Cytogenetic Map14q24.1UniSTS
Cytogenetic Map13q34UniSTS
Cytogenetic Map18q11.2UniSTS
Cytogenetic Map6q25.1UniSTS
Cytogenetic Map20q11.23UniSTS
Cytogenetic Map1q21.1UniSTS
Cytogenetic Map17q24.3UniSTS
Cytogenetic Map16q11.2UniSTS
Cytogenetic Map16p12.2UniSTS
Cytogenetic Map11q24UniSTS
Cytogenetic Map2q23.3UniSTS
Cytogenetic Map1p31.1UniSTS
Cytogenetic Map18q23UniSTS
Cytogenetic Map11q13.4UniSTS
Cytogenetic Map7p21.1UniSTS
Cytogenetic Map2q37.1UniSTS
Cytogenetic Map8p11.2UniSTS
Cytogenetic Map9q33.3UniSTS
Cytogenetic Map4q22.1UniSTS
Cytogenetic Map2q21.2UniSTS
Cytogenetic Map15q13.3UniSTS
Cytogenetic Map7p15.3UniSTS
Cytogenetic Map3p22.2UniSTS
Cytogenetic Map11q13.2UniSTS
Cytogenetic Map19p13.2-cenUniSTS
Cytogenetic Map19p13.3-p13.2UniSTS
Cytogenetic Map13q32.3UniSTS
Cytogenetic Map9q33UniSTS
Cytogenetic Map1p36-p35UniSTS
Cytogenetic Map19q13.1UniSTS
Cytogenetic MapXq25UniSTS
Cytogenetic Map12q23UniSTS
Cytogenetic Map21q22.13UniSTS
Cytogenetic Map2q24.2UniSTS
Cytogenetic Map7q31.1-q31.2UniSTS
Cytogenetic Map22q11.23UniSTS
Cytogenetic MapXq24UniSTS
Cytogenetic Map4q25-q27UniSTS
Cytogenetic Map3q25.33UniSTS
Cytogenetic MapXq26.2UniSTS
Cytogenetic Map8q13.2UniSTS
Cytogenetic Map8q13.1UniSTS
Cytogenetic Map8q22.2UniSTS
Cytogenetic Map6q21UniSTS
Cytogenetic Map5q23.1UniSTS
Cytogenetic Map4q13.3UniSTS
Cytogenetic Map3p26.1UniSTS
Cytogenetic Map1q21.2UniSTS
Cytogenetic Map17p13.1UniSTS
Cytogenetic Map3p22-p21.3UniSTS
Cytogenetic Map12qUniSTS
Cytogenetic MapXq21.3UniSTS
Cytogenetic Map12q12UniSTS
Cytogenetic Map20p11UniSTS
Cytogenetic Map6p12.3UniSTS
Cytogenetic Map5p13.1-p12UniSTS
Cytogenetic Map1p36.22UniSTS
Cytogenetic Map9q34UniSTS
Cytogenetic Map7q21.13UniSTS
Cytogenetic Map20q13.33UniSTS
Cytogenetic Map3p21.1-p14.3UniSTS
Cytogenetic Map2q33.1UniSTS
Cytogenetic Map7q36.1UniSTS
Cytogenetic Map10q24.31UniSTS
Cytogenetic Map2p25.1-p24.1UniSTS
Cytogenetic Map3q23UniSTS
Cytogenetic Map13q12.11UniSTS
Cytogenetic Map12q14.3UniSTS
Cytogenetic Map13q14.13UniSTS
Cytogenetic Map11p15UniSTS
Cytogenetic Map6q14.3-q16.1UniSTS
Cytogenetic Map16p13.2UniSTS
Cytogenetic Map16q22.3UniSTS
Cytogenetic Map1p32-p31UniSTS
Cytogenetic Map12q13.13UniSTS
Cytogenetic Map8p11UniSTS
Cytogenetic Map6q25UniSTS
Cytogenetic Map8p11.23UniSTS
Cytogenetic Map9p24.3UniSTS
Cytogenetic Map7q35UniSTS
Cytogenetic Map11q22.3UniSTS
Cytogenetic Map16p12UniSTS
Cytogenetic Map6q14.3UniSTS
Cytogenetic Map7q36UniSTS
Cytogenetic Map1q22UniSTS
Cytogenetic Map10p15.3UniSTS
Cytogenetic Map8p12UniSTS
Cytogenetic Map13q12.2UniSTS
Cytogenetic Map7p22.1UniSTS
Cytogenetic Map6p21.2UniSTS
Cytogenetic Map18q21.1UniSTS
Cytogenetic Map10p11.21UniSTS
Cytogenetic Map10p14UniSTS
Cytogenetic Map3p26UniSTS
Cytogenetic Map9q22.3UniSTS
Cytogenetic Map17q21.1-q21.3UniSTS
Cytogenetic Map6q11.1UniSTS
Cytogenetic Map5q13.2UniSTS
Cytogenetic Map3q21.1UniSTS
Cytogenetic Map1q32UniSTS
Cytogenetic Map22q13.1-q13.2UniSTS
Cytogenetic Map19p12UniSTS
Cytogenetic Map9q32-q33.3UniSTS
Cytogenetic Map8q21.2UniSTS
Cytogenetic Map18q12.1UniSTS
Cytogenetic Map12p13.2-p12.3UniSTS
Cytogenetic Map1p36.3-p36.2UniSTS
Cytogenetic Map5q11.2UniSTS
Cytogenetic Map1q25.2UniSTS
Cytogenetic Map3q13.2UniSTS
Cytogenetic Map8p22UniSTS
Cytogenetic Map1q25.1UniSTS
Cytogenetic Map18q21.32UniSTS
Cytogenetic Map17q21.2UniSTS
Cytogenetic Map15q26.2UniSTS
Cytogenetic Map14q22.1UniSTS
Cytogenetic Map5p15.2UniSTS
Cytogenetic Map12q23.1UniSTS
Cytogenetic Map10q24.2UniSTS
Cytogenetic Map15q15.3UniSTS
Cytogenetic Map1p22.2UniSTS
Cytogenetic Map7q32UniSTS
Cytogenetic Map5p13UniSTS
Cytogenetic Map16q23.2UniSTS
Cytogenetic Map10q24-q25UniSTS
Cytogenetic Map7p11.1UniSTS
Cytogenetic Map14q11.2-q21UniSTS
Cytogenetic Map14q12UniSTS
Cytogenetic Map12q24.13UniSTS
Cytogenetic Map10q21-q22UniSTS
Cytogenetic Map4q22UniSTS
Cytogenetic Map9q22.2UniSTS
Cytogenetic Map10q23.31UniSTS
Cytogenetic Map2p13.1UniSTS
Cytogenetic Map2p24.1UniSTS
Cytogenetic Map19p13UniSTS
Cytogenetic Map7p13-p11.1UniSTS
Cytogenetic Map7q21.1-q22UniSTS
Cytogenetic Map1p36.3UniSTS
Cytogenetic Map15q26.1UniSTS
Cytogenetic Map2q32.1UniSTS
Cytogenetic Map5p14.3UniSTS
Cytogenetic MapXp22.13UniSTS
Cytogenetic Map13q14.2UniSTS
Cytogenetic Map15qUniSTS
Cytogenetic Map7qUniSTS
Cytogenetic Map17q25.1UniSTS
Cytogenetic Map10q23UniSTS
Cytogenetic Map5p12UniSTS
Cytogenetic Map11p11.2UniSTS
Cytogenetic Map10q11.21UniSTS
Cytogenetic Map20q13.13UniSTS
Cytogenetic Map13q22.1UniSTS
Cytogenetic Map15q21.2UniSTS
Cytogenetic MapXq28UniSTS
Cytogenetic Map9p13.1UniSTS
Cytogenetic Map9q34.13UniSTS
RH36004  
Human AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map2p13.3UniSTS
GeneMap99-GB4 RH Map2231.98UniSTS


Expression

RNA-SEQ Expression

adipose tissue
alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
entire extraembryonic component
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
pharyngeal arch
renal system
reproductive system
respiratory system
sensory system
visual system
1204 2436 2788 2253 4973 1724 2349 6 622 1941 463 2269 7293 6462 53 3734 1 852 1741 1617 174 1

Sequence

Nucleotide Sequences
RefSeq Transcripts NM_020459 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_005264310 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_005264311 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011532842 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011532843 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054342025 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054342026 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054342027 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AB032981 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC007878 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC007881 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC093654 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL110211 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH471053 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CP068276 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DA247526 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DA346299 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENST00000244221   ⟹   ENSP00000244221
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl271,182,738 - 71,227,103 (-)Ensembl
RefSeq Acc Id: NM_020459   ⟹   NP_065192
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38271,182,738 - 71,227,103 (-)NCBI
GRCh37271,409,868 - 71,454,233 (-)RGD
Build 36271,263,376 - 71,307,741 (-)NCBI Archive
Celera271,260,574 - 71,304,932 (-)RGD
HuRef271,146,532 - 71,191,204 (-)RGD
CHM1_1271,339,205 - 71,383,545 (-)NCBI
T2T-CHM13v2.0271,193,792 - 71,238,156 (-)NCBI
Sequence:
RefSeq Acc Id: XM_005264310   ⟹   XP_005264367
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38271,182,738 - 71,226,416 (-)NCBI
GRCh37271,409,868 - 71,454,233 (-)NCBI
Sequence:
RefSeq Acc Id: XM_005264311   ⟹   XP_005264368
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38271,182,738 - 71,226,416 (-)NCBI
GRCh37271,409,868 - 71,454,233 (-)NCBI
Sequence:
RefSeq Acc Id: XM_011532842   ⟹   XP_011531144
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38271,182,738 - 71,226,416 (-)NCBI
Sequence:
RefSeq Acc Id: XM_054342025   ⟹   XP_054198000
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0271,193,792 - 71,237,549 (-)NCBI
RefSeq Acc Id: XM_054342026   ⟹   XP_054198001
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0271,193,792 - 71,237,559 (-)NCBI
RefSeq Acc Id: XM_054342027   ⟹   XP_054198002
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0271,193,792 - 71,237,461 (-)NCBI
RefSeq Acc Id: NP_065192   ⟸   NM_020459
- UniProtKB: Q9ULR5 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_005264368   ⟸   XM_005264311
- Peptide Label: isoform X2
- UniProtKB: Q9ULR5 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_005264367   ⟸   XM_005264310
- Peptide Label: isoform X2
- UniProtKB: Q9ULR5 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_011531144   ⟸   XM_011532842
- Peptide Label: isoform X1
- Sequence:
Ensembl Acc Id: ENSP00000244221   ⟸   ENST00000244221
RefSeq Acc Id: XP_054198001   ⟸   XM_054342026
- Peptide Label: isoform X2
- UniProtKB: Q9ULR5 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: XP_054198000   ⟸   XM_054342025
- Peptide Label: isoform X1
RefSeq Acc Id: XP_054198002   ⟸   XM_054342027
- Peptide Label: isoform X2
- UniProtKB: Q9ULR5 (UniProtKB/Swiss-Prot)

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q9ULR5-F1-model_v2 AlphaFold Q9ULR5 1-123 view protein structure

Promoters
RGD ID:6860638
Promoter ID:EPDNEW_H3484
Type:initiation region
Name:PAIP2B_1
Description:poly binding protein interacting protein 2B
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Human AssemblyChrPosition (strand)Source
GRCh38271,227,103 - 71,227,163EPDNEW
RGD ID:6797908
Promoter ID:HG_KWN:33186
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:CD4+TCell,   CD4+TCell_12Hour,   CD4+TCell_2Hour,   Jurkat,   K562,   Lymphoblastoid,   NB4
Transcripts:NM_020459
Position:
Human AssemblyChrPosition (strand)Source
Build 36271,307,541 - 71,308,041 (-)MPROMDB

Additional Information

Database Acc Id Source(s)
AGR Gene HGNC:29200 AgrOrtholog
COSMIC PAIP2B COSMIC
Ensembl Genes ENSG00000124374 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript ENST00000244221 ENTREZGENE
  ENST00000244221.9 UniProtKB/Swiss-Prot
GTEx ENSG00000124374 GTEx
HGNC ID HGNC:29200 ENTREZGENE
Human Proteome Map PAIP2B Human Proteome Map
InterPro Ataxin-2_C UniProtKB/Swiss-Prot
  PAIP2-like UniProtKB/Swiss-Prot
KEGG Report hsa:400961 UniProtKB/Swiss-Prot
NCBI Gene 400961 ENTREZGENE
OMIM 611018 OMIM
PANTHER POLYADENYLATE-BINDING PROTEIN-INTERACTING PROTEIN 2B UniProtKB/Swiss-Prot
  PTHR13154 UniProtKB/Swiss-Prot
Pfam PAM2 UniProtKB/Swiss-Prot
PharmGKB KIAA1155 RGD
  PA162398595 PharmGKB
UniProt PAI2B_HUMAN UniProtKB/Swiss-Prot, ENTREZGENE