Sepsecs (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCr8 | 14 | 62,524,287 - 62,554,529 (+) | NCBI | | GRCr8 | | | mRatBN7.2 | 14 | 58,311,484 - 58,341,745 (+) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 14 | 58,311,499 - 58,341,740 (+) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | 14 | 62,717,316 - 62,747,525 (+) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 14 | 64,030,850 - 64,061,038 (+) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 14 | 60,427,595 - 60,457,783 (+) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 14 | 60,657,730 - 60,687,950 (+) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 14 | 60,657,686 - 60,687,958 (+) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 14 | 60,774,968 - 60,804,615 (+) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | Celera | 14 | 57,410,554 - 57,440,746 (+) | NCBI | | Celera | | | Cytogenetic Map | 14 | q11 | NCBI | | | | |
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SEPSECS (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCh38 | 4 | 25,120,014 - 25,160,582 (-) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 4 | 25,120,014 - 25,160,550 (-) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 4 | 25,121,636 - 25,162,071 (-) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 4 | 24,732,820 - 24,771,083 (-) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Celera | 4 | 25,570,424 - 25,611,003 (-) | NCBI | | Celera | | | Cytogenetic Map | 4 | p15.2 | NCBI | | | | | HuRef | 4 | 24,462,251 - 24,502,807 (-) | NCBI | | HuRef | | | CHM1_1 | 4 | 25,120,960 - 25,161,508 (-) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 4 | 25,101,930 - 25,142,501 (-) | NCBI | | T2T-CHM13v2.0 | | |
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Sepsecs (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCm39 | 5 | 52,797,431 - 52,827,104 (-) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 5 | 52,797,429 - 52,827,050 (-) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 5 | 52,640,089 - 52,669,764 (-) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 5 | 52,640,087 - 52,669,708 (-) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 5 | 53,034,646 - 53,060,940 (-) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 5 | 52,931,655 - 52,957,949 (-) | NCBI | | MGSCv36 | mm8 | | Celera | 5 | 50,018,495 - 50,044,811 (-) | NCBI | | Celera | | | Cytogenetic Map | 5 | C1 | NCBI | | | | | cM Map | 5 | 28.44 | NCBI | | | | |
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Sepsecs (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
ChiLan1.0 Ensembl | NW_004955443 | 19,822,811 - 19,863,495 (+) | Ensembl | ChiLan1.0 | | | | ChiLan1.0 | NW_004955443 | 19,759,772 - 19,859,188 (+) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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SEPSECS (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
NHGRI_mPanPan1-v2 | 3 | 25,366,640 - 25,407,835 (-) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 4 | 25,557,647 - 25,601,542 (-) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 4 | 19,517,552 - 19,558,454 (-) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 4 | 24,802,260 - 24,842,816 (-) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 4 | 24,802,260 - 24,842,816 (-) | Ensembl | panpan1.1 | | panPan2 | |
|
SEPSECS (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
CanFam3.1 | 3 | 85,071,011 - 85,106,272 (+) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 3 | 85,069,742 - 85,102,347 (+) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 3 | 87,581,301 - 87,617,670 (+) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 3 | 86,042,457 - 86,079,026 (+) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 3 | 86,042,315 - 86,079,014 (+) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 3 | 85,175,693 - 85,212,054 (+) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 3 | 85,280,327 - 85,316,666 (+) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 3 | 85,666,236 - 85,702,832 (+) | NCBI | | UU_Cfam_GSD_1.0 | | |
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Sepsecs (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
HiC_Itri_2 | NW_024405285 | 50,634,482 - 50,667,254 (+) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936477 | 4,336,059 - 4,368,901 (+) | Ensembl | SpeTri2.0 | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936477 | 4,335,945 - 4,368,117 (+) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
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SEPSECS (Sus scrofa - pig) |
Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
Sscrofa11.1 Ensembl | 8 | 19,097,456 - 19,136,222 (-) | Ensembl | Sscrofa11.1 | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 8 | 19,097,788 - 19,162,246 (-) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 8 | 19,354,106 - 19,412,899 (-) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
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SEPSECS (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
ChlSab1.1 | 27 | 25,202,150 - 25,242,782 (+) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 27 | 25,202,506 - 25,243,330 (+) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666047 | 71,720,135 - 71,758,892 (+) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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Sepsecs (Heterocephalus glaber - naked mole-rat) |
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