PSD3 (pleckstrin and Sec7 domain containing 3) - Rat Genome Database

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Gene: PSD3 (pleckstrin and Sec7 domain containing 3) Homo sapiens
Analyze
Symbol: PSD3
Name: pleckstrin and Sec7 domain containing 3
RGD ID: 1603689
HGNC Page HGNC:19093
Description: Predicted to enable guanyl-nucleotide exchange factor activity and phospholipid binding activity. Predicted to be involved in regulation of ARF protein signal transduction. Predicted to be located in membrane. Predicted to be active in glutamatergic synapse; postsynapse; and ruffle membrane.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: ADP-ribosylation factor guanine nucleotide factor 6; DKFZp761K1423; EFA6D; EFA6R; epididymis tissue protein Li 20mP; exchange factor for ADP-ribosylation factor guanine nucleotide factor 6; exchange factor for ADP-ribosylation factor guanine nucleotide factor 6 D; exchange factor for ARF6 D; HCA67; hepatocellular carcinoma-associated antigen 67; PH and SEC7 domain-containing protein 3; pleckstrin homology and SEC7 domain-containing protein 3
RGD Orthologs
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Allele / Splice: See ClinVar data
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38818,527,303 - 19,084,805 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl818,527,303 - 19,084,730 (-)EnsemblGRCh38hg38GRCh38
GRCh37818,384,813 - 18,942,315 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36818,429,093 - 18,915,476 (-)NCBINCBI36Build 36hg18NCBI36
Celera817,351,147 - 17,835,744 (-)NCBICelera
Cytogenetic Map8p22NCBI
HuRef816,929,317 - 17,412,683 (-)NCBIHuRef
CHM1_1818,586,292 - 19,072,714 (-)NCBICHM1_1
T2T-CHM13v2.0818,794,850 - 19,349,609 (-)NCBIT2T-CHM13v2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(+)-schisandrin B  (ISO)
(-)-demecolcine  (EXP)
(1->4)-beta-D-glucan  (ISO)
1,1-dichloroethene  (ISO)
1,2-dichloroethane  (ISO)
1,2-dimethylhydrazine  (ISO)
17alpha-ethynylestradiol  (ISO)
17beta-estradiol  (EXP,ISO)
17beta-hydroxy-5alpha-androstan-3-one  (EXP)
2,2',4,4',5,5'-hexachlorobiphenyl  (EXP,ISO)
2,2',5,5'-tetrachlorobiphenyl  (ISO)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2,3,7,8-Tetrachlorodibenzofuran  (ISO)
4,4'-sulfonyldiphenol  (EXP,ISO)
4-hydroxyphenyl retinamide  (ISO)
6-propyl-2-thiouracil  (ISO)
aflatoxin B1  (EXP)
Aflatoxin B2 alpha  (EXP)
all-trans-retinoic acid  (EXP)
aristolochic acid A  (EXP)
arsane  (EXP)
arsenic atom  (EXP)
arsenite(3-)  (EXP)
arsenous acid  (EXP)
benzo[a]pyrene  (EXP,ISO)
benzo[a]pyrene diol epoxide I  (EXP)
bis(2-ethylhexyl) phthalate  (EXP)
bisphenol A  (EXP,ISO)
caffeine  (EXP)
camptothecin  (EXP)
carbon nanotube  (ISO)
CGP 52608  (EXP)
chlorpyrifos  (ISO)
cisplatin  (EXP)
cobalt dichloride  (ISO)
coenzyme Q10  (EXP)
copper(II) sulfate  (EXP)
coumestrol  (EXP)
cyclosporin A  (EXP)
cytarabine  (EXP)
diarsenic trioxide  (EXP)
diethylstilbestrol  (EXP)
dioxygen  (ISO)
dorsomorphin  (EXP)
endosulfan  (ISO)
ethanol  (ISO)
folic acid  (ISO)
formaldehyde  (EXP)
FR900359  (EXP)
fulvestrant  (EXP)
glyphosate  (ISO)
hydralazine  (EXP)
indole-3-methanol  (ISO)
lipopolysaccharide  (EXP)
manganese(II) chloride  (ISO)
melphalan  (EXP)
methamphetamine  (EXP,ISO)
methoxychlor  (ISO)
mocetinostat  (EXP)
N,N-diethyl-m-toluamide  (ISO)
N-nitrosodiethylamine  (ISO)
nickel atom  (EXP)
nickel sulfate  (EXP)
paracetamol  (EXP,ISO)
PCB138  (ISO)
perfluorooctane-1-sulfonic acid  (ISO)
permethrin  (ISO)
phenylmercury acetate  (EXP)
progesterone  (EXP)
quercetin  (EXP)
SB 431542  (EXP)
silver atom  (ISO)
silver(0)  (ISO)
sodium arsenite  (EXP)
sotorasib  (EXP)
sunitinib  (EXP)
tacedinaline  (EXP)
tamoxifen  (ISO)
tert-butyl hydroperoxide  (EXP)
tetrachloromethane  (ISO)
trametinib  (EXP)
trichostatin A  (EXP)
triphenyl phosphate  (EXP,ISO)
valproic acid  (EXP,ISO)
vincristine  (EXP)

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

Molecular Pathway Annotations     Click to see Annotation Detail View
Phenotype Annotations     Click to see Annotation Detail View

Human Phenotype
References

References - curated
# Reference Title Reference Citation
1. KEGG Annotation Import Pipeline Pipeline to import KEGG annotations from KEGG into RGD
2. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
3. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:10231032   PMID:12097419   PMID:12168954   PMID:12477932   PMID:14702039   PMID:15489334   PMID:16270321   PMID:16344560   PMID:17148452   PMID:18649358   PMID:20080650   PMID:20379614  
PMID:20736409   PMID:21275903   PMID:21507922   PMID:21873635   PMID:23251661   PMID:23284306   PMID:23776197   PMID:24023788   PMID:24595857   PMID:25296758   PMID:25447205   PMID:27880917  
PMID:28237857   PMID:29395067   PMID:29507755   PMID:30639242   PMID:31010829   PMID:31871319   PMID:33957083   PMID:33961781   PMID:34079125   PMID:35102341   PMID:35271311   PMID:35384245  
PMID:36215168   PMID:36897256   PMID:36931259   PMID:36976175   PMID:37232246   PMID:38117590   PMID:38803224   PMID:39231216   PMID:39422127  


Genomics

Comparative Map Data
PSD3
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38818,527,303 - 19,084,805 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl818,527,303 - 19,084,730 (-)EnsemblGRCh38hg38GRCh38
GRCh37818,384,813 - 18,942,315 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36818,429,093 - 18,915,476 (-)NCBINCBI36Build 36hg18NCBI36
Celera817,351,147 - 17,835,744 (-)NCBICelera
Cytogenetic Map8p22NCBI
HuRef816,929,317 - 17,412,683 (-)NCBIHuRef
CHM1_1818,586,292 - 19,072,714 (-)NCBICHM1_1
T2T-CHM13v2.0818,794,850 - 19,349,609 (-)NCBIT2T-CHM13v2.0
Psd3
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39868,141,728 - 68,664,740 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl868,141,734 - 68,664,679 (-)EnsemblGRCm39 Ensembl
GRCm38867,689,082 - 68,212,063 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl867,689,082 - 68,212,027 (-)EnsemblGRCm38mm10GRCm38
MGSCv37870,212,981 - 70,498,473 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36870,625,036 - 70,903,563 (-)NCBIMGSCv36mm8
Celera870,232,989 - 70,519,004 (-)NCBICelera
Cytogenetic Map8B3.2- B3.3NCBI
cM Map833.46NCBI
Psd3
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81626,238,595 - 26,802,535 (+)NCBIGRCr8
mRatBN7.21621,465,643 - 22,035,846 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1621,465,639 - 22,034,547 (+)EnsemblmRatBN7.2 Ensembl
Rnor_6.01623,212,165 - 23,789,414 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1623,447,366 - 23,781,604 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01623,099,943 - 23,673,970 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41623,194,137 - 23,662,010 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera1621,624,379 - 22,176,442 (+)NCBICelera
Cytogenetic Map16p14NCBI
Psd3
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495540342,451,485 - 42,932,948 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495540342,442,708 - 42,943,314 (-)NCBIChiLan1.0ChiLan1.0
PSD3
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2737,011,500 - 37,725,363 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1812,736,722 - 13,464,979 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0817,758,287 - 18,308,876 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1814,706,850 - 15,259,170 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl814,714,575 - 15,258,823 (-)Ensemblpanpan1.1panPan2
PSD3
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11621,328,491 - 21,921,378 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1621,336,642 - 21,921,460 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1621,835,321 - 22,427,295 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01623,062,751 - 23,661,573 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1623,062,752 - 23,661,465 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11621,428,758 - 21,945,684 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01622,014,238 - 22,733,274 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01622,064,528 - 22,658,581 (-)NCBIUU_Cfam_GSD_1.0
Psd3
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494315,250,693 - 15,615,297 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365552,963,963 - 3,284,619 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365552,955,982 - 3,253,064 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
PSD3
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1712,758,536 - 13,264,174 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11712,645,743 - 13,267,176 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21713,573,794 - 14,045,089 (+)NCBISscrofa10.2Sscrofa10.2susScr3
PSD3
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1816,623,640 - 17,171,820 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl816,628,787 - 17,098,824 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366605225,081,275 - 25,637,066 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Psd3
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462475814,483,447 - 14,793,268 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462475814,474,626 - 14,965,281 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in PSD3
91 total Variants

Clinical Variants
Name Type Condition(s) Position(s) Clinical significance
GRCh38/hg38 8p23.1-11.21(chr8:12609975-42085703)x3 copy number gain See cases [RCV000050294] Chr8:12609975..42085703 [GRCh38]
Chr8:12467484..41943221 [GRCh37]
Chr8:12511855..42062378 [NCBI36]
Chr8:8p23.1-11.21
pathogenic
GRCh38/hg38 8p23.3-21.1(chr8:2475295-27504279)x1 copy number loss See cases [RCV000050297] Chr8:2475295..27504279 [GRCh38]
Chr8:2292235..27361796 [GRCh37]
Chr8:2121457..27417713 [NCBI36]
Chr8:8p23.3-21.1
pathogenic
GRCh38/hg38 8p23.1-11.1(chr8:12728904-43673207)x3 copy number gain See cases [RCV000050912] Chr8:12728904..43673207 [GRCh38]
Chr8:12586413..43528350 [GRCh37]
Chr8:12630784..43647507 [NCBI36]
Chr8:8p23.1-11.1
pathogenic
GRCh38/hg38 8p23.1-12(chr8:12383584-36370018)x3 copy number gain See cases [RCV000051145] Chr8:12383584..36370018 [GRCh38]
Chr8:12241093..36227536 [GRCh37]
Chr8:12285464..36347088 [NCBI36]
Chr8:8p23.1-12
pathogenic
GRCh38/hg38 8p23.3-q24.3(chr8:241530-145049449)x3 copy number gain See cases [RCV000051206] Chr8:241530..145049449 [GRCh38]
Chr8:191530..146274835 [GRCh37]
Chr8:181530..146245639 [NCBI36]
Chr8:8p23.3-q24.3
pathogenic
GRCh38/hg38 8p23.1-11.21(chr8:12728904-41928741)x3 copy number gain See cases [RCV000051110] Chr8:12728904..41928741 [GRCh38]
Chr8:12586413..41786259 [GRCh37]
Chr8:12630784..41905416 [NCBI36]
Chr8:8p23.1-11.21
pathogenic
GRCh38/hg38 8p23.1-11.23(chr8:12609975-37892000)x3 copy number gain See cases [RCV000053629] Chr8:12609975..37892000 [GRCh38]
Chr8:12467484..37749518 [GRCh37]
Chr8:12511855..37868676 [NCBI36]
Chr8:8p23.1-11.23
pathogenic
GRCh38/hg38 8p23.1-11.1(chr8:12609975-43336172)x3 copy number gain See cases [RCV000053630] Chr8:12609975..43336172 [GRCh38]
Chr8:12467484..43191315 [GRCh37]
Chr8:12511855..43310472 [NCBI36]
Chr8:8p23.1-11.1
pathogenic
GRCh38/hg38 8p23.1-11.1(chr8:12609975-43255410)x3 copy number gain Developmental Delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000053631]|Developmental delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000053631]|See cases [RCV000053631] Chr8:12609975..43255410 [GRCh38]
Chr8:12467484..43110553 [GRCh37]
Chr8:12511855..43229710 [NCBI36]
Chr8:8p23.1-11.1
pathogenic
GRCh38/hg38 8p23.1-11.1(chr8:12750796-43532444)x3 copy number gain See cases [RCV000053632] Chr8:12750796..43532444 [GRCh38]
Chr8:12608305..43387587 [GRCh37]
Chr8:12652676..43506744 [NCBI36]
Chr8:8p23.1-11.1
pathogenic
GRCh38/hg38 8p23.1-12(chr8:12750796-29445409)x3 copy number gain See cases [RCV000053633] Chr8:12750796..29445409 [GRCh38]
Chr8:12608305..29302926 [GRCh37]
Chr8:12652676..29358845 [NCBI36]
Chr8:8p23.1-12
pathogenic
GRCh38/hg38 8p23.1-21.3(chr8:12787272-20952389)x3 copy number gain See cases [RCV000053634] Chr8:12787272..20952389 [GRCh38]
Chr8:12644781..20809900 [GRCh37]
Chr8:12689152..20854180 [NCBI36]
Chr8:8p23.1-21.3
pathogenic
GRCh38/hg38 8p22-q11.21(chr8:14940110-47929925)x3 copy number gain See cases [RCV000053635] Chr8:14940110..47929925 [GRCh38]
Chr8:14797619..48842485 [GRCh37]
Chr8:14841990..49005038 [NCBI36]
Chr8:8p22-q11.21
pathogenic
GRCh38/hg38 8p23.3-q24.3(chr8:244417-145054775)x3 copy number gain Developmental Delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000053604]|Developmental delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000053604]|See cases [RCV000053604] Chr8:244417..145054775 [GRCh38]
Chr8:194417..146280161 [GRCh37]
Chr8:184417..146250965 [NCBI36]
Chr8:8p23.3-q24.3
pathogenic
GRCh38/hg38 8p23.3-12(chr8:96310-30614703)x3 copy number gain See cases [RCV000053599] Chr8:96310..30614703 [GRCh38]
Chr8:46310..30472220 [GRCh37]
Chr8:36310..30591762 [NCBI36]
Chr8:8p23.3-12
pathogenic
GRCh38/hg38 8p23.3-q24.3(chr8:241530-145054634)x3 copy number gain See cases [RCV000053602] Chr8:241530..145054634 [GRCh38]
Chr8:191530..146280020 [GRCh37]
Chr8:181530..146250824 [NCBI36]
Chr8:8p23.3-q24.3
pathogenic
NM_015310.3(PSD3):c.2217-393A>G single nucleotide variant Lung cancer [RCV000107257] Chr8:18633199 [GRCh38]
Chr8:18490709 [GRCh37]
Chr8:8p22
uncertain significance
GRCh38/hg38 8p23.1-21.3(chr8:12732530-20436882)x3 copy number gain See cases [RCV000135294] Chr8:12732530..20436882 [GRCh38]
Chr8:12590039..20294393 [GRCh37]
Chr8:12634410..20338673 [NCBI36]
Chr8:8p23.1-21.3
pathogenic
GRCh38/hg38 8p22-21.3(chr8:18988335-19599269)x3 copy number gain See cases [RCV000135831] Chr8:18988335..19599269 [GRCh38]
Chr8:18845845..19456780 [GRCh37]
Chr8:18890125..19501060 [NCBI36]
Chr8:8p22-21.3
benign
GRCh38/hg38 8p23.1-11.1(chr8:12609975-43673207)x3 copy number gain See cases [RCV000135786] Chr8:12609975..43673207 [GRCh38]
Chr8:12467484..43528350 [GRCh37]
Chr8:12511855..43647507 [NCBI36]
Chr8:8p23.1-11.1
pathogenic
GRCh38/hg38 8p23.1-11.1(chr8:12383584-43673207)x3 copy number gain See cases [RCV000135566] Chr8:12383584..43673207 [GRCh38]
Chr8:12241093..43528350 [GRCh37]
Chr8:12285464..43647507 [NCBI36]
Chr8:8p23.1-11.1
pathogenic
GRCh38/hg38 8p23.1-11.21(chr8:12728904-40169194)x3 copy number gain See cases [RCV000136516] Chr8:12728904..40169194 [GRCh38]
Chr8:12586413..40026713 [GRCh37]
Chr8:12630784..40145870 [NCBI36]
Chr8:8p23.1-11.21
pathogenic
GRCh38/hg38 8p23.3-21.3(chr8:241530-23198398)x3 copy number gain See cases [RCV000135967] Chr8:241530..23198398 [GRCh38]
Chr8:191530..23055911 [GRCh37]
Chr8:181530..23111856 [NCBI36]
Chr8:8p23.3-21.3
pathogenic
GRCh38/hg38 8p23.3-21.2(chr8:241605-24656971)x3 copy number gain See cases [RCV000136026] Chr8:241605..24656971 [GRCh38]
Chr8:191605..24514484 [GRCh37]
Chr8:181605..24570374 [NCBI36]
Chr8:8p23.3-21.2
pathogenic
GRCh38/hg38 8p23.1-12(chr8:12725750-30180521)x3 copy number gain See cases [RCV000136825] Chr8:12725750..30180521 [GRCh38]
Chr8:12583259..30038037 [GRCh37]
Chr8:12627630..30157579 [NCBI36]
Chr8:8p23.1-12
pathogenic
GRCh38/hg38 8p22(chr8:18081979-18646740)x3 copy number gain See cases [RCV000137325] Chr8:18081979..18646740 [GRCh38]
Chr8:17939488..18504250 [GRCh37]
Chr8:17983768..18548530 [NCBI36]
Chr8:8p22
likely pathogenic|uncertain significance
GRCh38/hg38 8p23.1-11.1(chr8:12182421-43673207)x3 copy number gain See cases [RCV000137249] Chr8:12182421..43673207 [GRCh38]
Chr8:12039930..43528350 [GRCh37]
Chr8:12077339..43647507 [NCBI36]
Chr8:8p23.1-11.1
pathogenic
GRCh38/hg38 8p23.1-12(chr8:12698495-35476082)x3 copy number gain See cases [RCV000138058] Chr8:12698495..35476082 [GRCh38]
Chr8:12556004..35333600 [GRCh37]
Chr8:12600375..35453142 [NCBI36]
Chr8:8p23.1-12
pathogenic
GRCh38/hg38 8p23.3-11.23(chr8:226452-38021728)x3 copy number gain See cases [RCV000137807] Chr8:226452..38021728 [GRCh38]
Chr8:176452..37879246 [GRCh37]
Chr8:166452..37998403 [NCBI36]
Chr8:8p23.3-11.23
pathogenic|likely pathogenic
GRCh38/hg38 8p23.3-12(chr8:241605-31091074)x3 copy number gain See cases [RCV000138831] Chr8:241605..31091074 [GRCh38]
Chr8:191605..30948590 [GRCh37]
Chr8:181605..31068132 [NCBI36]
Chr8:8p23.3-12
pathogenic
GRCh38/hg38 8p22(chr8:18626254-18884550)x1 copy number loss See cases [RCV000138676] Chr8:18626254..18884550 [GRCh38]
Chr8:18483764..18742060 [GRCh37]
Chr8:18528044..18786340 [NCBI36]
Chr8:8p22
uncertain significance
GRCh38/hg38 8p23.3-q24.3(chr8:241605-145054781)x3 copy number gain See cases [RCV000138643] Chr8:241605..145054781 [GRCh38]
Chr8:191605..146280167 [GRCh37]
Chr8:181605..146250971 [NCBI36]
Chr8:8p23.3-q24.3
pathogenic
GRCh38/hg38 8p23.1-21.1(chr8:12382844-28625564)x3 copy number gain See cases [RCV000138244] Chr8:12382844..28625564 [GRCh38]
Chr8:12240353..28483081 [GRCh37]
Chr8:12284724..28539000 [NCBI36]
Chr8:8p23.1-21.1
pathogenic
GRCh38/hg38 8p22(chr8:18930349-19081676)x3 copy number gain See cases [RCV000139071] Chr8:18930349..19081676 [GRCh38]
Chr8:18787859..18939186 [GRCh37]
Chr8:18832139..18983466 [NCBI36]
Chr8:8p22
likely benign
GRCh38/hg38 8p23.1-11.22(chr8:7141697-38695546)x3 copy number gain See cases [RCV000139891] Chr8:7141697..38695546 [GRCh38]
Chr8:6999219..38553064 [GRCh37]
Chr8:6986629..38672221 [NCBI36]
Chr8:8p23.1-11.22
pathogenic
GRCh38/hg38 8p23.1-11.22(chr8:12729023-39235934)x3 copy number gain See cases [RCV000139770] Chr8:12729023..39235934 [GRCh38]
Chr8:12586532..39093453 [GRCh37]
Chr8:12630903..39212610 [NCBI36]
Chr8:8p23.1-11.22
pathogenic
GRCh38/hg38 8p23.1-11.1(chr8:12646123-43686843)x3 copy number gain See cases [RCV000139796] Chr8:12646123..43686843 [GRCh38]
Chr8:12503632..43541986 [GRCh37]
Chr8:12548003..43661143 [NCBI36]
Chr8:8p23.1-11.1
pathogenic
GRCh38/hg38 8p23.1-11.23(chr8:11851113-37216333)x3 copy number gain See cases [RCV000139549] Chr8:11851113..37216333 [GRCh38]
Chr8:11708622..37073851 [GRCh37]
Chr8:11746031..37193009 [NCBI36]
Chr8:8p23.1-11.23
pathogenic
GRCh38/hg38 8p22-21.3(chr8:18727799-19351154)x3 copy number gain See cases [RCV000139721] Chr8:18727799..19351154 [GRCh38]
Chr8:18585309..19208665 [GRCh37]
Chr8:18629589..19252945 [NCBI36]
Chr8:8p22-21.3
uncertain significance
GRCh38/hg38 8p23.3-12(chr8:226452-34491890)x3 copy number gain See cases [RCV000141410] Chr8:226452..34491890 [GRCh38]
Chr8:176452..34349408 [GRCh37]
Chr8:166452..34468950 [NCBI36]
Chr8:8p23.3-12
pathogenic
GRCh38/hg38 8p23.3-q24.3(chr8:208048-145070385)x3 copy number gain See cases [RCV000141808] Chr8:208048..145070385 [GRCh38]
Chr8:158048..146295771 [GRCh37]
Chr8:148048..146266575 [NCBI36]
Chr8:8p23.3-q24.3
pathogenic
GRCh38/hg38 8p22-21.3(chr8:18852451-19355561)x3 copy number gain See cases [RCV000142194] Chr8:18852451..19355561 [GRCh38]
Chr8:18709961..19213072 [GRCh37]
Chr8:18754241..19257352 [NCBI36]
Chr8:8p22-21.3
uncertain significance
GRCh38/hg38 8p23.3-q24.3(chr8:226452-145068712)x3 copy number gain See cases [RCV000142858] Chr8:226452..145068712 [GRCh38]
Chr8:176452..146294098 [GRCh37]
Chr8:166452..146264902 [NCBI36]
Chr8:8p23.3-q24.3
pathogenic
GRCh38/hg38 8p23.1-12(chr8:12383584-29033946)x1 copy number loss See cases [RCV000142516] Chr8:12383584..29033946 [GRCh38]
Chr8:12241093..28891463 [GRCh37]
Chr8:12285464..28947382 [NCBI36]
Chr8:8p23.1-12
pathogenic
GRCh38/hg38 8p22-12(chr8:18972996-33619264)x1 copy number loss See cases [RCV000142747] Chr8:18972996..33619264 [GRCh38]
Chr8:18830506..33476782 [GRCh37]
Chr8:18874786..33596324 [NCBI36]
Chr8:8p22-12
pathogenic
GRCh38/hg38 8p23.3-q24.3(chr8:241530-145054634)x3 copy number gain See cases [RCV000148092] Chr8:241530..145054634 [GRCh38]
Chr8:191530..146280020 [GRCh37]
Chr8:181530..146250824 [NCBI36]
Chr8:8p23.3-q24.3
pathogenic
GRCh38/hg38 8p23.1-11.21(chr8:12633490-40685533)x3 copy number gain See cases [RCV000143508] Chr8:12633490..40685533 [GRCh38]
Chr8:12490999..40543052 [GRCh37]
Chr8:12535370..40662209 [NCBI36]
Chr8:8p23.1-11.21
pathogenic
GRCh38/hg38 8p23.1-11.21(chr8:12609975-42085703)x3 copy number gain See cases [RCV000148249] Chr8:12609975..42085703 [GRCh38]
Chr8:12467484..41943221 [GRCh37]
Chr8:12511855..42062378 [NCBI36]
Chr8:8p23.1-11.21
pathogenic
GRCh38/hg38 8p23.1-11.1(chr8:12728904-43673207)x3 copy number gain See cases [RCV000148237] Chr8:12728904..43673207 [GRCh38]
Chr8:12586413..43528350 [GRCh37]
Chr8:12630784..43647507 [NCBI36]
Chr8:8p23.1-11.1
pathogenic
GRCh38/hg38 8p23.2-21.1(chr8:2475295-27504279)x1 copy number loss See cases [RCV000148252] Chr8:2475295..27504279 [GRCh38]
Chr8:2292235..27361796 [GRCh37]
Chr8:2121457..27417713 [NCBI36]
Chr8:8p23.2-21.1
pathogenic
GRCh37/hg19 8p22(chr8:17793168-18457910)x3 copy number gain Breast ductal adenocarcinoma [RCV000207316] Chr8:17793168..18457910 [GRCh37]
Chr8:8p22
uncertain significance
GRCh37/hg19 8p23.1-11.22(chr8:12528482-39593802)x3 copy number gain See cases [RCV000511325] Chr8:12528482..39593802 [GRCh37]
Chr8:8p23.1-11.22
pathogenic
GRCh37/hg19 8p23.1-21.2(chr8:12580132-26774307)x3 copy number gain See cases [RCV000239945] Chr8:12580132..26774307 [GRCh37]
Chr8:8p23.1-21.2
pathogenic
Single allele complex 8p inverted duplication/deletion syndrome [RCV002280753] Chr8:158048..43019304 [GRCh37]
Chr8:8p23.3-11.21
pathogenic
GRCh37/hg19 8p23.1-21.2(chr8:12580104-25947329) copy number gain Autism [RCV000626542] Chr8:12580104..25947329 [GRCh37]
Chr8:8p23.1-21.2
pathogenic
Single allele duplication not provided [RCV000768452] Chr8:12546855..35816855 [GRCh37]
Chr8:8p23.1-12
likely pathogenic
GRCh37/hg19 8p23.3-12(chr8:158048-30262760)x3 copy number gain See cases [RCV000449225] Chr8:158048..30262760 [GRCh37]
Chr8:8p23.3-12
pathogenic
GRCh37/hg19 8p22-21.3(chr8:15935542-19321304)x3 copy number gain See cases [RCV000446821] Chr8:15935542..19321304 [GRCh37]
Chr8:8p22-21.3
uncertain significance
GRCh37/hg19 8p22-21.3(chr8:18770061-19709425)x3 copy number gain See cases [RCV000447250] Chr8:18770061..19709425 [GRCh37]
Chr8:8p22-21.3
likely benign
GRCh37/hg19 8p22-21.2(chr8:13091530-24483615) copy number loss See cases [RCV000447428] Chr8:13091530..24483615 [GRCh37]
Chr8:8p22-21.2
pathogenic
GRCh37/hg19 8p23.3-q24.3(chr8:158991-146280828)x3 copy number gain See cases [RCV000447507] Chr8:158991..146280828 [GRCh37]
Chr8:8p23.3-q24.3
pathogenic
GRCh37/hg19 8p23.3-11.1(chr8:158048-43786723)x3 copy number gain See cases [RCV000447909] Chr8:158048..43786723 [GRCh37]
Chr8:8p23.3-11.1
pathogenic
GRCh37/hg19 8p23.1-11.1(chr8:12580132-43388233)x3 copy number gain See cases [RCV000447913] Chr8:12580132..43388233 [GRCh37]
Chr8:8p23.1-11.1
pathogenic
GRCh37/hg19 8p22(chr8:18725030-18888257)x3 copy number gain See cases [RCV000448474] Chr8:18725030..18888257 [GRCh37]
Chr8:8p22
uncertain significance
GRCh37/hg19 8p23.1-22(chr8:11935023-18814062)x3 copy number gain See cases [RCV000510447] Chr8:11935023..18814062 [GRCh37]
Chr8:8p23.1-22
likely pathogenic
GRCh37/hg19 8p22-12(chr8:16992973-32612724)x1 copy number loss not provided [RCV000509389] Chr8:16992973..32612724 [GRCh37]
Chr8:8p22-12
not provided
GRCh37/hg19 8p23.3-q24.3(chr8:158049-146295771) copy number gain See cases [RCV000510234] Chr8:158049..146295771 [GRCh37]
Chr8:8p23.3-q24.3
pathogenic
GRCh37/hg19 8p23.1-12(chr8:12528482-33684786)x3 copy number gain See cases [RCV000510571] Chr8:12528482..33684786 [GRCh37]
Chr8:8p23.1-12
pathogenic
GRCh37/hg19 8p22-21.3(chr8:18845744-19594010)x3 copy number gain See cases [RCV000511789] Chr8:18845744..19594010 [GRCh37]
Chr8:8p22-21.3
uncertain significance
GRCh37/hg19 8p23.1-11.1(chr8:11935023-43824035)x3 copy number gain See cases [RCV000511028] Chr8:11935023..43824035 [GRCh37]
Chr8:8p23.1-11.1
pathogenic
GRCh37/hg19 8p23.1-12(chr8:11945855-34875355)x3 copy number gain See cases [RCV000510899] Chr8:11945855..34875355 [GRCh37]
Chr8:8p23.1-12
pathogenic
GRCh37/hg19 8p23.3-q24.3(chr8:158049-146295771)x3 copy number gain See cases [RCV000511095] Chr8:158049..146295771 [GRCh37]
Chr8:8p23.3-q24.3
pathogenic
NM_015310.4(PSD3):c.2008A>G (p.Thr670Ala) single nucleotide variant not specified [RCV004324640] Chr8:18801285 [GRCh38]
Chr8:18658795 [GRCh37]
Chr8:8p22
uncertain significance
NM_015310.4(PSD3):c.1673C>T (p.Ser558Phe) single nucleotide variant not specified [RCV004289981] Chr8:18804860 [GRCh38]
Chr8:18662370 [GRCh37]
Chr8:8p22
uncertain significance
GRCh37/hg19 8p22-21.3(chr8:18831686-19340019)x3 copy number gain See cases [RCV000512389] Chr8:18831686..19340019 [GRCh37]
Chr8:8p22-21.3
uncertain significance
GRCh37/hg19 8p23.1-q24.3(chr8:12490999-146295771)x3 copy number gain See cases [RCV000512169] Chr8:12490999..146295771 [GRCh37]
Chr8:8p23.1-q24.3
pathogenic
GRCh37/hg19 8p22(chr8:18316992-18492779)x1 copy number loss not provided [RCV000682937] Chr8:18316992..18492779 [GRCh37]
Chr8:8p22
likely benign
GRCh37/hg19 8p22(chr8:18539767-18753378)x1 copy number loss not provided [RCV000682946] Chr8:18539767..18753378 [GRCh37]
Chr8:8p22
uncertain significance
GRCh37/hg19 8p23.1-21.2(chr8:8770948-27079636)x3 copy number gain not provided [RCV000683041] Chr8:8770948..27079636 [GRCh37]
Chr8:8p23.1-21.2
pathogenic
GRCh37/hg19 8p23.3-21.2(chr8:1825200-24533193)x3 copy number gain not provided [RCV000683042] Chr8:1825200..24533193 [GRCh37]
Chr8:8p23.3-21.2
pathogenic
GRCh37/hg19 8p22(chr8:18669679-18869618)x1 copy number loss not provided [RCV000682940] Chr8:18669679..18869618 [GRCh37]
Chr8:8p22
uncertain significance
GRCh37/hg19 8p22(chr8:18437638-18543814)x1 copy number loss not provided [RCV000682929] Chr8:18437638..18543814 [GRCh37]
Chr8:8p22
uncertain significance
GRCh37/hg19 8p23.1-12(chr8:12552775-35935825)x3 copy number gain not provided [RCV000683043] Chr8:12552775..35935825 [GRCh37]
Chr8:8p23.1-12
pathogenic
GRCh37/hg19 8p23.3-q24.3(chr8:164984-146293414)x3 copy number gain not provided [RCV000747254] Chr8:164984..146293414 [GRCh37]
Chr8:8p23.3-q24.3
pathogenic
GRCh37/hg19 8p23.3-q24.3(chr8:10213-146293414)x3 copy number gain not provided [RCV000747248] Chr8:10213..146293414 [GRCh37]
Chr8:8p23.3-q24.3
pathogenic
GRCh37/hg19 8p22(chr8:18728941-18749581)x1 copy number loss not provided [RCV000747460] Chr8:18728941..18749581 [GRCh37]
Chr8:8p22
benign
GRCh37/hg19 8p22(chr8:18752593-18996630)x3 copy number gain not provided [RCV000747461] Chr8:18752593..18996630 [GRCh37]
Chr8:8p22
benign
GRCh37/hg19 8p22(chr8:18763357-18996630)x3 copy number gain not provided [RCV000747462] Chr8:18763357..18996630 [GRCh37]
Chr8:8p22
benign
GRCh37/hg19 8p22(chr8:18856363-18858239)x1 copy number loss not provided [RCV000747463] Chr8:18856363..18858239 [GRCh37]
Chr8:8p22
benign
GRCh37/hg19 8p23.1-12(chr8:12556004-34374150)x3 copy number gain not provided [RCV000762735] Chr8:12556004..34374150 [GRCh37]
Chr8:8p23.1-12
likely pathogenic
NM_015310.4(PSD3):c.948C>T (p.Thr316=) single nucleotide variant not provided [RCV000926930] Chr8:18871916 [GRCh38]
Chr8:18729426 [GRCh37]
Chr8:8p22
likely benign
NM_015310.4(PSD3):c.312C>T (p.Leu104=) single nucleotide variant not provided [RCV000893019] Chr8:18872552 [GRCh38]
Chr8:18730062 [GRCh37]
Chr8:8p22
likely benign
NM_015310.4(PSD3):c.1925C>A (p.Ala642Glu) single nucleotide variant not provided [RCV000949737] Chr8:18801368 [GRCh38]
Chr8:18658878 [GRCh37]
Chr8:8p22
benign
NM_015310.4(PSD3):c.441C>T (p.Ser147=) single nucleotide variant not provided [RCV000968888] Chr8:18872423 [GRCh38]
Chr8:18729933 [GRCh37]
Chr8:8p22
benign
GRCh37/hg19 8p22-21.3(chr8:18367759-19510286)x3 copy number gain See cases [RCV000790591] Chr8:18367759..19510286 [GRCh37]
Chr8:8p22-21.3
uncertain significance
NM_015310.4(PSD3):c.419C>T (p.Ala140Val) single nucleotide variant not provided [RCV000962310] Chr8:18872445 [GRCh38]
Chr8:18729955 [GRCh37]
Chr8:8p22
benign
NM_015310.4(PSD3):c.1594A>C (p.Ile532Leu) single nucleotide variant not provided [RCV000901030] Chr8:18867714 [GRCh38]
Chr8:18725224 [GRCh37]
Chr8:8p22
benign
NM_015310.4(PSD3):c.672C>G (p.Asp224Glu) single nucleotide variant not provided [RCV000906586] Chr8:18872192 [GRCh38]
Chr8:18729702 [GRCh37]
Chr8:8p22
benign
NM_015310.4(PSD3):c.2009C>T (p.Thr670Ile) single nucleotide variant not specified [RCV004289075] Chr8:18801284 [GRCh38]
Chr8:18658794 [GRCh37]
Chr8:8p22
uncertain significance
GRCh37/hg19 8p22-21.3(chr8:18753362-19000923)x3 copy number gain not provided [RCV000849500] Chr8:18753362..19000923 [GRCh37]
Chr8:8p22-21.3
uncertain significance
GRCh37/hg19 8p22(chr8:17575940-18443131)x3 copy number gain not provided [RCV000848233] Chr8:17575940..18443131 [GRCh37]
Chr8:8p22
uncertain significance
GRCh37/hg19 8p22(chr8:18749192-18834806)x1 copy number loss not provided [RCV000846045] Chr8:18749192..18834806 [GRCh37]
Chr8:8p22
uncertain significance
GRCh37/hg19 8p22-21.3(chr8:18266233-20864195)x1 copy number loss not provided [RCV000847806] Chr8:18266233..20864195 [GRCh37]
Chr8:8p22-21.3
uncertain significance
NM_015310.4(PSD3):c.2862C>T (p.Pro954=) single nucleotide variant not provided [RCV000892586] Chr8:18556275 [GRCh38]
Chr8:18413785 [GRCh37]
Chr8:8p22
benign
GRCh37/hg19 8p23.3-q24.3(chr8:158048-146295771)x3 copy number gain not provided [RCV000848478] Chr8:158048..146295771 [GRCh37]
Chr8:8p23.3-q24.3
pathogenic
GRCh37/hg19 8p22(chr8:18641302-18669765)x3 copy number gain not provided [RCV000849944] Chr8:18641302..18669765 [GRCh37]
Chr8:8p22
uncertain significance
NM_015310.4(PSD3):c.437T>C (p.Ile146Thr) single nucleotide variant Flexion contracture [RCV001007779] Chr8:18872427 [GRCh38]
Chr8:18729937 [GRCh37]
Chr8:8p22
uncertain significance
NM_015310.4(PSD3):c.3080G>A (p.Arg1027His) single nucleotide variant not specified [RCV004294375] Chr8:18535807 [GRCh38]
Chr8:18393317 [GRCh37]
Chr8:8p22
uncertain significance
NM_015310.4(PSD3):c.2746C>T (p.Arg916Cys) single nucleotide variant not specified [RCV004303710] Chr8:18572566 [GRCh38]
Chr8:18430076 [GRCh37]
Chr8:8p22
uncertain significance
NM_015310.4(PSD3):c.2024A>G (p.Asp675Gly) single nucleotide variant not specified [RCV004299006] Chr8:18799353 [GRCh38]
Chr8:18656863 [GRCh37]
Chr8:8p22
uncertain significance
NM_015310.4(PSD3):c.338A>T (p.Asp113Val) single nucleotide variant PSD3-related disorder [RCV003940539]|not provided [RCV000885986] Chr8:18872526 [GRCh38]
Chr8:18730036 [GRCh37]
Chr8:8p22
likely benign
NM_015310.4(PSD3):c.1261G>T (p.Val421Phe) single nucleotide variant not provided [RCV000974091] Chr8:18868047 [GRCh38]
Chr8:18725557 [GRCh37]
Chr8:8p22
benign
NM_015310.4(PSD3):c.1024C>T (p.Arg342Cys) single nucleotide variant PSD3-related disorder [RCV003935827]|not provided [RCV000954118] Chr8:18871840 [GRCh38]
Chr8:18729350 [GRCh37]
Chr8:8p22
likely benign
NM_015310.4(PSD3):c.1644G>A (p.Gly548=) single nucleotide variant not provided [RCV000956565] Chr8:18804889 [GRCh38]
Chr8:18662399 [GRCh37]
Chr8:8p22
benign
NM_015310.4(PSD3):c.1147C>T (p.Arg383Cys) single nucleotide variant not provided [RCV000956566] Chr8:18871717 [GRCh38]
Chr8:18729227 [GRCh37]
Chr8:8p22
benign
NM_015310.4(PSD3):c.1046G>T (p.Gly349Val) single nucleotide variant not provided [RCV000958132] Chr8:18871818 [GRCh38]
Chr8:18729328 [GRCh37]
Chr8:8p22
benign
GRCh37/hg19 8p22-21.3(chr8:18827276-19340019)x3 copy number gain not provided [RCV001259485] Chr8:18827276..19340019 [GRCh37]
Chr8:8p22-21.3
likely benign
GRCh37/hg19 8p23.1-12(chr8:12528482-29886483)x3 copy number gain not provided [RCV001260030] Chr8:12528482..29886483 [GRCh37]
Chr8:8p23.1-12
likely pathogenic
GRCh37/hg19 8p22(chr8:18729346-18814062)x1 copy number loss not provided [RCV001259480] Chr8:18729346..18814062 [GRCh37]
Chr8:8p22
uncertain significance
GRCh37/hg19 8p22(chr8:17878070-18529463)x3 copy number gain not provided [RCV001259481] Chr8:17878070..18529463 [GRCh37]
Chr8:8p22
uncertain significance
GRCh37/hg19 8p23.3-11.1(chr8:176814-43396776) copy number gain Abnormal fetal cardiovascular morphology [RCV001291977] Chr8:176814..43396776 [GRCh37]
Chr8:8p23.3-11.1
pathogenic
GRCh37/hg19 8p23.3-q24.3(chr8:158048-146295771) copy number gain Polydactyly [RCV002280629] Chr8:158048..146295771 [GRCh37]
Chr8:8p23.3-q24.3
pathogenic
GRCh37/hg19 8p22-21.3(chr8:18444762-19535758)x3 copy number gain not provided [RCV001832880] Chr8:18444762..19535758 [GRCh37]
Chr8:8p22-21.3
uncertain significance
GRCh37/hg19 8p22-21.3(chr8:15935542-19321304) copy number gain not specified [RCV002053754] Chr8:15935542..19321304 [GRCh37]
Chr8:8p22-21.3
uncertain significance
GRCh37/hg19 8p22-21.3(chr8:18753838-19044726)x3 copy number gain not provided [RCV001829239] Chr8:18753838..19044726 [GRCh37]
Chr8:8p22-21.3
uncertain significance
NC_000008.10:g.(?_16850399)_(20112692_?)dup duplication Hereditary spastic paraplegia 53 [RCV003120735] Chr8:16850399..20112692 [GRCh37]
Chr8:8p22-21.3
uncertain significance
NC_000008.10:g.(?_17747877)_(18544453_?)del deletion not provided [RCV001956385] Chr8:17747877..18544453 [GRCh37]
Chr8:8p22
pathogenic
GRCh37/hg19 8p23.3-12(chr8:158048-30187456)x1 copy number loss See cases [RCV002286343] Chr8:158048..30187456 [GRCh37]
Chr8:8p23.3-12
pathogenic
Single allele complex See cases [RCV002292428] Chr8:6999114..11935023 [GRCh37]
Chr8:8p23.3-11.21
pathogenic
GRCh37/hg19 8p22(chr8:18048191-18471418)x3 copy number gain not provided [RCV002474771] Chr8:18048191..18471418 [GRCh37]
Chr8:8p22
uncertain significance
NM_015310.4(PSD3):c.2055G>T (p.Met685Ile) single nucleotide variant not specified [RCV004132926] Chr8:18799322 [GRCh38]
Chr8:18656832 [GRCh37]
Chr8:8p22
uncertain significance
GRCh37/hg19 8p23.3-22(chr8:158049-18936715)x1 copy number loss not provided [RCV002472557] Chr8:158049..18936715 [GRCh37]
Chr8:8p23.3-22
pathogenic
NM_015310.4(PSD3):c.2348C>G (p.Ala783Gly) single nucleotide variant not specified [RCV004219852] Chr8:18632675 [GRCh38]
Chr8:18490185 [GRCh37]
Chr8:8p22
uncertain significance
NM_015310.4(PSD3):c.2105G>T (p.Cys702Phe) single nucleotide variant not specified [RCV004084761] Chr8:18765516 [GRCh38]
Chr8:18623026 [GRCh37]
Chr8:8p22
uncertain significance
NM_015310.4(PSD3):c.2728T>G (p.Ser910Ala) single nucleotide variant not specified [RCV004173495] Chr8:18572584 [GRCh38]
Chr8:18430094 [GRCh37]
Chr8:8p22
uncertain significance
NM_015310.4(PSD3):c.3107G>A (p.Arg1036Gln) single nucleotide variant not specified [RCV004183768] Chr8:18535780 [GRCh38]
Chr8:18393290 [GRCh37]
Chr8:8p22
uncertain significance
NM_015310.4(PSD3):c.3026A>C (p.His1009Pro) single nucleotide variant not specified [RCV004129300] Chr8:18535861 [GRCh38]
Chr8:18393371 [GRCh37]
Chr8:8p22
uncertain significance
NM_015310.4(PSD3):c.3023C>T (p.Ser1008Leu) single nucleotide variant not specified [RCV004080836] Chr8:18535864 [GRCh38]
Chr8:18393374 [GRCh37]
Chr8:8p22
uncertain significance
NM_015310.4(PSD3):c.2794C>A (p.Leu932Met) single nucleotide variant not specified [RCV004246625] Chr8:18556343 [GRCh38]
Chr8:18413853 [GRCh37]
Chr8:8p22
uncertain significance
NM_015310.4(PSD3):c.635G>T (p.Ser212Ile) single nucleotide variant not specified [RCV004218180] Chr8:18872229 [GRCh38]
Chr8:18729739 [GRCh37]
Chr8:8p22
uncertain significance
NM_015310.4(PSD3):c.2014G>A (p.Ala672Thr) single nucleotide variant not specified [RCV004124322] Chr8:18801279 [GRCh38]
Chr8:18658789 [GRCh37]
Chr8:8p22
uncertain significance
NM_015310.4(PSD3):c.2726G>A (p.Gly909Asp) single nucleotide variant not specified [RCV004157499] Chr8:18572586 [GRCh38]
Chr8:18430096 [GRCh37]
Chr8:8p22
uncertain significance
NM_015310.4(PSD3):c.532C>T (p.Arg178Cys) single nucleotide variant not specified [RCV004085738] Chr8:18872332 [GRCh38]
Chr8:18729842 [GRCh37]
Chr8:8p22
uncertain significance
NM_015310.4(PSD3):c.1657C>T (p.Arg553Trp) single nucleotide variant not specified [RCV004165358] Chr8:18804876 [GRCh38]
Chr8:18662386 [GRCh37]
Chr8:8p22
uncertain significance
NM_015310.4(PSD3):c.3047C>T (p.Pro1016Leu) single nucleotide variant not specified [RCV004130779] Chr8:18535840 [GRCh38]
Chr8:18393350 [GRCh37]
Chr8:8p22
uncertain significance
NM_015310.4(PSD3):c.2590G>A (p.Val864Met) single nucleotide variant not specified [RCV004126342] Chr8:18575177 [GRCh38]
Chr8:18432687 [GRCh37]
Chr8:8p22
uncertain significance
NM_015310.4(PSD3):c.2120C>A (p.Ala707Glu) single nucleotide variant not specified [RCV004152382] Chr8:18765501 [GRCh38]
Chr8:18623011 [GRCh37]
Chr8:8p22
uncertain significance
NM_015310.4(PSD3):c.1388C>T (p.Thr463Ile) single nucleotide variant not specified [RCV004122435] Chr8:18867920 [GRCh38]
Chr8:18725430 [GRCh37]
Chr8:8p22
uncertain significance
NM_015310.4(PSD3):c.3050A>C (p.Asp1017Ala) single nucleotide variant not specified [RCV004100021] Chr8:18535837 [GRCh38]
Chr8:18393347 [GRCh37]
Chr8:8p22
uncertain significance
NM_015310.4(PSD3):c.2833G>A (p.Glu945Lys) single nucleotide variant not specified [RCV004210246] Chr8:18556304 [GRCh38]
Chr8:18413814 [GRCh37]
Chr8:8p22
uncertain significance
NM_015310.4(PSD3):c.496G>T (p.Val166Phe) single nucleotide variant not specified [RCV004099572] Chr8:18872368 [GRCh38]
Chr8:18729878 [GRCh37]
Chr8:8p22
uncertain significance
NM_015310.4(PSD3):c.2297G>A (p.Arg766His) single nucleotide variant not specified [RCV004208323] Chr8:18632726 [GRCh38]
Chr8:18490236 [GRCh37]
Chr8:8p22
uncertain significance
NM_015310.4(PSD3):c.2558C>G (p.Ser853Cys) single nucleotide variant not specified [RCV004132043] Chr8:18575209 [GRCh38]
Chr8:18432719 [GRCh37]
Chr8:8p22
uncertain significance
NM_015310.4(PSD3):c.1631G>A (p.Gly544Glu) single nucleotide variant not specified [RCV004095970] Chr8:18867677 [GRCh38]
Chr8:18725187 [GRCh37]
Chr8:8p22
uncertain significance
NM_015310.4(PSD3):c.2755C>G (p.Leu919Val) single nucleotide variant not specified [RCV004155088] Chr8:18572557 [GRCh38]
Chr8:18430067 [GRCh37]
Chr8:8p22
uncertain significance
NM_015310.4(PSD3):c.2125C>G (p.Leu709Val) single nucleotide variant not specified [RCV004176528] Chr8:18765496 [GRCh38]
Chr8:18623006 [GRCh37]
Chr8:8p22
uncertain significance
NC_000008.10:g.(?_17915043)_(20112692_?)dup duplication not provided [RCV003154902] Chr8:17915043..20112692 [GRCh37]
Chr8:8p22-21.3
uncertain significance
NM_015310.4(PSD3):c.2326G>A (p.Asp776Asn) single nucleotide variant not specified [RCV004260287] Chr8:18632697 [GRCh38]
Chr8:18490207 [GRCh37]
Chr8:8p22
uncertain significance
NM_015310.4(PSD3):c.2161G>T (p.Asp721Tyr) single nucleotide variant not specified [RCV004270714] Chr8:18765460 [GRCh38]
Chr8:18622970 [GRCh37]
Chr8:8p22
uncertain significance
GRCh38/hg38 8p23.3-21.2(chr8:449893-23854904)x1 copy number loss Neurodevelopmental disorder [RCV003327729] Chr8:449893..23854904 [GRCh38]
Chr8:8p23.3-21.2
pathogenic
GRCh38/hg38 8p23.1-12(chr8:12721809-30183737)x1 copy number loss Microcephaly [RCV003327707] Chr8:12721809..30183737 [GRCh38]
Chr8:8p23.1-12
pathogenic
NM_015310.4(PSD3):c.1714G>A (p.Glu572Lys) single nucleotide variant not specified [RCV004344770] Chr8:18804819 [GRCh38]
Chr8:18662329 [GRCh37]
Chr8:8p22
uncertain significance
GRCh37/hg19 8p22(chr8:17782821-18519318)x3 copy number gain not provided [RCV003484728] Chr8:17782821..18519318 [GRCh37]
Chr8:8p22
uncertain significance
GRCh37/hg19 8p22(chr8:18502293-18603518)x1 copy number loss not provided [RCV003483019] Chr8:18502293..18603518 [GRCh37]
Chr8:8p22
uncertain significance
Single allele duplication not provided [RCV003448693] Chr8:12530550..43483193 [GRCh37]
Chr8:8p23.1-11.1
pathogenic
GRCh37/hg19 8p23.2-11.21(chr8:2201405-41723095)x3 copy number gain not provided [RCV003484713] Chr8:2201405..41723095 [GRCh37]
Chr8:8p23.2-11.21
pathogenic
GRCh37/hg19 8p23.1-11.23(chr8:11945856-37902453)x3 copy number gain not provided [RCV003484722] Chr8:11945856..37902453 [GRCh37]
Chr8:8p23.1-11.23
pathogenic
GRCh37/hg19 8p22(chr8:18572341-18814398)x1 copy number loss not provided [RCV003483020] Chr8:18572341..18814398 [GRCh37]
Chr8:8p22
uncertain significance
GRCh37/hg19 8p23.1-11.22(chr8:12560782-38748763)x3 copy number gain not provided [RCV003484724] Chr8:12560782..38748763 [GRCh37]
Chr8:8p23.1-11.22
pathogenic
GRCh37/hg19 8p22-11.1(chr8:14240573-43824035)x3 copy number gain not provided [RCV003484725] Chr8:14240573..43824035 [GRCh37]
Chr8:8p22-11.1
pathogenic
GRCh37/hg19 8p23.1-21.1(chr8:12490999-28150620)x1 copy number loss not provided [RCV003483018] Chr8:12490999..28150620 [GRCh37]
Chr8:8p23.1-21.1
pathogenic
NM_015310.4(PSD3):c.1241T>A (p.Ile414Asn) single nucleotide variant PSD3-related disorder [RCV003405814] Chr8:18868067 [GRCh38]
Chr8:18725577 [GRCh37]
Chr8:8p22
uncertain significance
NM_015310.4(PSD3):c.2387A>G (p.His796Arg) single nucleotide variant PSD3-related disorder [RCV003391264] Chr8:18632636 [GRCh38]
Chr8:18490146 [GRCh37]
Chr8:8p22
uncertain significance
NM_015310.4(PSD3):c.1173A>G (p.Glu391=) single nucleotide variant not provided [RCV003436782] Chr8:18871691 [GRCh38]
Chr8:18729201 [GRCh37]
Chr8:8p22
likely benign
GRCh37/hg19 8p23.3-11.21(chr8:158048-41600696)x3 copy number gain not specified [RCV003986756] Chr8:158048..41600696 [GRCh37]
Chr8:8p23.3-11.21
pathogenic
GRCh37/hg19 8p23.3-q24.3(chr8:158048-146295771)x3 copy number gain not specified [RCV003986742] Chr8:158048..146295771 [GRCh37]
Chr8:8p23.3-q24.3
pathogenic
NM_015310.4(PSD3):c.196A>G (p.Met66Val) single nucleotide variant not specified [RCV004513064] Chr8:18872668 [GRCh38]
Chr8:18730178 [GRCh37]
Chr8:8p22
uncertain significance
NM_015310.4(PSD3):c.2606C>G (p.Thr869Ser) single nucleotide variant not specified [RCV004513067] Chr8:18575161 [GRCh38]
Chr8:18432671 [GRCh37]
Chr8:8p22
uncertain significance
NM_015310.4(PSD3):c.2647G>A (p.Glu883Lys) single nucleotide variant not specified [RCV004513068] Chr8:18572665 [GRCh38]
Chr8:18430175 [GRCh37]
Chr8:8p22
uncertain significance
NM_015310.4(PSD3):c.781C>T (p.His261Tyr) single nucleotide variant not specified [RCV004513071] Chr8:18872083 [GRCh38]
Chr8:18729593 [GRCh37]
Chr8:8p22
uncertain significance
NM_015310.4(PSD3):c.1712C>A (p.Pro571Gln) single nucleotide variant not specified [RCV004513063] Chr8:18804821 [GRCh38]
Chr8:18662331 [GRCh37]
Chr8:8p22
uncertain significance
NM_015310.4(PSD3):c.2255C>G (p.Thr752Ser) single nucleotide variant not specified [RCV004513065] Chr8:18632768 [GRCh38]
Chr8:18490278 [GRCh37]
Chr8:8p22
uncertain significance
NM_015310.4(PSD3):c.2489A>C (p.Tyr830Ser) single nucleotide variant not specified [RCV004513066] Chr8:18575278 [GRCh38]
Chr8:18432788 [GRCh37]
Chr8:8p22
uncertain significance
NM_015310.4(PSD3):c.1565C>T (p.Thr522Ile) single nucleotide variant PSD3-related disorder [RCV003934470] Chr8:18867743 [GRCh38]
Chr8:18725253 [GRCh37]
Chr8:8p22
likely benign
NM_015310.4(PSD3):c.2823G>T (p.Gln941His) single nucleotide variant not specified [RCV004513069] Chr8:18556314 [GRCh38]
Chr8:18413824 [GRCh37]
Chr8:8p22
uncertain significance
NM_015310.4(PSD3):c.3001G>A (p.Glu1001Lys) single nucleotide variant not specified [RCV004513070] Chr8:18535886 [GRCh38]
Chr8:18393396 [GRCh37]
Chr8:8p22
uncertain significance
NM_015310.4(PSD3):c.2041A>G (p.Thr681Ala) single nucleotide variant not specified [RCV004666731] Chr8:18799336 [GRCh38]
Chr8:18656846 [GRCh37]
Chr8:8p22
uncertain significance
NM_015310.4(PSD3):c.2228A>C (p.Glu743Ala) single nucleotide variant not specified [RCV004657638] Chr8:18632795 [GRCh38]
Chr8:18490305 [GRCh37]
Chr8:8p22
uncertain significance
NM_015310.4(PSD3):c.2327A>G (p.Asp776Gly) single nucleotide variant not specified [RCV004657640] Chr8:18632696 [GRCh38]
Chr8:18490206 [GRCh37]
Chr8:8p22
uncertain significance
NM_015310.4(PSD3):c.1705G>C (p.Glu569Gln) single nucleotide variant not specified [RCV004657641] Chr8:18804828 [GRCh38]
Chr8:18662338 [GRCh37]
Chr8:8p22
uncertain significance
NM_015310.4(PSD3):c.1931C>G (p.Ser644Cys) single nucleotide variant not specified [RCV004657642] Chr8:18801362 [GRCh38]
Chr8:18658872 [GRCh37]
Chr8:8p22
uncertain significance
NC_000008.10:g.(?_17915043)_(20112692_?)del deletion not provided [RCV004583317] Chr8:17915043..20112692 [GRCh37]
Chr8:8p22-21.3
pathogenic
NM_015310.4(PSD3):c.2659G>A (p.Gly887Arg) single nucleotide variant not specified [RCV004666730] Chr8:18572653 [GRCh38]
Chr8:18430163 [GRCh37]
Chr8:8p22
uncertain significance
GRCh37/hg19 8p23.3-21.2(chr8:158049-24812752)x1 copy number loss not provided [RCV004819357] Chr8:158049..24812752 [GRCh37]
Chr8:8p23.3-21.2
pathogenic
NM_015310.4(PSD3):c.3065C>G (p.Thr1022Ser) single nucleotide variant not specified [RCV004851618] Chr8:18535822 [GRCh38]
Chr8:18393332 [GRCh37]
Chr8:8p22
uncertain significance
NM_015310.4(PSD3):c.2849G>A (p.Arg950His) single nucleotide variant not specified [RCV004851619] Chr8:18556288 [GRCh38]
Chr8:18413798 [GRCh37]
Chr8:8p22
uncertain significance
NM_015310.4(PSD3):c.2548G>A (p.Ala850Thr) single nucleotide variant not specified [RCV004851620] Chr8:18575219 [GRCh38]
Chr8:18432729 [GRCh37]
Chr8:8p22
uncertain significance
NM_015310.4(PSD3):c.2129A>G (p.Gln710Arg) single nucleotide variant not specified [RCV004851621] Chr8:18765492 [GRCh38]
Chr8:18623002 [GRCh37]
Chr8:8p22
uncertain significance
NM_015310.4(PSD3):c.2717C>G (p.Ala906Gly) single nucleotide variant not specified [RCV004851622] Chr8:18572595 [GRCh38]
Chr8:18430105 [GRCh37]
Chr8:8p22
uncertain significance
NM_015310.4(PSD3):c.1872T>G (p.Phe624Leu) single nucleotide variant not specified [RCV004851623] Chr8:18804560 [GRCh38]
Chr8:18662070 [GRCh37]
Chr8:8p22
uncertain significance
NM_015310.4(PSD3):c.2074C>T (p.His692Tyr) single nucleotide variant not specified [RCV004851624] Chr8:18799303 [GRCh38]
Chr8:18656813 [GRCh37]
Chr8:8p22
uncertain significance
NM_015310.4(PSD3):c.2305A>T (p.Ser769Cys) single nucleotide variant not specified [RCV004851625] Chr8:18632718 [GRCh38]
Chr8:18490228 [GRCh37]
Chr8:8p22
uncertain significance
NM_015310.4(PSD3):c.1771C>T (p.Arg591Cys) single nucleotide variant not specified [RCV004851617] Chr8:18804762 [GRCh38]
Chr8:18662272 [GRCh37]
Chr8:8p22
uncertain significance
NM_015310.4(PSD3):c.1804G>A (p.Asp602Asn) single nucleotide variant not specified [RCV004851626] Chr8:18804729 [GRCh38]
Chr8:18662239 [GRCh37]
Chr8:8p22
uncertain significance
miRNA Target Status (No longer updated)

Predicted Target Of
Summary Value
Count of predictions:13811
Count of miRNA genes:1417
Interacting mature miRNAs:1892
Transcripts:ENST00000286485, ENST00000327040, ENST00000428502, ENST00000440756, ENST00000517971, ENST00000518303, ENST00000518315, ENST00000518963, ENST00000519633, ENST00000519653, ENST00000519851, ENST00000520789, ENST00000520858, ENST00000521027, ENST00000521475, ENST00000521841, ENST00000521878, ENST00000523619
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCh38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
596982421GWAS1101940_Hmemory performance QTL GWAS1101940 (human)0.000009memory performance81862226618622267Human
597338906GWAS1434980_Hsevere acute respiratory syndrome, COVID-19 QTL GWAS1434980 (human)3e-22severe acute respiratory syndrome, COVID-1981862698818626989Human
597184281GWAS1280355_Hbreast cancer QTL GWAS1280355 (human)9e-13breast cancer81860093618600937Human
406970693GWAS619669_Herythrocyte cadmium measurement QTL GWAS619669 (human)0.000008erythrocyte cadmium measurement81875510218755103Human
406952388GWAS601364_Hparental longevity QTL GWAS601364 (human)0.000004total life span (VT:0001661)81871640918716410Human
597620889GWAS1677749_Hkeratoconus QTL GWAS1677749 (human)4e-12keratoconus81904642019046421Human
597022237GWAS1118311_Hinterleukin 12 measurement QTL GWAS1118311 (human)0.000008interleukin 12 measurement81873483018734832Human
597091998GWAS1188072_Hcognitive decline measurement QTL GWAS1188072 (human)0.000005cognitive behavior trait (VT:0010450)81894717618947177Human
597315091GWAS1411165_Hbody mass index QTL GWAS1411165 (human)0.000006body mass indexbody mass index (BMI) (CMO:0000105)81873925218739253Human
597192850GWAS1288924_Hmemory performance QTL GWAS1288924 (human)0.000009memory performance81863645218636453Human
596982430GWAS1101949_Hmemory performance QTL GWAS1101949 (human)0.00001memory performance81861630718616308Human
596981272GWAS1100791_Hmemory performance QTL GWAS1100791 (human)0.000001memory performance81863614218636143Human
597192855GWAS1288929_Hmemory performance QTL GWAS1288929 (human)0.000009memory performance81863614218636143Human
596982426GWAS1101945_Hmemory performance QTL GWAS1101945 (human)0.000009memory performance81863639318636394Human
597323274GWAS1419348_Hschizophrenia QTL GWAS1419348 (human)7e-09schizophrenia81855034818550349Human
597043334GWAS1139408_Hschizophrenia QTL GWAS1139408 (human)2e-08schizophrenia81858484118584842Human
597409033GWAS1505107_Hretinal vasculature measurement QTL GWAS1505107 (human)2e-09retina blood vessel morphology trait (VT:0002792)81908406519084066Human
596982150GWAS1101669_Hmemory performance QTL GWAS1101669 (human)0.000008memory performance81863725418637255Human
596980995GWAS1100514_Hmemory performance QTL GWAS1100514 (human)0.000001memory performance81863645218636453Human
406957654GWAS606630_Hforced expiratory volume QTL GWAS606630 (human)0.0000008forced expiratory volumeforced expiratory volume (CMO:0000254)81881622118816222Human
597278592GWAS1374666_Htestosterone measurement QTL GWAS1374666 (human)5e-08testosterone measurementserum testosterone level (CMO:0000568)81897913818979139Human
407049560GWAS698536_Hsuberic acid measurement QTL GWAS698536 (human)0.000004suberic acid measurement81878524718785248Human
597208837GWAS1304911_Hprotein measurement QTL GWAS1304911 (human)9e-14protein measurement81854887218548873Human
597323706GWAS1419780_Heducational attainment QTL GWAS1419780 (human)8e-09educational attainment81856608018566081Human
596981557GWAS1101076_Hmemory performance QTL GWAS1101076 (human)0.000003memory performance81863386618633867Human
1298482BP2_HBlood pressure QTL 2 (human)1.8Blood pressurediastolic8695325632953256Human
596981556GWAS1101075_Hmemory performance QTL GWAS1101075 (human)0.000003memory performance81863813318638134Human
597323707GWAS1419781_Heducational attainment QTL GWAS1419781 (human)0.0000003educational attainment81882711218827113Human
597195194GWAS1291268_Hmemory performance QTL GWAS1291268 (human)0.000003memory performance81862021218620213Human
597195195GWAS1291269_Hmemory performance QTL GWAS1291269 (human)0.00001memory performance81861630718616308Human
596984496GWAS1104015_Hmemory performance QTL GWAS1104015 (human)0.000009memory performance81863614218636143Human
597276732GWAS1372806_HAlzheimer disease, polygenic risk score QTL GWAS1372806 (human)1e-08Alzheimer disease, polygenic risk score81885541018855411Human
596981554GWAS1101073_Hmemory performance QTL GWAS1101073 (human)0.000003memory performance81863585218635853Human
597223216GWAS1319290_Hheel bone mineral density, urate measurement QTL GWAS1319290 (human)9e-11heel bone mineral density, urate measurementblood uric acid level (CMO:0000501)81860939118609392Human
597195188GWAS1291262_Hmemory performance QTL GWAS1291262 (human)0.000003memory performance81863585218635853Human
596981560GWAS1101079_Hmemory performance QTL GWAS1101079 (human)0.000003memory performance81862021218620213Human
597195189GWAS1291263_Hmemory performance QTL GWAS1291263 (human)0.000003memory performance81863813318638134Human
597195190GWAS1291264_Hmemory performance QTL GWAS1291264 (human)0.000003memory performance81863386618633867Human
407306743GWAS955719_Hlymphocyte count QTL GWAS955719 (human)5e-12lymphocyte countblood lymphocyte count (CMO:0000031)81885343118853432Human
597093028GWAS1189102_Hcognitive decline measurement QTL GWAS1189102 (human)0.0000008cognitive behavior trait (VT:0010450)81894717618947177Human
596972704GWAS1092223_Hattempted suicide QTL GWAS1092223 (human)0.000003attempted suicide81887252618872527Human
597212334GWAS1308408_Hschizophrenia QTL GWAS1308408 (human)1e-08schizophrenia81856541318565414Human
1558703SCL6_HSerum cholesterol level QTL 1 (human)1.2Lipid levelHDL cholesterol81246863538468635Human
597259939GWAS1356013_Hschizophrenia QTL GWAS1356013 (human)0.0000007schizophrenia81873882218738823Human
597143593GWAS1239667_Hsevere acute respiratory syndrome, COVID-19 QTL GWAS1239667 (human)0.0000002severe acute respiratory syndrome, COVID-1981862640618626407Human
596984491GWAS1104010_Hmemory performance QTL GWAS1104010 (human)0.000009memory performance81863645218636453Human
597337508GWAS1433582_Hsevere acute respiratory syndrome, COVID-19 QTL GWAS1433582 (human)1e-09severe acute respiratory syndrome, COVID-1981894265318942654Human
596981845GWAS1101364_Hmemory performance QTL GWAS1101364 (human)0.000006memory performance81862237718622378Human
597192664GWAS1288738_Hmemory performance QTL GWAS1288738 (human)0.000004memory performance81863585218635853Human
597077335GWAS1173409_Hsporadic amyotrophic lateral sclerosis, survival time QTL GWAS1173409 (human)0.0000003sporadic amyotrophic lateral sclerosis, survival time81856722118567222Human
596981844GWAS1101363_Hmemory performance QTL GWAS1101363 (human)0.000006memory performance81863572718635728Human
597202650GWAS1298724_Hmemory performance QTL GWAS1298724 (human)0.000009memory performance81863639318636394Human
407082496GWAS731472_Hcocaine use measurement QTL GWAS731472 (human)0.0000002response to cocaine trait (VT:0010718)81854624418546245Human
597274205GWAS1370279_Hschizophrenia QTL GWAS1370279 (human)0.000001schizophrenia81860183318601834Human
597357022GWAS1453096_Hurinary albumin excretion rate, type 1 diabetes mellitus QTL GWAS1453096 (human)0.000004urinary albumin excretion rate, type 1 diabetes mellitusurine albumin excretion rate (CMO:0000757)81906506719065068Human
597336028GWAS1432102_Hsevere acute respiratory syndrome, COVID-19 QTL GWAS1432102 (human)6e-08severe acute respiratory syndrome, COVID-1981863321218633213Human
597202399GWAS1298473_Hmemory performance QTL GWAS1298473 (human)0.000006memory performance81863572718635728Human
597265105GWAS1361179_Hschizophrenia QTL GWAS1361179 (human)0.000004schizophrenia81861422618614227Human
597202642GWAS1298716_Hmemory performance QTL GWAS1298716 (human)0.000008memory performance81863725418637255Human
597167570GWAS1263644_Hattempted suicide QTL GWAS1263644 (human)0.000003attempted suicide81887252618872527Human
597202646GWAS1298720_Hmemory performance QTL GWAS1298720 (human)0.000009memory performance81862226618622267Human
597201110GWAS1297184_Hmemory performance QTL GWAS1297184 (human)0.000001memory performance81863614218636143Human
597072601GWAS1168675_Hschizophrenia QTL GWAS1168675 (human)0.000002schizophrenia81856541318565414Human
597207500GWAS1303574_Hprotein measurement QTL GWAS1303574 (human)3e-08protein measurement81880511518805116Human
597075139GWAS1171213_Hcoronary artery calcification QTL GWAS1171213 (human)0.000005coronary artery calcification81858453918584540Human
597251020GWAS1347094_Hdementia QTL GWAS1347094 (human)0.000001dementia81862101818621019Human
597093454GWAS1189528_Hschizophrenia QTL GWAS1189528 (human)9e-08schizophrenia81855034818550349Human
406972313GWAS621289_Htrait in response to paliperidone, schizophrenia symptom severity measurement QTL GWAS621289 (human)0.000007trait in response to paliperidone, schizophrenia symptom severity measurement81860093618600937Human
597036878GWAS1132952_Hgrey matter volume measurement QTL GWAS1132952 (human)0.000007grey matter volume measurement81899885318998854Human
597210561GWAS1306635_Hprotein measurement QTL GWAS1306635 (human)3e-08protein measurement81901220519012206Human
596951375GWAS1070894_Hdementia QTL GWAS1070894 (human)0.000001dementia81862101818621019Human
597029067GWAS1125141_Hsensory perception of sweet taste QTL GWAS1125141 (human)0.000006sensory perception of sweet taste81864010618640107Human
407005341GWAS654317_Hlongitudinal BMI measurement QTL GWAS654317 (human)0.000007longitudinal BMI measurementbody mass index (BMI) (CMO:0000105)81887043918870440Human
596980469GWAS1099988_Hmemory performance QTL GWAS1099988 (human)0.000004memory performance81863585218635853Human
597271673GWAS1367747_Hmagnesium measurement, trait in response to platinum QTL GWAS1367747 (human)0.000005magnesium measurement, trait in response to platinumserum magnesium level (CMO:0000541)81871595418715955Human
407078306GWAS727282_Hcocaine use measurement QTL GWAS727282 (human)0.0000007response to cocaine trait (VT:0010718)81854624418546245Human
597200881GWAS1296955_Hmemory performance QTL GWAS1296955 (human)0.000001memory performance81863645218636453Human
597101927GWAS1198001_Hcognitive function measurement QTL GWAS1198001 (human)0.0000009cognitive behavior trait (VT:0010450)81861163618611637Human
597252584GWAS1348658_Hschizophrenia QTL GWAS1348658 (human)3e-08schizophrenia81855034818550349Human
597437160GWAS1533234_HN1-methyladenosine measurement QTL GWAS1533234 (human)0.000001N1-methyladenosine measurement81873338218733383Human
597215598GWAS1311672_Hschizophrenia QTL GWAS1311672 (human)0.000009schizophrenia81856541318565414Human
597202400GWAS1298474_Hmemory performance QTL GWAS1298474 (human)0.000006memory performance81862237718622378Human
597379937GWAS1476011_Hneutrophil count QTL GWAS1476011 (human)0.000004neutrophil quantity (VT:0000222)blood neutrophil count (CMO:0000030)81892453718924538Human
597158125GWAS1254199_HIGA glomerulonephritis QTL GWAS1254199 (human)0.00001IGA glomerulonephritis81899052418990525Human
597368416GWAS1464490_Hglucose measurement QTL GWAS1464490 (human)9e-08glucose measurementblood glucose level (CMO:0000046)81877481618774817Human
406970942GWAS619918_Htrait in response to paliperidone, schizophrenia symptom severity measurement QTL GWAS619918 (human)0.000006trait in response to paliperidone, schizophrenia symptom severity measurement81860093618600937Human

Markers in Region
SHGC-24261  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37818,656,750 - 18,656,872UniSTSGRCh37
Build 36818,701,030 - 18,701,152RGDNCBI36
Celera817,621,304 - 17,621,426RGD
Cytogenetic Map8p21.3UniSTS
HuRef817,198,277 - 17,198,399UniSTS
GeneMap99-G3 RH Map8914.0UniSTS
G17274  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37818,692,583 - 18,692,855UniSTSGRCh37
Build 36818,736,863 - 18,737,135RGDNCBI36
Celera817,657,146 - 17,657,418RGD
Cytogenetic Map8p21.3UniSTS
HuRef817,234,123 - 17,234,395UniSTS
G20566  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37818,388,285 - 18,388,493UniSTSGRCh37
Build 36818,432,565 - 18,432,773RGDNCBI36
Celera817,354,619 - 17,354,827RGD
Cytogenetic Map8p21.3UniSTS
HuRef816,932,789 - 16,932,997UniSTS
A005X11  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37818,388,285 - 18,388,493UniSTSGRCh37
Build 36818,432,565 - 18,432,773RGDNCBI36
Celera817,354,619 - 17,354,827RGD
Cytogenetic Map8p21.3UniSTS
HuRef816,932,789 - 16,932,997UniSTS
GeneMap99-GB4 RH Map879.27UniSTS
NCBI RH Map8210.7UniSTS
RH98309  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37818,656,750 - 18,656,870UniSTSGRCh37
Build 36818,701,030 - 18,701,150RGDNCBI36
Celera817,621,304 - 17,621,424RGD
Cytogenetic Map8p21.3UniSTS
HuRef817,198,277 - 17,198,397UniSTS
GeneMap99-GB4 RH Map879.69UniSTS
RH80712  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37818,393,207 - 18,393,444UniSTSGRCh37
Build 36818,437,487 - 18,437,724RGDNCBI36
Celera817,359,543 - 17,359,780RGD
Cytogenetic Map8p21.3UniSTS
HuRef816,937,716 - 16,937,953UniSTS
GeneMap99-GB4 RH Map865.7UniSTS
SHGC-81254  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37818,515,580 - 18,515,861UniSTSGRCh37
Build 36818,559,860 - 18,560,141RGDNCBI36
Celera817,480,160 - 17,480,441RGD
Cytogenetic Map8p21.3UniSTS
HuRef817,058,272 - 17,058,553UniSTS
RH120071  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37818,657,032 - 18,657,361UniSTSGRCh37
Build 36818,701,312 - 18,701,641RGDNCBI36
Celera817,621,585 - 17,621,914RGD
Cytogenetic Map8p21.3UniSTS
HuRef817,198,558 - 17,198,887UniSTS
G63025  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37818,518,582 - 18,518,855UniSTSGRCh37
Build 36818,562,862 - 18,563,135RGDNCBI36
Celera817,483,162 - 17,483,435RGD
Cytogenetic Map8p21.3UniSTS
HuRef817,061,275 - 17,061,548UniSTS
G63580  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37818,552,367 - 18,552,649UniSTSGRCh37
Build 36818,596,647 - 18,596,929RGDNCBI36
Celera817,516,908 - 17,517,190RGD
Cytogenetic Map8p21.3UniSTS
HuRef817,094,878 - 17,095,160UniSTS
D8S297E  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37818,392,134 - 18,392,200UniSTSGRCh37
Build 36818,436,414 - 18,436,480RGDNCBI36
Celera817,358,469 - 17,358,535RGD
Cytogenetic Map8p21.3UniSTS
HuRef816,936,642 - 16,936,708UniSTS
SHGC-111637  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37818,463,838 - 18,464,116UniSTSGRCh37
Build 36818,508,118 - 18,508,396RGDNCBI36
Celera817,428,411 - 17,428,689RGD
Cytogenetic Map8p21.3UniSTS
HuRef817,006,538 - 17,006,816UniSTS
SHGC-112344  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37818,464,285 - 18,464,590UniSTSGRCh37
Build 36818,508,565 - 18,508,870RGDNCBI36
Celera817,428,858 - 17,429,163RGD
Cytogenetic Map8p21.3UniSTS
HuRef817,006,985 - 17,007,290UniSTS
RH47419  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37818,388,236 - 18,388,318UniSTSGRCh37
Build 36818,432,516 - 18,432,598RGDNCBI36
Celera817,354,570 - 17,354,652RGD
Cytogenetic Map8p21.3UniSTS
HuRef816,932,740 - 16,932,822UniSTS
GeneMap99-GB4 RH Map865.26UniSTS
CHLC.GGAT12E04  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37818,812,003 - 18,812,161UniSTSGRCh37
Build 36818,856,283 - 18,856,441RGDNCBI36
Celera817,776,546 - 17,776,704RGD
Cytogenetic Map8p21.3UniSTS
HuRef817,353,493 - 17,353,651UniSTS
Whitehead-YAC Contig Map8 UniSTS
ECD19618  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh372233,290,874 - 33,291,189UniSTSGRCh37
Build 362231,620,874 - 31,621,189RGDNCBI36
Celera2217,093,154 - 17,093,469RGD
Cytogenetic Map8p21.3UniSTS
Cytogenetic Map22q12.3UniSTS
HuRef2216,248,783 - 16,249,098UniSTS
HuRef817,248,307 - 17,248,622UniSTS
D8S1591  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37818,656,664 - 18,656,872UniSTSGRCh37
Build 36818,700,944 - 18,701,152RGDNCBI36
Celera817,621,218 - 17,621,426RGD
Cytogenetic Map8p21.3UniSTS
HuRef817,198,191 - 17,198,399UniSTS
Whitehead-YAC Contig Map8 UniSTS
AB056822  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37818,391,853 - 18,391,956UniSTSGRCh37
Build 36818,436,133 - 18,436,236RGDNCBI36
Celera817,358,188 - 17,358,291RGD
HuRef816,936,361 - 16,936,464UniSTS
D8S1900  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37818,393,291 - 18,393,471UniSTSGRCh37
Build 36818,437,571 - 18,437,751RGDNCBI36
Celera817,359,627 - 17,359,807RGD
Cytogenetic Map8p21.3UniSTS
HuRef816,937,800 - 16,937,980UniSTS
Whitehead-YAC Contig Map8 UniSTS
SHGC-56755  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37818,736,329 - 18,736,499UniSTSGRCh37
Build 36818,780,609 - 18,780,779RGDNCBI36
Celera817,700,880 - 17,701,050RGD
Cytogenetic Map8p21.3UniSTS
HuRef817,277,814 - 17,277,984UniSTS
A009G21  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37818,658,699 - 18,659,236UniSTSGRCh37
GRCh378109,468,344 - 109,468,458UniSTSGRCh37
Build 368109,537,520 - 109,537,634RGDNCBI36
Celera8105,655,488 - 105,655,602RGD
Celera817,623,252 - 17,623,789UniSTS
HuRef817,200,225 - 17,200,762UniSTS
HuRef8104,789,769 - 104,789,883UniSTS
HuRef2221,375,257 - 21,375,781UniSTS
GeneMap99-GB4 RH Map8445.61UniSTS
G19219  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37818,740,156 - 18,740,505UniSTSGRCh37
Build 36818,784,436 - 18,784,785RGDNCBI36
Celera817,704,704 - 17,705,053RGD
Cytogenetic Map8p21.3UniSTS
HuRef817,281,646 - 17,281,995UniSTS
STS-N25188  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37818,391,508 - 18,391,672UniSTSGRCh37
Build 36818,435,788 - 18,435,952RGDNCBI36
Celera817,357,843 - 17,358,007RGD
Cytogenetic Map8p21.3UniSTS
HuRef816,936,016 - 16,936,180UniSTS
GeneMap99-GB4 RH Map879.27UniSTS
NCBI RH Map8207.4UniSTS
RH35906  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37818,563,319 - 18,563,467UniSTSGRCh37
Build 36818,607,599 - 18,607,747RGDNCBI36
Celera817,527,873 - 17,528,021RGD
Cytogenetic Map8p21.3UniSTS
HuRef817,105,841 - 17,105,989UniSTS
GeneMap99-GB4 RH Map878.96UniSTS


Expression

RNA-SEQ Expression

adipose tissue
alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
entire extraembryonic component
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
renal system
reproductive system
respiratory system
sensory system
visual system
1204 2432 2788 2243 4967 1724 2343 4 621 1834 463 2267 7182 6356 50 3731 850 1738 1609 173 1

Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001362819 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001412865 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001412866 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001412867 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001412868 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001412869 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001412870 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001412871 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001412872 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001412873 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001412874 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001412875 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001412876 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001412877 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001412879 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001412880 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001412881 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001412882 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001412883 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001412884 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001412885 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001412886 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001412887 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001412888 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001412889 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001412890 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001412891 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001412892 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001412893 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001412894 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001412895 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001412896 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_015310 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_206909 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NR_182062 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_024447113 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AB023159 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC009884 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC087821 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC090420 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC100800 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC100849 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC120051 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF243495 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF519767 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK091317 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK296546 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK313826 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK315099 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL353936 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL599849 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL832778 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC011238 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC045112 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC075044 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC075045 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BX647320 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BX647406 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH471080 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CP068270 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CS185565 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DB055312 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GU727648 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENST00000286485   ⟹   ENSP00000286485
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl818,530,710 - 18,808,876 (-)Ensembl
Ensembl Acc Id: ENST00000327040   ⟹   ENSP00000324127
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl818,527,303 - 19,013,703 (-)Ensembl
Ensembl Acc Id: ENST00000428502   ⟹   ENSP00000393228
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl818,530,711 - 18,684,099 (-)Ensembl
Ensembl Acc Id: ENST00000440756   ⟹   ENSP00000401704
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl818,527,303 - 19,013,686 (-)Ensembl
Ensembl Acc Id: ENST00000517971   ⟹   ENSP00000430043
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl818,799,298 - 18,808,867 (-)Ensembl
Ensembl Acc Id: ENST00000518303
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl818,800,997 - 18,854,336 (-)Ensembl
Ensembl Acc Id: ENST00000518315   ⟹   ENSP00000428889
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl818,535,637 - 18,808,832 (-)Ensembl
Ensembl Acc Id: ENST00000518963
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl818,799,148 - 18,804,867 (-)Ensembl
Ensembl Acc Id: ENST00000519633
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl818,804,360 - 18,808,895 (-)Ensembl
Ensembl Acc Id: ENST00000519653
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl818,786,776 - 18,808,863 (-)Ensembl
Ensembl Acc Id: ENST00000519851   ⟹   ENSP00000429069
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl818,765,449 - 18,854,374 (-)Ensembl
Ensembl Acc Id: ENST00000520789
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl818,924,533 - 18,940,452 (-)Ensembl
Ensembl Acc Id: ENST00000520858   ⟹   ENSP00000430744
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl818,762,885 - 18,804,829 (-)Ensembl
Ensembl Acc Id: ENST00000521027   ⟹   ENSP00000427897
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl818,802,276 - 18,804,874 (-)Ensembl
Ensembl Acc Id: ENST00000521475   ⟹   ENSP00000428405
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl818,936,041 - 19,084,730 (-)Ensembl
Ensembl Acc Id: ENST00000521841
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl818,936,053 - 19,014,460 (-)Ensembl
Ensembl Acc Id: ENST00000521878
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl818,535,720 - 18,684,121 (-)Ensembl
Ensembl Acc Id: ENST00000523619   ⟹   ENSP00000430640
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl818,530,711 - 18,887,034 (-)Ensembl
Ensembl Acc Id: ENST00000614430   ⟹   ENSP00000480930
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl818,530,561 - 18,684,076 (-)Ensembl
Ensembl Acc Id: ENST00000615573   ⟹   ENSP00000484565
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl818,530,710 - 18,683,932 (-)Ensembl
RefSeq Acc Id: NM_001362819   ⟹   NP_001349748
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38818,527,303 - 18,887,057 (-)NCBI
T2T-CHM13v2.0818,794,850 - 19,151,807 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001412865   ⟹   NP_001399794
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38818,527,303 - 19,084,805 (-)NCBI
T2T-CHM13v2.0818,794,850 - 19,349,609 (-)NCBI
RefSeq Acc Id: NM_001412866   ⟹   NP_001399795
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38818,527,303 - 19,084,805 (-)NCBI
T2T-CHM13v2.0818,794,850 - 19,349,609 (-)NCBI
RefSeq Acc Id: NM_001412867   ⟹   NP_001399796
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38818,774,164 - 19,084,805 (-)NCBI
T2T-CHM13v2.0819,039,921 - 19,349,609 (-)NCBI
RefSeq Acc Id: NM_001412868   ⟹   NP_001399797
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38818,760,122 - 19,084,805 (-)NCBI
T2T-CHM13v2.0819,025,875 - 19,349,609 (-)NCBI
RefSeq Acc Id: NM_001412869   ⟹   NP_001399798
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38818,762,888 - 19,084,805 (-)NCBI
T2T-CHM13v2.0819,028,641 - 19,349,609 (-)NCBI
RefSeq Acc Id: NM_001412870   ⟹   NP_001399799
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38818,527,303 - 19,013,703 (-)NCBI
T2T-CHM13v2.0818,794,850 - 19,278,517 (-)NCBI
RefSeq Acc Id: NM_001412871   ⟹   NP_001399800
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38818,527,303 - 19,013,703 (-)NCBI
T2T-CHM13v2.0818,794,850 - 19,278,517 (-)NCBI
RefSeq Acc Id: NM_001412872   ⟹   NP_001399801
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38818,527,303 - 19,013,703 (-)NCBI
T2T-CHM13v2.0818,794,850 - 19,278,517 (-)NCBI
RefSeq Acc Id: NM_001412873   ⟹   NP_001399802
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38818,527,303 - 19,013,703 (-)NCBI
T2T-CHM13v2.0818,794,850 - 19,278,517 (-)NCBI
RefSeq Acc Id: NM_001412874   ⟹   NP_001399803
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38818,527,303 - 19,013,703 (-)NCBI
T2T-CHM13v2.0818,794,850 - 19,278,517 (-)NCBI
RefSeq Acc Id: NM_001412875   ⟹   NP_001399804
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38818,527,303 - 19,013,703 (-)NCBI
T2T-CHM13v2.0818,794,850 - 19,278,517 (-)NCBI
RefSeq Acc Id: NM_001412876   ⟹   NP_001399805
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38818,527,303 - 19,013,703 (-)NCBI
T2T-CHM13v2.0818,794,850 - 19,278,517 (-)NCBI
RefSeq Acc Id: NM_001412877   ⟹   NP_001399806
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38818,760,122 - 19,013,703 (-)NCBI
T2T-CHM13v2.0819,025,875 - 19,278,517 (-)NCBI
RefSeq Acc Id: NM_001412879   ⟹   NP_001399808
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38818,774,164 - 19,013,703 (-)NCBI
T2T-CHM13v2.0819,039,921 - 19,278,517 (-)NCBI
RefSeq Acc Id: NM_001412880   ⟹   NP_001399809
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38818,555,458 - 19,013,703 (-)NCBI
T2T-CHM13v2.0818,823,011 - 19,278,517 (-)NCBI
RefSeq Acc Id: NM_001412881   ⟹   NP_001399810
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38818,762,888 - 19,013,703 (-)NCBI
T2T-CHM13v2.0819,028,641 - 19,278,517 (-)NCBI
RefSeq Acc Id: NM_001412882   ⟹   NP_001399811
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38818,527,303 - 19,013,703 (-)NCBI
T2T-CHM13v2.0818,794,850 - 19,278,517 (-)NCBI
RefSeq Acc Id: NM_001412883   ⟹   NP_001399812
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38818,527,303 - 18,887,057 (-)NCBI
T2T-CHM13v2.0818,794,850 - 19,151,807 (-)NCBI
RefSeq Acc Id: NM_001412884   ⟹   NP_001399813
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38818,762,888 - 18,854,363 (-)NCBI
T2T-CHM13v2.0819,028,641 - 19,119,128 (-)NCBI
RefSeq Acc Id: NM_001412885   ⟹   NP_001399814
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38818,527,303 - 18,854,363 (-)NCBI
T2T-CHM13v2.0818,794,850 - 19,119,128 (-)NCBI
RefSeq Acc Id: NM_001412886   ⟹   NP_001399815
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38818,527,303 - 18,854,363 (-)NCBI
T2T-CHM13v2.0818,794,850 - 19,119,128 (-)NCBI
RefSeq Acc Id: NM_001412887   ⟹   NP_001399816
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38818,760,122 - 18,854,363 (-)NCBI
T2T-CHM13v2.0819,025,875 - 19,119,128 (-)NCBI
RefSeq Acc Id: NM_001412888   ⟹   NP_001399817
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38818,527,303 - 18,848,449 (-)NCBI
T2T-CHM13v2.0818,794,850 - 19,113,220 (-)NCBI
RefSeq Acc Id: NM_001412889   ⟹   NP_001399818
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38818,527,303 - 18,839,733 (-)NCBI
T2T-CHM13v2.0818,794,850 - 19,104,500 (-)NCBI
RefSeq Acc Id: NM_001412890   ⟹   NP_001399819
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38818,527,303 - 18,823,438 (-)NCBI
T2T-CHM13v2.0818,794,850 - 19,088,205 (-)NCBI
RefSeq Acc Id: NM_001412891   ⟹   NP_001399820
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38818,527,303 - 18,822,567 (-)NCBI
T2T-CHM13v2.0818,794,850 - 19,087,335 (-)NCBI
RefSeq Acc Id: NM_001412892   ⟹   NP_001399821
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38818,799,148 - 18,822,567 (-)NCBI
T2T-CHM13v2.0819,063,914 - 19,087,335 (-)NCBI
RefSeq Acc Id: NM_001412893   ⟹   NP_001399822
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38818,760,122 - 18,808,867 (-)NCBI
T2T-CHM13v2.0819,025,875 - 19,073,638 (-)NCBI
RefSeq Acc Id: NM_001412894   ⟹   NP_001399823
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38818,762,888 - 18,808,867 (-)NCBI
T2T-CHM13v2.0819,028,641 - 19,073,638 (-)NCBI
RefSeq Acc Id: NM_001412895   ⟹   NP_001399824
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38818,527,303 - 18,684,066 (-)NCBI
T2T-CHM13v2.0818,794,850 - 18,949,809 (-)NCBI
RefSeq Acc Id: NM_001412896   ⟹   NP_001399825
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38818,527,303 - 18,684,066 (-)NCBI
T2T-CHM13v2.0818,794,850 - 18,949,809 (-)NCBI
RefSeq Acc Id: NM_015310   ⟹   NP_056125
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38818,527,303 - 19,013,703 (-)NCBI
GRCh37818,384,813 - 18,871,196 (-)NCBI
Build 36818,429,093 - 18,915,476 (-)NCBI Archive
Celera817,351,147 - 17,835,744 (-)RGD
HuRef816,929,317 - 17,412,683 (-)ENTREZGENE
CHM1_1818,586,292 - 19,072,714 (-)NCBI
T2T-CHM13v2.0818,794,850 - 19,278,517 (-)NCBI
Sequence:
RefSeq Acc Id: NM_206909   ⟹   NP_996792
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38818,527,303 - 18,808,867 (-)NCBI
GRCh37818,384,813 - 18,871,196 (-)NCBI
Build 36818,429,093 - 18,710,685 (-)NCBI Archive
Celera817,351,147 - 17,835,744 (-)RGD
HuRef816,929,317 - 17,412,683 (-)ENTREZGENE
CHM1_1818,586,292 - 18,867,854 (-)NCBI
T2T-CHM13v2.0818,794,850 - 19,073,638 (-)NCBI
Sequence:
RefSeq Acc Id: NR_182062
RefSeq Status: VALIDATED
Type: NON-CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38818,981,766 - 19,013,703 (-)NCBI
T2T-CHM13v2.0819,246,589 - 19,278,517 (-)NCBI
Protein Sequences
Protein RefSeqs NP_001349748 (Get FASTA)   NCBI Sequence Viewer  
  NP_001399794 (Get FASTA)   NCBI Sequence Viewer  
  NP_001399795 (Get FASTA)   NCBI Sequence Viewer  
  NP_001399796 (Get FASTA)   NCBI Sequence Viewer  
  NP_001399797 (Get FASTA)   NCBI Sequence Viewer  
  NP_001399798 (Get FASTA)   NCBI Sequence Viewer  
  NP_001399799 (Get FASTA)   NCBI Sequence Viewer  
  NP_001399800 (Get FASTA)   NCBI Sequence Viewer  
  NP_001399801 (Get FASTA)   NCBI Sequence Viewer  
  NP_001399802 (Get FASTA)   NCBI Sequence Viewer  
  NP_001399803 (Get FASTA)   NCBI Sequence Viewer  
  NP_001399804 (Get FASTA)   NCBI Sequence Viewer  
  NP_001399805 (Get FASTA)   NCBI Sequence Viewer  
  NP_001399806 (Get FASTA)   NCBI Sequence Viewer  
  NP_001399808 (Get FASTA)   NCBI Sequence Viewer  
  NP_001399809 (Get FASTA)   NCBI Sequence Viewer  
  NP_001399810 (Get FASTA)   NCBI Sequence Viewer  
  NP_001399811 (Get FASTA)   NCBI Sequence Viewer  
  NP_001399812 (Get FASTA)   NCBI Sequence Viewer  
  NP_001399813 (Get FASTA)   NCBI Sequence Viewer  
  NP_001399814 (Get FASTA)   NCBI Sequence Viewer  
  NP_001399815 (Get FASTA)   NCBI Sequence Viewer  
  NP_001399816 (Get FASTA)   NCBI Sequence Viewer  
  NP_001399817 (Get FASTA)   NCBI Sequence Viewer  
  NP_001399818 (Get FASTA)   NCBI Sequence Viewer  
  NP_001399819 (Get FASTA)   NCBI Sequence Viewer  
  NP_001399820 (Get FASTA)   NCBI Sequence Viewer  
  NP_001399821 (Get FASTA)   NCBI Sequence Viewer  
  NP_001399822 (Get FASTA)   NCBI Sequence Viewer  
  NP_001399823 (Get FASTA)   NCBI Sequence Viewer  
  NP_001399824 (Get FASTA)   NCBI Sequence Viewer  
  NP_001399825 (Get FASTA)   NCBI Sequence Viewer  
  NP_056125 (Get FASTA)   NCBI Sequence Viewer  
  NP_996792 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAF61269 (Get FASTA)   NCBI Sequence Viewer  
  AAH11238 (Get FASTA)   NCBI Sequence Viewer  
  AAH75044 (Get FASTA)   NCBI Sequence Viewer  
  AAH75045 (Get FASTA)   NCBI Sequence Viewer  
  AAM74203 (Get FASTA)   NCBI Sequence Viewer  
  ADU87649 (Get FASTA)   NCBI Sequence Viewer  
  BAA76786 (Get FASTA)   NCBI Sequence Viewer  
  BAG36561 (Get FASTA)   NCBI Sequence Viewer  
  BAG52336 (Get FASTA)   NCBI Sequence Viewer  
  BAG59170 (Get FASTA)   NCBI Sequence Viewer  
  CAI46004 (Get FASTA)   NCBI Sequence Viewer  
  CAJ42746 (Get FASTA)   NCBI Sequence Viewer  
  EAW63779 (Get FASTA)   NCBI Sequence Viewer  
  EAW63780 (Get FASTA)   NCBI Sequence Viewer  
  EAW63781 (Get FASTA)   NCBI Sequence Viewer  
  EAW63782 (Get FASTA)   NCBI Sequence Viewer  
  EAW63783 (Get FASTA)   NCBI Sequence Viewer  
  EAW63784 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSP00000286485
  ENSP00000286485.8
  ENSP00000324127
  ENSP00000324127.8
  ENSP00000393228
  ENSP00000393228.2
  ENSP00000427897.1
  ENSP00000428405.1
  ENSP00000428889.1
  ENSP00000429069.1
  ENSP00000430043.1
  ENSP00000430640
  ENSP00000430640.1
  ENSP00000430744
  ENSP00000430744.1
GenBank Protein Q9NYI0 (Get FASTA)   NCBI Sequence Viewer  
RefSeq Acc Id: NP_056125   ⟸   NM_015310
- Peptide Label: isoform 1
- UniProtKB: Q9Y2F1 (UniProtKB/Swiss-Prot),   Q6B003 (UniProtKB/Swiss-Prot),   E9KL50 (UniProtKB/Swiss-Prot),   A6NFQ4 (UniProtKB/Swiss-Prot),   Q9NYI0 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_996792   ⟸   NM_206909
- Peptide Label: isoform 2
- UniProtKB: Q9NYI0 (UniProtKB/Swiss-Prot),   B3KRC4 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001349748   ⟸   NM_001362819
- Peptide Label: isoform 3
- UniProtKB: Q9Y2F1 (UniProtKB/Swiss-Prot),   Q9NYI0 (UniProtKB/Swiss-Prot),   Q6B003 (UniProtKB/Swiss-Prot),   E9KL50 (UniProtKB/Swiss-Prot),   A6NFQ4 (UniProtKB/Swiss-Prot)
Ensembl Acc Id: ENSP00000430043   ⟸   ENST00000517971
Ensembl Acc Id: ENSP00000428889   ⟸   ENST00000518315
Ensembl Acc Id: ENSP00000429069   ⟸   ENST00000519851
Ensembl Acc Id: ENSP00000393228   ⟸   ENST00000428502
Ensembl Acc Id: ENSP00000401704   ⟸   ENST00000440756
Ensembl Acc Id: ENSP00000430744   ⟸   ENST00000520858
Ensembl Acc Id: ENSP00000427897   ⟸   ENST00000521027
Ensembl Acc Id: ENSP00000428405   ⟸   ENST00000521475
Ensembl Acc Id: ENSP00000480930   ⟸   ENST00000614430
Ensembl Acc Id: ENSP00000286485   ⟸   ENST00000286485
Ensembl Acc Id: ENSP00000484565   ⟸   ENST00000615573
Ensembl Acc Id: ENSP00000324127   ⟸   ENST00000327040
Ensembl Acc Id: ENSP00000430640   ⟸   ENST00000523619
RefSeq Acc Id: NP_001399794   ⟸   NM_001412865
- Peptide Label: isoform 4
- UniProtKB: Q9Y2F1 (UniProtKB/Swiss-Prot),   Q9NYI0 (UniProtKB/Swiss-Prot),   Q6B003 (UniProtKB/Swiss-Prot),   E9KL50 (UniProtKB/Swiss-Prot),   A6NFQ4 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: NP_001399795   ⟸   NM_001412866
- Peptide Label: isoform 5
- UniProtKB: Q9Y2F1 (UniProtKB/Swiss-Prot),   Q9NYI0 (UniProtKB/Swiss-Prot),   Q6B003 (UniProtKB/Swiss-Prot),   E9KL50 (UniProtKB/Swiss-Prot),   A6NFQ4 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: NP_001399801   ⟸   NM_001412872
- Peptide Label: isoform 11
- UniProtKB: Q9Y2F1 (UniProtKB/Swiss-Prot),   Q9NYI0 (UniProtKB/Swiss-Prot),   Q6B003 (UniProtKB/Swiss-Prot),   E9KL50 (UniProtKB/Swiss-Prot),   A6NFQ4 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: NP_001399800   ⟸   NM_001412871
- Peptide Label: isoform 10
- UniProtKB: Q9Y2F1 (UniProtKB/Swiss-Prot),   Q9NYI0 (UniProtKB/Swiss-Prot),   Q6B003 (UniProtKB/Swiss-Prot),   E9KL50 (UniProtKB/Swiss-Prot),   A6NFQ4 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: NP_001399802   ⟸   NM_001412873
- Peptide Label: isoform 12
- UniProtKB: Q9Y2F1 (UniProtKB/Swiss-Prot),   Q9NYI0 (UniProtKB/Swiss-Prot),   Q6B003 (UniProtKB/Swiss-Prot),   E9KL50 (UniProtKB/Swiss-Prot),   A6NFQ4 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: NP_001399799   ⟸   NM_001412870
- Peptide Label: isoform 9
- UniProtKB: Q9Y2F1 (UniProtKB/Swiss-Prot),   Q9NYI0 (UniProtKB/Swiss-Prot),   Q6B003 (UniProtKB/Swiss-Prot),   E9KL50 (UniProtKB/Swiss-Prot),   A6NFQ4 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: NP_001399803   ⟸   NM_001412874
- Peptide Label: isoform 13
- UniProtKB: Q9Y2F1 (UniProtKB/Swiss-Prot),   Q9NYI0 (UniProtKB/Swiss-Prot),   Q6B003 (UniProtKB/Swiss-Prot),   E9KL50 (UniProtKB/Swiss-Prot),   A6NFQ4 (UniProtKB/Swiss-Prot),   E5RJ29 (UniProtKB/TrEMBL)
RefSeq Acc Id: NP_001399804   ⟸   NM_001412875
- Peptide Label: isoform 14
- UniProtKB: Q9Y2F1 (UniProtKB/Swiss-Prot),   Q9NYI0 (UniProtKB/Swiss-Prot),   Q6B003 (UniProtKB/Swiss-Prot),   E9KL50 (UniProtKB/Swiss-Prot),   A6NFQ4 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: NP_001399811   ⟸   NM_001412882
- Peptide Label: isoform 13
- UniProtKB: Q9Y2F1 (UniProtKB/Swiss-Prot),   Q9NYI0 (UniProtKB/Swiss-Prot),   Q6B003 (UniProtKB/Swiss-Prot),   E9KL50 (UniProtKB/Swiss-Prot),   A6NFQ4 (UniProtKB/Swiss-Prot),   E5RJ29 (UniProtKB/TrEMBL)
RefSeq Acc Id: NP_001399805   ⟸   NM_001412876
- Peptide Label: isoform 15
- UniProtKB: Q9Y2F1 (UniProtKB/Swiss-Prot),   Q9NYI0 (UniProtKB/Swiss-Prot),   Q6B003 (UniProtKB/Swiss-Prot),   E9KL50 (UniProtKB/Swiss-Prot),   A6NFQ4 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: NP_001399812   ⟸   NM_001412883
- Peptide Label: isoform 13
- UniProtKB: Q9Y2F1 (UniProtKB/Swiss-Prot),   Q9NYI0 (UniProtKB/Swiss-Prot),   Q6B003 (UniProtKB/Swiss-Prot),   E9KL50 (UniProtKB/Swiss-Prot),   A6NFQ4 (UniProtKB/Swiss-Prot),   E5RJ29 (UniProtKB/TrEMBL)
RefSeq Acc Id: NP_001399814   ⟸   NM_001412885
- Peptide Label: isoform 21
RefSeq Acc Id: NP_001399815   ⟸   NM_001412886
- Peptide Label: isoform 21
RefSeq Acc Id: NP_001399817   ⟸   NM_001412888
- Peptide Label: isoform 21
RefSeq Acc Id: NP_001399818   ⟸   NM_001412889
- Peptide Label: isoform 21
RefSeq Acc Id: NP_001399819   ⟸   NM_001412890
- Peptide Label: isoform 23
RefSeq Acc Id: NP_001399820   ⟸   NM_001412891
- Peptide Label: isoform 30
RefSeq Acc Id: NP_001399825   ⟸   NM_001412896
- Peptide Label: isoform 29
RefSeq Acc Id: NP_001399824   ⟸   NM_001412895
- Peptide Label: isoform 28
- UniProtKB: B4DKF8 (UniProtKB/TrEMBL)
RefSeq Acc Id: NP_001399809   ⟸   NM_001412880
- Peptide Label: isoform 18
- UniProtKB: Q9Y2F1 (UniProtKB/Swiss-Prot),   Q9NYI0 (UniProtKB/Swiss-Prot),   Q6B003 (UniProtKB/Swiss-Prot),   E9KL50 (UniProtKB/Swiss-Prot),   A6NFQ4 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: NP_001399797   ⟸   NM_001412868
- Peptide Label: isoform 7
RefSeq Acc Id: NP_001399806   ⟸   NM_001412877
- Peptide Label: isoform 16
RefSeq Acc Id: NP_001399816   ⟸   NM_001412887
- Peptide Label: isoform 22
- UniProtKB: E5RJE4 (UniProtKB/TrEMBL)
RefSeq Acc Id: NP_001399822   ⟸   NM_001412893
- Peptide Label: isoform 26
RefSeq Acc Id: NP_001399798   ⟸   NM_001412869
- Peptide Label: isoform 8
RefSeq Acc Id: NP_001399810   ⟸   NM_001412881
- Peptide Label: isoform 19
RefSeq Acc Id: NP_001399813   ⟸   NM_001412884
- Peptide Label: isoform 20
- UniProtKB: E5RJE4 (UniProtKB/TrEMBL)
RefSeq Acc Id: NP_001399823   ⟸   NM_001412894
- Peptide Label: isoform 27
- UniProtKB: E5RJE4 (UniProtKB/TrEMBL)
RefSeq Acc Id: NP_001399796   ⟸   NM_001412867
- Peptide Label: isoform 6
RefSeq Acc Id: NP_001399808   ⟸   NM_001412879
- Peptide Label: isoform 17
RefSeq Acc Id: NP_001399821   ⟸   NM_001412892
- Peptide Label: isoform 25
- UniProtKB: E5RFG7 (UniProtKB/TrEMBL)
Protein Domains
PH   SEC7

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q9NYI0-F1-model_v2 AlphaFold Q9NYI0 1-1048 view protein structure

Promoters
RGD ID:7212727
Promoter ID:EPDNEW_H12109
Type:initiation region
Name:PSD3_2
Description:pleckstrin and Sec7 domain containing 3
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_H12110  EPDNEW_H12112  EPDNEW_H12113  EPDNEW_H12111  
Experiment Methods:Single-end sequencing.
Position:
Human AssemblyChrPosition (strand)Source
GRCh38818,684,066 - 18,684,126EPDNEW
RGD ID:7212729
Promoter ID:EPDNEW_H12110
Type:initiation region
Name:PSD3_4
Description:pleckstrin and Sec7 domain containing 3
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_H12109  EPDNEW_H12112  EPDNEW_H12113  EPDNEW_H12111  
Experiment Methods:Single-end sequencing.
Position:
Human AssemblyChrPosition (strand)Source
GRCh38818,808,863 - 18,808,923EPDNEW
RGD ID:7212735
Promoter ID:EPDNEW_H12111
Type:initiation region
Name:PSD3_5
Description:pleckstrin and Sec7 domain containing 3
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_H12109  EPDNEW_H12110  EPDNEW_H12112  EPDNEW_H12113  
Experiment Methods:Single-end sequencing.
Position:
Human AssemblyChrPosition (strand)Source
GRCh38818,887,034 - 18,887,094EPDNEW
RGD ID:6806962
Promoter ID:HG_KWN:60833
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:CD4+TCell,   HeLa_S3,   NB4
Transcripts:NM_015310
Position:
Human AssemblyChrPosition (strand)Source
Build 36818,915,159 - 18,915,659 (-)MPROMDB
RGD ID:7212731
Promoter ID:EPDNEW_H12112
Type:initiation region
Name:PSD3_1
Description:pleckstrin and Sec7 domain containing 3
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_H12109  EPDNEW_H12110  EPDNEW_H12113  EPDNEW_H12111  
Experiment Methods:Single-end sequencing.
Position:
Human AssemblyChrPosition (strand)Source
GRCh38819,013,700 - 19,013,760EPDNEW
RGD ID:7212733
Promoter ID:EPDNEW_H12113
Type:initiation region
Name:PSD3_3
Description:pleckstrin and Sec7 domain containing 3
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_H12109  EPDNEW_H12110  EPDNEW_H12112  EPDNEW_H12111  
Experiment Methods:Single-end sequencing.; Paired-end sequencing.
Position:
Human AssemblyChrPosition (strand)Source
GRCh38819,084,741 - 19,084,801EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene HGNC:19093 AgrOrtholog
COSMIC PSD3 COSMIC
Ensembl Genes ENSG00000156011 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENST00000286485 ENTREZGENE
  ENST00000286485.12 UniProtKB/Swiss-Prot
  ENST00000327040 ENTREZGENE
  ENST00000327040.13 UniProtKB/Swiss-Prot
  ENST00000428502 ENTREZGENE
  ENST00000428502.6 UniProtKB/TrEMBL
  ENST00000517971.5 UniProtKB/TrEMBL
  ENST00000518315.5 UniProtKB/TrEMBL
  ENST00000518963 ENTREZGENE
  ENST00000519851.5 UniProtKB/TrEMBL
  ENST00000520858 ENTREZGENE
  ENST00000520858.5 UniProtKB/TrEMBL
  ENST00000521027.5 UniProtKB/TrEMBL
  ENST00000521475.1 UniProtKB/TrEMBL
  ENST00000523619 ENTREZGENE
  ENST00000523619.5 UniProtKB/TrEMBL
Gene3D-CATH 1.10.1000.11 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  2.30.29.30 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
GTEx ENSG00000156011 GTEx
HGNC ID HGNC:19093 ENTREZGENE
Human Proteome Map PSD3 Human Proteome Map
InterPro PH-like_dom_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PH_9 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PH_dom-spectrin-type UniProtKB/TrEMBL
  PH_domain UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Sec7_C_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Sec7_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Sec7_dom_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report hsa:23362 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
NCBI Gene 23362 ENTREZGENE
OMIM 614440 OMIM
PANTHER GUANYL-NUCLEOTIDE EXCHANGE FACTOR UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PH AND SEC7 DOMAIN-CONTAINING PROTEIN 3 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam PH_9 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Sec7 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PharmGKB PA128394629 PharmGKB
PRINTS SPECTRINPH UniProtKB/TrEMBL
PROSITE PH_DOMAIN UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SEC7 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
SMART Sec7 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SM00233 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP PH domain-like UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SSF48425 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt A6NFQ4 ENTREZGENE
  B3KRC4 ENTREZGENE, UniProtKB/TrEMBL
  B4DKF8 ENTREZGENE, UniProtKB/TrEMBL
  E5RFG7 ENTREZGENE, UniProtKB/TrEMBL
  E5RH02_HUMAN UniProtKB/TrEMBL
  E5RIH3_HUMAN UniProtKB/TrEMBL
  E5RJ29 ENTREZGENE, UniProtKB/TrEMBL
  E5RJE4 ENTREZGENE, UniProtKB/TrEMBL
  E9KL50 ENTREZGENE
  H0YAQ7_HUMAN UniProtKB/TrEMBL
  H0YC20_HUMAN UniProtKB/TrEMBL
  PSD3_HUMAN UniProtKB/Swiss-Prot
  Q6B003 ENTREZGENE
  Q7L3Y3_HUMAN UniProtKB/TrEMBL
  Q9NYI0 ENTREZGENE
  Q9Y2F1 ENTREZGENE
UniProt Secondary A6NFQ4 UniProtKB/Swiss-Prot
  E9KL50 UniProtKB/Swiss-Prot
  Q6B003 UniProtKB/Swiss-Prot
  Q9Y2F1 UniProtKB/Swiss-Prot