Lrrtm2 (leucine rich repeat transmembrane neuronal 2) - Rat Genome Database

Send us a Message



Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Gene: Lrrtm2 (leucine rich repeat transmembrane neuronal 2) Rattus norvegicus
Analyze
Symbol: Lrrtm2
Name: leucine rich repeat transmembrane neuronal 2
RGD ID: 1593785
Description: Enables neurexin family protein binding activity. Involved in regulation of postsynaptic density assembly. Acts upstream of or within synapse organization. Located in excitatory synapse. Is active in several cellular components, including Schaffer collateral - CA1 synapse; hippocampal mossy fiber to CA3 synapse; and postsynaptic density membrane. Orthologous to human LRRTM2 (leucine rich repeat transmembrane neuronal 2); INTERACTS WITH 17alpha-ethynylestradiol; acrylamide; bisphenol A.
Type: protein-coding
RefSeq Status: PROVISIONAL
Previously known as: leucine-rich repeat neuronal 2 protein; leucine-rich repeat transmembrane neuronal protein 2; LOC685472; similar to leucine-rich repeat transmembrane neuronal 2 protein
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: mRatBN7.2 - mRatBN7.2 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81827,091,919 - 27,096,967 (-)NCBIGRCr8
mRatBN7.21826,817,816 - 26,822,864 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1826,817,816 - 26,822,864 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1826,945,217 - 26,950,265 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01827,708,134 - 27,713,182 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01827,043,038 - 27,048,086 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01828,012,877 - 28,017,925 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1828,012,877 - 28,017,925 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01827,722,686 - 27,727,734 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41827,722,717 - 27,727,765 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera1826,552,974 - 26,558,022 (-)NCBICelera
Cytogenetic Map18p11NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. Truncating mutations in NRXN2 and NRXN1 in autism spectrum disorders and schizophrenia. Gauthier J, etal., Hum Genet. 2011 Oct;130(4):563-73. doi: 10.1007/s00439-011-0975-z. Epub 2011 Mar 22.
3. An unbiased expression screen for synaptogenic proteins identifies the LRRTM protein family as synaptic organizers. Linhoff MW, etal., Neuron. 2009 Mar 12;61(5):734-49. doi: 10.1016/j.neuron.2009.01.017.
4. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
5. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:21788371   PMID:23931994   PMID:24613359   PMID:27565350  


Genomics

Comparative Map Data
Lrrtm2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81827,091,919 - 27,096,967 (-)NCBIGRCr8
mRatBN7.21826,817,816 - 26,822,864 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1826,817,816 - 26,822,864 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1826,945,217 - 26,950,265 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01827,708,134 - 27,713,182 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01827,043,038 - 27,048,086 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01828,012,877 - 28,017,925 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1828,012,877 - 28,017,925 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01827,722,686 - 27,727,734 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41827,722,717 - 27,727,765 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera1826,552,974 - 26,558,022 (-)NCBICelera
Cytogenetic Map18p11NCBI
LRRTM2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh385138,868,921 - 138,875,335 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl5138,868,921 - 138,875,368 (-)EnsemblGRCh38hg38GRCh38
GRCh375138,204,610 - 138,211,024 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 365138,232,978 - 138,238,908 (-)NCBINCBI36Build 36hg18NCBI36
Build 345138,232,977 - 138,238,908NCBI
Celera5134,326,860 - 134,332,826 (-)NCBICelera
Cytogenetic Map5q31.2NCBI
HuRef5133,394,868 - 133,400,836 (-)NCBIHuRef
CHM1_15137,637,719 - 137,643,697 (-)NCBICHM1_1
T2T-CHM13v2.05139,395,050 - 139,401,453 (-)NCBIT2T-CHM13v2.0
Lrrtm2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391835,342,056 - 35,348,077 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1835,342,056 - 35,348,077 (-)EnsemblGRCm39 Ensembl
GRCm381835,209,003 - 35,215,024 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1835,209,003 - 35,215,024 (-)EnsemblGRCm38mm10GRCm38
MGSCv371835,368,657 - 35,374,678 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361835,336,885 - 35,340,892 (-)NCBIMGSCv36mm8
Celera1835,664,662 - 35,670,684 (-)NCBICelera
Cytogenetic Map18B1NCBI
cM Map1818.94NCBI
Lrrtm2
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554181,636,828 - 1,643,588 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554181,636,906 - 1,643,430 (+)NCBIChiLan1.0ChiLan1.0
LRRTM2
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v24134,143,569 - 134,149,817 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan15132,283,123 - 132,289,371 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v05134,247,933 - 134,254,188 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.15140,373,790 - 140,380,127 (-)NCBIpanpan1.1PanPan1.1panPan2
LRRTM2
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11126,392,642 - 26,397,018 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1126,392,734 - 26,396,223 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1125,159,555 - 25,163,871 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01127,248,202 - 27,252,518 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1127,248,255 - 27,252,533 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11125,955,564 - 25,959,881 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01125,775,869 - 25,782,210 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01126,442,410 - 26,446,727 (-)NCBIUU_Cfam_GSD_1.0
Lrrtm2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024407213153,637,684 - 153,641,722 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365317,967,213 - 7,974,266 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365317,968,111 - 7,973,823 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
LRRTM2
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl2140,803,626 - 140,809,493 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.12140,803,624 - 140,810,013 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.22146,698,365 - 146,704,568 (-)NCBISscrofa10.2Sscrofa10.2susScr3
LRRTM2
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12341,534,757 - 41,540,372 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2341,533,973 - 41,539,915 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366603436,344,313 - 36,349,978 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Lrrtm2
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462474331,644,209 - 31,651,688 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462474331,648,543 - 31,651,772 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Lrrtm2
5 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:91
Count of miRNA genes:73
Interacting mature miRNAs:78
Transcripts:ENSRNOT00000075420
Prediction methods:Microtar, Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
2312598Bp340Blood pressure QTL 3400.05arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)18130558703Rat
2300180Bmd67Bone mineral density QTL 674.80.0001femur mineral mass (VT:0010011)bone mineral density (CMO:0001226)18134291613Rat
2293661Bss50Bone structure and strength QTL 504.640.0003lumbar vertebra size trait (VT:0010518)lumbar vertebra trabecular cross-sectional area (CMO:0001692)18134291613Rat
61388Bp2Blood pressure QTL 23.23arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)18135374722Rat
9589153Insul31Insulin level QTL 317.150.05blood insulin amount (VT:0001560)plasma insulin level (CMO:0000342)18142547119Rat
2299160Iddm35Insulin dependent diabetes mellitus QTL 352.79blood glucose amount (VT:0000188)age at onset/diagnosis of type 1 diabetes mellitus (CMO:0001140)18420794160377792Rat
2312568Glom21Glomerulus QTL 2120.005kidney glomerulus morphology trait (VT:0005325)index of glomerular damage (CMO:0001135)18518585840503530Rat
2293708Bss46Bone structure and strength QTL 468.80.0001lumbar vertebra morphology trait (VT:0010494)lumbar vertebra cortical cross-sectional area (CMO:0001690)181179151863636873Rat
1578661Bss20Bone structure and strength QTL 203.7femur morphology trait (VT:0000559)femoral neck cross-sectional area (CMO:0001697)181179151883218561Rat
1578667Bss21Bone structure and strength QTL 213.5femur morphology trait (VT:0000559)femoral neck cortical cross-sectional area (CMO:0001702)181179151883218561Rat
61382Bp46Blood pressure QTL 4618.8arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)181194179131393320Rat
631264Scl22Serum cholesterol level QTL 226.2blood cholesterol amount (VT:0000180)serum total cholesterol level (CMO:0000363)181194179131393320Rat
1331766Bp236Blood pressure QTL 2363.022arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)181194429931359530Rat
61375Bp41Blood pressure QTL 412.4blood pressure trait (VT:0000183)systolic blood pressure (CMO:0000004)181194429941122201Rat
1331753Bp231Blood pressure QTL 2313.643arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)181194429952293055Rat
1358358Sradr6Stress Responsive Adrenal Weight QTL 62.49adrenal gland mass (VT:0010420)both adrenal glands wet weight (CMO:0000164)181194429959330563Rat
6903359Bp355Blood pressure QTL 3553.6arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)181194454459796478Rat
2313082Bss85Bone structure and strength QTL 850.80.0001long bone metaphysis morphology trait (VT:0000133)tibia midshaft total cross-sectional area (CMO:0001715)181495133759951337Rat
1358193Emca2Estrogen-induced mammary cancer QTL 21.6mammary gland integrity trait (VT:0010552)post-insult time to mammary tumor formation (CMO:0000345)181800759963571040Rat
1331735Rf44Renal function QTL 442.981urine total protein amount (VT:0000032)urine total protein excretion rate (CMO:0000756)181823456431359530Rat
1331775Bp235Blood pressure QTL 2353.201arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)181823456431359530Rat
1600373Mamtr6Mammary tumor resistance QTL 6mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)181927890183218561Rat
1331741Bp232Blood pressure QTL 2323.59112arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)182137289383213037Rat
1641923Colcr8Colorectal carcinoma resistance QTL 83.10.0014intestine integrity trait (VT:0010554)poorly differentiated malignant colorectal tumor number (CMO:0002076)182206624252293055Rat
1331733Bp233Blood pressure QTL 2333.97196arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)182479697779788953Rat
2325839Bp348Blood pressure QTL 3480.001arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)182557098570570985Rat
12904673Cm127Cardiac mass QTL 1270.005heart right ventricle mass (VT:0007033)heart right ventricle weight to body weight ratio (CMO:0000914)182654808246969551Rat
12904675Am19Aortic mass QTL 190.001aorta mass (VT:0002845)aorta weight to aorta length to body weight ratio (CMO:0002722)182654808246969551Rat
12904677Kidm72Kidney mass QTL 720.001kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)182654808246969551Rat
12904668Bw188Body weight QTL 1880.03body mass (VT:0001259)body weight (CMO:0000012)182654808246969551Rat
12904669Cm125Cardiac mass QTL 1250.001heart mass (VT:0007028)heart wet weight to body weight ratio (CMO:0002408)182654808246969551Rat
12904670Cm126Cardiac mass QTL 1260.001heart left ventricle mass (VT:0007031)heart left ventricle weight to body weight ratio (CMO:0000530)182654808246969551Rat
2301413Bp318Blood pressure QTL 3180.002arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)182654808246969551Rat

Markers in Region
BB129880  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21826,819,936 - 26,820,027 (+)MAPPERmRatBN7.2
Rnor_6.01828,014,998 - 28,015,088NCBIRnor6.0
Rnor_5.01827,724,807 - 27,724,897UniSTSRnor5.0
RGSC_v3.41827,724,838 - 27,724,928UniSTSRGSC3.4
Celera1826,555,095 - 26,555,185UniSTS
Cytogenetic Map18p11UniSTS
RH132461  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21826,817,053 - 26,817,235 (+)MAPPERmRatBN7.2
Rnor_6.01828,012,115 - 28,012,296NCBIRnor6.0
Rnor_5.01827,721,874 - 27,722,055UniSTSRnor5.0
RGSC_v3.41827,721,955 - 27,722,136UniSTSRGSC3.4
Celera1826,552,212 - 26,552,393UniSTS
RH 3.4 Map18372.8UniSTS
Cytogenetic Map18p11UniSTS
AI851755  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21826,817,980 - 26,818,087 (+)MAPPERmRatBN7.2
Rnor_6.01828,013,042 - 28,013,148NCBIRnor6.0
Rnor_5.01827,722,851 - 27,722,957UniSTSRnor5.0
RGSC_v3.41827,722,882 - 27,722,988UniSTSRGSC3.4
Celera1826,553,139 - 26,553,245UniSTS
Cytogenetic Map18p11UniSTS
Lrrtm2  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21826,821,028 - 26,821,665 (+)MAPPERmRatBN7.2
Rnor_6.01828,016,090 - 28,016,726NCBIRnor6.0
Rnor_5.01827,725,899 - 27,726,535UniSTSRnor5.0
RGSC_v3.41827,725,930 - 27,726,566UniSTSRGSC3.4
Celera1826,556,187 - 26,556,823UniSTS
Cytogenetic Map18p11UniSTS


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system appendage
High
Medium 58 6 8
Low 8 24 8 16 8 8 8 12 8 3 1 8
Below cutoff 3 5 2 2 2 2 2 4 1 20 2

Sequence


RefSeq Acc Id: ENSRNOT00000075420   ⟹   ENSRNOP00000067172
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1826,817,816 - 26,822,864 (-)Ensembl
Rnor_6.0 Ensembl1828,012,877 - 28,017,925 (-)Ensembl
RefSeq Acc Id: NM_001109469   ⟹   NP_001102939
RefSeq Status: PROVISIONAL
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81827,091,919 - 27,096,967 (-)NCBI
mRatBN7.21826,817,816 - 26,822,864 (-)NCBI
Rnor_6.01828,012,877 - 28,017,925 (-)NCBI
Rnor_5.01827,722,686 - 27,727,734 (-)NCBI
RGSC_v3.41827,722,717 - 27,727,765 (-)RGD
Celera1826,552,974 - 26,558,022 (-)RGD
Sequence:
Protein Sequences
Protein RefSeqs NP_001102939 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein D4A7P2 (Get FASTA)   NCBI Sequence Viewer  
  EDL76254 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSRNOP00000067172
  ENSRNOP00000067172.2
  ENSRNOP00055032244
  ENSRNOP00060038179
  ENSRNOP00065015760
RefSeq Acc Id: NP_001102939   ⟸   NM_001109469
- Peptide Label: precursor
- UniProtKB: D4A7P2 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: ENSRNOP00000067172   ⟸   ENSRNOT00000075420

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-D4A7P2-F1-model_v2 AlphaFold D4A7P2 1-515 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen


Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1593785 AgrOrtholog
BioCyc Gene G2FUF-7916 BioCyc
Ensembl Genes ENSRNOG00000047085 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
  ENSRNOG00055023116 UniProtKB/Swiss-Prot
  ENSRNOG00060026552 UniProtKB/Swiss-Prot
  ENSRNOG00065012607 UniProtKB/Swiss-Prot
Ensembl Transcript ENSRNOT00000075420 ENTREZGENE
  ENSRNOT00000075420.3 UniProtKB/Swiss-Prot
  ENSRNOT00055039707 UniProtKB/Swiss-Prot
  ENSRNOT00060045986 UniProtKB/Swiss-Prot
  ENSRNOT00065020507 UniProtKB/Swiss-Prot
Gene3D-CATH 3.80.10.10 UniProtKB/Swiss-Prot
InterPro Leu-rich_rpt UniProtKB/Swiss-Prot
  Leu-rich_rpt_typical-subtyp UniProtKB/Swiss-Prot
  LRR_dom_sf UniProtKB/Swiss-Prot
KEGG Report rno:685472 UniProtKB/Swiss-Prot
NCBI Gene 685472 ENTREZGENE
PANTHER LEUCINE RICH REPEAT TRANSMEMBRANE NEURONAL 2 UniProtKB/Swiss-Prot
  SLIT RELATED LEUCINE-RICH REPEAT NEURONAL PROTEIN UniProtKB/Swiss-Prot
Pfam LRR_8 UniProtKB/Swiss-Prot
PhenoGen Lrrtm2 PhenoGen
PRINTS LEURICHRPT UniProtKB/Swiss-Prot
PROSITE LRR UniProtKB/Swiss-Prot
RatGTEx ENSRNOG00000047085 RatGTEx
  ENSRNOG00055023116 RatGTEx
  ENSRNOG00060026552 RatGTEx
  ENSRNOG00065012607 RatGTEx
SMART LRR_TYP UniProtKB/Swiss-Prot
Superfamily-SCOP L domain-like UniProtKB/Swiss-Prot
UniProt D4A7P2 ENTREZGENE, UniProtKB/Swiss-Prot


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2008-07-08 Lrrtm2  leucine rich repeat transmembrane neuronal 2  LOC682156  similar to leucine-rich repeat transmembrane neuronal 2 protein  Data merged from RGD:1586931 1643240 APPROVED
2008-03-05 Lrrtm2  leucine rich repeat transmembrane neuronal 2  LOC685472  similar to leucine-rich repeat transmembrane neuronal 2 protein  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2006-11-20 LOC685472  similar to leucine-rich repeat transmembrane neuronal 2 protein      Symbol and Name status set to provisional 70820 PROVISIONAL
2006-11-19 LOC682156  similar to leucine-rich repeat transmembrane neuronal 2 protein      Symbol and Name status set to provisional 70820 PROVISIONAL