Wasf3 (WASP family member 3) - Rat Genome Database

Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Advanced Search (OLGA)
Gene: Wasf3 (WASP family member 3) Rattus norvegicus
Analyze
Symbol: Wasf3
Name: WASP family member 3
RGD ID: 1592807
Description: Predicted to enable actin binding activity. Predicted to be involved in cytoskeleton organization; modification of postsynaptic actin cytoskeleton; and regulation of cell shape. Predicted to act upstream of or within lamellipodium assembly; oligodendrocyte development; and positive regulation of myelination. Predicted to be located in glial cell projection and lamellipodium. Predicted to be active in glutamatergic synapse and postsynapse. Orthologous to human WASF3 (WASP family member 3); INTERACTS WITH 17alpha-ethynylestradiol; 2,3,7,8-tetrachlorodibenzodioxine; 2,3,7,8-Tetrachlorodibenzofuran.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: actin-binding protein WASF3; LOC682937; similar to WAS protein family, member 3; WAS protein family, member 3; wiskott-Aldrich syndrome protein family member 3
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: mRatBN7.2 - mRatBN7.2 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81213,675,642 - 13,774,648 (-)NCBIGRCr8
mRatBN7.2128,563,805 - 8,660,799 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl128,562,062 - 8,660,751 (-)EnsemblmRatBN7.2 Ensembl
Rnor_6.01210,297,896 - 10,391,014 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1210,298,555 - 10,391,270 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01212,401,989 - 12,493,810 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Celera1210,379,274 - 10,474,931 (-)NCBICelera
Cytogenetic Map12p11NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
3. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:16190876   PMID:16723544   PMID:21834987   PMID:23533145  


Genomics

Comparative Map Data
Wasf3
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81213,675,642 - 13,774,648 (-)NCBIGRCr8
mRatBN7.2128,563,805 - 8,660,799 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl128,562,062 - 8,660,751 (-)EnsemblmRatBN7.2 Ensembl
Rnor_6.01210,297,896 - 10,391,014 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1210,298,555 - 10,391,270 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01212,401,989 - 12,493,810 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Celera1210,379,274 - 10,474,931 (-)NCBICelera
Cytogenetic Map12p11NCBI
WASF3
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381326,539,139 - 26,688,948 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1326,557,683 - 26,688,948 (+)EnsemblGRCh38hg38GRCh38
GRCh371327,131,820 - 27,263,085 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361326,029,840 - 26,161,082 (+)NCBINCBI36Build 36hg18NCBI36
Build 341326,029,886 - 26,161,063NCBI
Celera138,256,077 - 8,332,052 (+)NCBICelera
Cytogenetic Map13q12.13NCBI
HuRef137,955,351 - 8,086,464 (+)NCBIHuRef
CHM1_11327,099,816 - 27,231,081 (+)NCBICHM1_1
T2T-CHM13v2.01325,753,035 - 25,902,898 (+)NCBIT2T-CHM13v2.0
Wasf3
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm395146,317,411 - 146,410,425 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl5146,321,795 - 146,410,425 (+)EnsemblGRCm39 Ensembl
GRCm385146,385,006 - 146,473,615 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl5146,384,985 - 146,473,615 (+)EnsemblGRCm38mm10GRCm38
MGSCv375147,196,582 - 147,282,701 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv365146,689,240 - 146,774,650 (+)NCBIMGSCv36mm8
Celera5144,372,570 - 144,458,483 (+)NCBICelera
Cytogenetic Map5G3NCBI
cM Map585.23NCBI
Wasf3
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554976,102,909 - 6,190,770 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554976,100,633 - 6,190,639 (+)NCBIChiLan1.0ChiLan1.0
WASF3
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21426,156,139 - 26,287,412 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11317,264,980 - 17,396,221 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0137,849,687 - 7,980,979 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11326,250,171 - 26,328,553 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1326,250,171 - 26,328,553 (+)Ensemblpanpan1.1panPan2
WASF3
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12512,804,485 - 12,881,988 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2512,805,431 - 12,877,770 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2512,875,143 - 13,008,318 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.02512,944,371 - 13,077,673 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2512,944,371 - 13,077,678 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12512,830,485 - 12,963,635 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02512,822,254 - 12,955,911 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02512,873,760 - 13,006,959 (-)NCBIUU_Cfam_GSD_1.0
Wasf3
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024404945115,180,691 - 115,300,651 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_004936948345,899 - 465,930 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_004936948345,942 - 465,323 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
WASF3
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl114,261,177 - 4,366,253 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1114,261,121 - 4,366,258 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2113,736,220 - 3,791,727 (+)NCBISscrofa10.2Sscrofa10.2susScr3
WASF3
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.135,805,115 - 5,934,764 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl35,889,263 - 5,931,662 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366605738,489,195 - 38,621,738 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Wasf3
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462477611,864,652 - 11,904,295 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462477611,863,880 - 11,985,087 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Wasf3
820 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:55
Count of miRNA genes:53
Interacting mature miRNAs:54
Transcripts:ENSRNOT00000071567
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
2312418Kidm41Kidney mass QTL 413.70.0001kidney mass (VT:0002707)single kidney wet weight to body weight ratio (CMO:0000622)12119611090Rat
8552964Pigfal17Plasma insulin-like growth factor 1 level QTL 173.5blood insulin-like growth factor amount (VT:0010479)plasma insulin-like growth factor 1 level (CMO:0001299)12556449546669029Rat
7411641Foco19Food consumption QTL 1927.70.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)12556449546669029Rat
9590147Scort7Serum corticosterone level QTL 713.610.001blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)12142110980Rat
8552912Pigfal6Plasma insulin-like growth factor 1 level QTL 65blood insulin-like growth factor amount (VT:0010479)plasma insulin-like growth factor 1 level (CMO:0001299)12556449846669029Rat
10059594Kidm46Kidney mass QTL 463.790.025kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)12610757946669029Rat
61331Eau2Experimental allergic uveoretinitis QTL 20.0005uvea integrity trait (VT:0010551)experimental autoimmune uveitis score (CMO:0001504)12852542328064601Rat
1581516Cm56Cardiac mass QTL 564.20.05heart left ventricle mass (VT:0007031)heart left ventricle weight to body weight ratio (CMO:0000530)12129333307Rat
9590086Insglur6Insulin/glucose ratio QTL 618.970.001blood insulin amount (VT:0001560)calculated plasma insulin level (CMO:0002170)12142110980Rat
8552918Pigfal7Plasma insulin-like growth factor 1 level QTL 7blood insulin-like growth factor amount (VT:0010479)plasma insulin-like growth factor 1 level (CMO:0001299)12556449546669029Rat
6893681Bw109Body weight QTL 1092.30.004body mass (VT:0001259)body weight (CMO:0000012)12123297788Rat
1302792Scl21Serum cholesterol level QTL 213.80.0011blood cholesterol amount (VT:0000180)plasma total cholesterol level (CMO:0000585)12719673046669029Rat
1300174Bw15Body weight QTL 152.93body mass (VT:0001259)body weight loss (CMO:0001399)1219318387Rat
1598855Bp294Blood pressure QTL 2943.5arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)12134851688Rat
1600391Edcs2Endometrial carcinoma susceptibility QTL23.50.01uterus morphology trait (VT:0001120)percentage of study population developing endometrioid carcinoma during a period of time (CMO:0001759)12683319017870186Rat
10755457Coatc14Coat color QTL 140.01759coat/hair pigmentation trait (VT:0010463)pigmented ventral coat/hair area to total ventral coat/hair area ratio (CMO:0001812)12122591684Rat
724526Uae3Urinary albumin excretion QTL 34.90.0001urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)12390696910373166Rat
634351Apr5Acute phase response QTL 56.7blood interleukin-6 amount (VT:0008595)plasma interleukin-6 level (CMO:0001927)12144503507Rat
8694179Bw150Body weight QTL 1502.90.001body mass (VT:0001259)body weight gain (CMO:0000420)12142110980Rat
634350Apr4Acute phase response QTL 46orosomucoid 1 amount (VT:0010541)plasma orosomucoid 1 level (CMO:0001467)12117200546172005Rat
7411545Bw128Body weight QTL 1285.20.001body mass (VT:0001259)body weight gain (CMO:0000420)12142110980Rat
7411547Bw129Body weight QTL 1290.001body mass (VT:0001259)body weight gain (CMO:0000420)6556449546669029Rat
7387292Kidm42Kidney mass QTL 423.030.0004kidney mass (VT:0002707)left kidney wet weight (CMO:0000083)12136247923Rat
737979Pia22Pristane induced arthritis QTL 2253.1joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)12144465750Rat
7411586Foco5Food consumption QTL 55.40.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)12142110980Rat
2303575Insul14Insulin level QTL 144blood insulin amount (VT:0001560)blood insulin level (CMO:0000349)12142450532Rat
7411588Foco6Food consumption QTL 60.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)12556449546669029Rat
2302042Pia38Pristane induced arthritis QTL 383.50.001blood immunoglobulin amount (VT:0002460)serum immunoglobulin G1 level (CMO:0002115)12144503507Rat
7411595Foco9Food consumption QTL 940.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)12142110980Rat
7411597Foco10Food consumption QTL 100.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)12556449546669029Rat
2293086Iddm30Insulin dependent diabetes mellitus QTL 303.82blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)12844949028302290Rat
7411660Foco28Food consumption QTL 2810.90.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)12142110980Rat

Markers in Region
BF404808  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2128,569,363 - 8,569,490 (+)MAPPERmRatBN7.2
Rnor_6.01210,303,271 - 10,303,397NCBIRnor6.0
Rnor_5.01212,407,364 - 12,407,490UniSTSRnor5.0
Celera1210,384,660 - 10,384,786UniSTS
RH 3.4 Map12110.7UniSTS
BE119348  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2128,571,663 - 8,571,829 (+)MAPPERmRatBN7.2
Rnor_6.01210,305,570 - 10,305,735NCBIRnor6.0
Rnor_5.01212,409,663 - 12,409,828UniSTSRnor5.0
Celera1210,386,960 - 10,387,125UniSTS
RH 3.4 Map12108.6UniSTS


Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
nervous system
renal system
reproductive system
respiratory system
9 9 48 113 85 84 59 19 59 6 209 89 93 45 60 25

Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001427154 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_001061259 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006221252 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008758886 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017598587 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017604428 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017604429 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017604430 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039089936 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039089938 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063271652 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063271653 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063271654 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063271655 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_010056416 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_010056417 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_010056418 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide CH474012 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAXUCZ010000012 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSRNOT00000071567   ⟹   ENSRNOP00000065380
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl128,562,062 - 8,660,751 (-)Ensembl
Rnor_6.0 Ensembl1210,299,112 - 10,335,499 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000092340   ⟹   ENSRNOP00000075868
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.0 Ensembl1210,315,476 - 10,391,270 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000092627   ⟹   ENSRNOP00000075856
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.0 Ensembl1210,298,555 - 10,307,265 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000119900   ⟹   ENSRNOP00000081893
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl128,562,062 - 8,660,751 (-)Ensembl
RefSeq Acc Id: NM_001427154   ⟹   NP_001414083
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81213,675,645 - 13,774,559 (-)NCBI
RefSeq Acc Id: XM_039089936   ⟹   XP_038945864
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81213,675,642 - 13,774,594 (-)NCBI
mRatBN7.2128,563,805 - 8,660,773 (-)NCBI
RefSeq Acc Id: XM_039089938   ⟹   XP_038945866
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81213,675,642 - 13,687,146 (-)NCBI
mRatBN7.2128,563,805 - 8,573,321 (-)NCBI
RefSeq Acc Id: XM_063271652   ⟹   XP_063127722
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81213,675,642 - 13,755,819 (-)NCBI
RefSeq Acc Id: XM_063271653   ⟹   XP_063127723
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81213,675,642 - 13,774,648 (-)NCBI
RefSeq Acc Id: XM_063271654   ⟹   XP_063127724
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81213,675,642 - 13,752,177 (-)NCBI
RefSeq Acc Id: XM_063271655   ⟹   XP_063127725
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81213,675,642 - 13,774,593 (-)NCBI
RefSeq Acc Id: XR_010056416
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81213,675,642 - 13,774,648 (-)NCBI
RefSeq Acc Id: XR_010056417
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81213,675,642 - 13,774,594 (-)NCBI
RefSeq Acc Id: XR_010056418
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81213,675,642 - 13,774,648 (-)NCBI
Ensembl Acc Id: ENSRNOP00000075868   ⟸   ENSRNOT00000092340
Ensembl Acc Id: ENSRNOP00000075856   ⟸   ENSRNOT00000092627
Ensembl Acc Id: ENSRNOP00000065380   ⟸   ENSRNOT00000071567
RefSeq Acc Id: XP_038945864   ⟸   XM_039089936
- Peptide Label: isoform X1
- UniProtKB: M0R7F3 (UniProtKB/TrEMBL),   A6K1D0 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038945866   ⟸   XM_039089938
- Peptide Label: isoform X3
Ensembl Acc Id: ENSRNOP00000081893   ⟸   ENSRNOT00000119900
RefSeq Acc Id: XP_063127723   ⟸   XM_063271653
- Peptide Label: isoform X2
- UniProtKB: A0A8I6G8L2 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063127725   ⟸   XM_063271655
- Peptide Label: isoform X2
- UniProtKB: A0A8I6G8L2 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063127722   ⟸   XM_063271652
- Peptide Label: isoform X1
- UniProtKB: A6K1D0 (UniProtKB/TrEMBL),   M0R7F3 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063127724   ⟸   XM_063271654
- Peptide Label: isoform X2
- UniProtKB: A0A8I6G8L2 (UniProtKB/TrEMBL)
RefSeq Acc Id: NP_001414083   ⟸   NM_001427154
- UniProtKB: A6K1D0 (UniProtKB/TrEMBL),   M0R7F3 (UniProtKB/TrEMBL)
Protein Domains
WH2

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-M0R7F3-F1-model_v2 AlphaFold M0R7F3 1-502 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen


Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1592807 AgrOrtholog
BioCyc Gene G2FUF-20083 BioCyc
Ensembl Genes ENSRNOG00000048898 Ensembl, UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000071567.3 UniProtKB/TrEMBL
  ENSRNOT00000119900.1 UniProtKB/TrEMBL
Gene3D-CATH 1.20.5.340 UniProtKB/TrEMBL
  6.10.280.150 UniProtKB/TrEMBL
InterPro SCAR/WAVE_fam UniProtKB/TrEMBL
  WH2_dom UniProtKB/TrEMBL
NCBI Gene 682937 ENTREZGENE
PANTHER PTHR12902 UniProtKB/TrEMBL
  WISKOTT-ALDRICH SYNDROME PROTEIN FAMILY MEMBER UniProtKB/TrEMBL
Pfam WH2 UniProtKB/TrEMBL
PhenoGen Wasf3 PhenoGen
PROSITE WH2 UniProtKB/TrEMBL
RatGTEx ENSRNOG00000048898 RatGTEx
SMART WH2 UniProtKB/TrEMBL
UniProt A0A8I6G8L2 ENTREZGENE, UniProtKB/TrEMBL
  A6K1D0 ENTREZGENE, UniProtKB/TrEMBL
  M0R7F3 ENTREZGENE, UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2019-04-02 Wasf3  WASP family member 3  Wasf3  WAS protein family, member 3  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2013-08-13 Wasf3  WAS protein family, member 3  LOC682937  similar to WAS protein family, member 3  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2006-11-20 LOC682937  similar to WAS protein family, member 3      Symbol and Name status set to provisional 70820 PROVISIONAL