Gas2l3 (growth arrest-specific 2 like 3) - Rat Genome Database

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Gene: Gas2l3 (growth arrest-specific 2 like 3) Rattus norvegicus
Analyze
Symbol: Gas2l3
Name: growth arrest-specific 2 like 3
RGD ID: 1594151
Description: Predicted to enable actin filament binding activity; cytoskeletal anchor activity; and microtubule binding activity. Predicted to be involved in actin crosslink formation and microtubule cytoskeleton organization. Predicted to act upstream of or within response to bacterium. Predicted to be located in actin cytoskeleton and microtubule cytoskeleton. Predicted to be active in actin filament. Orthologous to human GAS2L3 (growth arrest specific 2 like 3); INTERACTS WITH 1-naphthyl isothiocyanate; 2,3,7,8-tetrachlorodibenzodioxine; bisphenol A.
Type: protein-coding
RefSeq Status: MODEL
Previously known as: GAS2-like protein 3; LOC680280; similar to growth arrest-specific 2 like 3
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: mRatBN7.2 - mRatBN7.2 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8725,690,929 - 25,726,806 (-)NCBIGRCr8
mRatBN7.2723,803,578 - 23,836,816 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl723,806,310 - 23,836,411 (-)EnsemblmRatBN7.2 Ensembl
Rnor_6.0729,963,129 - 29,996,021 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl729,959,597 - 29,986,163 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0730,065,394 - 30,097,536 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4726,150,699 - 26,170,382 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera720,953,421 - 20,986,302 (-)NCBICelera
Cytogenetic Map7q13NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. GOA pipeline RGD automated data pipeline
3. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
4. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:21561867   PMID:23012479  


Genomics

Comparative Map Data
Gas2l3
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8725,690,929 - 25,726,806 (-)NCBIGRCr8
mRatBN7.2723,803,578 - 23,836,816 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl723,806,310 - 23,836,411 (-)EnsemblmRatBN7.2 Ensembl
Rnor_6.0729,963,129 - 29,996,021 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl729,959,597 - 29,986,163 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0730,065,394 - 30,097,536 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4726,150,699 - 26,170,382 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera720,953,421 - 20,986,302 (-)NCBICelera
Cytogenetic Map7q13NCBI
GAS2L3
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh3812100,573,684 - 100,628,288 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl12100,573,683 - 100,628,288 (+)EnsemblGRCh38hg38GRCh38
GRCh3712100,967,462 - 101,022,066 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361299,491,620 - 99,542,821 (+)NCBINCBI36Build 36hg18NCBI36
Build 341299,469,956 - 99,521,151NCBI
Celera12100,632,831 - 100,684,032 (+)NCBICelera
Cytogenetic Map12q23.1NCBI
HuRef1298,028,240 - 98,079,437 (+)NCBIHuRef
CHM1_112100,933,512 - 100,984,702 (+)NCBICHM1_1
T2T-CHM13v2.012100,535,086 - 100,589,688 (+)NCBIT2T-CHM13v2.0
Gas2l3
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391089,244,684 - 89,279,935 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1089,244,685 - 89,279,829 (-)EnsemblGRCm39 Ensembl
GRCm381089,408,822 - 89,443,980 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1089,408,823 - 89,443,967 (-)EnsemblGRCm38mm10GRCm38
MGSCv371088,871,568 - 88,906,712 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361088,841,337 - 88,873,775 (-)NCBIMGSCv36mm8
Celera1091,392,360 - 91,430,928 (-)NCBICelera
Cytogenetic Map10C2NCBI
cM Map1044.98NCBI
Gas2l3
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495540536,254,596 - 36,282,722 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495540536,247,179 - 36,278,889 (+)NCBIChiLan1.0ChiLan1.0
GAS2L3
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v210108,637,205 - 108,688,413 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan112108,633,602 - 108,688,181 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01298,152,057 - 98,207,478 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.112101,557,896 - 101,612,257 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl12101,557,942 - 101,612,257 (+)Ensemblpanpan1.1panPan2
GAS2L3
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11539,621,325 - 39,657,759 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1539,622,792 - 39,657,574 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1539,994,617 - 40,032,474 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01540,279,427 - 40,317,288 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1540,280,453 - 40,317,183 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11539,536,436 - 39,574,297 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01539,643,476 - 39,681,219 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01539,917,446 - 39,955,301 (+)NCBIUU_Cfam_GSD_1.0
Gas2l3
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494520,263,135 - 20,295,245 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493649213,273,016 - 13,305,668 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_00493649213,273,600 - 13,305,642 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
GAS2L3
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl583,560,962 - 83,600,329 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1583,558,816 - 83,600,725 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2587,842,047 - 87,871,081 (+)NCBISscrofa10.2Sscrofa10.2susScr3
GAS2L3
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11195,887,658 - 95,940,493 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1195,914,652 - 95,938,435 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_023666037149,095,653 - 149,146,682 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Gas2l3
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_0046247507,168,516 - 7,206,331 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Gas2l3
553 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:185
Count of miRNA genes:105
Interacting mature miRNAs:112
Transcripts:ENSRNOT00000033123, ENSRNOT00000072863
Prediction methods:Microtar, Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
2298550Neuinf6Neuroinflammation QTL 63.3nervous system integrity trait (VT:0010566)spinal cord RT1-B protein level (CMO:0002132)7127829089Rat
7411566Bw136Body weight QTL 13610.40.001body mass (VT:0001259)body weight gain (CMO:0000420)7131962314Rat
9590142Scort5Serum corticosterone level QTL 524.40.001blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)7131962314Rat
724560Plsm3Polydactyly-luxate syndrome (PLS) morphotypes QTL 30.0003tibia length (VT:0004357)tibia length (CMO:0000450)7134000259Rat
2317047Wbc4White blood cell count QTL 40.01leukocyte quantity (VT:0000217)white blood cell count (CMO:0000027)7135342956Rat
61410Bw19Body weight QTL 196.20.001body mass (VT:0001259)body weight (CMO:0000012)7144782185Rat
631503Bp102Blood pressure QTL 1021.9arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)7144822433Rat
1300176Hrtrt10Heart rate QTL 103.19heart pumping trait (VT:2000009)heart rate (CMO:0000002)766427026029351Rat
634336Anxrr17Anxiety related response QTL 173.66locomotor behavior trait (VT:0001392)number of entries into a discrete space in an experimental apparatus (CMO:0000960)7924703115097879Rat
10755438Coatc9Coat color QTL 90coat/hair pigmentation trait (VT:0010463)pigmented ventral coat/hair area to total ventral coat/hair area ratio (CMO:0001812)7352928048529280Rat
9590102Sffal5Serum free fatty acids level QTL 58.620.001blood free fatty acid amount (VT:0001553)plasma free fatty acids level (CMO:0000546)7532901950329019Rat
10755440Coatc10Coat color QTL 100coat/hair pigmentation trait (VT:0010463)pigmented ventral coat/hair area to total ventral coat/hair area ratio (CMO:0001812)7749649952496499Rat
10059592Kidm45Kidney mass QTL 453.950.025kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)7757398552573985Rat
2298547Neuinf5Neuroinflammation QTL 53.7nervous system integrity trait (VT:0010566)spinal cord Cd74 protein level (CMO:0002131)7946224658265113Rat
1643004Pain2Pain QTL 21mechanical nociception trait (VT:0002734)self mutilation severity score (CMO:0002145)7946224698011544Rat
1578652Bmd15Bone mineral density QTL 155.2femur mineral mass (VT:0010011)trabecular volumetric bone mineral density (CMO:0001729)7986646760460686Rat
738033Anxrr6Anxiety related response QTL 64.1exploratory behavior trait (VT:0010471)percentage of entries into a discrete space in an experimental apparatus (CMO:0000961)71557388960573889Rat
1582260Bw72Body weight QTL 723.20.0043body mass (VT:0001259)body weight (CMO:0000012)71579556538073970Rat
1582261Bw69Body weight QTL 693.20.0048body mass (VT:0001259)body weight (CMO:0000012)71579556538073970Rat
1582262Bw75Body weight QTL 7530.0038body mass (VT:0001259)body weight (CMO:0000012)71579556538073970Rat
2317059Aia15Adjuvant induced arthritis QTL 152.46joint integrity trait (VT:0010548)right rear ankle joint diameter (CMO:0002150)71700459862004598Rat
10755451Coatc11Coat color QTL 110coat/hair pigmentation trait (VT:0010463)pigmented ventral coat/hair area to total ventral coat/hair area ratio (CMO:0001812)71794435762944357Rat
70207Niddm31Non-insulin dependent diabetes mellitus QTL 313.9blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)71816950526029351Rat
61369Mcs2Mammary carcinoma susceptibility QTL 23.38mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)71903280735526300Rat
1354637Scl30Serum cholesterol level QTL 303.7blood cholesterol amount (VT:0000180)blood total cholesterol level (CMO:0000051)71965431749753746Rat
1354644Spl4Serum phospholipid level QTL 44.9blood phospholipid amount (VT:0006084)blood phospholipid level (CMO:0001169)71965431749753746Rat
1354639Spl5Serum phospholipid level QTL 53.9blood LDL phospholipid amount (VT:0010505)blood low density lipoprotein phospholipid level (CMO:0001568)71965431752888450Rat
1300132Bp182Blood pressure QTL 1823.49arterial blood pressure trait (VT:2000000)blood pressure time series experimental set point of the baroreceptor response (CMO:0002593)71965431784928080Rat
2290372Gluco33Glucose level QTL 332.71blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)72055570529891047Rat
7411569Bw137Body weight QTL 1370.001body mass (VT:0001259)body weight gain (CMO:0000420)72192119566921195Rat

Markers in Region
D7Rat223  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2723,824,381 - 23,824,614 (+)MAPPERmRatBN7.2
Rnor_6.0729,980,957 - 29,981,189NCBIRnor6.0
Rnor_5.0730,082,488 - 30,082,720UniSTSRnor5.0
RGSC_v3.4726,168,017 - 26,168,250RGDRGSC3.4
RGSC_v3.4726,168,018 - 26,168,250UniSTSRGSC3.4
RGSC_v3.1726,188,288 - 26,188,521RGD
Celera720,971,244 - 20,971,476UniSTS
FHH x ACI Map76.72RGD
FHH x ACI Map76.72UniSTS
Cytogenetic Map7q13UniSTS
RH142456  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2723,828,719 - 23,828,897 (+)MAPPERmRatBN7.2
Rnor_6.0729,985,295 - 29,985,472NCBIRnor6.0
Rnor_5.0730,086,826 - 30,087,003UniSTSRnor5.0
RGSC_v3.4726,172,356 - 26,172,533UniSTSRGSC3.4
Celera720,975,582 - 20,975,759UniSTS
RH 3.4 Map7127.1UniSTS
Cytogenetic Map7q13UniSTS
BE102978  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2723,837,799 - 23,837,981 (+)MAPPERmRatBN7.2
Rnor_6.0729,994,375 - 29,994,556NCBIRnor6.0
Rnor_5.0730,095,906 - 30,096,087UniSTSRnor5.0
RGSC_v3.4726,181,436 - 26,181,617UniSTSRGSC3.4
Celera720,984,656 - 20,984,837UniSTS
RH 3.4 Map7120.8UniSTS
Cytogenetic Map7q13UniSTS
RH139040  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2723,826,999 - 23,827,125 (+)MAPPERmRatBN7.2
Rnor_6.0729,983,575 - 29,983,700NCBIRnor6.0
Rnor_5.0730,085,106 - 30,085,231UniSTSRnor5.0
RGSC_v3.4726,170,636 - 26,170,761UniSTSRGSC3.4
Celera720,973,862 - 20,973,987UniSTS
RH 3.4 Map5838.2UniSTS
Cytogenetic Map7q13UniSTS
UniSTS:236434  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2723,807,468 - 23,807,706 (+)MAPPERmRatBN7.2
Rnor_6.0729,964,042 - 29,964,279NCBIRnor6.0
Rnor_5.0730,065,573 - 30,065,810UniSTSRnor5.0
RGSC_v3.4726,151,103 - 26,151,340UniSTSRGSC3.4
Celera720,954,334 - 20,954,571UniSTS
Cytogenetic Map7q13UniSTS


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system appendage
High
Medium 16 2 2 2 20 12 16
Low 3 22 48 32 19 32 6 6 46 21 25 11 6
Below cutoff 5 7 7 7 2 5 8 2 2

Sequence

Nucleotide Sequences
RefSeq Transcripts XM_001056437 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006241237 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008765306 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008765308 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017595198 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017595199 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017595200 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017603410 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017603411 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017603412 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017603413 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017603414 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017603415 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017603416 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039080081 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063264406 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide JAXUCZ010000007 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

RefSeq Acc Id: ENSRNOT00000033123   ⟹   ENSRNOP00000033340
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.0 Ensembl729,959,597 - 29,986,163 (-)Ensembl
RefSeq Acc Id: ENSRNOT00000120268   ⟹   ENSRNOP00000094564
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl723,806,310 - 23,836,411 (-)Ensembl
RefSeq Acc Id: XM_001056437   ⟹   XP_001056437
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8725,690,929 - 25,716,579 (-)NCBI
mRatBN7.2723,803,578 - 23,829,230 (-)NCBI
Rnor_6.0729,963,129 - 29,985,818 (-)NCBI
Rnor_5.0730,065,394 - 30,097,536 (-)NCBI
RGSC_v3.4726,150,699 - 26,170,382 (-)RGD
Sequence:
RefSeq Acc Id: XM_006241237   ⟹   XP_006241299
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8725,690,929 - 25,716,579 (-)NCBI
mRatBN7.2723,803,578 - 23,829,231 (-)NCBI
Rnor_6.0729,963,129 - 29,985,818 (-)NCBI
Rnor_5.0730,065,394 - 30,097,536 (-)NCBI
Sequence:
RefSeq Acc Id: XM_008765306   ⟹   XP_008763528
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8725,690,929 - 25,726,806 (-)NCBI
mRatBN7.2723,803,578 - 23,836,816 (-)NCBI
Rnor_6.0729,963,129 - 29,996,021 (-)NCBI
Sequence:
RefSeq Acc Id: XM_008765308   ⟹   XP_008763530
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8725,690,929 - 25,726,806 (-)NCBI
mRatBN7.2723,803,578 - 23,836,816 (-)NCBI
Rnor_6.0729,963,129 - 29,996,021 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017595198   ⟹   XP_017450687
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8725,690,929 - 25,726,806 (-)NCBI
mRatBN7.2723,803,578 - 23,836,816 (-)NCBI
Rnor_6.0729,963,129 - 29,996,021 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017595199   ⟹   XP_017450688
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8725,690,929 - 25,726,806 (-)NCBI
mRatBN7.2723,803,578 - 23,836,816 (-)NCBI
Rnor_6.0729,963,129 - 29,996,021 (-)NCBI
Sequence:
RefSeq Acc Id: XM_039080081   ⟹   XP_038936009
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8725,690,929 - 25,726,806 (-)NCBI
mRatBN7.2723,803,578 - 23,836,816 (-)NCBI
RefSeq Acc Id: XM_063264406   ⟹   XP_063120476
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8725,690,929 - 25,723,708 (-)NCBI
RefSeq Acc Id: XP_001056437   ⟸   XM_001056437
- UniProtKB: A0A8I6AL26 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006241299   ⟸   XM_006241237
- UniProtKB: A0A8I6AL26 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_008763528   ⟸   XM_008765306
- UniProtKB: A0A8I6AL26 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_008763530   ⟸   XM_008765308
- UniProtKB: A0A8I6AL26 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_017450688   ⟸   XM_017595199
- UniProtKB: A0A8I6AL26 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_017450687   ⟸   XM_017595198
- UniProtKB: A0A8I6AL26 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSRNOP00000033340   ⟸   ENSRNOT00000033123
RefSeq Acc Id: XP_038936009   ⟸   XM_039080081
- UniProtKB: A0A8I6AL26 (UniProtKB/TrEMBL)
RefSeq Acc Id: ENSRNOP00000094564   ⟸   ENSRNOT00000120268
RefSeq Acc Id: XP_063120476   ⟸   XM_063264406
Protein Domains
Calponin-homology (CH)   GAR

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-D4AB19-F1-model_v2 AlphaFold D4AB19 1-678 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen


Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1594151 AgrOrtholog
BioCyc Gene G2FUF-34493 BioCyc
Ensembl Genes ENSRNOG00000025198 Ensembl
  ENSRNOG00000063755 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000120268.1 UniProtKB/TrEMBL
Gene3D-CATH 1.10.418.10 UniProtKB/TrEMBL
  3.30.920.20 UniProtKB/TrEMBL
InterPro CH-domain UniProtKB/TrEMBL
  CH_dom_sf UniProtKB/TrEMBL
  GAR_dom UniProtKB/TrEMBL
  GAR_dom_sf UniProtKB/TrEMBL
KEGG Report rno:680280 UniProtKB/TrEMBL
NCBI Gene 680280 ENTREZGENE
PANTHER PTHR46756:SF7 UniProtKB/TrEMBL
  TRANSGELIN UniProtKB/TrEMBL
Pfam GAS2 UniProtKB/TrEMBL
  PF00307 UniProtKB/TrEMBL
PhenoGen Gas2l3 PhenoGen
PROSITE GAR UniProtKB/TrEMBL
  PS50021 UniProtKB/TrEMBL
RatGTEx ENSRNOG00000025198 RatGTEx
  ENSRNOG00000063755 RatGTEx
SMART GAS2 UniProtKB/TrEMBL
  SM00033 UniProtKB/TrEMBL
Superfamily-SCOP SSF143575 UniProtKB/TrEMBL
  SSF47576 UniProtKB/TrEMBL
UniProt A0A8I6AL26 ENTREZGENE, UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2022-06-02 Gas2l3  growth arrest-specific 2 like 3  Gas2l3  growth arrest-specific 2 like 3  Data merged from RGD:149736488 737654 PROVISIONAL
2021-08-09 Gas2l3  growth arrest-specific 2 like 3      Symbol and Name status set to provisional 45752 PROVISIONAL
2013-05-24 Gas2l3  growth arrest-specific 2 like 3  LOC687775  similar to growth arrest-specific 2 like 3  Data merged from RGD:1597510 1643240 APPROVED
2008-03-05 Gas2l3  growth arrest-specific 2 like 3  LOC680280  similar to growth arrest-specific 2 like 3  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2006-11-20 LOC680280  similar to growth arrest-specific 2 like 3      Symbol and Name status set to provisional 70820 PROVISIONAL
2006-11-20 LOC687775  similar to growth arrest-specific 2 like 3      Symbol and Name status set to provisional 70820 PROVISIONAL