C17orf67 (chromosome 17 open reading frame 67)

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Gene: C17orf67 (chromosome 17 open reading frame 67) Homo sapiens

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Symbol:

C17orf67

Name:

chromosome 17 open reading frame 67

RGD ID:

1603500

HGNC Page

HGNC:27900

Description:

Predicted to be located in extracellular region.

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

hypothetical protein LOC339210; uncharacterized protein C17orf67

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Allele / Splice:

See ClinVar data

Latest Assembly:

GRCh38 - Human Genome Assembly GRCh38

Position:

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	17	56,791,913 - 56,833,920 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	17	56,791,913 - 56,838,773 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	17	54,869,274 - 54,911,281 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	17	52,224,273 - 52,248,249 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Celera	17	51,330,963 - 51,354,807 (-)	NCBI		Celera
Cytogenetic Map	17	q22	NCBI
HuRef	17	50,230,102 - 50,271,445 (-)	NCBI		HuRef
CHM1_1	17	54,934,098 - 54,976,388 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	17	57,668,072 - 57,711,152 (-)	NCBI		T2T-CHM13v2.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

Joubert syndrome 1 (IAGP)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

acrylamide (EXP)

arsane (EXP)

arsenic atom (EXP)

benzo[a]pyrene (EXP)

butanal (EXP)

methotrexate (EXP)

ozone (EXP)

paracetamol (EXP)

permethrin (EXP)

silicon dioxide (EXP)

sunitinib (EXP)

zinc atom (EXP)

zinc(0) (EXP)

Gene Ontology Annotations Click to see Annotation Detail View

Cellular Component

extracellular region (IEA)

Molecular Function

protein binding (IPI)

References

References - curated

#	Reference Title	Reference Citation
1.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

Additional References at PubMed

PMID:12477932	PMID:19266077	PMID:23354108	PMID:23361222	PMID:25416956	PMID:25429064	PMID:32814053

Genomics

Comparative Map Data

C17orf67
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	17	56,791,913 - 56,833,920 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	17	56,791,913 - 56,838,773 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	17	54,869,274 - 54,911,281 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	17	52,224,273 - 52,248,249 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Celera	17	51,330,963 - 51,354,807 (-)	NCBI		Celera
Cytogenetic Map	17	q22	NCBI
HuRef	17	50,230,102 - 50,271,445 (-)	NCBI		HuRef
CHM1_1	17	54,934,098 - 54,976,388 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	17	57,668,072 - 57,711,152 (-)	NCBI		T2T-CHM13v2.0

Gm525
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	11	88,957,346 - 88,983,890 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	11	88,964,667 - 88,983,866 (+)	Ensembl		GRCm39 Ensembl
GRCm38	11	89,073,841 - 89,093,064 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	11	89,073,841 - 89,093,040 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	11	88,935,155 - 88,954,378 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	11	88,890,014 - 88,909,130 (+)	NCBI		MGSCv36	mm8
MGSCv36	11	89,815,532 - 89,835,364 (+)	NCBI		MGSCv36	mm8
Celera	11	98,695,515 - 98,711,369 (+)	NCBI		Celera
Cytogenetic Map	11	C	NCBI
cM Map	11	54.34	NCBI

C10h17orf67
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	10	74,392,541 - 74,413,323 (+)	NCBI		GRCr8
mRatBN7.2	10	73,895,343 - 73,916,133 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	10	73,895,343 - 73,916,133 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	10	78,519,589 - 78,540,372 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	10	78,024,521 - 78,045,307 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	10	73,487,685 - 73,508,473 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	10	73,659,109 - 73,660,475 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_5.0	10	73,560,665 - 73,562,029 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
Celera	10	72,799,772 - 72,820,093 (+)	NCBI		Celera
Cytogenetic Map	10	q26	NCBI

CUNH17orf67
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955451	6,003,652 - 6,020,474 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955451	6,003,689 - 6,020,435 (+)	NCBI	ChiLan1.0	ChiLan1.0

C19H17orf67
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	19	72,964,912 - 73,008,682 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	17	77,775,842 - 77,819,608 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	17	50,869,206 - 50,912,963 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	17	55,731,510 - 55,774,063 (-)	NCBI	panpan1.1	PanPan1.1	panPan2

C9H17orf67
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	9	31,633,326 - 31,654,303 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	9	31,633,305 - 31,661,065 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	9	30,873,196 - 30,893,638 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	9	32,440,931 - 32,461,415 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	9	32,440,918 - 32,468,716 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	9	31,226,147 - 31,246,626 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	9	31,510,380 - 31,530,855 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	9	31,593,655 - 31,614,149 (-)	NCBI		UU_Cfam_GSD_1.0

CUNH17orf67
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405602	30,996,193 - 31,017,132 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936490	6,058,007 - 6,076,211 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936490	6,058,007 - 6,078,937 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

C12H17orf67
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	12	33,107,442 - 33,125,839 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	12	33,104,570 - 33,125,799 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	12	33,931,046 - 34,090,041 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

CUNH17orf67
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	16	36,575,651 - 36,622,088 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
Vero_WHO_p1.0	NW_023666077	7,397,344 - 7,441,664 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

CUNH17orf67
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624795	11,868,118 - 11,883,823 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624795	11,866,373 - 11,896,382 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in C17orf67
4 total Variants

Clinical Variants

Name	Type	Condition(s)	Position(s)	Clinical significance
GRCh38/hg38 17q23.2-25.3(chr17:36449220-83086677)x3	copy number gain	Developmental Delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000052483]\|Developmental delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000052483]\|See cases [RCV000052483]	Chr17:36449220..83086677 [GRCh38] Chr17:58617905..81044553 [GRCh37] Chr17:55972687..78637842 [NCBI36] Chr17:17q23.2-25.3	pathogenic
GRCh38/hg38 17q21.33-24.2(chr17:36449220-68170214)x3	copy number gain	See cases [RCV000050957]	Chr17:36449220..68170214 [GRCh38] Chr17:48563237..65936105 [GRCh37] Chr17:45918236..63677950 [NCBI36] Chr17:17q21.33-24.2	pathogenic
GRCh38/hg38 17q21.33-22(chr17:49974533-56807609)x1	copy number loss	See cases [RCV000053433]	Chr17:49974533..56807609 [GRCh38] Chr17:48051897..54884970 [GRCh37] Chr17:45406896..52239969 [NCBI36] Chr17:17q21.33-22	pathogenic
GRCh38/hg38 17q23.1-25.1(chr17:36449220-75053130)x3	copy number gain	See cases [RCV000137437]	Chr17:36449220..75053130 [GRCh38] Chr17:57595736..73049225 [GRCh37] Chr17:54950518..70560820 [NCBI36] Chr17:17q23.1-25.1	pathogenic
GRCh38/hg38 17q22(chr17:56683505-58084939)x1	copy number loss	See cases [RCV000135409]	Chr17:56683505..58084939 [GRCh38] Chr17:54760866..56162300 [GRCh37] Chr17:52115865..53517299 [NCBI36] Chr17:17q22	pathogenic
NM_001085430.4(C17orf67):c.109C>T (p.Arg37Ter)	single nucleotide variant	not specified [RCV000239313]	Chr17:56814916 [GRCh38] Chr17:54892277 [GRCh37] Chr17:17q22	pathogenic\|uncertain significance
GRCh37/hg19 17q22(chr17:52189051-57477162)x3	copy number gain	See cases [RCV000448801]	Chr17:52189051..57477162 [GRCh37] Chr17:17q22	pathogenic
GRCh37/hg19 17q21.33-23.2(chr17:49076980-58740945)x3	copy number gain	See cases [RCV000448805]	Chr17:49076980..58740945 [GRCh37] Chr17:17q21.33-23.2	pathogenic
GRCh37/hg19 17q21.31-25.3(chr17:42580684-81085615)x3	copy number gain	See cases [RCV000447823]	Chr17:42580684..81085615 [GRCh37] Chr17:17q21.31-25.3	pathogenic
GRCh37/hg19 17p13.3-q25.3(chr17:526-81041938)	copy number gain	See cases [RCV000511439]	Chr17:526..81041938 [GRCh37] Chr17:17p13.3-q25.3	pathogenic
GRCh37/hg19 17p13.3-q25.3(chr17:526-81041938)x3	copy number gain	See cases [RCV000512441]	Chr17:526..81041938 [GRCh37] Chr17:17p13.3-q25.3	pathogenic
GRCh37/hg19 17q22(chr17:54584318-55220914)x1	copy number loss	not provided [RCV000683944]	Chr17:54584318..55220914 [GRCh37] Chr17:17q22	pathogenic
GRCh37/hg19 17p13.3-q25.3(chr17:8547-81060040)x3	copy number gain	not provided [RCV000739324]	Chr17:8547..81060040 [GRCh37] Chr17:17p13.3-q25.3	pathogenic
GRCh37/hg19 17p13.3-q25.3(chr17:7214-81058310)x3	copy number gain	not provided [RCV000739320]	Chr17:7214..81058310 [GRCh37] Chr17:17p13.3-q25.3	pathogenic
GRCh37/hg19 17p13.3-q25.3(chr17:12344-81057996)x3	copy number gain	not provided [RCV000739325]	Chr17:12344..81057996 [GRCh37] Chr17:17p13.3-q25.3	pathogenic
NC_000017.10:g.(?_54671585)_(59938900_?)dup	duplication	Familial aplasia of the vermis [RCV001923071]	Chr17:54671585..59938900 [GRCh37] Chr17:17q22-23.2	uncertain significance
NC_000017.10:g.(?_54671585)_(55927371_?)del	deletion	not provided [RCV004581399]	Chr17:54671585..55927371 [GRCh37] Chr17:17q22	pathogenic

miRNA Target Status

Predicted Target Of

	Summary Value
Count of predictions:	818
Count of miRNA genes:	383
Interacting mature miRNAs:	404
Transcripts:	ENST00000397861, ENST00000397862, ENST00000487705, ENST00000570754, ENST00000575658
Prediction methods:	Microtar, Miranda, Rnahybrid
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCh38)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
406996243	GWAS645219_H	body height QTL GWAS645219 (human)		4e-08	body height (VT:0001253)	body height (CMO:0000106)	17	56828133	56828134	Human
407032329	GWAS681305_H	inflammatory bowel disease QTL GWAS681305 (human)		8e-10	inflammatory bowel disease		17	56803632	56803633	Human
406915503	GWAS564479_H	cognitive function measurement QTL GWAS564479 (human)		0.000003	cognitive function measurement		17	56802920	56802921	Human
406959599	GWAS608575_H	ankylosing spondylitis, psoriasis, ulcerative colitis, Crohn's disease, sclerosing cholangitis QTL GWAS608575 (human)		2e-08	ankylosing spondylitis, psoriasis, ulcerative colitis, Crohn's disease, sclerosing cholangitis		17	56803632	56803633	Human
406940062	GWAS589038_H	metabolite measurement QTL GWAS589038 (human)		5e-08	metabolite measurement		17	56817930	56817931	Human
407000365	GWAS649341_H	Crohn's disease QTL GWAS649341 (human)		0.000004	Crohn's disease		17	56803632	56803633	Human
407031757	GWAS680733_H	Crohn's disease QTL GWAS680733 (human)		1e-10	Crohn's disease		17	56803632	56803633	Human
407290969	GWAS939945_H	body height QTL GWAS939945 (human)		1e-300	body height (VT:0001253)	body height (CMO:0000106)	17	56810991	56810992	Human

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

adipose tissue	alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	entire extraembryonic component	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	musculoskeletal system	nervous system	pharyngeal arch	renal system	reproductive system	respiratory system	sensory system	visual system
1204	2439	2787	2251	4972	1726	2351	5	624	1946	465	2269	7295	6462	53	3733	1	852	1744	1617	175	1

Sequence

Nucleotide Sequences


RefSeq Transcripts	NG_054932	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001085430	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AC106858	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC041467	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC093905	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC093907	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BU075516	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CA308560	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH471109	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CP068261	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENST00000397861 ⟹ ENSP00000380959

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	17	56,791,913 - 56,833,920 (-)	Ensembl

Ensembl Acc Id:

ENST00000487705

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	17	56,824,747 - 56,838,773 (-)	Ensembl

Ensembl Acc Id:

ENST00000570754

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	17	56,791,913 - 56,795,292 (-)	Ensembl

RefSeq Acc Id:

NM_001085430 ⟹ NP_001078899

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38	17	56,791,913 - 56,833,920 (-)	NCBI
GRCh37	17	54,869,274 - 54,911,256 (-)	NCBI
Build 36	17	52,224,273 - 52,248,249 (-)	NCBI Archive
Celera	17	51,330,963 - 51,354,807 (-)	RGD
HuRef	17	50,230,102 - 50,271,445 (-)	NCBI
CHM1_1	17	54,934,098 - 54,976,388 (-)	NCBI
T2T-CHM13v2.0	17	57,668,072 - 57,711,152 (-)	NCBI

Sequence:

show sequence

GGAGTAACAGTGGGGCGTTTGAGAGGATGGAGGGTTGAATGCCAAAACTTCGTAATCGTAGAAA
ATTCTGGAAAGCCGCCGGCGGGGCAAGGCCACGAGGATCCTCCTCGCAGCACCGCGCCGCGCGG
GGCCCAGGGGCCGCGCTCACGCCCGCCGCTCGGCGCAGACACGAGTGCCCCCGACTTGAGCCGA
ACCTCTAGCCGATGCCGGCGCCGCCGCCGCCGGGGATGCGTAAGCCGACTGGGAAGCGAGGGGG
GGAGGCGGCCTGCGCGGCACCGCCCGACCTGGCCGCGGCGGGCTGAGCCCCAGGTTCCGGAGGA
ATGCTCGCTCCCCGCTGGAGTCCTACCAGCCCAACACGGACCTGAGCCGCGACCACGCGGGCTG
CAGCCTGCAGCACATCAGCTACCCGGAGAACGCGGACGCGGAAGCACCGCTGCTCAGCACCCCC
GAAGAAACACGGAATCCAGAGAGGCACAGGCACCGCCCCGGCGCGCACAGCTGCACTCAGCGGC
TTCCTTCCTACTACATACATACATAGGAGTGGGAGCCGAGGACCACTTGTTGCTTGCGGACTTC
CTCTAGCATAAAAGATGGAAAGAAAACACACACCGAAGCAAGGGACCAAAGGAACAGAAAAGAA
ACGCAGAGATCATAGGAAAACTGCAAAGAAATACTTGATAATATCTTCCAAACGATTAGAGAAG
ACATAACATTCATTAAGAATACACATATAGATGTATATATACGTATGAAGAAAACCTGCTTGAT
ATCACACAGTCAGGAGTCAACTGAGTTGGGGCTTTGAACTTAGGTTTATCTGATGCCAAAGTTT
GTGATGCTCTTCAACCATTTAGGGTACCGCAGAGTGTGGATTTTGAATCACCTGCATCAGCATC
ATTTTAAAATATAGATTCTGTGGTCCTGACCAGGTCTCTGAAGTCAGAATATGAAGTGGAGCTA
GGAATCTAACTTCTTAACAAGTTCCCTAGATGCCTAAGGGTATCCCTGAATGATACAGTTTTGT
TTGAAAGACTGAAAAGCCCAAAGCTGGCCCTTTTGGGAAATAGCAGTAAATCATTGATATGTGA
AGGTTCCCAGCAGGAGGATGAAAATTTACAGGAATTCGGAGGAAAATATTTCAGTGGTCATTAC
TAAAACGCTCAGAGTCAGATACATTCAGCATCATACCGTAAGTCCCGTTAGTCAAAGCATAAAC
AAGCGCAGGGCCTGGCATGGCTTCCTTCAAGTTGGCTGACTCAGTCTGGGAGGATTCACTCAGC
AAGAGGCAGAGGAACCAAGGCAGGATGAAGACATTGCCTGTGCTCGTGCTGTCTCTTACCTTAC
TGACTGTCTTCTCAGAGACCTCCCCGATTTTGACAGAGAAGCAGGCCAAACAGCTCCTAAGATC
TCGGCGACAGGATAGACCAAGCAAACCCGGATTCCCCGATGAGCCAATGCGGGAATACATGCAC
CACCTGCTCGCCCTGGAGCATCGCGCTGAGGAGCAGTTCCTGGAGCACTGGCTGAACCCTCACT
GCAAACCCCACTGTGACAGGAACAGGATTCATCCTGTGTAAGGGGATCAGGACCAGCCTCGCAA
GCATTTTAATAGACAACAAGCTGGATAATGTCGAAGCAAGACAAGGCTGCTTCTTTCACTTGTT
TTTAAATTGCAGAAATGGATGTCTTCAGACCTCGTGAACTGTGGGCATATCAAAGATTGCCTTG
GAAATGGCAAATATATATACTGCTTCATTTTACTAACCTGCATAGATCACTAAAACCAATAGCT
TAAAGCATAGACACCTCCCAAAGGTCTTCCCATCAGTTTGCAAGAGTGGGAACAACCAGAATCT
TACCTGGGGTTGATGGAGCTGGAACTCCCAGACCAGGAGTTGGGGCAGGCTGCCTGCCCTAAGG
AATTTGGGGAATCCTTGTTCAGAGTAGTGAAGCATACCACTTGGGGTTGCTGAGTTGTTTTGTC
CTCTATTTTTTTCCTCTTCTTTTCTGCCCTAATAAACATTGGTATTAAATTTA

hide sequence

Protein Sequences


Protein RefSeqs	NP_001078899	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAH93905	(Get FASTA)	NCBI Sequence Viewer
	AAH93907	(Get FASTA)	NCBI Sequence Viewer
	EAW94527	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSP00000380959
	ENSP00000380959.2
GenBank Protein	Q0P5P2	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:	NP_001078899 ⟸ NM_001085430
- Peptide Label:	precursor
- UniProtKB:	Q0P5P2 (UniProtKB/Swiss-Prot)
- Sequence:	show sequence MKTLPVLVLSLTLLTVFSETSPILTEKQAKQLLRSRRQDRPSKPGFPDEPMREYMHHLLALEHR AEEQFLEHWLNPHCKPHCDRNRIHPV hide sequence

Ensembl Acc Id:

ENSP00000380959 ⟸ ENST00000397861

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-Q0P5P2-F1-model_v2	AlphaFold	Q0P5P2	1-90	view protein structure

Promoters

RGD ID:

7235739

Promoter ID:

EPDNEW_H23616

Type:

single initiation site

Name:

C17orf67_2

Description:

chromosome 17 open reading frame 67

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Alternative Promoters:

null; see alsoEPDNEW_H23618

Experiment Methods:

Single-end sequencing.

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38	17	56,821,589 - 56,821,649	EPDNEW

RGD ID:

7235745

Promoter ID:

EPDNEW_H23618

Type:

initiation region

Name:

C17orf67_1

Description:

chromosome 17 open reading frame 67

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Alternative Promoters:

null; see alsoEPDNEW_H23616

Experiment Methods:

Single-end sequencing.

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38	17	56,833,915 - 56,833,975	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	HGNC:27900	AgrOrtholog
COSMIC	C17orf67	COSMIC
Ensembl Genes	ENSG00000214226	Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript	ENST00000397861	ENTREZGENE
	ENST00000397861.7	UniProtKB/Swiss-Prot
GTEx	ENSG00000214226	GTEx
HGNC ID	HGNC:27900	ENTREZGENE
Human Proteome Map	C17orf67	Human Proteome Map
InterPro	DUF4543	UniProtKB/Swiss-Prot
KEGG Report	hsa:339210	UniProtKB/Swiss-Prot
NCBI Gene	339210	ENTREZGENE
PANTHER	HYPOTHETICAL PROTEIN LOC688126	UniProtKB/Swiss-Prot
	HYPOTHETICAL PROTEIN LOC688126	UniProtKB/Swiss-Prot
Pfam	DUF4543	UniProtKB/Swiss-Prot
PharmGKB	PA142672250	PharmGKB
UniProt	CQ067_HUMAN	UniProtKB/Swiss-Prot, ENTREZGENE

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - ClinVar