Pes1-ps1 (pescadillo ribosomal biogenesis factor 1, pseudogene 1) - Rat Genome Database

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Gene: Pes1-ps1 (pescadillo ribosomal biogenesis factor 1, pseudogene 1) Rattus norvegicus
Analyze
Symbol: Pes1-ps1
Name: pescadillo ribosomal biogenesis factor 1, pseudogene 1
RGD ID: 1586138
Description:
Type: pseudo
RefSeq Status: MODEL
Previously known as: LOC363734; similar to pescadillo homolog 1, containing BRCT domain
Latest Assembly: mRatBN7.2 - mRatBN7.2 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.21121,530,647 - 21,532,896 (-)NCBImRatBN7.2mRatBN7.2
Rnor_6.01121,727,558 - 21,729,545 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01125,367,303 - 25,369,141 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41121,902,141 - 21,903,871 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera1121,421,123 - 21,423,110 (-)NCBICelera
Cytogenetic Map11q11NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics

Variants

.
Variants in Pes1-ps1
34 total Variants

QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
634341Bw121Body weight QTL 1213.56abdominal fat pad mass (VT:1000711)abdominal fat pad weight (CMO:0000088)11121836709Rat
1598842Glom10Glomerulus QTL 103.4kidney glomerulus morphology trait (VT:0005325)index of glomerular damage (CMO:0001135)11135331169Rat
1300147Bp187Blood pressure QTL 1873.67arterial blood pressure trait (VT:2000000)blood pressure time series experimental set point of the baroreceptor response (CMO:0002593)11169446234Rat
1558659Tescar1Testicular tumor resistance QTL 13.9testis integrity trait (VT:0010572)percentage of study population developing testis tumors during a period of time (CMO:0001261)11104193166113562Rat
1641927Alcrsp10Alcohol response QTL 10alcohol metabolism trait (VT:0015089)blood ethanol level (CMO:0000535)11843667453436674Rat
2290451Scl58Serum cholesterol level QTL 583.48blood cholesterol amount (VT:0000180)plasma total cholesterol level (CMO:0000585)111283104625121472Rat
724517Uae18Urinary albumin excretion QTL 183.7urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)111647204744285911Rat
1600394Edcs1Endometrial carcinoma susceptibility QTL12.90.04uterus morphology trait (VT:0001120)percentage of study population developing endometrioid carcinoma during a period of time (CMO:0001759)111897620824697116Rat
724554Iddm17Insulin dependent diabetes mellitus QTL 170.001blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)111897620886241447Rat


Expression


Sequence


Reference Sequences
RefSeq Acc Id: XR_146212
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_5.01125,367,411 - 25,369,141 (-)NCBI
RefSeq Acc Id: XR_146533
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
Celera1121,421,290 - 21,423,020 (-)NCBI

Additional Information

Database Acc Id Source(s)
BioCyc Gene G2FUF-22107 BioCyc
NCBI Gene 363734 ENTREZGENE
PhenoGen Pes1-ps1 PhenoGen


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2022-06-10 Pes1-ps1  pescadillo ribosomal biogenesis factor 1, pseudogene 1  LOC363734  similar to pescadillo homolog 1, containing BRCT domain  Symbol and Name Changed 1299863 APPROVED
2006-11-19 LOC363734  similar to pescadillo homolog 1, containing BRCT domain      Symbol and Name status set to provisional 70820 PROVISIONAL