HVCN1 (hydrogen voltage gated channel 1) - Rat Genome Database

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Gene: HVCN1 (hydrogen voltage gated channel 1) Homo sapiens
Analyze
Symbol: HVCN1
Name: hydrogen voltage gated channel 1
RGD ID: 1603943
HGNC Page HGNC:28240
Description: Enables protein homodimerization activity and voltage-gated proton channel activity. Involved in several processes, including cellular response to zinc ion; proton transmembrane transport; and regulation of reactive oxygen species biosynthetic process. Located in phagocytic vesicle membrane; plasma membrane; and sperm flagellum.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: HV1; hydrogen voltage-gated channel 1; MGC15619; voltage sensor domain-only protein; voltage-gated hydrogen channel 1; VSOP
RGD Orthologs
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Allele / Splice: See ClinVar data
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh3812110,648,686 - 110,704,952 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl12110,627,841 - 110,704,950 (-)EnsemblGRCh38hg38GRCh38
GRCh3712111,086,491 - 111,127,582 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 3612109,570,874 - 109,612,000 (-)NCBINCBI36Build 36hg18NCBI36
Celera12110,713,319 - 110,754,445 (-)NCBICelera
Cytogenetic Map12q24.11NCBI
HuRef12108,104,197 - 108,145,322 (-)NCBIHuRef
CHM1_112111,054,153 - 111,095,269 (-)NCBICHM1_1
T2T-CHM13v2.012110,626,380 - 110,682,642 (-)NCBIT2T-CHM13v2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Neurovascular protection in voltage-gated proton channel Hv1 knock-out rats after ischemic stroke: interaction with Na+ /H+ exchanger-1 antagonism. Li W, etal., Physiol Rep. 2019 Aug;7(13):e14142. doi: 10.14814/phy2.14142.
2. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
3. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
4. Transcriptomic characteristics of bronchoalveolar lavage fluid and peripheral blood mononuclear cells in COVID-19 patients. Xiong Y, etal., Emerg Microbes Infect. 2020 Dec;9(1):761-770. doi: 10.1080/22221751.2020.1747363.
Additional References at PubMed
PMID:12477932   PMID:12975309   PMID:15342556   PMID:16344560   PMID:16554753   PMID:16556803   PMID:17948262   PMID:18356202   PMID:18509058   PMID:19233200   PMID:19255483   PMID:19805063  
PMID:20018719   PMID:20037153   PMID:20139987   PMID:20144758   PMID:20147290   PMID:20543828   PMID:20548053   PMID:20676047   PMID:20693294   PMID:20961760   PMID:21124855   PMID:21516116  
PMID:21821008   PMID:21843503   PMID:21873635   PMID:22020278   PMID:22056415   PMID:22367212   PMID:22388960   PMID:23352164   PMID:23352165   PMID:23891691   PMID:23940591   PMID:24379371  
PMID:24415791   PMID:24867409   PMID:25296308   PMID:25425665   PMID:25446125   PMID:25964989   PMID:26186194   PMID:26458876   PMID:26559003   PMID:27572256   PMID:27859356   PMID:28013412  
PMID:28064239   PMID:28514442   PMID:29743300   PMID:29925021   PMID:30021884   PMID:30196744   PMID:30478045   PMID:31462498   PMID:31633762   PMID:32346069   PMID:32374759   PMID:32788354  
PMID:32788614   PMID:32814053   PMID:33807711   PMID:33875847   PMID:33961781   PMID:34158477   PMID:36788452   PMID:37315791   PMID:38272234   PMID:39259593  


Genomics

Comparative Map Data
HVCN1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh3812110,648,686 - 110,704,952 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl12110,627,841 - 110,704,950 (-)EnsemblGRCh38hg38GRCh38
GRCh3712111,086,491 - 111,127,582 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 3612109,570,874 - 109,612,000 (-)NCBINCBI36Build 36hg18NCBI36
Celera12110,713,319 - 110,754,445 (-)NCBICelera
Cytogenetic Map12q24.11NCBI
HuRef12108,104,197 - 108,145,322 (-)NCBIHuRef
CHM1_112111,054,153 - 111,095,269 (-)NCBICHM1_1
T2T-CHM13v2.012110,626,380 - 110,682,642 (-)NCBIT2T-CHM13v2.0
Hvcn1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm395122,344,872 - 122,380,360 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl5122,344,867 - 122,380,360 (+)EnsemblGRCm39 Ensembl
GRCm385122,206,805 - 122,242,297 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl5122,206,804 - 122,242,297 (+)EnsemblGRCm38mm10GRCm38
MGSCv375122,659,746 - 122,692,306 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv365122,470,904 - 122,502,890 (+)NCBIMGSCv36mm8
Celera5119,292,209 - 119,324,695 (+)NCBICelera
Cytogenetic Map5FNCBI
cM Map562.23NCBI
Hvcn1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81240,001,205 - 40,030,671 (-)NCBIGRCr8
mRatBN7.21234,341,673 - 34,370,010 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1234,335,190 - 34,370,141 (-)EnsemblmRatBN7.2 Ensembl
Rnor_6.01239,822,814 - 39,851,093 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1239,822,637 - 39,850,567 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01241,702,567 - 41,731,349 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41235,536,954 - 35,556,666 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11235,401,133 - 35,431,692 (-)NCBI
Celera1236,012,998 - 36,041,213 (-)NCBICelera
Cytogenetic Map12q16NCBI
Hvcn1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554827,529,277 - 7,538,363 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554827,529,009 - 7,563,273 (-)NCBIChiLan1.0ChiLan1.0
HVCN1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v210118,708,433 - 118,749,147 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan112118,704,838 - 118,745,536 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v012108,217,516 - 108,258,210 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.112111,611,645 - 111,652,240 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl12111,591,050 - 111,645,632 (-)Ensemblpanpan1.1panPan2
HVCN1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1268,437,032 - 8,474,831 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl268,419,269 - 8,466,523 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha268,600,377 - 8,638,008 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0268,695,233 - 8,733,429 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl268,693,835 - 8,730,452 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1268,653,672 - 8,691,298 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0268,715,797 - 8,753,482 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0268,668,380 - 8,703,287 (-)NCBIUU_Cfam_GSD_1.0
Hvcn1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405118155,869,670 - 155,899,754 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365583,579,341 - 3,609,789 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365583,581,409 - 3,609,714 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
HVCN1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1431,989,170 - 32,043,744 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11432,006,837 - 32,044,165 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21433,930,483 - 33,965,967 (-)NCBISscrofa10.2Sscrofa10.2susScr3
HVCN1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.111105,892,024 - 105,932,671 (-)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_023666037139,183,839 - 139,225,073 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Hvcn1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462474721,256,918 - 21,264,984 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462474721,237,736 - 21,266,531 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in HVCN1
9 total Variants

Clinical Variants
Name Type Condition(s) Position(s) Clinical significance
GRCh38/hg38 12q23.3-24.13(chr12:105234677-112194686)x1 copy number loss See cases [RCV000050807] Chr12:105234677..112194686 [GRCh38]
Chr12:105628455..112632490 [GRCh37]
Chr12:104152585..111116873 [NCBI36]
Chr12:12q23.3-24.13
pathogenic
NM_001040107.1(HVCN1):c.95G>A (p.Gly32Glu) single nucleotide variant Malignant melanoma [RCV000062397] Chr12:110661375 [GRCh38]
Chr12:111099180 [GRCh37]
Chr12:109583563 [NCBI36]
Chr12:12q24.11
not provided
NM_024549.5(TCTN1):c.1457C>T (p.Ser486Phe) single nucleotide variant Malignant melanoma [RCV000069812] Chr12:110647215 [GRCh38]
Chr12:111085020 [GRCh37]
Chr12:109569403 [NCBI36]
Chr12:12q24.11
not provided
GRCh38/hg38 12p13.33-q24.33(chr12:121271-133196807)x3 copy number gain See cases [RCV000139555] Chr12:121271..133196807 [GRCh38]
Chr12:282465..133773393 [GRCh37]
Chr12:100698..132283466 [NCBI36]
Chr12:12p13.33-q24.33
pathogenic
GRCh37/hg19 12p13.33-q24.33(chr12:1-133851895)x3 copy number gain See cases [RCV000258805] Chr12:1..133851895 [GRCh37]
Chr12:12p13.33-q24.33
pathogenic|likely pathogenic
GRCh37/hg19 12q23.2-24.11(chr12:103044333-111639805)x1 copy number loss See cases [RCV000445832] Chr12:103044333..111639805 [GRCh37]
Chr12:12q23.2-24.11
likely pathogenic
GRCh37/hg19 12p13.33-q24.33(chr12:173787-133777902)x3 copy number gain See cases [RCV000510482] Chr12:173787..133777902 [GRCh37]
Chr12:12p13.33-q24.33
pathogenic
GRCh37/hg19 12p13.33-q24.33(chr12:173787-133777902) copy number gain See cases [RCV000511643] Chr12:173787..133777902 [GRCh37]
Chr12:12p13.33-q24.33
pathogenic
NM_032369.4(HVCN1):c.535G>A (p.Val179Met) single nucleotide variant not specified [RCV004324674] Chr12:110651325 [GRCh38]
Chr12:111089130 [GRCh37]
Chr12:12q24.11
uncertain significance
GRCh37/hg19 12p13.33-q24.33(chr12:191619-133777645)x3 copy number gain not provided [RCV000750246] Chr12:191619..133777645 [GRCh37]
Chr12:12p13.33-q24.33
pathogenic
GRCh37/hg19 12p13.33-q24.33(chr12:621220-133779118)x3 copy number gain not provided [RCV000750253] Chr12:621220..133779118 [GRCh37]
Chr12:12p13.33-q24.33
pathogenic
GRCh37/hg19 12q23.3-24.12(chr12:106498814-112252906)x1 copy number loss not provided [RCV001259630] Chr12:106498814..112252906 [GRCh37]
Chr12:12q23.3-24.12
pathogenic
GRCh37/hg19 12q23.3-24.12(chr12:104230462-111984801)x1 copy number loss not provided [RCV001834231] Chr12:104230462..111984801 [GRCh37]
Chr12:12q23.3-24.12
pathogenic
GRCh37/hg19 12q23.2-24.11(chr12:103044333-111639805) copy number loss not specified [RCV002053016] Chr12:103044333..111639805 [GRCh37]
Chr12:12q23.2-24.11
likely pathogenic
NM_032369.4(HVCN1):c.704A>G (p.Asn235Ser) single nucleotide variant not specified [RCV004107596] Chr12:110650220 [GRCh38]
Chr12:111088025 [GRCh37]
Chr12:12q24.11
uncertain significance
NM_032369.4(HVCN1):c.797A>G (p.His266Arg) single nucleotide variant not specified [RCV004242064] Chr12:110649435 [GRCh38]
Chr12:111087240 [GRCh37]
Chr12:12q24.11
uncertain significance
NM_032369.4(HVCN1):c.713T>C (p.Leu238Ser) single nucleotide variant not specified [RCV004273438] Chr12:110650211 [GRCh38]
Chr12:111088016 [GRCh37]
Chr12:12q24.11
uncertain significance
NM_032369.4(HVCN1):c.667C>A (p.Arg223Ser) single nucleotide variant not specified [RCV004635371] Chr12:110650257 [GRCh38]
Chr12:111088062 [GRCh37]
Chr12:12q24.11
uncertain significance
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:2193
Count of miRNA genes:838
Interacting mature miRNAs:969
Transcripts:ENST00000242607, ENST00000356742, ENST00000439744, ENST00000546425, ENST00000546713, ENST00000547887, ENST00000548312, ENST00000549442
Prediction methods:Microtar, Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCh38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
407151620GWAS800596_Hplatelet count QTL GWAS800596 (human)2e-08platelet quantity (VT:0003179)platelet count (CMO:0000029)12110672222110672223Human
407120133GWAS769109_Heosinophil count QTL GWAS769109 (human)3e-10eosinophil quantity (VT:0002602)blood eosinophil count (CMO:0000033)12110695283110695284Human
1559125SPSL2_HSerum P-selectin level QTL 2 (human)2.59Serum P-selectin level1289897665115897665Human
1298449UAE2_HUrinary albumin excretion QTL 2 (human)20.005Urinary albumin excretionurine albumin:creatinine ratio (ACR)12102836889128836889Human
1643258BW205_HBody weight QTL 205 (human)4.080.00001Body fat amountpercent body fat1296630114122630114Human
1643452BW104_HBody weight QTL 104 (human)1.890.005Body fat amountabdominal visceral12102395874128395874Human
1357361BW37_HBody weight QTL 37 (human)4.080.00001Body fat amount12102836889116423339Human
407332396GWAS981372_Hdiastolic blood pressure QTL GWAS981372 (human)1e-13diastolic blood pressurediastolic blood pressure (CMO:0000005)12110687004110687005Human
407284759GWAS933735_Hbody height QTL GWAS933735 (human)3e-10body height (VT:0001253)body height (CMO:0000106)12110672222110672223Human
407330806GWAS979782_Hvital capacity QTL GWAS979782 (human)0.000003vital capacity12110672222110672223Human
407106260GWAS755236_Herythrocyte count QTL GWAS755236 (human)2e-11erythrocyte countred blood cell count (CMO:0000025)12110672958110672959Human
1643264BW195_HBody weight QTL 195 (human)0.0151Body weightBMI1289897665115897665Human
406992411GWAS641387_Himmunoglobulin isotype switching measurement QTL GWAS641387 (human)1e-09immunoglobulin isotype switching measurement12110688804110688805Human
1357387BW58_HBody weight QTL 58 (human)2.30.0001Body weightfat free mass after exercise training1289438856115438856Human
1358827MULTSCL22_HMultiple sclerosis susceptibility QTL 22 (human)Multiple sclerosis susceptibility1289897665115897665Human
407148507GWAS797483_Hplatelet count QTL GWAS797483 (human)4e-14platelet quantity (VT:0003179)platelet count (CMO:0000029)12110672222110672223Human

Markers in Region
RH68803  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh3712111,087,059 - 111,087,170UniSTSGRCh37
Build 3612109,571,442 - 109,571,553RGDNCBI36
Celera12110,713,887 - 110,713,998RGD
Cytogenetic Map12q24.11UniSTS
HuRef12108,104,765 - 108,104,876UniSTS
GeneMap99-GB4 RH Map12427.17UniSTS
NCBI RH Map12711.2UniSTS


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001040107 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001256413 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_032369 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_005253948 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011538838 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011538839 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011538840 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011538841 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011538842 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011538844 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011538845 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011538846 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011538847 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017020026 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017020027 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_024449225 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047429669 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047429670 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054373470 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054373471 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054373472 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054373473 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054373474 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054373475 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054373476 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054373477 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054373478 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054373479 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054373480 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054373481 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054373482 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054373483 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC144522 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK293543 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AY359054 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC007277 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC009731 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC032672 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BP369986 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BP375483 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH471054 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CP068266 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DB310328 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GU211002 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENST00000242607   ⟹   ENSP00000242607
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl12110,648,686 - 110,689,115 (-)Ensembl
Ensembl Acc Id: ENST00000356742   ⟹   ENSP00000349181
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl12110,648,797 - 110,688,709 (-)Ensembl
Ensembl Acc Id: ENST00000439744   ⟹   ENSP00000412052
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl12110,649,133 - 110,689,778 (-)Ensembl
Ensembl Acc Id: ENST00000546425
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl12110,682,655 - 110,689,819 (-)Ensembl
Ensembl Acc Id: ENST00000546713   ⟹   ENSP00000447227
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl12110,661,235 - 110,704,950 (-)Ensembl
Ensembl Acc Id: ENST00000547887   ⟹   ENSP00000448379
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl12110,651,325 - 110,683,267 (-)Ensembl
Ensembl Acc Id: ENST00000548312   ⟹   ENSP00000449601
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl12110,627,841 - 110,689,417 (-)Ensembl
Ensembl Acc Id: ENST00000549442   ⟹   ENSP00000450106
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl12110,651,218 - 110,689,809 (-)Ensembl
Ensembl Acc Id: ENST00000620084   ⟹   ENSP00000479812
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl12110,648,686 - 110,683,267 (-)Ensembl
RefSeq Acc Id: NM_001040107   ⟹   NP_001035196
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh3812110,648,686 - 110,689,777 (-)NCBI
GRCh3712111,086,491 - 111,130,276 (-)NCBI
Build 3612109,570,874 - 109,612,000 (-)NCBI Archive
HuRef12108,104,197 - 108,145,322 (-)ENTREZGENE
CHM1_112111,054,153 - 111,095,269 (-)NCBI
T2T-CHM13v2.012110,626,380 - 110,667,470 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001256413   ⟹   NP_001243342
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh3812110,648,686 - 110,689,777 (-)NCBI
GRCh3712111,086,491 - 111,130,276 (-)NCBI
HuRef12108,104,197 - 108,145,322 (-)NCBI
CHM1_112111,054,153 - 111,095,269 (-)NCBI
T2T-CHM13v2.012110,626,380 - 110,667,470 (-)NCBI
Sequence:
RefSeq Acc Id: NM_032369   ⟹   NP_115745
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh3812110,648,686 - 110,689,115 (-)NCBI
GRCh3712111,086,491 - 111,130,276 (-)NCBI
Build 3612109,570,874 - 109,611,329 (-)NCBI Archive
HuRef12108,104,197 - 108,145,322 (-)ENTREZGENE
CHM1_112111,054,153 - 111,094,614 (-)NCBI
T2T-CHM13v2.012110,626,380 - 110,666,808 (-)NCBI
Sequence:
RefSeq Acc Id: XM_005253948   ⟹   XP_005254005
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh3812110,648,686 - 110,689,777 (-)NCBI
GRCh3712111,086,491 - 111,130,276 (-)NCBI
Sequence:
RefSeq Acc Id: XM_011538838   ⟹   XP_011537140
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh3812110,648,686 - 110,689,115 (-)NCBI
Sequence:
RefSeq Acc Id: XM_011538839   ⟹   XP_011537141
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh3812110,648,686 - 110,689,777 (-)NCBI
Sequence:
RefSeq Acc Id: XM_011538840   ⟹   XP_011537142
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh3812110,648,686 - 110,689,777 (-)NCBI
Sequence:
RefSeq Acc Id: XM_011538841   ⟹   XP_011537143
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh3812110,648,686 - 110,689,409 (-)NCBI
Sequence:
RefSeq Acc Id: XM_011538842   ⟹   XP_011537144
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh3812110,648,686 - 110,698,718 (-)NCBI
Sequence:
RefSeq Acc Id: XM_011538844   ⟹   XP_011537146
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh3812110,648,686 - 110,689,409 (-)NCBI
Sequence:
RefSeq Acc Id: XM_011538845   ⟹   XP_011537147
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh3812110,648,686 - 110,689,409 (-)NCBI
Sequence:
RefSeq Acc Id: XM_011538846   ⟹   XP_011537148
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh3812110,648,686 - 110,704,952 (-)NCBI
Sequence:
RefSeq Acc Id: XM_011538847   ⟹   XP_011537149
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh3812110,648,686 - 110,699,299 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017020026   ⟹   XP_016875515
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh3812110,648,686 - 110,702,395 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017020027   ⟹   XP_016875516
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh3812110,648,686 - 110,689,409 (-)NCBI
Sequence:
RefSeq Acc Id: XM_024449225   ⟹   XP_024304993
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh3812110,648,686 - 110,698,718 (-)NCBI
Sequence:
RefSeq Acc Id: XM_047429669   ⟹   XP_047285625
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh3812110,648,686 - 110,689,115 (-)NCBI
RefSeq Acc Id: XM_047429670   ⟹   XP_047285626
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh3812110,648,686 - 110,689,115 (-)NCBI
RefSeq Acc Id: XM_054373470   ⟹   XP_054229445
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.012110,626,380 - 110,666,808 (-)NCBI
RefSeq Acc Id: XM_054373471   ⟹   XP_054229446
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.012110,626,380 - 110,667,470 (-)NCBI
RefSeq Acc Id: XM_054373472   ⟹   XP_054229447
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.012110,626,380 - 110,667,135 (-)NCBI
RefSeq Acc Id: XM_054373473   ⟹   XP_054229448
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.012110,626,380 - 110,667,117 (-)NCBI
RefSeq Acc Id: XM_054373474   ⟹   XP_054229449
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.012110,626,380 - 110,667,369 (-)NCBI
RefSeq Acc Id: XM_054373475   ⟹   XP_054229450
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.012110,626,380 - 110,676,383 (-)NCBI
RefSeq Acc Id: XM_054373476   ⟹   XP_054229451
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.012110,626,380 - 110,680,089 (-)NCBI
RefSeq Acc Id: XM_054373477   ⟹   XP_054229452
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.012110,626,380 - 110,667,135 (-)NCBI
RefSeq Acc Id: XM_054373478   ⟹   XP_054229453
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.012110,626,380 - 110,667,129 (-)NCBI
RefSeq Acc Id: XM_054373479   ⟹   XP_054229454
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.012110,626,380 - 110,676,994 (-)NCBI
RefSeq Acc Id: XM_054373480   ⟹   XP_054229455
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.012110,626,380 - 110,666,752 (-)NCBI
RefSeq Acc Id: XM_054373481   ⟹   XP_054229456
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.012110,626,380 - 110,667,392 (-)NCBI
RefSeq Acc Id: XM_054373482   ⟹   XP_054229457
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.012110,626,380 - 110,676,433 (-)NCBI
RefSeq Acc Id: XM_054373483   ⟹   XP_054229458
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.012110,626,380 - 110,682,642 (-)NCBI
Protein Sequences
Protein RefSeqs NP_001035196 (Get FASTA)   NCBI Sequence Viewer  
  NP_001243342 (Get FASTA)   NCBI Sequence Viewer  
  NP_115745 (Get FASTA)   NCBI Sequence Viewer  
  XP_005254005 (Get FASTA)   NCBI Sequence Viewer  
  XP_011537140 (Get FASTA)   NCBI Sequence Viewer  
  XP_011537141 (Get FASTA)   NCBI Sequence Viewer  
  XP_011537142 (Get FASTA)   NCBI Sequence Viewer  
  XP_011537143 (Get FASTA)   NCBI Sequence Viewer  
  XP_011537144 (Get FASTA)   NCBI Sequence Viewer  
  XP_011537146 (Get FASTA)   NCBI Sequence Viewer  
  XP_011537147 (Get FASTA)   NCBI Sequence Viewer  
  XP_011537148 (Get FASTA)   NCBI Sequence Viewer  
  XP_011537149 (Get FASTA)   NCBI Sequence Viewer  
  XP_016875515 (Get FASTA)   NCBI Sequence Viewer  
  XP_016875516 (Get FASTA)   NCBI Sequence Viewer  
  XP_024304993 (Get FASTA)   NCBI Sequence Viewer  
  XP_047285625 (Get FASTA)   NCBI Sequence Viewer  
  XP_047285626 (Get FASTA)   NCBI Sequence Viewer  
  XP_054229445 (Get FASTA)   NCBI Sequence Viewer  
  XP_054229446 (Get FASTA)   NCBI Sequence Viewer  
  XP_054229447 (Get FASTA)   NCBI Sequence Viewer  
  XP_054229448 (Get FASTA)   NCBI Sequence Viewer  
  XP_054229449 (Get FASTA)   NCBI Sequence Viewer  
  XP_054229450 (Get FASTA)   NCBI Sequence Viewer  
  XP_054229451 (Get FASTA)   NCBI Sequence Viewer  
  XP_054229452 (Get FASTA)   NCBI Sequence Viewer  
  XP_054229453 (Get FASTA)   NCBI Sequence Viewer  
  XP_054229454 (Get FASTA)   NCBI Sequence Viewer  
  XP_054229455 (Get FASTA)   NCBI Sequence Viewer  
  XP_054229456 (Get FASTA)   NCBI Sequence Viewer  
  XP_054229457 (Get FASTA)   NCBI Sequence Viewer  
  XP_054229458 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAH07277 (Get FASTA)   NCBI Sequence Viewer  
  AAH09731 (Get FASTA)   NCBI Sequence Viewer  
  AAH32672 (Get FASTA)   NCBI Sequence Viewer  
  AAQ89413 (Get FASTA)   NCBI Sequence Viewer  
  ADA61023 (Get FASTA)   NCBI Sequence Viewer  
  BAG57024 (Get FASTA)   NCBI Sequence Viewer  
  EAW97933 (Get FASTA)   NCBI Sequence Viewer  
  EAW97934 (Get FASTA)   NCBI Sequence Viewer  
  EAW97935 (Get FASTA)   NCBI Sequence Viewer  
  EAW97936 (Get FASTA)   NCBI Sequence Viewer  
  EAW97937 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSP00000242607
  ENSP00000242607.8
  ENSP00000349181.5
  ENSP00000412052
  ENSP00000412052.2
  ENSP00000447227.1
  ENSP00000448379.1
  ENSP00000449601
  ENSP00000449601.1
  ENSP00000450106.2
  ENSP00000479812.1
GenBank Protein Q96D96 (Get FASTA)   NCBI Sequence Viewer  
RefSeq Acc Id: NP_001035196   ⟸   NM_001040107
- Peptide Label: isoform 1
- UniProtKB: Q6UW11 (UniProtKB/Swiss-Prot),   F8WCH5 (UniProtKB/Swiss-Prot),   B4DEB3 (UniProtKB/Swiss-Prot),   A8MQ37 (UniProtKB/Swiss-Prot),   Q96IS5 (UniProtKB/Swiss-Prot),   Q96D96 (UniProtKB/Swiss-Prot),   D2KFF9 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_115745   ⟸   NM_032369
- Peptide Label: isoform 1
- UniProtKB: Q6UW11 (UniProtKB/Swiss-Prot),   F8WCH5 (UniProtKB/Swiss-Prot),   B4DEB3 (UniProtKB/Swiss-Prot),   A8MQ37 (UniProtKB/Swiss-Prot),   Q96IS5 (UniProtKB/Swiss-Prot),   Q96D96 (UniProtKB/Swiss-Prot),   D2KFF9 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001243342   ⟸   NM_001256413
- Peptide Label: isoform 2
- UniProtKB: D2KFF9 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_005254005   ⟸   XM_005253948
- Peptide Label: isoform X2
- UniProtKB: Q6UW11 (UniProtKB/Swiss-Prot),   F8WCH5 (UniProtKB/Swiss-Prot),   B4DEB3 (UniProtKB/Swiss-Prot),   A8MQ37 (UniProtKB/Swiss-Prot),   Q96IS5 (UniProtKB/Swiss-Prot),   Q96D96 (UniProtKB/Swiss-Prot),   D2KFF9 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_011537148   ⟸   XM_011538846
- Peptide Label: isoform X2
- UniProtKB: Q6UW11 (UniProtKB/Swiss-Prot),   F8WCH5 (UniProtKB/Swiss-Prot),   B4DEB3 (UniProtKB/Swiss-Prot),   A8MQ37 (UniProtKB/Swiss-Prot),   Q96IS5 (UniProtKB/Swiss-Prot),   Q96D96 (UniProtKB/Swiss-Prot),   D2KFF9 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_011537149   ⟸   XM_011538847
- Peptide Label: isoform X2
- UniProtKB: Q6UW11 (UniProtKB/Swiss-Prot),   F8WCH5 (UniProtKB/Swiss-Prot),   B4DEB3 (UniProtKB/Swiss-Prot),   A8MQ37 (UniProtKB/Swiss-Prot),   Q96IS5 (UniProtKB/Swiss-Prot),   Q96D96 (UniProtKB/Swiss-Prot),   D2KFF9 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_011537144   ⟸   XM_011538842
- Peptide Label: isoform X1
- UniProtKB: D2KFF9 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_011537141   ⟸   XM_011538839
- Peptide Label: isoform X1
- UniProtKB: D2KFF9 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_011537142   ⟸   XM_011538840
- Peptide Label: isoform X1
- UniProtKB: D2KFF9 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_011537140   ⟸   XM_011538838
- Peptide Label: isoform X1
- UniProtKB: D2KFF9 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_011537147   ⟸   XM_011538845
- Peptide Label: isoform X2
- UniProtKB: Q6UW11 (UniProtKB/Swiss-Prot),   F8WCH5 (UniProtKB/Swiss-Prot),   B4DEB3 (UniProtKB/Swiss-Prot),   A8MQ37 (UniProtKB/Swiss-Prot),   Q96IS5 (UniProtKB/Swiss-Prot),   Q96D96 (UniProtKB/Swiss-Prot),   D2KFF9 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_011537146   ⟸   XM_011538844
- Peptide Label: isoform X1
- UniProtKB: D2KFF9 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_011537143   ⟸   XM_011538841
- Peptide Label: isoform X1
- UniProtKB: D2KFF9 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_016875515   ⟸   XM_017020026
- Peptide Label: isoform X1
- UniProtKB: D2KFF9 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_016875516   ⟸   XM_017020027
- Peptide Label: isoform X2
- UniProtKB: Q6UW11 (UniProtKB/Swiss-Prot),   F8WCH5 (UniProtKB/Swiss-Prot),   B4DEB3 (UniProtKB/Swiss-Prot),   A8MQ37 (UniProtKB/Swiss-Prot),   Q96IS5 (UniProtKB/Swiss-Prot),   Q96D96 (UniProtKB/Swiss-Prot),   D2KFF9 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_024304993   ⟸   XM_024449225
- Peptide Label: isoform X2
- UniProtKB: Q96D96 (UniProtKB/Swiss-Prot),   Q6UW11 (UniProtKB/Swiss-Prot),   F8WCH5 (UniProtKB/Swiss-Prot),   B4DEB3 (UniProtKB/Swiss-Prot),   A8MQ37 (UniProtKB/Swiss-Prot),   Q96IS5 (UniProtKB/Swiss-Prot),   D2KFF9 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSP00000479812   ⟸   ENST00000620084
Ensembl Acc Id: ENSP00000412052   ⟸   ENST00000439744
Ensembl Acc Id: ENSP00000242607   ⟸   ENST00000242607
Ensembl Acc Id: ENSP00000447227   ⟸   ENST00000546713
Ensembl Acc Id: ENSP00000448379   ⟸   ENST00000547887
Ensembl Acc Id: ENSP00000449601   ⟸   ENST00000548312
Ensembl Acc Id: ENSP00000450106   ⟸   ENST00000549442
Ensembl Acc Id: ENSP00000349181   ⟸   ENST00000356742
RefSeq Acc Id: XP_047285626   ⟸   XM_047429670
- Peptide Label: isoform X2
- UniProtKB: Q96D96 (UniProtKB/Swiss-Prot),   Q6UW11 (UniProtKB/Swiss-Prot),   F8WCH5 (UniProtKB/Swiss-Prot),   B4DEB3 (UniProtKB/Swiss-Prot),   A8MQ37 (UniProtKB/Swiss-Prot),   Q96IS5 (UniProtKB/Swiss-Prot),   D2KFF9 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_047285625   ⟸   XM_047429669
- Peptide Label: isoform X1
- UniProtKB: D2KFF9 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_054229458   ⟸   XM_054373483
- Peptide Label: isoform X2
- UniProtKB: Q96D96 (UniProtKB/Swiss-Prot),   Q6UW11 (UniProtKB/Swiss-Prot),   F8WCH5 (UniProtKB/Swiss-Prot),   B4DEB3 (UniProtKB/Swiss-Prot),   A8MQ37 (UniProtKB/Swiss-Prot),   Q96IS5 (UniProtKB/Swiss-Prot),   D2KFF9 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_054229451   ⟸   XM_054373476
- Peptide Label: isoform X1
- UniProtKB: D2KFF9 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_054229454   ⟸   XM_054373479
- Peptide Label: isoform X2
- UniProtKB: Q96D96 (UniProtKB/Swiss-Prot),   Q6UW11 (UniProtKB/Swiss-Prot),   F8WCH5 (UniProtKB/Swiss-Prot),   B4DEB3 (UniProtKB/Swiss-Prot),   A8MQ37 (UniProtKB/Swiss-Prot),   Q96IS5 (UniProtKB/Swiss-Prot),   D2KFF9 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_054229457   ⟸   XM_054373482
- Peptide Label: isoform X2
- UniProtKB: Q96D96 (UniProtKB/Swiss-Prot),   Q6UW11 (UniProtKB/Swiss-Prot),   F8WCH5 (UniProtKB/Swiss-Prot),   B4DEB3 (UniProtKB/Swiss-Prot),   A8MQ37 (UniProtKB/Swiss-Prot),   Q96IS5 (UniProtKB/Swiss-Prot),   D2KFF9 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_054229450   ⟸   XM_054373475
- Peptide Label: isoform X1
- UniProtKB: D2KFF9 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_054229446   ⟸   XM_054373471
- Peptide Label: isoform X1
- UniProtKB: D2KFF9 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_054229456   ⟸   XM_054373481
- Peptide Label: isoform X2
- UniProtKB: Q96D96 (UniProtKB/Swiss-Prot),   Q6UW11 (UniProtKB/Swiss-Prot),   F8WCH5 (UniProtKB/Swiss-Prot),   B4DEB3 (UniProtKB/Swiss-Prot),   A8MQ37 (UniProtKB/Swiss-Prot),   Q96IS5 (UniProtKB/Swiss-Prot),   D2KFF9 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_054229449   ⟸   XM_054373474
- Peptide Label: isoform X1
- UniProtKB: D2KFF9 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_054229452   ⟸   XM_054373477
- Peptide Label: isoform X2
- UniProtKB: Q96D96 (UniProtKB/Swiss-Prot),   Q6UW11 (UniProtKB/Swiss-Prot),   F8WCH5 (UniProtKB/Swiss-Prot),   B4DEB3 (UniProtKB/Swiss-Prot),   A8MQ37 (UniProtKB/Swiss-Prot),   Q96IS5 (UniProtKB/Swiss-Prot),   D2KFF9 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_054229447   ⟸   XM_054373472
- Peptide Label: isoform X1
- UniProtKB: D2KFF9 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_054229453   ⟸   XM_054373478
- Peptide Label: isoform X2
- UniProtKB: Q96D96 (UniProtKB/Swiss-Prot),   Q6UW11 (UniProtKB/Swiss-Prot),   F8WCH5 (UniProtKB/Swiss-Prot),   B4DEB3 (UniProtKB/Swiss-Prot),   A8MQ37 (UniProtKB/Swiss-Prot),   Q96IS5 (UniProtKB/Swiss-Prot),   D2KFF9 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_054229448   ⟸   XM_054373473
- Peptide Label: isoform X1
- UniProtKB: D2KFF9 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_054229445   ⟸   XM_054373470
- Peptide Label: isoform X1
- UniProtKB: D2KFF9 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_054229455   ⟸   XM_054373480
- Peptide Label: isoform X2
- UniProtKB: Q96D96 (UniProtKB/Swiss-Prot),   Q6UW11 (UniProtKB/Swiss-Prot),   F8WCH5 (UniProtKB/Swiss-Prot),   B4DEB3 (UniProtKB/Swiss-Prot),   A8MQ37 (UniProtKB/Swiss-Prot),   Q96IS5 (UniProtKB/Swiss-Prot),   D2KFF9 (UniProtKB/TrEMBL)
Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q96D96-F1-model_v2 AlphaFold Q96D96 1-273 view protein structure

Promoters
RGD ID:6810299
Promoter ID:HG_ACW:18851
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Lymphoblastoid,   NB4
Transcripts:HVCN1.FAPR07
Position:
Human AssemblyChrPosition (strand)Source
Build 3612109,583,476 - 109,583,976 (-)MPROMDB
RGD ID:6789932
Promoter ID:HG_KWN:16666
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Lymphoblastoid
Transcripts:ENST00000242607
Position:
Human AssemblyChrPosition (strand)Source
Build 3612109,584,636 - 109,585,352 (-)MPROMDB
RGD ID:6810297
Promoter ID:HG_ACW:18853
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:K562
Transcripts:HVCN1.DAPR07
Position:
Human AssemblyChrPosition (strand)Source
Build 3612109,599,321 - 109,599,821 (-)MPROMDB
RGD ID:6789934
Promoter ID:HG_KWN:16667
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Lymphoblastoid
Transcripts:ENST00000377649
Position:
Human AssemblyChrPosition (strand)Source
Build 3612109,602,376 - 109,603,327 (-)MPROMDB
RGD ID:6790121
Promoter ID:HG_KWN:16668
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Lymphoblastoid
Transcripts:ENST00000356742
Position:
Human AssemblyChrPosition (strand)Source
Build 3612109,605,026 - 109,605,526 (-)MPROMDB
RGD ID:6790122
Promoter ID:HG_KWN:16669
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:CD4+TCell_12Hour,   Jurkat,   K562,   Lymphoblastoid,   NB4
Transcripts:NM_001040107,   NM_032369,   UC001TRQ.1
Position:
Human AssemblyChrPosition (strand)Source
Build 3612109,611,326 - 109,611,997 (-)MPROMDB
RGD ID:7225411
Promoter ID:EPDNEW_H18451
Type:initiation region
Name:HVCN1_1
Description:hydrogen voltage gated channel 1
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Human AssemblyChrPosition (strand)Source
GRCh3812110,689,115 - 110,689,175EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene HGNC:28240 AgrOrtholog
COSMIC HVCN1 COSMIC
Ensembl Genes ENSG00000122986 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENST00000242607 ENTREZGENE
  ENST00000242607.13 UniProtKB/Swiss-Prot
  ENST00000356742.9 UniProtKB/Swiss-Prot
  ENST00000439744 ENTREZGENE
  ENST00000439744.6 UniProtKB/Swiss-Prot
  ENST00000546713.5 UniProtKB/TrEMBL
  ENST00000547887.1 UniProtKB/TrEMBL
  ENST00000548312 ENTREZGENE
  ENST00000548312.5 UniProtKB/Swiss-Prot
  ENST00000549442.5 UniProtKB/TrEMBL
  ENST00000620084.4 UniProtKB/Swiss-Prot
Gene3D-CATH 1.20.120.350 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  1.20.5.170 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
GTEx ENSG00000122986 GTEx
HGNC ID HGNC:28240 ENTREZGENE
Human Proteome Map HVCN1 Human Proteome Map
InterPro Hvcn1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Ion_trans_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  VGPC1_C UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Volt_channel_dom_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report hsa:84329 UniProtKB/Swiss-Prot
NCBI Gene 84329 ENTREZGENE
OMIM 611227 OMIM
PANTHER PTHR46480 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  VOLTAGE-GATED HYDROGEN CHANNEL 1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam Ion_trans UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  VGPC1_C UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PharmGKB PA144596422 PharmGKB
Superfamily-SCOP Voltage-gated potassium channels UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt A8MQ37 ENTREZGENE
  B4DEB3 ENTREZGENE
  D2KFF9 ENTREZGENE, UniProtKB/TrEMBL
  F8VPF7_HUMAN UniProtKB/TrEMBL
  F8VS40_HUMAN UniProtKB/TrEMBL
  F8W0B3_HUMAN UniProtKB/TrEMBL
  F8WCH5 ENTREZGENE
  HVCN1_HUMAN UniProtKB/Swiss-Prot
  Q6UW11 ENTREZGENE
  Q96D96 ENTREZGENE
  Q96IS5 ENTREZGENE
UniProt Secondary A8MQ37 UniProtKB/Swiss-Prot
  B4DEB3 UniProtKB/Swiss-Prot
  F8WCH5 UniProtKB/Swiss-Prot
  Q6UW11 UniProtKB/Swiss-Prot
  Q96IS5 UniProtKB/Swiss-Prot


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2015-01-20 HVCN1  hydrogen voltage gated channel 1    hydrogen voltage-gated channel 1  Symbol and/or name change 5135510 APPROVED