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Gene: Sec31b (SEC31 homolog B, COPII coat complex component) Rattus norvegicus

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Symbol:

Sec31b

Name:

SEC31 homolog B, COPII coat complex component

RGD ID:

1598329

Description:

Predicted to enable structural molecule activity. Predicted to be involved in COPII-coated vesicle cargo loading and endoplasmic reticulum organization. Predicted to be part of COPII vesicle coat. Predicted to be active in endoplasmic reticulum exit site. Orthologous to human SEC31B (SEC31 homolog B, COPII coat complex component); PARTICIPATES IN Endoplasmic Reticulum-associated degradation pathway; INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; acetamide; acrylamide.

Type:

protein-coding

RefSeq Status:

PROVISIONAL

Previously known as:

LOC309433; protein transport protein Sec31B; SEC31 homolog B; SEC31 homolog B (S. cerevisiae); SEC31 homolog B, COPII coating complex component; similar to S. cerevisiae SEC31-like 2 isoform a

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	SEC31B (SEC31 homolog B, COPII coat complex component)	HGNC	EggNOG, Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, OrthoMCL, Panther, Treefam
Mus musculus (house mouse):	Sec31b (SEC31 homolog B, COPII coat complex component)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Sec31b (SEC31 homolog B, COPII coat complex component)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	SEC31B (SEC31 homolog B, COPII coat complex component)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	SEC31B (SEC31 homolog B, COPII coat complex component)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Sec31b (SEC31 homolog B, COPII coat complex component)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	SEC31B (SEC31 homolog B, COPII coat complex component)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	SEC31B (SEC31 homolog B, COPII coat complex component)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Alliance orthologs ³
Homo sapiens (human):	SEC31B (SEC31 homolog B, COPII coat complex component)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Homo sapiens (human):	SEC31B (SEC31 homolog B, COPII coat complex component)	Alliance	DIOPT (HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Mus musculus (house mouse):	Sec31b (SEC31 homolog B, COPII coat complex component)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Mus musculus (house mouse):	Sec31b (SEC31 homolog B, COPII coat complex component)	Alliance	DIOPT (Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	sec31b (SEC31 homolog B, COPII coat complex component)	Alliance	DIOPT (Ensembl Compara\|OrthoFinder\|PANTHER\|PhylomeDB)
Danio rerio (zebrafish):	sec31b (SEC31 homolog B, COPII coat complex component)	Alliance	DIOPT (OrthoFinder\|PANTHER\|PhylomeDB)
Caenorhabditis elegans (roundworm):	sec-31	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Caenorhabditis elegans (roundworm):	sec-31	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Saccharomyces cerevisiae (baker's yeast):	SEC31	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Saccharomyces cerevisiae (baker's yeast):	SEC31	Alliance	DIOPT (Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Drosophila melanogaster (fruit fly):	Sec31	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoInspector\|PANTHER\|SonicParanoid)
Drosophila melanogaster (fruit fly):	Sec31	Alliance	DIOPT (Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	sec31b	Alliance	DIOPT (Ensembl Compara\|OMA\|OrthoFinder\|PANTHER)

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	1	253,324,081 - 253,353,779 (-)	NCBI		GRCr8
GRCr8 Ensembl	1	253,327,232 - 253,353,779 (-)	Ensembl		GRCr8 Ensembl
mRatBN7.2	1	243,376,283 - 243,404,557 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	1	243,378,456 - 243,404,557 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	1	251,524,347 - 251,549,778 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	1	258,225,458 - 258,250,968 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	1	250,874,538 - 250,899,977 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	1	264,266,279 - 264,294,687 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	1	264,268,338 - 264,294,630 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	1	271,709,442 - 271,737,734 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	1	249,567,756 - 249,593,300 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
Celera	1	239,193,219 - 239,218,674 (-)	NCBI		Celera
Cytogenetic Map	1	q54	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

2,3,7,8-tetrachlorodibenzodioxine (EXP,ISO)

4,4'-sulfonyldiphenol (ISO)

5-fluorouracil (ISO)

acetamide (EXP)

acrolein (ISO)

acrylamide (EXP)

aflatoxin B1 (ISO)

aldehydo-D-glucose (ISO)

alpha-pinene (ISO)

amphetamine (EXP)

aristolochic acid A (ISO)

benzo[a]pyrene (ISO)

beta-lapachone (ISO)

bis(2-ethylhexyl) phthalate (ISO)

bisphenol A (EXP,ISO)

bisphenol F (ISO)

butanal (ISO)

CGP 52608 (ISO)

cisplatin (ISO)

copper(II) sulfate (ISO)

D-glucose (ISO)

doxorubicin (ISO)

endosulfan (EXP)

glucose (ISO)

inulin (ISO)

methotrexate (ISO)

methylmercury chloride (ISO)

okadaic acid (ISO)

ozone (ISO)

paracetamol (EXP)

perfluorooctane-1-sulfonic acid (ISO)

pioglitazone (ISO)

sodium arsenite (ISO)

thioacetamide (EXP)

titanium dioxide (ISO)

triazines (ISO)

triptonide (ISO)

tris(2-butoxyethyl) phosphate (ISO)

vincristine (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

COPII-coated vesicle cargo loading (IBA)

endoplasmic reticulum organization (IBA)

endoplasmic reticulum to Golgi vesicle-mediated transport (IEA)

protein transport (IEA)

vesicle-mediated transport (IEA)

Cellular Component

COPII vesicle coat (IBA)

cytoplasm (IEA)

cytoplasmic vesicle (IEA)

endoplasmic reticulum (IEA)

endoplasmic reticulum exit site (IBA)

endoplasmic reticulum membrane (IEA)

ER to Golgi transport vesicle membrane (IEA)

membrane (IEA)

vesicle coat (ISO)

Molecular Function

structural molecule activity (IBA)

Molecular Pathway Annotations Click to see Annotation Detail View

Endoplasmic Reticulum-associated degradation pathway (IEA)

References

References - curated

#	Reference Title	Reference Citation
1.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2.	KEGG Annotation Import Pipeline	Pipeline to import KEGG annotations from KEGG into RGD
3.	ClinVar Automated Import and Annotation Pipeline	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
4.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

Additional References at PubMed

PMID:22792322

Genomics

Comparative Map Data

Sec31b
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	1	253,324,081 - 253,353,779 (-)	NCBI		GRCr8
GRCr8 Ensembl	1	253,327,232 - 253,353,779 (-)	Ensembl		GRCr8 Ensembl
mRatBN7.2	1	243,376,283 - 243,404,557 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	1	243,378,456 - 243,404,557 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	1	251,524,347 - 251,549,778 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	1	258,225,458 - 258,250,968 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	1	250,874,538 - 250,899,977 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	1	264,266,279 - 264,294,687 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	1	264,268,338 - 264,294,630 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	1	271,709,442 - 271,737,734 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	1	249,567,756 - 249,593,300 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
Celera	1	239,193,219 - 239,218,674 (-)	NCBI		Celera
Cytogenetic Map	1	q54	NCBI

SEC31B
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	10	100,486,647 - 100,519,861 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	10	100,486,646 - 100,519,864 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	10	102,246,404 - 102,279,618 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	10	102,236,393 - 102,269,585 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Celera	10	95,984,251 - 96,017,442 (-)	NCBI		Celera
Cytogenetic Map	10	q24.31	NCBI
HuRef	10	95,875,263 - 95,908,412 (-)	NCBI		HuRef
CHM1_1	10	102,531,040 - 102,564,247 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	10	101,369,754 - 101,402,965 (-)	NCBI		T2T-CHM13v2.0

Sec31b
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	19	44,505,396 - 44,534,287 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	19	44,505,396 - 44,534,303 (-)	Ensembl		GRCm39 Ensembl
GRCm38	19	44,516,957 - 44,545,848 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	19	44,516,957 - 44,545,864 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	19	44,591,447 - 44,620,338 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	19	44,570,268 - 44,599,159 (-)	NCBI		MGSCv36	mm8
Celera	19	45,284,673 - 45,313,471 (-)	NCBI		Celera
Cytogenetic Map	19	C3	NCBI
cM Map	19	37.98	NCBI

Sec31b
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0	NW_004955485	9,615,879 - 9,655,826 (+)	NCBI	ChiLan1.0	ChiLan1.0

SEC31B
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	8	112,370,529 - 112,406,135 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	10	112,375,843 - 112,408,915 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	10	97,086,792 - 97,120,604 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	10	100,567,924 - 100,600,952 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	10	100,568,891 - 100,598,141 (-)	Ensembl	panpan1.1		panPan2

SEC31B
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	28	13,210,213 - 13,246,170 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	28	13,200,000 - 13,243,682 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	28	13,357,182 - 13,417,188 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	28	13,655,397 - 13,715,439 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	28	13,658,388 - 13,717,164 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	28	13,201,826 - 13,261,919 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	28	13,240,326 - 13,303,536 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	28	13,402,557 - 13,434,535 (-)	NCBI		UU_Cfam_GSD_1.0

Sec31b
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024407213	33,525,170 - 33,559,191 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936600	5,129,947 - 5,162,427 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936600	5,129,047 - 5,162,416 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

SEC31B
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	14	111,588,091 - 111,624,073 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	14	111,585,917 - 111,626,691 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	4	63,919,155 - 63,955,465 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

SEC31B
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	9	93,505,655 - 93,537,525 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	9	93,506,626 - 93,537,155 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666048	54,546,134 - 54,589,271 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Variants

Variants in Sec31b
97 total Variants

miRNA Target Status (No longer updated)

Predicted Target Of

	Summary Value
Count of predictions:	45
Count of miRNA genes:	42
Interacting mature miRNAs:	43
Transcripts:	ENSRNOT00000035758
Prediction methods:	Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCr8)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
1578778	Pur4	Proteinuria QTL 4	3.3	0.003	urine total protein amount (VT:0000032)	urine total protein excretion rate (CMO:0000756)	1	160111531	262090437	Rat
1354646	Kidm18	Kidney mass QTL 18	5.7		kidney mass (VT:0002707)	calculated kidney weight (CMO:0000160)	1	160573753	266453731	Rat
1354652	Kidm20	Kidney mass QTL 20	4.3		kidney mass (VT:0002707)	calculated kidney weight (CMO:0000160)	1	186658830	266453731	Rat
2293674	Bss39	Bone structure and strength QTL 39	7.1	0.0001	femur strength trait (VT:0010010)	femur total energy absorbed before break (CMO:0001677)	1	210980612	255980612	Rat
61327	Eae7	Experimental allergic encephalomyelitis QTL 7	5.6		body mass (VT:0001259)	change in body weight (CMO:0002045)	1	226175591	270518180	Rat
1578775	Iddm21	Insulin dependent diabetes mellitus QTL 21	4.13		blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	1	245782829	270518180	Rat
1600395	Niddm69	Non-insulin dependent diabetes mellitus QTL 69	4.14	0.0002	blood insulin amount (VT:0001560)	plasma insulin level (CMO:0000342)	1	205233991	267096252	Rat
1578763	Kidm29	Kidney mass QTL 29	3.3	0.0001	kidney mass (VT:0002707)	both kidneys wet weight (CMO:0000085)	1	218829748	263829748	Rat
1354624	Cm35	Cardiac mass QTL35	5.7		heart left ventricle mass (VT:0007031)	calculated heart weight (CMO:0000073)	1	186658830	266453731	Rat
1600396	Niddm68	Non-insulin dependent diabetes mellitus QTL 68	4.97	0.0003	blood glucose amount (VT:0000188)	blood glucose level area under curve (AUC) (CMO:0000350)	1	205233991	267096252	Rat
631837	Niddm35	Non-insulin dependent diabetes mellitus QTL 35		0.01	blood insulin amount (VT:0001560)	serum insulin level (CMO:0000358)	1	248619887	269633915	Rat
1600397	Edcs4	Endometrial carcinoma susceptibility QTL 4	2.2		uterus morphology trait (VT:0001120)	percentage of study population developing endometrioid carcinoma during a period of time (CMO:0001759)	1	176288899	270518180	Rat
631836	Stl31	Serum triglyceride level QTL 31	4.64	5e-06	blood triglyceride amount (VT:0002644)	plasma triglyceride level (CMO:0000548)	1	247133834	270518180	Rat
1549837	Hcar15	Hepatocarcinoma resistance QTL 15		0.05	liver integrity trait (VT:0010547)	liver tumorous lesion number (CMO:0001068)	1	162548015	270518180	Rat
1600388	Niddm67	Non-insulin dependent diabetes mellitus QTL 67	5.84	0.000004	blood glucose amount (VT:0000188)	blood glucose level area under curve (AUC) (CMO:0000350)	1	205233991	267096252	Rat
2293694	Bss38	Bone structure and strength QTL 38	7.05	0.0001	femur strength trait (VT:0010010)	femur stiffness (CMO:0001674)	1	210980612	255980612	Rat
1598853	Memor3	Memory QTL 3	4.5		exploratory behavior trait (VT:0010471)	total horizontal distance resulting from voluntary locomotion in an experimental apparatus (CMO:0001443)	1	152919152	268496042	Rat
1578759	Uae30	Urinary albumin excretion QTL 30	3.3	0.003	urine albumin amount (VT:0002871)	urine albumin excretion rate (CMO:0000757)	1	160111531	262090437	Rat
1300108	Rf8	Renal function QTL 8	3.75		renal blood flow trait (VT:2000006)	absolute change in renal vascular resistance (CMO:0001900)	1	237995023	269633915	Rat
734767	Niddm57	Non-insulin dependent diabetes mellitus QTL 57			body mass (VT:0001259)	body weight (CMO:0000012)	1	233480549	270108840	Rat
1358898	Bp255	Blood pressure QTL 255	3.6		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	1	200449456	256003563	Rat
631215	Stl8	Serum triglyceride level QTL 8	9.27	0.0001	blood triglyceride amount (VT:0002644)	serum triglyceride level (CMO:0000360)	1	234540191	270518180	Rat
631843	Bw116	Body weight QTL 116	4.1	0.016	abdominal adipose amount (VT:1000220)	abdominal fat pad weight (CMO:0000088)	1	233480549	270108840	Rat
731175	Uae20	Urinary albumin excretion QTL 20	3.5	0.0018	urine albumin amount (VT:0002871)	urine albumin excretion rate (CMO:0000757)	1	207163993	269633915	Rat
2300175	Bmd40	Bone mineral density QTL 40	15.4	0.0001	femur mineral mass (VT:0010011)	bone mineral density (CMO:0001226)	1	210980612	255980612	Rat
1354661	Bw33	Body weight QTL 33	5.2		body mass (VT:0001259)	body weight (CMO:0000012)	1	160573753	266453731	Rat
724538	Kidm1	Kidney mass QTL 1	3.2		kidney mass (VT:0002707)	calculated kidney weight (CMO:0000160)	1	223134011	262090599	Rat
2293655	Bss36	Bone structure and strength QTL 36	10.66	0.0001	femur strength trait (VT:0010010)	femur ultimate force (CMO:0001675)	1	210980612	255980612	Rat
724531	Uae5	Urinary albumin excretion QTL 5	4		urine albumin amount (VT:0002871)	urine albumin level (CMO:0000130)	1	160111426	262090599	Rat
2314011	Gluco56	Glucose level QTL 56			blood glucose amount (VT:0000188)	blood glucose level area under curve (AUC) (CMO:0000350)	1	209203273	254203273	Rat
734769	Niddm58	Non-insulin dependent diabetes mellitus QTL 58			body mass (VT:0001259)	body weight (CMO:0000012)	1	225108840	270108840	Rat
724533	Rf51	Renal function QTL 51	5.3	0.0002	kidney plasma flow trait (VT:0005524)	renal plasma flow (CMO:0001914)	1	228180370	266453608	Rat
1354580	Scort1	Serum corticosterone level QTL 1	3.4		blood corticosterone amount (VT:0005345)	blood corticosterone level (CMO:0001172)	1	154961463	266453731	Rat
634313	Niddm43	Non-insulin dependent diabetes mellitus QTL 43			blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	1	208479811	269633915	Rat
70211	Niddm24	Non-insulin dependent diabetes mellitus QTL 24	3.79		blood glucose amount (VT:0000188)	blood glucose level area under curve (AUC) (CMO:0000350)	1	224633915	269633915	Rat
724552	Glom2	Glomerulus QTL 2	3.3	0.0001	kidney glomerulus morphology trait (VT:0005325)	count of superficial glomeruli directly contacting the kidney surface (CMO:0001001)	1	232312773	270518180	Rat
2316896	Gluco57	Glucose level QTL 57	7.2		blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	1	238398865	255849249	Rat
1358916	Kidm22	Kidney mass QTL 22	3.32		kidney mass (VT:0002707)	both kidneys wet weight to body weight ratio (CMO:0000340)	1	212738576	257738576	Rat
2312564	Glom18	Glomerulus QTL 18	2.4	0.003	kidney glomerulus morphology trait (VT:0005325)	index of glomerular damage (CMO:0001135)	1	194786607	262083703	Rat
2292218	Kidm35	Kidney mass QTL 35			kidney mass (VT:0002707)	both kidneys wet weight to body weight ratio (CMO:0000340)	1	208798288	253798288	Rat
61400	Niddm1	Non-insulin dependent diabetes mellitus QTL 1	11		blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	1	228180243	255849249	Rat
1354610	Bw34	Body weight QTL 34	4.1		body mass (VT:0001259)	body weight (CMO:0000012)	1	160573753	266453731	Rat
2293700	Bmd27	Bone mineral density QTL 27	6.6	0.0001	femur mineral mass (VT:0010011)	trabecular volumetric bone mineral density (CMO:0001729)	1	210980612	255980612	Rat
2293701	Bmd34	Bone mineral density QTL 34	8.3	0.0001	femur strength trait (VT:0010010)	femoral neck ultimate force (CMO:0001703)	1	210980612	255980612	Rat
7387289	Uae45	Urinary albumin excretion QTL 45	2.86	0.0021	urine albumin amount (VT:0002871)	urine albumin excretion rate (CMO:0000757)	1	233204160	270518180	Rat
1581544	Rf52	Renal function QTL 52		0.05	urine total protein amount (VT:0000032)	urine protein excretion rate to body weight ratio (CMO:0001099)	1	241569529	269633915	Rat
1600363	Hc6	Hypercalciuria QTL 6	2.7		urine calcium amount (VT:0002985)	urine calcium excretion rate (CMO:0000763)	1	210980612	255980612	Rat
631536	Lnnr2	Liver neoplastic nodule remodeling QTL 2	2.9	0.0005	liver integrity trait (VT:0010547)	liver remodeling tumorous lesion number to liver total tumorous lesion number ratio (CMO:0001705)	1	243953669	270518180	Rat
738032	Hcas5	Hepatocarcinoma susceptibility QTL 5	3.12		liver integrity trait (VT:0010547)	liver tumorous lesion number (CMO:0001068)	1	185857683	270518180	Rat
2302040	Pia35	Pristane induced arthritis QTL 35	3.8	0.001	blood immunoglobulin amount (VT:0002460)	serum immunoglobulin G1 level (CMO:0002115)	1	226175591	270518180	Rat
631669	Iddm9	Insulin dependent diabetes mellitus QTL 9	2.8	0.039	blood glucose amount (VT:0000188)	plasma glucose level (CMO:0000042)	1	233349180	270518180	Rat
7394701	Uae46	Urinary albumin excretion QTL 46	3.6	0.0056	urine albumin amount (VT:0002871)	urine albumin excretion rate (CMO:0000757)	1	210980612	255980612	Rat
1598821	Rf55	Renal function QTL 55	6.3		renal blood flow trait (VT:2000006)	ratio of change in renal blood flow to change in renal perfusion pressure (CMO:0001239)	1	228174566	270518180	Rat

Markers in Region

RH137611

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	1	243,381,527 - 243,382,051 (+)	MAPPER	mRatBN7.2
Rnor_6.0	1	264,271,544 - 264,272,067	NCBI	Rnor6.0
Rnor_5.0	1	271,714,709 - 271,715,232	UniSTS	Rnor5.0
RGSC_v3.4	1	249,570,275 - 249,570,798	UniSTS	RGSC3.4
Celera	1	239,195,738 - 239,196,261	UniSTS
Cytogenetic Map	1	q54	UniSTS

MARC_21710-21711:1036508963:1

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	1	243,386,465 - 243,387,081 (+)	MAPPER	mRatBN7.2
Rnor_6.0	1	264,276,482 - 264,277,097	NCBI	Rnor6.0
Rnor_5.0	1	271,719,647 - 271,720,262	UniSTS	Rnor5.0
RGSC_v3.4	1	249,575,213 - 249,575,828	UniSTS	RGSC3.4
Celera	1	239,200,676 - 239,201,290	UniSTS
Cytogenetic Map	1	q54	UniSTS

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	sensory system	visual system
9	11	49	113	91	90	59	25	59	6	218	97	10	93	45	60	31	17	17

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001135713	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017589278	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017589279	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017589280	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017589281	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017589282	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017589283	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017589284	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017589285	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039080316	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039080320	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039080330	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039080331	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039080332	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039080338	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039080343	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039080345	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039080349	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039080350	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039080353	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063264782	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063264803	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063264823	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_005487399	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AC103018	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH473986	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000001	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000035758 ⟹ ENSRNOP00000038038

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	1	253,327,564 - 253,353,779 (-)	Ensembl
mRatBN7.2 Ensembl	1	243,378,456 - 243,404,557 (-)	Ensembl
Rnor_6.0 Ensembl	1	264,268,338 - 264,294,630 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000141870 ⟹ ENSRNOP00000101165

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	1	253,327,232 - 253,353,779 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000154301 ⟹ ENSRNOP00000101532

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	1	253,327,232 - 253,351,755 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000156785 ⟹ ENSRNOP00000108280

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	1	253,327,232 - 253,351,755 (-)	Ensembl

RefSeq Acc Id:

NM_001135713 ⟹ NP_001129185

RefSeq Status:

PROVISIONAL

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	253,328,233 - 253,353,779 (-)	NCBI
mRatBN7.2	1	243,379,009 - 243,404,557 (-)	NCBI
Rnor_6.0	1	264,269,025 - 264,294,569 (-)	NCBI
Rnor_5.0	1	271,709,442 - 271,737,734 (-)	NCBI
RGSC_v3.4	1	249,567,756 - 249,593,300 (-)	RGD
Celera	1	239,193,219 - 239,218,674 (-)	RGD

Sequence:

show sequence

GCACTCTGAAGCGCTAGGCTGAGACAGGACCGGTTCAGGAGGTCGCCCGTGACCCCTGACCTGG
GCGCTCGGTACAGGGCAGACAATGAAGTTGAAGGAGCTTGAGAAGCCAGCTGTCCAAGCATGGA
GCCCAGCGAAGCAGTACCCTGTGTATCTGGCCACAGGAACATCCGCCCAGCAACTAGATGCCTC
CTTCAGCACAAATGCCACCCTGGAAATATTTGAGGTTGATTTCAGGGACCCTTCTCTGGACTTG
AAACGCAAAGGAATCCTCTCTGTGTCAAGCAGGTTTCACAAGCTAATCTGGGGAAGCTCCAGCA
GTGGGCTTCTGGAGAACACTGGGGTTATTGCTGGTGGAGGAGACAGTGGCATGCTTACCCTATA
CAATGTGACCCACATCCTTTCTCCGGGGAAGGAACCCTTGATTGCCCAGAAACAGAAGCACACA
GGAGCTGTCAGAGCCTTGGACTTTAATCCTTTCCAGGGCAACCTCCTGGCCTCAGGAGCCAGTG
ATTCTGAAATCTTCATTTGGGATTTGAACCACCTGACTGTTCCAATGACACCTGGATCCAAGTC
ACAGAACCCCCCGGAAGACATTAAAGCATTGTCTTGGAACCGCCAAGTCCAGCACATTCTGTCT
TCTGCTCACCCCAGTGGCAAGGCAGTTGTGTGGGATCTCAGGAAGAACGAGCCCATCATCAAAG
TCAGCGACCACAGCAGCAGGATGAACTGCTCAGGCCTGGCCTGGAACCCAGACATAGCCACACA
GTTAGTGCTGTGCTCAGAAGATGACCGGCTCCCAGTGATTCAGCTGTGGGACCTGCGCTTCGCT
TCCTCACCCCTGAAGGTGTTGGAGAGCCACAGCAGGGGCATCTTGTCGGTGTCCTGGAGCCAGG
CTGATGCTGAACTGCTGCTTAGCAGTGCCAAAGACAACCAGATTTTTTGCTGGAATCTGTCAAG
CAGTGAGGTGGTCTACAAGCTACCCACACAGAGCAGCTGGTGCTTTGACGTTCAGTGGTGCCCT
CGGAACCCTCCTGCGTTCTCTGCTGTCTCCTTCGATGGCTGGATCAGTTTGTACTCTGTGATGG
GTAGGAGCTGGGAAGCCCAGCAGCACATGAGGCAGGCTGACAAGATTTCCTCTTCCTTTAGCCA
AGGCCAGCCTCTCCCACCACTGCAGGTGCCTGAGCAGGTGGCCCAAGCATCACTAATTCCTCCC
TTGAAGAAGCCTCCCAAGTGGATGAGAAGGCCGGCAGGCGTTTCATTCGCTTTTGGGGGAAAGC
TGGTTACCTTTGGCCTTCCCAGCATCCCTGTCCAGCAGGTGCCACAGCCTTGTCCCCGCCCTGT
CTTCATCAGTCAAGTCATCACAGAGTCAGAATTCCTGACTCGGTCAGTTGTGCTGCAGGAGGCC
TTGGGATCTGGAAATCTCCTTAATTATTGTCAGAGCAAGATTCAGCAAGCTTCACGGCCAAGTG
AGAAGACGCTCTGGCAGTTTCTGAAGGTGACCTTGGAGCATGATTCCAGACTGAAGTTCCTCAG
GCTGTTAGGTTACAGCAGAGATGAACTTCAGAAGAAGGTGGACACATGCCTGAAGAGTGACTCG
AAATCACAGGAGAGCCCTCAGCTTGAGGCAGTTGACCTCAAAAGTGACAGAGCACACACCCTTT
GCAGCCAGGCCTCCAGACACACTGCCAAGGAAGCCTCTGCATCCTCAGCCTTCTTTGATGAGCT
GATACCTCAGAACATGACTCCCTGGGAGATCCCCACCACAGAAGACACTGATGGGCTCCTGAGC
CAGGCCCTGCTGCTCGGGGAACTGCGGTCTGCTGTGGAGCTCTGTCTGAAAGAGGAACGCTTTG
CTGACGCCATCATCCTGGCTCAGGCTGGGGACGCAGAGCTACTCAAGTGGACACAAGAACGATA
CCTAGCCAAGAGGAGAACCAAAACCTCCTCGCTTCTAGCCTGTGTCGTAAAGAAGAATTGGAAG
GACCTAGTATGTGCCTGTAGCCTGAAGAACTGGAGAGAGGCGCTGGCCTTGCTGCTGACGTATT
CAGGGCCAGAGAAGTTCCCTGAGCTCTGTGACATGCTGGGAGCTCGCATGGAGCACGAGGGAGG
CAGGGAGCTCACCTCTGAAGCCAGGCTGTGCTATGTGTGCTCAGGGAGTGTGGAGCGGCTGGTA
GAGAGCTGGGCAGACTCCCAGCAAGCCTCGAGCCCCGTGGCTCTGCAGGAGCTAATGGAGCAGG
TGACGGTCCTCAGCAGGAGCCTGGAGCTCCTCCAGGGTTCTCACAAGATGAGCCCAGGTCCTGC
CACAACACACAGGTTCACCCAGTATGCCAGTCTCCTGGCAGCCCAGGGCAGCCTGGCCATTGCC
ATGAGTGTCCTACCCAGTGACTGTACCCAGCCCGCAGTCCTGCAGCTGAAAGATCGGCTTTTCC
ATGCCCAAGGTTCTACCGTCTTGGGCCGACAGGCTCCTGCTTTCCCGTTTCCCCGCGTTGCTGT
AGGAGCTGCTCTCCACCCAAAAGAGACATCATCACACAGAATGGGATTCCAGCCTCCTCGCCAG
GTCCCAGCTCCATCTGTGAGGCCGAGGGCCGCAGCTCAGCCGTCAGTGATGCCTTTCCTCCCCT
CCCATCCCATCCCTTCTGTGGGCTCGTGGACACAGTCCTCAAGTGACTACAGGGTCCCCAAACC
CCAAGCAACCTTGCCTGTGCATTTCGTCCCTGGAGTAAGGCCTGCTTTCTCTCAGCCACAGCCA
TTCGGAGGACAAAGTGTCCAAGCTATAAACCCTGTTGGATTCTGTGGAACATGGCCTCTTCCTG
GTCCTACTCCAGTCATGGCACCCCCAGATGTCATGCAGCCTGGCTCTACCCACCTGCCTGAAAC
TCCTAGACTGCTCCCTCTGCCTCCTGTGGGACCACCAGGTCCCACCCCTCTGAGCTCCCAACCT
GCAGCCTCTCCTGTCACTTTCTCTGTGGCTCACCCTCCTGGCGGCCCTGGAGCACCACGCTCTA
GTGCCCTCCCGAGCTCTGGCATCTTGGCCACTCGTCCAGGACCCCAGGATACCTGGAAAGTTGC
TCCAGCCTCCCAGGAAAACCTCCAAAGGAAAAAGTTGCCTGAGACATTTATGCCTCCAGCACCA
ATAATTACAGCTCCACTTATGAGCCTTGGCCCTGAGCCACAACAGGCCCTGCTGCCACAGTCCC
TAGTCTCCGGTGCAAGCCTGCCTCCTCCTGGAGCCCCGAGAGAATGCAGCCTGCAGCAACTCCA
GCCACTGCCCCCTGAGAAGACACAGAAAGAGCTGCCCCCAGAGCATCAGTGCCTGAAGGACAGC
TTTGAGGCGCTCCTTCAGCGCTGTTCCCTGACCGCCACTGACCTAAAAACAAAAAGGAAGCTGG
ATGAGGCAGCCCACCGTCTAGAATGTCTATACGAGAAGCTGTGCGAGGGGACACTCTCACCCCA
TGTCCTGGCTGGGCTCCATGAAGTCGCCCGCTGTGTGGATGCAGGAAGCTTTGAACAGGGCCTT
GCAGTGCATGCCCAGGTAGTGAGCTGCAGCAGCTTCAGCGAGGTATCCAGCTTCATGCCTGTCC
TGAAGGCTGTCCTCACCATCGCGCACAAGCTGCAGGGCTAA

hide sequence

RefSeq Acc Id:

XM_017589278 ⟹ XP_017444767

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	253,327,508 - 253,353,036 (-)	NCBI
mRatBN7.2	1	243,378,322 - 243,403,822 (-)	NCBI
Rnor_6.0	1	264,268,411 - 264,293,890 (-)	NCBI

Sequence:

show sequence

TCTTAACGGGGACAGTTAGCAGTTGTACCGGTCAAATGCACTGTTGCTGGTCGCTGCGCTCCTG
TACAGGATGGTTCTGACCAGCAGGTGGCACTGGTGACGGAATAGTGTAGTTCGCTGGTCATAAG
ATACAGCTGAGCTTTACTAGTTTAGAAGCTCCCAGAAAAAACTTAACTGACAACTCCAAACTTT
CTTCAAGCTGGAAAGAATAACAGAAATGAAGGCAGACAATGAAGTTGAAGGAGCTTGAGAAGCC
AGCTGTCCAAGCATGGAGCCCAGCGAAGCAGTACCCTGTGTATCTGGCCACAGGAACATCCGCC
CAGCAACTAGATGCCTCCTTCAGCACAAATGCCACCCTGGAAATATTTGAGGTTGATTTCAGGG
ACCCTTCTCTGGACTTGAAACGCAAAGGAATCCTCTCTGTGTCAAGCAGGTTTCACAAGCTAAT
CTGGGGAAGCTCCAGCAGTGGGCTTCTGGAGAACACTGGGGTTATTGCTGGTGGAGGAGACAGT
GGCATGCTTACCCTATACAATGTGACCCACATCCTTTCTCCGGGGAAGGAACCCTTGATTGCCC
AGAAACAGAAGCACACAGGAGCTGTCAGAGCCTTGGACTTTAATCCTTTCCAGGGCAACCTCCT
GGCCTCAGGAGCCAGTGATTCTGAAATCTTCATTTGGGATTTGAACCACCTGACTGTTCCAATG
ACACCTGGATCCAAGTCACAGAACCCCCCGGAAGACATTAAAGCATTGTCTTGGAACCGCCAAG
TCCAGCACATTCTGTCTTCTGCTCACCCCAGTGGCAAGGCAGTTGTGTGGGATCTCAGGAAGAA
CGAGCCCATCATCAAAGTCAGCGACCACAGCAGCAGGATGAACTGCTCAGGCCTGGCCTGGAAC
CCAGACATAGCCACACAGTTAGTGCTGTGCTCAGAAGATGACCGGCTCCCAGTGATTCAGCTGT
GGGACCTGCGCTTCGCTTCCTCACCCCTGAAGGTGTTGGAGAGCCACAGCAGGGGCATCTTGTC
GGTGTCCTGGAGCCAGGCTGATGCTGAACTGCTGCTTAGCAGTGCCAAAGACAACCAGATTTTT
TGCTGGAATCTGTCAAGCAGTGAGGTGGTCTACAAGCTACCCACACAGAGCAGCTGGTGCTTTG
ACGTTCAGTGGTGCCCTCGGAACCCTCCTGCGTTCTCTGCTGTCTCCTTCGATGGCTGGATCAG
TTTGTACTCTGTGATGGGTAGGAGCTGGGAAGCCCAGCAGCACATGAGGCAGGCTGACAAGATT
TCCTCTTCCTTTAGCCAAGGCCAGCCTCTCCCACCACTGCAGGTGCCTGAGCAGGTGGCCCAAG
CATCACTAATTCCTCCCTTGAAGAAGCCTCCCAAGTGGATGAGAAGGCCGGCAGGCGTTTCATT
CGCTTTTGGGGGAAAGCTGGTTACCTTTGGCCTTCCCAGCATCCCTGTCCAGCAGGTGCCACAG
CCTTGTCCCCGCCCTGTCTTCATCAGTCAAGTCATCACAGAGTCAGAATTCCTGACTCGGTCAG
TTGTGCTGCAGGAGGCCTTGGGATCTGGAAATCTCCTTAATTATTGTCAGAGCAAGATTCAGCA
AGCTTCACGGCCAAGTGAGAAGACGCTCTGGCAGTTTCTGAAGGTGACCTTGGAGCATGATTCC
AGACTGAAGTTCCTCAGGCTGTTAGGTTACAGCAGAGATGAACTTCAGAAGAAGGTGGACACAT
GCCTGAAGAGTGACTCGAAATCACAGGAGAGCCCTCAGCTTGAGGCAGTTGACCTCAAAAGTGA
CAGAGCACACACCCTTTGCAGCCAGGCCTCCAGACACACTGCCAAGGAAGCCTCTGCATCCTCA
GCCTTCTTTGATGAGCTGATACCTCAGAACATGACTCCCTGGGAGATCCCCACCACAGAAGACA
CTGATGGGCTCCTGAGCCAGGCCCTGCTGCTCGGGGAACTGCGGTCTGCTGTGGAGCTCTGTCT
GAAAGAGGAACGCTTTGCTGACGCCATCATCCTGGCTCAGGCTGGGGACGCAGAGCTACTCAAG
TGGACACAAGAACGATACCTAGCCAAGAGGAGAACCAAAACCTCCTCGCTTCTAGCCTGTGTCG
TAAAGAAGAATTGGAAGGACCTAGTATGTGCCTGTAGCCTGAAGAACTGGAGAGAGGCGCTGGC
CTTGCTGCTGACGTATTCAGGGCCAGAGAAGTTCCCTGAGCTCTGTGACATGCTGGGAGCTCGC
ATGGAGCACGAGGGAGGCAGGGAGCTCACCTCTGAAGCCAGGCTGTGCTATGTGTGCTCAGGGA
GTGTGGAGCGGCTGGTAGAGAGCTGGGCAGACTCCCAGCAAGCCTCGAGCCCCGTGGCTCTGCA
GGAGCTAATGGAGCAGGTGACGGTCCTCAGCAGGAGCCTGGAGCTCCTCCAGGGTTCTCACAAG
ATGAGCCCAGGTCCTGCCACAACACACAGGTTCACCCAGTATGCCAGTCTCCTGGCAGCCCAGG
GCAGCCTGGCCATTGCCATGAGTGTCCTACCCAGTGACTGTACCCAGCCCGCAGTCCTGCAGCT
GAAAGATCGGCTTTTCCATGCCCAAGGTTCTACCGTCTTGGGCCGACAGGCTCCTGCTTTCCCG
TTTCCCCGCGTTGCTGTAGGAGCTGCTCTCCACCCAAAAGAGACATCATCACACAGAATGGGAT
TCCAGCCTCCTCGCCAGGTCCCAGCTCCATCTGTGAGGCCGAGGGCCGCAGCTCAGCCGTCAGT
GATGCCTTTCCTCCCCTCCCATCCCATCCCTTCTGTGGGCTCGTGGACACAGTCCTCAAGTGAC
TACAGGGTCCCCAAACCCCAAGCAACCTTGCCTGTGCATTTCGTCCCTGGAGTAAGGCCTGCTT
TCTCTCAGCCACAGCCATTCGGAGGACAAAGTGTCCAAGCTATAAACCCTGTTGGATTCTGTGG
AACATGGCCTCTTCCTGGTCCTACTCCAGTCATGGCACCCCCAGATGTCATGCAGCCTGGCTCT
ACCCACCTGCCTGAAACTCCTAGACTGCTCCCTCTGCCTCCTGTGGGACCACCAGGTCCCACCC
CTCTGAGCTCCCAACCTGCAGCCTCTCCTGTCACTTTCTCTGTGGCTCACCCTCCTGGCGGCCC
TGGAGCACCACGCTCTAGTGCCCTCCCGAGCTCTGGCATCTTGGCCACTCGTCCAGGACCCCAG
GATACCTGGAAAGTTGCTCCAGCCTCCCAGGAAAACCTCCAAAGGAAAAAGTTGCCTGAGACAT
TTATGCCTCCAGCACCAATAATTACAGCTCCACTTATGAGCCTTGGCCCTGAGCCACAACAGGC
CCTGCTGCCACAGTCCCTAGTCTCCGGTGCAAGCCTGCCTCCTCCTGGAGCCCCGAGAGAATGC
AGCCTGCAGCAACTCCAGCCACTGCCCCCTGAGAAGACACAGAAAGAGCTGCCCCCAGAGCATC
AGTGCCTGAAGGACAGCTTTGAGGCGCTCCTTCAGCGCTGTTCCCTGACCGCCACTGACCTAAA
AACAAAAAGGAAGCTGGATGAGGCAGCCCACCGTCTAGAATGTCTATACGAGAAGCTGTGCGAG
GGGACACTCTCACCCCATGTCCTGGCTGGGCTCCATGAAGTCGCCCGCTGTGTGGATGCAGGAA
GCTTTGAACAGGGCCTTGCAGTGCATGCCCAGGTAGTGAGCTGCAGCAGCTTCAGCGAGGTATC
CAGCTTCATGCCTGTCCTGAAGGCTGTCCTCACCATCGCGCACAAGCTGCAGGGCTAAGTCAGC
ATTCCCTTCTACCAGGAGGCCACCTCTGCTGCTATTTAATATGTGGCAGAAAGGGAGTCGGTTT
TCAACAGAGTGTATTTCCCCTATCTCTTCCCTTGCTGCCAGGTATTTGATGCTGGGGGCTTGGT
CCCACCCCGGCTGAGTGTCTCCATCTTATCCCTTTATGCCTGGCCTCCTGAGGCTTCCCCTGGG
TGCTTAGAGGTGATGCTCAGAGTTGGACCTTACTTTCTCTAATGTAGTAGCCCAACTCGGTCTG
CACCAGCATGCCTTACACGGGATATTCTGTTCAGATGGCTTCCGAGAGAGTCAACAGTGTTGTT
AGTCAGTCTGCCTCTGCCACGACTCATCTTACAGGTCTTCTGTTTTCTCTTTTCTGGAGCTTGA
GTCTAACTGTACTTTCCCTCTACCGCTGTCTTCCTATCTTAAAGTCCATGTTCTGTTGTAGCCC
CATGGAATTGGGGAGAATTGGCTGACATTTACTTTTTTAACAAGTCATGGGCATAAGGTATTGA
ATAAAATCAAGAGAGGAAACTGGACTTTTAAAAAAAAAAAATGGAACTTTTTACCAGTGGTGGT
GGCATAGGCCTTTAATCCCAGCACTTGAGAGG

hide sequence

RefSeq Acc Id:

XM_017589279 ⟹ XP_017444768

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	253,327,508 - 253,353,551 (-)	NCBI
mRatBN7.2	1	243,378,322 - 243,404,331 (-)	NCBI
Rnor_6.0	1	264,268,411 - 264,294,357 (-)	NCBI

Sequence:

show sequence

ATGGACGAGGTCCCGCTCCCCCTGCCACGCCGTGTCCCCCAACCCCGCCGAGGTCCAGCGGCAC
TGCGCGCGCCTCCTCTTCTCCAGGCCTTGACTTGACTCGGCCAGGAGCCCGCACCCAGTCGCGG
CGCCCTGGCCACTTGTAACTGATCGTCAAGTGCCTTGTATGGCAGTTGGCGGGGCAGACAATGA
AGTTGAAGGAGCTTGAGAAGCCAGCTGTCCAAGCATGGAGCCCAGCGAAGCAGTACCCTGTGTA
TCTGGCCACAGGAACATCCGCCCAGCAACTAGATGCCTCCTTCAGCACAAATGCCACCCTGGAA
ATATTTGAGGTTGATTTCAGGGACCCTTCTCTGGACTTGAAACGCAAAGGAATCCTCTCTGTGT
CAAGCAGGTTTCACAAGCTAATCTGGGGAAGCTCCAGCAGTGGGCTTCTGGAGAACACTGGGGT
TATTGCTGGTGGAGGAGACAGTGGCATGCTTACCCTATACAATGTGACCCACATCCTTTCTCCG
GGGAAGGAACCCTTGATTGCCCAGAAACAGAAGCACACAGGAGCTGTCAGAGCCTTGGACTTTA
ATCCTTTCCAGGGCAACCTCCTGGCCTCAGGAGCCAGTGATTCTGAAATCTTCATTTGGGATTT
GAACCACCTGACTGTTCCAATGACACCTGGATCCAAGTCACAGAACCCCCCGGAAGACATTAAA
GCATTGTCTTGGAACCGCCAAGTCCAGCACATTCTGTCTTCTGCTCACCCCAGTGGCAAGGCAG
TTGTGTGGGATCTCAGGAAGAACGAGCCCATCATCAAAGTCAGCGACCACAGCAGCAGGATGAA
CTGCTCAGGCCTGGCCTGGAACCCAGACATAGCCACACAGTTAGTGCTGTGCTCAGAAGATGAC
CGGCTCCCAGTGATTCAGCTGTGGGACCTGCGCTTCGCTTCCTCACCCCTGAAGGTGTTGGAGA
GCCACAGCAGGGGCATCTTGTCGGTGTCCTGGAGCCAGGCTGATGCTGAACTGCTGCTTAGCAG
TGCCAAAGACAACCAGATTTTTTGCTGGAATCTGTCAAGCAGTGAGGTGGTCTACAAGCTACCC
ACACAGAGCAGCTGGTGCTTTGACGTTCAGTGGTGCCCTCGGAACCCTCCTGCGTTCTCTGCTG
TCTCCTTCGATGGCTGGATCAGTTTGTACTCTGTGATGGGTAGGAGCTGGGAAGCCCAGCAGCA
CATGAGGCAGGCTGACAAGATTTCCTCTTCCTTTAGCCAAGGCCAGCCTCTCCCACCACTGCAG
GTGCCTGAGCAGGTGGCCCAAGCATCACTAATTCCTCCCTTGAAGAAGCCTCCCAAGTGGATGA
GAAGGCCGGCAGGCGTTTCATTCGCTTTTGGGGGAAAGCTGGTTACCTTTGGCCTTCCCAGCAT
CCCTGTCCAGCAGGTGCCACAGCCTTGTCCCCGCCCTGTCTTCATCAGTCAAGTCATCACAGAG
TCAGAATTCCTGACTCGGTCAGTTGTGCTGCAGGAGGCCTTGGGATCTGGAAATCTCCTTAATT
ATTGTCAGAGCAAGATTCAGCAAGCTTCACGGCCAAGTGAGAAGACGCTCTGGCAGTTTCTGAA
GGTGACCTTGGAGCATGATTCCAGACTGAAGTTCCTCAGGCTGTTAGGTTACAGCAGAGATGAA
CTTCAGAAGAAGGTGGACACATGCCTGAAGAGTGACTCGAAATCACAGGAGAGCCCTCAGCTTG
AGGCAGTTGACCTCAAAAGTGACAGAGCACACACCCTTTGCAGCCAGGCCTCCAGACACACTGC
CAAGGAAGCCTCTGCATCCTCAGCCTTCTTTGATGAGCTGATACCTCAGAACATGACTCCCTGG
GAGATCCCCACCACAGAAGACACTGATGGGCTCCTGAGCCAGGCCCTGCTGCTCGGGGAACTGC
GGTCTGCTGTGGAGCTCTGTCTGAAAGAGGAACGCTTTGCTGACGCCATCATCCTGGCTCAGGC
TGGGGACGCAGAGCTACTCAAGTGGACACAAGAACGATACCTAGCCAAGAGGAGAACCAAAACC
TCCTCGCTTCTAGCCTGTGTCGTAAAGAAGAATTGGAAGGACCTAGTATGTGCCTGTAGCCTGA
AGAACTGGAGAGAGGCGCTGGCCTTGCTGCTGACGTATTCAGGGCCAGAGAAGTTCCCTGAGCT
CTGTGACATGCTGGGAGCTCGCATGGAGCACGAGGGAGGCAGGGAGCTCACCTCTGAAGCCAGG
CTGTGCTATGTGTGCTCAGGGAGTGTGGAGCGGCTGGTAGAGAGCTGGGCAGACTCCCAGCAAG
CCTCGAGCCCCGTGGCTCTGCAGGAGCTAATGGAGCAGGTGACGGTCCTCAGCAGGAGCCTGGA
GCTCCTCCAGGGTTCTCACAAGATGAGCCCAGGTCCTGCCACAACACACAGGTTCACCCAGTAT
GCCAGTCTCCTGGCAGCCCAGGGCAGCCTGGCCATTGCCATGAGTGTCCTACCCAGTGACTGTA
CCCAGCCCGCAGTCCTGCAGCTGAAAGATCGGCTTTTCCATGCCCAAGGTTCTACCGTCTTGGG
CCGACAGGCTCCTGCTTTCCCGTTTCCCCGCGTTGCTGTAGGAGCTGCTCTCCACCCAAAAGAG
ACATCATCACACAGAATGGGATTCCAGCCTCCTCGCCAGGTCCCAGCTCCATCTGTGAGGCCGA
GGGCCGCAGCTCAGCCGTCAGTGATGCCTTTCCTCCCCTCCCATCCCATCCCTTCTGTGGGCTC
GTGGACACAGTCCTCAAGTGACTACAGGGTCCCCAAACCCCAAGCAACCTTGCCTGTGCATTTC
GTCCCTGGAGTAAGGCCTGCTTTCTCTCAGCCACAGCCATTCGGAGGACAAAGTGTCCAAGCTA
TAAACCCTGTTGGATTCTGTGGAACATGGCCTCTTCCTGGTCCTACTCCAGTCATGGCACCCCC
AGATGTCATGCAGCCTGGCTCTACCCACCTGCCTGAAACTCCTAGACTGCTCCCTCTGCCTCCT
GTGGGACCACCAGGTCCCACCCCTCTGAGCTCCCAACCTGCAGCCTCTCCTGTCACTTTCTCTG
TGGCTCACCCTCCTGGCGGCCCTGGAGCACCACGCTCTAGTGCCCTCCCGAGCTCTGGCATCTT
GGCCACTCGTCCAGGACCCCAGGATACCTGGAAAGTTGCTCCAGCCTCCCAGGAAAACCTCCAA
AGGAAAAAGTTGCCTGAGACATTTATGCCTCCAGCACCAATAATTACAGCTCCACTTATGAGCC
TTGGCCCTGAGCCACAACAGGCCCTGCTGCCACAGTCCCTAGTCTCCGGTGCAAGCCTGCCTCC
TCCTGGAGCCCCGAGAGAATGCAGCCTGCAGCAACTCCAGCCACTGCCCCCTGAGAAGACACAG
AAAGAGCTGCCCCCAGAGCATCAGTGCCTGAAGGACAGCTTTGAGGCGCTCCTTCAGCGCTGTT
CCCTGACCGCCACTGACCTAAAAACAAAAAGGAAGCTGGATGAGGCAGCCCACCGTCTAGAATG
TCTATACGAGAAGCTGTGCGAGGGGACACTCTCACCCCATGTCCTGGCTGGGCTCCATGAAGTC
GCCCGCTGTGTGGATGCAGGAAGCTTTGAACAGGGCCTTGCAGTGCATGCCCAGGTAGTGAGCT
GCAGCAGCTTCAGCGAGGTATCCAGCTTCATGCCTGTCCTGAAGGCTGTCCTCACCATCGCGCA
CAAGCTGCAGGGCTAAGTCAGCATTCCCTTCTACCAGGAGGCCACCTCTGCTGCTATTTAATAT
GTGGCAGAAAGGGAGTCGGTTTTCAACAGAGTGTATTTCCCCTATCTCTTCCCTTGCTGCCAGG
TATTTGATGCTGGGGGCTTGGTCCCACCCCGGCTGAGTGTCTCCATCTTATCCCTTTATGCCTG
GCCTCCTGAGGCTTCCCCTGGGTGCTTAGAGGTGATGCTCAGAGTTGGACCTTACTTTCTCTAA
TGTAGTAGCCCAACTCGGTCTGCACCAGCATGCCTTACACGGGATATTCTGTTCAGATGGCTTC
CGAGAGAGTCAACAGTGTTGTTAGTCAGTCTGCCTCTGCCACGACTCATCTTACAGGTCTTCTG
TTTTCTCTTTTCTGGAGCTTGAGTCTAACTGTACTTTCCCTCTACCGCTGTCTTCCTATCTTAA
AGTCCATGTTCTGTTGTAGCCCCATGGAATTGGGGAGAATTGGCTGACATTTACTTTTTTAACA
AGTCATGGGCATAAGGTATTGAATAAAATCAAGAGAGGAAACTGGACTTTTAAAAAAAAAAAAT
GGAACTTTTTACCAGTGGTGGTGGCATAGGCCTTTAATCCCAGCACTTGAGAGG

hide sequence

RefSeq Acc Id:

XM_017589280 ⟹ XP_017444769

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	253,327,508 - 253,353,693 (-)	NCBI
mRatBN7.2	1	243,378,322 - 243,404,471 (-)	NCBI
Rnor_6.0	1	264,268,411 - 264,294,483 (-)	NCBI

Sequence:

show sequence

CTCCCCCGCGGGTCTGGGGTCCCGGAGCTCCGCTCCTCCCGCGGGAGGGCGCCGGGGAGCTCGC
CGCTCGCCGAGACCCGACCCGGGCTGCCGCGCCTCTGGAACAGCCGGCAGACAATGAAGTTGAA
GGAGCTTGAGAAGCCAGCTGTCCAAGCATGGAGCCCAGCGAAGCAGTACCCTGTGTATCTGGCC
ACAGGAACATCCGCCCAGCAACTAGATGCCTCCTTCAGCACAAATGCCACCCTGGAAATATTTG
AGGTTGATTTCAGGGACCCTTCTCTGGACTTGAAACGCAAAGGAATCCTCTCTGTGTCAAGCAG
GTTTCACAAGCTAATCTGGGGAAGCTCCAGCAGTGGGCTTCTGGAGAACACTGGGGTTATTGCT
GGTGGAGGAGACAGTGGCATGCTTACCCTATACAATGTGACCCACATCCTTTCTCCGGGGAAGG
AACCCTTGATTGCCCAGAAACAGAAGCACACAGGAGCTGTCAGAGCCTTGGACTTTAATCCTTT
CCAGGGCAACCTCCTGGCCTCAGGAGCCAGTGATTCTGAAATCTTCATTTGGGATTTGAACCAC
CTGACTGTTCCAATGACACCTGGATCCAAGTCACAGAACCCCCCGGAAGACATTAAAGCATTGT
CTTGGAACCGCCAAGTCCAGCACATTCTGTCTTCTGCTCACCCCAGTGGCAAGGCAGTTGTGTG
GGATCTCAGGAAGAACGAGCCCATCATCAAAGTCAGCGACCACAGCAGCAGGATGAACTGCTCA
GGCCTGGCCTGGAACCCAGACATAGCCACACAGTTAGTGCTGTGCTCAGAAGATGACCGGCTCC
CAGTGATTCAGCTGTGGGACCTGCGCTTCGCTTCCTCACCCCTGAAGGTGTTGGAGAGCCACAG
CAGGGGCATCTTGTCGGTGTCCTGGAGCCAGGCTGATGCTGAACTGCTGCTTAGCAGTGCCAAA
GACAACCAGATTTTTTGCTGGAATCTGTCAAGCAGTGAGGTGGTCTACAAGCTACCCACACAGA
GCAGCTGGTGCTTTGACGTTCAGTGGTGCCCTCGGAACCCTCCTGCGTTCTCTGCTGTCTCCTT
CGATGGCTGGATCAGTTTGTACTCTGTGATGGGTAGGAGCTGGGAAGCCCAGCAGCACATGAGG
CAGGCTGACAAGATTTCCTCTTCCTTTAGCCAAGGCCAGCCTCTCCCACCACTGCAGGTGCCTG
AGCAGGTGGCCCAAGCATCACTAATTCCTCCCTTGAAGAAGCCTCCCAAGTGGATGAGAAGGCC
GGCAGGCGTTTCATTCGCTTTTGGGGGAAAGCTGGTTACCTTTGGCCTTCCCAGCATCCCTGTC
CAGCAGGTGCCACAGCCTTGTCCCCGCCCTGTCTTCATCAGTCAAGTCATCACAGAGTCAGAAT
TCCTGACTCGGTCAGTTGTGCTGCAGGAGGCCTTGGGATCTGGAAATCTCCTTAATTATTGTCA
GAGCAAGATTCAGCAAGCTTCACGGCCAAGTGAGAAGACGCTCTGGCAGTTTCTGAAGGTGACC
TTGGAGCATGATTCCAGACTGAAGTTCCTCAGGCTGTTAGGTTACAGCAGAGATGAACTTCAGA
AGAAGGTGGACACATGCCTGAAGAGTGACTCGAAATCACAGGAGAGCCCTCAGCTTGAGGCAGT
TGACCTCAAAAGTGACAGAGCACACACCCTTTGCAGCCAGGCCTCCAGACACACTGCCAAGGAA
GCCTCTGCATCCTCAGCCTTCTTTGATGAGCTGATACCTCAGAACATGACTCCCTGGGAGATCC
CCACCACAGAAGACACTGATGGGCTCCTGAGCCAGGCCCTGCTGCTCGGGGAACTGCGGTCTGC
TGTGGAGCTCTGTCTGAAAGAGGAACGCTTTGCTGACGCCATCATCCTGGCTCAGGCTGGGGAC
GCAGAGCTACTCAAGTGGACACAAGAACGATACCTAGCCAAGAGGAGAACCAAAACCTCCTCGC
TTCTAGCCTGTGTCGTAAAGAAGAATTGGAAGGACCTAGTATGTGCCTGTAGCCTGAAGAACTG
GAGAGAGGCGCTGGCCTTGCTGCTGACGTATTCAGGGCCAGAGAAGTTCCCTGAGCTCTGTGAC
ATGCTGGGAGCTCGCATGGAGCACGAGGGAGGCAGGGAGCTCACCTCTGAAGCCAGGCTGTGCT
ATGTGTGCTCAGGGAGTGTGGAGCGGCTGGTAGAGAGCTGGGCAGACTCCCAGCAAGCCTCGAG
CCCCGTGGCTCTGCAGGAGCTAATGGAGCAGGTGACGGTCCTCAGCAGGAGCCTGGAGCTCCTC
CAGGGTTCTCACAAGATGAGCCCAGGTCCTGCCACAACACACAGGTTCACCCAGTATGCCAGTC
TCCTGGCAGCCCAGGGCAGCCTGGCCATTGCCATGAGTGTCCTACCCAGTGACTGTACCCAGCC
CGCAGTCCTGCAGCTGAAAGATCGGCTTTTCCATGCCCAAGGTTCTACCGTCTTGGGCCGACAG
GCTCCTGCTTTCCCGTTTCCCCGCGTTGCTGTAGGAGCTGCTCTCCACCCAAAAGAGACATCAT
CACACAGAATGGGATTCCAGCCTCCTCGCCAGGTCCCAGCTCCATCTGTGAGGCCGAGGGCCGC
AGCTCAGCCGTCAGTGATGCCTTTCCTCCCCTCCCATCCCATCCCTTCTGTGGGCTCGTGGACA
CAGTCCTCAAGTGACTACAGGGTCCCCAAACCCCAAGCAACCTTGCCTGTGCATTTCGTCCCTG
GAGTAAGGCCTGCTTTCTCTCAGCCACAGCCATTCGGAGGACAAAGTGTCCAAGCTATAAACCC
TGTTGGATTCTGTGGAACATGGCCTCTTCCTGGTCCTACTCCAGTCATGGCACCCCCAGATGTC
ATGCAGCCTGGCTCTACCCACCTGCCTGAAACTCCTAGACTGCTCCCTCTGCCTCCTGTGGGAC
CACCAGGTCCCACCCCTCTGAGCTCCCAACCTGCAGCCTCTCCTGTCACTTTCTCTGTGGCTCA
CCCTCCTGGCGGCCCTGGAGCACCACGCTCTAGTGCCCTCCCGAGCTCTGGCATCTTGGCCACT
CGTCCAGGACCCCAGGATACCTGGAAAGTTGCTCCAGCCTCCCAGGAAAACCTCCAAAGGAAAA
AGTTGCCTGAGACATTTATGCCTCCAGCACCAATAATTACAGCTCCACTTATGAGCCTTGGCCC
TGAGCCACAACAGGCCCTGCTGCCACAGTCCCTAGTCTCCGGTGCAAGCCTGCCTCCTCCTGGA
GCCCCGAGAGAATGCAGCCTGCAGCAACTCCAGCCACTGCCCCCTGAGAAGACACAGAAAGAGC
TGCCCCCAGAGCATCAGTGCCTGAAGGACAGCTTTGAGGCGCTCCTTCAGCGCTGTTCCCTGAC
CGCCACTGACCTAAAAACAAAAAGGAAGCTGGATGAGGCAGCCCACCGTCTAGAATGTCTATAC
GAGAAGCTGTGCGAGGGGACACTCTCACCCCATGTCCTGGCTGGGCTCCATGAAGTCGCCCGCT
GTGTGGATGCAGGAAGCTTTGAACAGGGCCTTGCAGTGCATGCCCAGGTAGTGAGCTGCAGCAG
CTTCAGCGAGGTATCCAGCTTCATGCCTGTCCTGAAGGCTGTCCTCACCATCGCGCACAAGCTG
CAGGGCTAAGTCAGCATTCCCTTCTACCAGGAGGCCACCTCTGCTGCTATTTAATATGTGGCAG
AAAGGGAGTCGGTTTTCAACAGAGTGTATTTCCCCTATCTCTTCCCTTGCTGCCAGGTATTTGA
TGCTGGGGGCTTGGTCCCACCCCGGCTGAGTGTCTCCATCTTATCCCTTTATGCCTGGCCTCCT
GAGGCTTCCCCTGGGTGCTTAGAGGTGATGCTCAGAGTTGGACCTTACTTTCTCTAATGTAGTA
GCCCAACTCGGTCTGCACCAGCATGCCTTACACGGGATATTCTGTTCAGATGGCTTCCGAGAGA
GTCAACAGTGTTGTTAGTCAGTCTGCCTCTGCCACGACTCATCTTACAGGTCTTCTGTTTTCTC
TTTTCTGGAGCTTGAGTCTAACTGTACTTTCCCTCTACCGCTGTCTTCCTATCTTAAAGTCCAT
GTTCTGTTGTAGCCCCATGGAATTGGGGAGAATTGGCTGACATTTACTTTTTTAACAAGTCATG
GGCATAAGGTATTGAATAAAATCAAGAGAGGAAACTGGACTTTTAAAAAAAAAAAATGGAACTT
TTTACCAGTGGTGGTGGCATAGGCCTTTAATCCCAGCACTTGAGAGG

hide sequence

RefSeq Acc Id:

XM_017589284 ⟹ XP_017444773

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	253,327,508 - 253,351,385 (-)	NCBI
mRatBN7.2	1	243,378,322 - 243,402,464 (-)	NCBI
Rnor_6.0	1	264,268,411 - 264,291,832 (-)	NCBI

Sequence:

show sequence

TGGCAGCAATGGCAGCAGCAGCAATGGCAGCAGCAGCAGCACCACCAGCAGCAGCAGCAGTATC
AGGCAGTGTGCAGAGCTGCCTTGCACAAGCCAGGACCACATGTGCCAGGTTTCACAAGCTAATC
TGGGGAAGCTCCAGCAGTGGGCTTCTGGAGAACACTGGGGTTATTGCTGGTGGAGGAGACAGTG
GCATGCTTACCCTATACAATGTGACCCACATCCTTTCTCCGGGGAAGGAACCCTTGATTGCCCA
GAAACAGAAGCACACAGGAGCTGTCAGAGCCTTGGACTTTAATCCTTTCCAGGGCAACCTCCTG
GCCTCAGGAGCCAGTGATTCTGAAATCTTCATTTGGGATTTGAACCACCTGACTGTTCCAATGA
CACCTGGATCCAAGTCACAGAACCCCCCGGAAGACATTAAAGCATTGTCTTGGAACCGCCAAGT
CCAGCACATTCTGTCTTCTGCTCACCCCAGTGGCAAGGCAGTTGTGTGGGATCTCAGGAAGAAC
GAGCCCATCATCAAAGTCAGCGACCACAGCAGCAGGATGAACTGCTCAGGCCTGGCCTGGAACC
CAGACATAGCCACACAGTTAGTGCTGTGCTCAGAAGATGACCGGCTCCCAGTGATTCAGCTGTG
GGACCTGCGCTTCGCTTCCTCACCCCTGAAGGTGTTGGAGAGCCACAGCAGGGGCATCTTGTCG
GTGTCCTGGAGCCAGGCTGATGCTGAACTGCTGCTTAGCAGTGCCAAAGACAACCAGATTTTTT
GCTGGAATCTGTCAAGCAGTGAGGTGGTCTACAAGCTACCCACACAGAGCAGCTGGTGCTTTGA
CGTTCAGTGGTGCCCTCGGAACCCTCCTGCGTTCTCTGCTGTCTCCTTCGATGGCTGGATCAGT
TTGTACTCTGTGATGGGTAGGAGCTGGGAAGCCCAGCAGCACATGAGGCAGGCTGACAAGATTT
CCTCTTCCTTTAGCCAAGGCCAGCCTCTCCCACCACTGCAGGTGCCTGAGCAGGTGGCCCAAGC
ATCACTAATTCCTCCCTTGAAGAAGCCTCCCAAGTGGATGAGAAGGCCGGCAGGCGTTTCATTC
GCTTTTGGGGGAAAGCTGGTTACCTTTGGCCTTCCCAGCATCCCTGTCCAGCAGGTGCCACAGC
CTTGTCCCCGCCCTGTCTTCATCAGTCAAGTCATCACAGAGTCAGAATTCCTGACTCGGTCAGT
TGTGCTGCAGGAGGCCTTGGGATCTGGAAATCTCCTTAATTATTGTCAGAGCAAGATTCAGCAA
GCTTCACGGCCAAGTGAGAAGACGCTCTGGCAGTTTCTGAAGGTGACCTTGGAGCATGATTCCA
GACTGAAGTTCCTCAGGCTGTTAGGTTACAGCAGAGATGAACTTCAGAAGAAGGTGGACACATG
CCTGAAGAGTGACTCGAAATCACAGGAGAGCCCTCAGCTTGAGGCAGTTGACCTCAAAAGTGAC
AGAGCACACACCCTTTGCAGCCAGGCCTCCAGACACACTGCCAAGGAAGCCTCTGCATCCTCAG
CCTTCTTTGATGAGCTGATACCTCAGAACATGACTCCCTGGGAGATCCCCACCACAGAAGACAC
TGATGGGCTCCTGAGCCAGGCCCTGCTGCTCGGGGAACTGCGGTCTGCTGTGGAGCTCTGTCTG
AAAGAGGAACGCTTTGCTGACGCCATCATCCTGGCTCAGGCTGGGGACGCAGAGCTACTCAAGT
GGACACAAGAACGATACCTAGCCAAGAGGAGAACCAAAACCTCCTCGCTTCTAGCCTGTGTCGT
AAAGAAGAATTGGAAGGACCTAGTATGTGCCTGTAGCCTGAAGAACTGGAGAGAGGCGCTGGCC
TTGCTGCTGACGTATTCAGGGCCAGAGAAGTTCCCTGAGCTCTGTGACATGCTGGGAGCTCGCA
TGGAGCACGAGGGAGGCAGGGAGCTCACCTCTGAAGCCAGGCTGTGCTATGTGTGCTCAGGGAG
TGTGGAGCGGCTGGTAGAGAGCTGGGCAGACTCCCAGCAAGCCTCGAGCCCCGTGGCTCTGCAG
GAGCTAATGGAGCAGGTGACGGTCCTCAGCAGGAGCCTGGAGCTCCTCCAGGGTTCTCACAAGA
TGAGCCCAGGTCCTGCCACAACACACAGGTTCACCCAGTATGCCAGTCTCCTGGCAGCCCAGGG
CAGCCTGGCCATTGCCATGAGTGTCCTACCCAGTGACTGTACCCAGCCCGCAGTCCTGCAGCTG
AAAGATCGGCTTTTCCATGCCCAAGGTTCTACCGTCTTGGGCCGACAGGCTCCTGCTTTCCCGT
TTCCCCGCGTTGCTGTAGGAGCTGCTCTCCACCCAAAAGAGACATCATCACACAGAATGGGATT
CCAGCCTCCTCGCCAGGTCCCAGCTCCATCTGTGAGGCCGAGGGCCGCAGCTCAGCCGTCAGTG
ATGCCTTTCCTCCCCTCCCATCCCATCCCTTCTGTGGGCTCGTGGACACAGTCCTCAAGTGACT
ACAGGGTCCCCAAACCCCAAGCAACCTTGCCTGTGCATTTCGTCCCTGGAGTAAGGCCTGCTTT
CTCTCAGCCACAGCCATTCGGAGGACAAAGTGTCCAAGCTATAAACCCTGTTGGATTCTGTGGA
ACATGGCCTCTTCCTGGTCCTACTCCAGTCATGGCACCCCCAGATGTCATGCAGCCTGGCTCTA
CCCACCTGCCTGAAACTCCTAGACTGCTCCCTCTGCCTCCTGTGGGACCACCAGGTCCCACCCC
TCTGAGCTCCCAACCTGCAGCCTCTCCTGTCACTTTCTCTGTGGCTCACCCTCCTGGCGGCCCT
GGAGCACCACGCTCTAGTGCCCTCCCGAGCTCTGGCATCTTGGCCACTCGTCCAGGACCCCAGG
ATACCTGGAAAGTTGCTCCAGCCTCCCAGGAAAACCTCCAAAGGAAAAAGTTGCCTGAGACATT
TATGCCTCCAGCACCAATAATTACAGCTCCACTTATGAGCCTTGGCCCTGAGCCACAACAGGCC
CTGCTGCCACAGTCCCTAGTCTCCGGTGCAAGCCTGCCTCCTCCTGGAGCCCCGAGAGAATGCA
GCCTGCAGCAACTCCAGCCACTGCCCCCTGAGAAGACACAGAAAGAGCTGCCCCCAGAGCATCA
GTGCCTGAAGGACAGCTTTGAGGCGCTCCTTCAGCGCTGTTCCCTGACCGCCACTGACCTAAAA
ACAAAAAGGAAGCTGGATGAGGCAGCCCACCGTCTAGAATGTCTATACGAGAAGCTGTGCGAGG
GGACACTCTCACCCCATGTCCTGGCTGGGCTCCATGAAGTCGCCCGCTGTGTGGATGCAGGAAG
CTTTGAACAGGGCCTTGCAGTGCATGCCCAGGTAGTGAGCTGCAGCAGCTTCAGCGAGGTATCC
AGCTTCATGCCTGTCCTGAAGGCTGTCCTCACCATCGCGCACAAGCTGCAGGGCTAAGTCAGCA
TTCCCTTCTACCAGGAGGCCACCTCTGCTGCTATTTAATATGTGGCAGAAAGGGAGTCGGTTTT
CAACAGAGTGTATTTCCCCTATCTCTTCCCTTGCTGCCAGGTATTTGATGCTGGGGGCTTGGTC
CCACCCCGGCTGAGTGTCTCCATCTTATCCCTTTATGCCTGGCCTCCTGAGGCTTCCCCTGGGT
GCTTAGAGGTGATGCTCAGAGTTGGACCTTACTTTCTCTAATGTAGTAGCCCAACTCGGTCTGC
ACCAGCATGCCTTACACGGGATATTCTGTTCAGATGGCTTCCGAGAGAGTCAACAGTGTTGTTA
GTCAGTCTGCCTCTGCCACGACTCATCTTACAGGTCTTCTGTTTTCTCTTTTCTGGAGCTTGAG
TCTAACTGTACTTTCCCTCTACCGCTGTCTTCCTATCTTAAAGTCCATGTTCTGTTGTAGCCCC
ATGGAATTGGGGAGAATTGGCTGACATTTACTTTTTTAACAAGTCATGGGCATAAGGTATTGAA
TAAAATCAAGAGAGGAAACTGGACTTTTAAAAAAAAAAAATGGAACTTTTTACCAGTGGTGGTG
GCATAGGCCTTTAATCCCAGCACTTGAGAGG

hide sequence

RefSeq Acc Id:

XM_039080316 ⟹ XP_038936244

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	253,327,508 - 253,353,340 (-)	NCBI
mRatBN7.2	1	243,378,322 - 243,404,120 (-)	NCBI

RefSeq Acc Id:

XM_039080320 ⟹ XP_038936248

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	253,327,508 - 253,353,340 (-)	NCBI
mRatBN7.2	1	243,378,322 - 243,404,120 (-)	NCBI

RefSeq Acc Id:

XM_039080330 ⟹ XP_038936258

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	253,327,508 - 253,353,551 (-)	NCBI
mRatBN7.2	1	243,378,322 - 243,404,331 (-)	NCBI

RefSeq Acc Id:

XM_039080331 ⟹ XP_038936259

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	253,327,508 - 253,353,341 (-)	NCBI
mRatBN7.2	1	243,378,322 - 243,404,120 (-)	NCBI

RefSeq Acc Id:

XM_039080332 ⟹ XP_038936260

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	253,327,508 - 253,353,341 (-)	NCBI
mRatBN7.2	1	243,378,322 - 243,404,120 (-)	NCBI

RefSeq Acc Id:

XM_039080338 ⟹ XP_038936266

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	253,325,609 - 253,353,340 (-)	NCBI
mRatBN7.2	1	243,376,283 - 243,404,120 (-)	NCBI

RefSeq Acc Id:

XM_039080343 ⟹ XP_038936271

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	253,325,608 - 253,353,341 (-)	NCBI
mRatBN7.2	1	243,376,283 - 243,404,120 (-)	NCBI

RefSeq Acc Id:

XM_039080345 ⟹ XP_038936273

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	253,330,646 - 253,353,340 (-)	NCBI
mRatBN7.2	1	243,381,422 - 243,404,120 (-)	NCBI

RefSeq Acc Id:

XM_039080349 ⟹ XP_038936277

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	253,330,401 - 253,353,340 (-)	NCBI
mRatBN7.2	1	243,381,180 - 243,404,120 (-)	NCBI

RefSeq Acc Id:

XM_039080350 ⟹ XP_038936278

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	253,330,376 - 253,353,340 (-)	NCBI
mRatBN7.2	1	243,381,161 - 243,404,120 (-)	NCBI

RefSeq Acc Id:

XM_039080353 ⟹ XP_038936281

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	253,334,872 - 253,353,343 (-)	NCBI
mRatBN7.2	1	243,385,648 - 243,404,122 (-)	NCBI

RefSeq Acc Id:

XM_063264782 ⟹ XP_063120852

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	253,324,084 - 253,353,341 (-)	NCBI

RefSeq Acc Id:

XM_063264803 ⟹ XP_063120873

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	253,324,081 - 253,353,341 (-)	NCBI

RefSeq Acc Id:

XM_063264823 ⟹ XP_063120893

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	253,330,646 - 253,353,340 (-)	NCBI

RefSeq Acc Id:

XR_005487399

Type:

NON-CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	253,335,693 - 253,353,343 (-)	NCBI
mRatBN7.2	1	243,386,469 - 243,404,123 (-)	NCBI

Protein Sequences


Protein RefSeqs	NP_001129185	(Get FASTA)	NCBI Sequence Viewer
	XP_017444767	(Get FASTA)	NCBI Sequence Viewer
	XP_017444768	(Get FASTA)	NCBI Sequence Viewer
	XP_017444769	(Get FASTA)	NCBI Sequence Viewer
	XP_017444773	(Get FASTA)	NCBI Sequence Viewer
	XP_038936244	(Get FASTA)	NCBI Sequence Viewer
	XP_038936248	(Get FASTA)	NCBI Sequence Viewer
	XP_038936258	(Get FASTA)	NCBI Sequence Viewer
	XP_038936259	(Get FASTA)	NCBI Sequence Viewer
	XP_038936260	(Get FASTA)	NCBI Sequence Viewer
	XP_038936266	(Get FASTA)	NCBI Sequence Viewer
	XP_038936271	(Get FASTA)	NCBI Sequence Viewer
	XP_038936273	(Get FASTA)	NCBI Sequence Viewer
	XP_038936277	(Get FASTA)	NCBI Sequence Viewer
	XP_038936278	(Get FASTA)	NCBI Sequence Viewer
	XP_038936281	(Get FASTA)	NCBI Sequence Viewer
	XP_063120852	(Get FASTA)	NCBI Sequence Viewer
	XP_063120873	(Get FASTA)	NCBI Sequence Viewer
	XP_063120893	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	EDL94286	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000038038
	ENSRNOP00000038038.6
	ENSRNOP00000101165
	ENSRNOP00000101532

RefSeq Acc Id:

NP_001129185 ⟸ NM_001135713

- UniProtKB:

D4ADQ9 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MKLKELEKPAVQAWSPAKQYPVYLATGTSAQQLDASFSTNATLEIFEVDFRDPSLDLKRKGILS
VSSRFHKLIWGSSSSGLLENTGVIAGGGDSGMLTLYNVTHILSPGKEPLIAQKQKHTGAVRALD
FNPFQGNLLASGASDSEIFIWDLNHLTVPMTPGSKSQNPPEDIKALSWNRQVQHILSSAHPSGK
AVVWDLRKNEPIIKVSDHSSRMNCSGLAWNPDIATQLVLCSEDDRLPVIQLWDLRFASSPLKVL
ESHSRGILSVSWSQADAELLLSSAKDNQIFCWNLSSSEVVYKLPTQSSWCFDVQWCPRNPPAFS
AVSFDGWISLYSVMGRSWEAQQHMRQADKISSSFSQGQPLPPLQVPEQVAQASLIPPLKKPPKW
MRRPAGVSFAFGGKLVTFGLPSIPVQQVPQPCPRPVFISQVITESEFLTRSVVLQEALGSGNLL
NYCQSKIQQASRPSEKTLWQFLKVTLEHDSRLKFLRLLGYSRDELQKKVDTCLKSDSKSQESPQ
LEAVDLKSDRAHTLCSQASRHTAKEASASSAFFDELIPQNMTPWEIPTTEDTDGLLSQALLLGE
LRSAVELCLKEERFADAIILAQAGDAELLKWTQERYLAKRRTKTSSLLACVVKKNWKDLVCACS
LKNWREALALLLTYSGPEKFPELCDMLGARMEHEGGRELTSEARLCYVCSGSVERLVESWADSQ
QASSPVALQELMEQVTVLSRSLELLQGSHKMSPGPATTHRFTQYASLLAAQGSLAIAMSVLPSD
CTQPAVLQLKDRLFHAQGSTVLGRQAPAFPFPRVAVGAALHPKETSSHRMGFQPPRQVPAPSVR
PRAAAQPSVMPFLPSHPIPSVGSWTQSSSDYRVPKPQATLPVHFVPGVRPAFSQPQPFGGQSVQ
AINPVGFCGTWPLPGPTPVMAPPDVMQPGSTHLPETPRLLPLPPVGPPGPTPLSSQPAASPVTF
SVAHPPGGPGAPRSSALPSSGILATRPGPQDTWKVAPASQENLQRKKLPETFMPPAPIITAPLM
SLGPEPQQALLPQSLVSGASLPPPGAPRECSLQQLQPLPPEKTQKELPPEHQCLKDSFEALLQR
CSLTATDLKTKRKLDEAAHRLECLYEKLCEGTLSPHVLAGLHEVARCVDAGSFEQGLAVHAQVV
SCSSFSEVSSFMPVLKAVLTIAHKLQG

hide sequence

RefSeq Acc Id:	XP_017444769 ⟸ XM_017589280
- Peptide Label:	isoform X4
- UniProtKB:	D4ADQ9 (UniProtKB/TrEMBL)
- Sequence:	show sequence MKLKELEKPAVQAWSPAKQYPVYLATGTSAQQLDASFSTNATLEIFEVDFRDPSLDLKRKGILS VSSRFHKLIWGSSSSGLLENTGVIAGGGDSGMLTLYNVTHILSPGKEPLIAQKQKHTGAVRALD FNPFQGNLLASGASDSEIFIWDLNHLTVPMTPGSKSQNPPEDIKALSWNRQVQHILSSAHPSGK AVVWDLRKNEPIIKVSDHSSRMNCSGLAWNPDIATQLVLCSEDDRLPVIQLWDLRFASSPLKVL ESHSRGILSVSWSQADAELLLSSAKDNQIFCWNLSSSEVVYKLPTQSSWCFDVQWCPRNPPAFS AVSFDGWISLYSVMGRSWEAQQHMRQADKISSSFSQGQPLPPLQVPEQVAQASLIPPLKKPPKW MRRPAGVSFAFGGKLVTFGLPSIPVQQVPQPCPRPVFISQVITESEFLTRSVVLQEALGSGNLL NYCQSKIQQASRPSEKTLWQFLKVTLEHDSRLKFLRLLGYSRDELQKKVDTCLKSDSKSQESPQ LEAVDLKSDRAHTLCSQASRHTAKEASASSAFFDELIPQNMTPWEIPTTEDTDGLLSQALLLGE LRSAVELCLKEERFADAIILAQAGDAELLKWTQERYLAKRRTKTSSLLACVVKKNWKDLVCACS LKNWREALALLLTYSGPEKFPELCDMLGARMEHEGGRELTSEARLCYVCSGSVERLVESWADSQ QASSPVALQELMEQVTVLSRSLELLQGSHKMSPGPATTHRFTQYASLLAAQGSLAIAMSVLPSD CTQPAVLQLKDRLFHAQGSTVLGRQAPAFPFPRVAVGAALHPKETSSHRMGFQPPRQVPAPSVR PRAAAQPSVMPFLPSHPIPSVGSWTQSSSDYRVPKPQATLPVHFVPGVRPAFSQPQPFGGQSVQ AINPVGFCGTWPLPGPTPVMAPPDVMQPGSTHLPETPRLLPLPPVGPPGPTPLSSQPAASPVTF SVAHPPGGPGAPRSSALPSSGILATRPGPQDTWKVAPASQENLQRKKLPETFMPPAPIITAPLM SLGPEPQQALLPQSLVSGASLPPPGAPRECSLQQLQPLPPEKTQKELPPEHQCLKDSFEALLQR CSLTATDLKTKRKLDEAAHRLECLYEKLCEGTLSPHVLAGLHEVARCVDAGSFEQGLAVHAQVV SCSSFSEVSSFMPVLKAVLTIAHKLQG hide sequence

RefSeq Acc Id:	XP_017444768 ⟸ XM_017589279
- Peptide Label:	isoform X4
- UniProtKB:	D4ADQ9 (UniProtKB/TrEMBL)
- Sequence:	show sequence MKLKELEKPAVQAWSPAKQYPVYLATGTSAQQLDASFSTNATLEIFEVDFRDPSLDLKRKGILS VSSRFHKLIWGSSSSGLLENTGVIAGGGDSGMLTLYNVTHILSPGKEPLIAQKQKHTGAVRALD FNPFQGNLLASGASDSEIFIWDLNHLTVPMTPGSKSQNPPEDIKALSWNRQVQHILSSAHPSGK AVVWDLRKNEPIIKVSDHSSRMNCSGLAWNPDIATQLVLCSEDDRLPVIQLWDLRFASSPLKVL ESHSRGILSVSWSQADAELLLSSAKDNQIFCWNLSSSEVVYKLPTQSSWCFDVQWCPRNPPAFS AVSFDGWISLYSVMGRSWEAQQHMRQADKISSSFSQGQPLPPLQVPEQVAQASLIPPLKKPPKW MRRPAGVSFAFGGKLVTFGLPSIPVQQVPQPCPRPVFISQVITESEFLTRSVVLQEALGSGNLL NYCQSKIQQASRPSEKTLWQFLKVTLEHDSRLKFLRLLGYSRDELQKKVDTCLKSDSKSQESPQ LEAVDLKSDRAHTLCSQASRHTAKEASASSAFFDELIPQNMTPWEIPTTEDTDGLLSQALLLGE LRSAVELCLKEERFADAIILAQAGDAELLKWTQERYLAKRRTKTSSLLACVVKKNWKDLVCACS LKNWREALALLLTYSGPEKFPELCDMLGARMEHEGGRELTSEARLCYVCSGSVERLVESWADSQ QASSPVALQELMEQVTVLSRSLELLQGSHKMSPGPATTHRFTQYASLLAAQGSLAIAMSVLPSD CTQPAVLQLKDRLFHAQGSTVLGRQAPAFPFPRVAVGAALHPKETSSHRMGFQPPRQVPAPSVR PRAAAQPSVMPFLPSHPIPSVGSWTQSSSDYRVPKPQATLPVHFVPGVRPAFSQPQPFGGQSVQ AINPVGFCGTWPLPGPTPVMAPPDVMQPGSTHLPETPRLLPLPPVGPPGPTPLSSQPAASPVTF SVAHPPGGPGAPRSSALPSSGILATRPGPQDTWKVAPASQENLQRKKLPETFMPPAPIITAPLM SLGPEPQQALLPQSLVSGASLPPPGAPRECSLQQLQPLPPEKTQKELPPEHQCLKDSFEALLQR CSLTATDLKTKRKLDEAAHRLECLYEKLCEGTLSPHVLAGLHEVARCVDAGSFEQGLAVHAQVV SCSSFSEVSSFMPVLKAVLTIAHKLQG hide sequence

RefSeq Acc Id:	XP_017444767 ⟸ XM_017589278
- Peptide Label:	isoform X4
- UniProtKB:	D4ADQ9 (UniProtKB/TrEMBL)
- Sequence:	show sequence MKLKELEKPAVQAWSPAKQYPVYLATGTSAQQLDASFSTNATLEIFEVDFRDPSLDLKRKGILS VSSRFHKLIWGSSSSGLLENTGVIAGGGDSGMLTLYNVTHILSPGKEPLIAQKQKHTGAVRALD FNPFQGNLLASGASDSEIFIWDLNHLTVPMTPGSKSQNPPEDIKALSWNRQVQHILSSAHPSGK AVVWDLRKNEPIIKVSDHSSRMNCSGLAWNPDIATQLVLCSEDDRLPVIQLWDLRFASSPLKVL ESHSRGILSVSWSQADAELLLSSAKDNQIFCWNLSSSEVVYKLPTQSSWCFDVQWCPRNPPAFS AVSFDGWISLYSVMGRSWEAQQHMRQADKISSSFSQGQPLPPLQVPEQVAQASLIPPLKKPPKW MRRPAGVSFAFGGKLVTFGLPSIPVQQVPQPCPRPVFISQVITESEFLTRSVVLQEALGSGNLL NYCQSKIQQASRPSEKTLWQFLKVTLEHDSRLKFLRLLGYSRDELQKKVDTCLKSDSKSQESPQ LEAVDLKSDRAHTLCSQASRHTAKEASASSAFFDELIPQNMTPWEIPTTEDTDGLLSQALLLGE LRSAVELCLKEERFADAIILAQAGDAELLKWTQERYLAKRRTKTSSLLACVVKKNWKDLVCACS LKNWREALALLLTYSGPEKFPELCDMLGARMEHEGGRELTSEARLCYVCSGSVERLVESWADSQ QASSPVALQELMEQVTVLSRSLELLQGSHKMSPGPATTHRFTQYASLLAAQGSLAIAMSVLPSD CTQPAVLQLKDRLFHAQGSTVLGRQAPAFPFPRVAVGAALHPKETSSHRMGFQPPRQVPAPSVR PRAAAQPSVMPFLPSHPIPSVGSWTQSSSDYRVPKPQATLPVHFVPGVRPAFSQPQPFGGQSVQ AINPVGFCGTWPLPGPTPVMAPPDVMQPGSTHLPETPRLLPLPPVGPPGPTPLSSQPAASPVTF SVAHPPGGPGAPRSSALPSSGILATRPGPQDTWKVAPASQENLQRKKLPETFMPPAPIITAPLM SLGPEPQQALLPQSLVSGASLPPPGAPRECSLQQLQPLPPEKTQKELPPEHQCLKDSFEALLQR CSLTATDLKTKRKLDEAAHRLECLYEKLCEGTLSPHVLAGLHEVARCVDAGSFEQGLAVHAQVV SCSSFSEVSSFMPVLKAVLTIAHKLQG hide sequence

RefSeq Acc Id:

XP_017444773 ⟸ XM_017589284

- Peptide Label:

isoform X8

- Sequence:

show sequence

MAAAAMAAAAAPPAAAAVSGSVQSCLAQARTTCARFHKLIWGSSSSGLLENTGVIAGGGDSGML
TLYNVTHILSPGKEPLIAQKQKHTGAVRALDFNPFQGNLLASGASDSEIFIWDLNHLTVPMTPG
SKSQNPPEDIKALSWNRQVQHILSSAHPSGKAVVWDLRKNEPIIKVSDHSSRMNCSGLAWNPDI
ATQLVLCSEDDRLPVIQLWDLRFASSPLKVLESHSRGILSVSWSQADAELLLSSAKDNQIFCWN
LSSSEVVYKLPTQSSWCFDVQWCPRNPPAFSAVSFDGWISLYSVMGRSWEAQQHMRQADKISSS
FSQGQPLPPLQVPEQVAQASLIPPLKKPPKWMRRPAGVSFAFGGKLVTFGLPSIPVQQVPQPCP
RPVFISQVITESEFLTRSVVLQEALGSGNLLNYCQSKIQQASRPSEKTLWQFLKVTLEHDSRLK
FLRLLGYSRDELQKKVDTCLKSDSKSQESPQLEAVDLKSDRAHTLCSQASRHTAKEASASSAFF
DELIPQNMTPWEIPTTEDTDGLLSQALLLGELRSAVELCLKEERFADAIILAQAGDAELLKWTQ
ERYLAKRRTKTSSLLACVVKKNWKDLVCACSLKNWREALALLLTYSGPEKFPELCDMLGARMEH
EGGRELTSEARLCYVCSGSVERLVESWADSQQASSPVALQELMEQVTVLSRSLELLQGSHKMSP
GPATTHRFTQYASLLAAQGSLAIAMSVLPSDCTQPAVLQLKDRLFHAQGSTVLGRQAPAFPFPR
VAVGAALHPKETSSHRMGFQPPRQVPAPSVRPRAAAQPSVMPFLPSHPIPSVGSWTQSSSDYRV
PKPQATLPVHFVPGVRPAFSQPQPFGGQSVQAINPVGFCGTWPLPGPTPVMAPPDVMQPGSTHL
PETPRLLPLPPVGPPGPTPLSSQPAASPVTFSVAHPPGGPGAPRSSALPSSGILATRPGPQDTW
KVAPASQENLQRKKLPETFMPPAPIITAPLMSLGPEPQQALLPQSLVSGASLPPPGAPRECSLQ
QLQPLPPEKTQKELPPEHQCLKDSFEALLQRCSLTATDLKTKRKLDEAAHRLECLYEKLCEGTL
SPHVLAGLHEVARCVDAGSFEQGLAVHAQVVSCSSFSEVSSFMPVLKAVLTIAHKLQG

hide sequence

Ensembl Acc Id:

ENSRNOP00000038038 ⟸ ENSRNOT00000035758

RefSeq Acc Id:	XP_038936271 ⟸ XM_039080343
- Peptide Label:	isoform X10

RefSeq Acc Id:	XP_038936266 ⟸ XM_039080338
- Peptide Label:	isoform X7

RefSeq Acc Id:	XP_038936258 ⟸ XM_039080330
- Peptide Label:	isoform X4
- UniProtKB:	D4ADQ9 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038936248 ⟸ XM_039080320
- Peptide Label:	isoform X3

RefSeq Acc Id:	XP_038936259 ⟸ XM_039080331
- Peptide Label:	isoform X5

RefSeq Acc Id:	XP_038936260 ⟸ XM_039080332
- Peptide Label:	isoform X6

RefSeq Acc Id:	XP_038936244 ⟸ XM_039080316
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_038936278 ⟸ XM_039080350
- Peptide Label:	isoform X13

RefSeq Acc Id:	XP_038936277 ⟸ XM_039080349
- Peptide Label:	isoform X12

RefSeq Acc Id:	XP_038936273 ⟸ XM_039080345
- Peptide Label:	isoform X11

RefSeq Acc Id:	XP_038936281 ⟸ XM_039080353
- Peptide Label:	isoform X15

RefSeq Acc Id:	XP_063120873 ⟸ XM_063264803
- Peptide Label:	isoform X9

RefSeq Acc Id:	XP_063120852 ⟸ XM_063264782
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_063120893 ⟸ XM_063264823
- Peptide Label:	isoform X14

Ensembl Acc Id:

ENSRNOP00000101532 ⟸ ENSRNOT00000154301

Ensembl Acc Id:

ENSRNOP00000101165 ⟸ ENSRNOT00000141870

Ensembl Acc Id:

ENSRNOP00000108280 ⟸ ENSRNOT00000156785

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-D4ADQ9-F1-model_v2	AlphaFold	D4ADQ9	1-1134	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1598329	AgrOrtholog
BioCyc Gene	G2FUF-55586	BioCyc
Ensembl Genes	ENSRNOG00000025781	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSRNOT00000035758	ENTREZGENE
	ENSRNOT00000035758.6	UniProtKB/TrEMBL
	ENSRNOT00000141870	ENTREZGENE
	ENSRNOT00000154301	ENTREZGENE
Gene3D-CATH	1.25.40.1030	UniProtKB/TrEMBL
	2.130.10.10	UniProtKB/TrEMBL
	Functional domain of the splicing factor Prp18	UniProtKB/TrEMBL
InterPro	SEC31-like	UniProtKB/TrEMBL
	WD40/YVTN_repeat-like_dom	UniProtKB/TrEMBL
	WD40_repeat	UniProtKB/TrEMBL
	WD40_repeat_CS	UniProtKB/TrEMBL
	WD40_repeat_dom_sf	UniProtKB/TrEMBL
KEGG Report	rno:309433	UniProtKB/TrEMBL
NCBI Gene	309433	ENTREZGENE
PANTHER	PROTEIN TRANSPORT PROTEIN SEC31B	UniProtKB/TrEMBL
	PTHR13923	UniProtKB/TrEMBL
Pfam	WD40	UniProtKB/TrEMBL
PhenoGen	Sec31b	PhenoGen
PROSITE	WD_REPEATS_1	UniProtKB/TrEMBL
	WD_REPEATS_2	UniProtKB/TrEMBL
	WD_REPEATS_REGION	UniProtKB/TrEMBL
RatGTEx	ENSRNOG00000025781	RatGTEx
SMART	WD40	UniProtKB/TrEMBL
Superfamily-SCOP	WD40_like	UniProtKB/TrEMBL
UniProt	D4ADQ9	ENTREZGENE, UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2015-08-13	Sec31b	SEC31 homolog B, COPII coat complex component	Sec31b	SEC31 homolog B, COPII coating complex component	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2015-07-30	Sec31b	SEC31 homolog B, COPII coating complex component	Sec31b	SEC31 homolog B (S. cerevisiae)	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2009-01-21	Sec31b	SEC31 homolog B (S. cerevisiae)	LOC309433	similar to S. cerevisiae SEC31-like 2 isoform a	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2006-11-20	LOC309433	similar to S. cerevisiae SEC31-like 2 isoform a			Symbol and Name status set to provisional	70820	PROVISIONAL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Annotations - KEGG (archival)