Niban3 (niban apoptosis regulator 3)

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Gene: Niban3 (niban apoptosis regulator 3) Rattus norvegicus

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Symbol:

Niban3

Name:

niban apoptosis regulator 3

RGD ID:

1566103

Description:

Orthologous to human NIBAN3 (niban apoptosis regulator 3); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; bisphenol A; Cuprizon.

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

B-cell novel protein 1; Fam129c; family with sequence similarity 129, member C; LOC498604; niban-like protein 2; similar to B-cell novel protein 1

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	NIBAN3 (niban apoptosis regulator 3)	HGNC	EggNOG, Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, OrthoMCL, Panther, PhylomeDB
Mus musculus (house mouse):	Niban3 (niban apoptosis regulator 3)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Niban3 (niban apoptosis regulator 3)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	NIBAN3 (niban apoptosis regulator 3)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	NIBAN3 (niban apoptosis regulator 3)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Niban3 (niban apoptosis regulator 3)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	NIBAN3 (niban apoptosis regulator 3)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	NIBAN3 (niban apoptosis regulator 3)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Niban3 (niban apoptosis regulator 3)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Alliance orthologs ³
Homo sapiens (human):	NIBAN3 (niban apoptosis regulator 3)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Mus musculus (house mouse):	Niban3 (niban apoptosis regulator 3)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)

Latest Assembly:

mRatBN7.2 - mRatBN7.2 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	16	18,341,108 - 18,352,571 (+)	NCBI		GRCr8
mRatBN7.2	16	18,307,122 - 18,318,589 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	16	18,307,221 - 18,318,585 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	16	18,358,119 - 18,369,490 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	16	19,490,264 - 19,501,658 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	16	18,411,057 - 18,422,430 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	16	20,027,100 - 20,038,720 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	16	20,027,348 - 20,038,716 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	16	19,887,694 - 19,899,608 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	16	18,798,145 - 18,809,570 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
Celera	16	18,511,127 - 18,522,499 (+)	NCBI		Celera
Cytogenetic Map	16	p14	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

2,2',4,4',5,5'-hexachlorobiphenyl (ISO)

2,2',5,5'-tetrachlorobiphenyl (ISO)

2,3,7,8-tetrachlorodibenzodioxine (EXP)

4,4'-sulfonyldiphenol (ISO)

aristolochic acid A (ISO)

benzo[a]pyrene (ISO)

bis(2-ethylhexyl) phthalate (ISO)

bisphenol A (EXP,ISO)

buta-1,3-diene (ISO)

Cuprizon (EXP)

deoxynivalenol (ISO)

dimethylarsinic acid (ISO)

dioxygen (ISO)

fulvestrant (ISO)

Licochalcone B (ISO)

methylarsonic acid (ISO)

nickel atom (ISO)

paracetamol (EXP)

PCB138 (ISO)

perfluorohexanesulfonic acid (ISO)

sodium arsenate (ISO)

sodium arsenite (ISO)

titanium dioxide (ISO)

trichloroethene (EXP)

triptonide (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Molecular Function

protein binding (ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

Additional References at PubMed

PMID:8889548	PMID:12477932

Genomics

Comparative Map Data

Niban3
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	16	18,341,108 - 18,352,571 (+)	NCBI		GRCr8
mRatBN7.2	16	18,307,122 - 18,318,589 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	16	18,307,221 - 18,318,585 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	16	18,358,119 - 18,369,490 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	16	19,490,264 - 19,501,658 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	16	18,411,057 - 18,422,430 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	16	20,027,100 - 20,038,720 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	16	20,027,348 - 20,038,716 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	16	19,887,694 - 19,899,608 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	16	18,798,145 - 18,809,570 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
Celera	16	18,511,127 - 18,522,499 (+)	NCBI		Celera
Cytogenetic Map	16	p14	NCBI

NIBAN3
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	19	17,523,301 - 17,555,537 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	19	17,523,301 - 17,553,839 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	19	17,634,110 - 17,664,652 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	19	17,495,110 - 17,525,648 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Celera	19	17,535,726 - 17,566,244 (+)	NCBI		Celera
Cytogenetic Map	19	p13.11	NCBI
HuRef	19	17,199,190 - 17,229,612 (+)	NCBI		HuRef
CHM1_1	19	17,633,492 - 17,663,983 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	19	17,657,937 - 17,690,155 (+)	NCBI		T2T-CHM13v2.0

Niban3
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	8	72,049,000 - 72,061,599 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	8	72,050,292 - 72,060,580 (+)	Ensembl		GRCm39 Ensembl
GRCm38	8	71,596,356 - 71,608,146 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	8	71,597,648 - 71,607,936 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	8	74,121,545 - 74,132,048 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	8	74,121,545 - 74,132,048 (+)	NCBI		MGSCv36	mm8
Celera	8	74,111,955 - 74,122,457 (+)	NCBI		Celera
Cytogenetic Map	8	B3.3	NCBI
cM Map	8	34.43	NCBI

Niban3
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955524	784,974 - 795,068 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955524	786,504 - 795,307 (-)	NCBI	ChiLan1.0	ChiLan1.0

NIBAN3
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	20	22,391,840 - 22,424,145 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	19	21,400,001 - 21,430,665 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	19	17,013,689 - 17,040,984 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	19	17,983,448 - 18,011,710 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	19	17,983,448 - 18,011,699 (+)	Ensembl	panpan1.1		panPan2

NIBAN3
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	20	45,274,346 - 45,290,852 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	20	45,077,609 - 45,290,775 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	20	45,188,325 - 45,204,537 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	20	45,761,302 - 45,777,530 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	20	45,760,148 - 45,777,499 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	20	44,997,849 - 45,014,033 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	20	45,407,903 - 45,424,112 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	20	45,683,934 - 45,700,156 (-)	NCBI		UU_Cfam_GSD_1.0

Niban3
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405118	203,847,538 - 203,862,825 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936596	3,400,835 - 3,409,285 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936596	3,399,045 - 3,411,431 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

NIBAN3
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	2	60,163,483 - 60,185,777 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	2	60,164,259 - 60,185,772 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	2	59,728,234 - 59,750,902 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

NIBAN3
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	6	16,014,646 - 16,039,086 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
Vero_WHO_p1.0	NW_023666074	3,385,070 - 3,410,823 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Niban3
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624908	512,715 - 520,516 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624908	511,115 - 522,509 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in Niban3
168 total Variants

miRNA Target Status

Predicted Target Of

	Summary Value
Count of predictions:	77
Count of miRNA genes:	59
Interacting mature miRNAs:	70
Transcripts:	ENSRNOT00000034589
Prediction methods:	Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (mRatBN7.2)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
631561	Hcuc2	Hepatic copper content QTL 2	2.8		liver copper amount (VT:0003065)	liver total copper weight (CMO:0001507)	16	1	39533949	Rat
1582235	Insul8	Insulin level QTL 8	3.3	0.0063	blood insulin amount (VT:0001560)	calculated serum insulin level (CMO:0000359)	16	1	26727669	Rat
2307172	Activ4	Activity QTL 4	3.71	0.00023	locomotor behavior trait (VT:0001392)	number of entries into a discrete space in an experimental apparatus (CMO:0000960)	16	1	33418960	Rat
1354584	Despr6	Despair related QTL 6	3.1	0.0067	locomotor behavior trait (VT:0001392)	amount of time spent in voluntary immobility (CMO:0001043)	16	1	39533930	Rat
2302380	Slep6	Serum leptin concentration QTL 6	3.36		blood leptin amount (VT:0005667)	serum leptin level (CMO:0000780)	16	1	32139025	Rat
737819	Hcas4	Hepatocarcinoma susceptibility QTL 4	4.43		liver integrity trait (VT:0010547)	volume of individual liver tumorous lesion (CMO:0001078)	16	4227609	46975965	Rat
631517	Scl9	Serum cholesterol level QTL 9	3.3		blood cholesterol amount (VT:0000180)	serum total cholesterol level (CMO:0000363)	16	15726433	21034895	Rat
1354625	Despr7	Despair related QTL 7	3.16	0.016	locomotor behavior trait (VT:0001392)	amount of time spent in voluntary immobility (CMO:0001043)	16	1	44977551	Rat
9590151	Scort8	Serum corticosterone level QTL 8	8.45	0.001	blood corticosterone amount (VT:0005345)	plasma corticosterone level (CMO:0001173)	16	1	30836262	Rat
61338	Bp23	Blood pressure QTL 23	4.3		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	16	4227609	49227609	Rat
61405	Niddm6	Non-insulin dependent diabetes mellitus QTL 6	3.66	0.001	blood glucose amount (VT:0000188)	plasma glucose level (CMO:0000042)	16	4227609	48972724	Rat
631830	Alc7	Alcohol consumption QTL 7	2.9		consumption behavior trait (VT:0002069)	ethanol drink intake rate (CMO:0001407)	16	1	26727669	Rat
7411664	Foco30	Food consumption QTL 30	11	0.001	eating behavior trait (VT:0001431)	feed conversion ratio (CMO:0001312)	16	1	44588133	Rat
1600378	Arunc4	Aerobic running capacity QTL 4		0.03	exercise endurance trait (VT:0002332)	maximum distance run on treadmill (CMO:0001406)	16	380245	80345693	Rat
70183	BpQTLcluster13	Blood pressure QTL cluster 13	3.654		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	16	4227609	43025077	Rat
737826	Alc11	Alcohol consumption QTL 11	3.2		consumption behavior trait (VT:0002069)	ethanol drink intake rate (CMO:0001407)	16	4227609	60252231	Rat
1600369	Hcas8	Hepatocarcinoma susceptibility QTL 8			liver integrity trait (VT:0010547)	liver tumorous lesion number (CMO:0001068)	16	1	22477621	Rat
2303566	Bw90	Body weight QTL 90	2		body mass (VT:0001259)	body weight (CMO:0000012)	16	1	39533930	Rat
2312663	Slep9	Serum leptin concentration QTL 9		0.001	blood leptin amount (VT:0005667)	serum leptin level (CMO:0000780)	16	832236	59492508	Rat
2306902	Bp339	Blood pressure QTL 339		0.01	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	16	3380150	43025077	Rat
1300133	Rf24	Renal function QTL 24	3.64		blood creatinine amount (VT:0005328)	creatinine clearance (CMO:0000765)	16	3380150	21361552	Rat
2312660	Bw95	Body weight QTL 95		0.05	inguinal fat pad mass (VT:0010424)	inguinal fat pad weight to body weight ratio (CMO:0001253)	16	832236	59492508	Rat
2312666	Insul16	Insulin level QTL 16		0.01	blood insulin amount (VT:0001560)	serum insulin level (CMO:0000358)	16	832236	59492508	Rat
634355	Rends4	Renal damage susceptibility QTL 4		0.05	kidney blood vessel morphology trait (VT:0000530)	organ lesion measurement (CMO:0000677)	16	1	26727669	Rat
70205	Gcr3	Gastric cancer resistance QTL 3	2.3		stomach morphology trait (VT:0000470)	stomach tumor diameter (CMO:0001889)	16	17696791	82635055	Rat
2293343	Glom16	Glomerulus QTL 16	7.4		kidney glomerulus integrity trait (VT:0010546)	kidney sclerotic glomeruli count to total glomeruli count ratio (CMO:0001269)	16	832236	46053497	Rat
2312669	Stl23	Serum triglyceride level QTL 23		0.01	blood triglyceride amount (VT:0002644)	serum triglyceride level (CMO:0000360)	16	832236	59492508	Rat
6903319	Bw114	Body weight QTL 114	2.7	0.0037	body mass (VT:0001259)	body weight (CMO:0000012)	16	1	43534949	Rat

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	nervous system	renal system	reproductive system	respiratory system
9	6	25	105	91	90	59	25	59	6	185	71	85	41	54	31

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001100908	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017600214	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017600215	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017600216	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039094758	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039094760	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039094761	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039094762	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AC122603	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC111077	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BQ211431	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH474031	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ230626	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ231627	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ232480	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ233400	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000016	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000034589 ⟹ ENSRNOP00000030537

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	16	18,307,221 - 18,318,585 (+)	Ensembl
Rnor_6.0 Ensembl	16	20,027,348 - 20,038,716 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000107728 ⟹ ENSRNOP00000086449

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	16	18,308,977 - 18,318,585 (+)	Ensembl

RefSeq Acc Id:

NM_001100908 ⟹ NP_001094378

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	16	18,341,203 - 18,352,571 (+)	NCBI
mRatBN7.2	16	18,307,221 - 18,318,589 (+)	NCBI
Rnor_6.0	16	20,027,348 - 20,038,720 (+)	NCBI
Rnor_5.0	16	19,887,694 - 19,899,608 (+)	NCBI
RGSC_v3.4	16	18,798,145 - 18,809,570 (+)	RGD
Celera	16	18,511,127 - 18,522,499 (+)	RGD

Sequence:

show sequence

GAATGGGAGCACAGCCTTCCTGCCCCCTGAGCAAGAAACAGCAGCAGCAGCTTCGGGGTCAGGT
GGATGGCCTGCTGAGGACCTTCCTGCCCTGCTACCGCAGGCAGCTGGCCACAGCTGTACTCAGG
CACATCTCCCAGGAGCTGGGGCCTCAGGAGCCAGCCGCATGCCAGCTGTCTCACACCAAAAAGC
TGCCTCGAGTCAGGGAGCACCAAGGACCCTTGACCCTGCTGCAGGGCCAGCCGCCACAATGGCG
GCCCATCTTCTGTGTTCTGCGTGGAGATGGACATCTAGAATGGTTCAGTCACAAGGAGAACTAT
GAGTCTGGGGGCTGTCCGCTAGGCTCCGCAGCTCTAACCGGGTATACACTGCTCACATCCCAGC
GTGAATACCTCTGCCTTTTGGATGACCTCTGCCCCAGCTCCTCTGGAGACCTTGCCCAGGAGGA
GCCGCTGCGGGTGTTGGAGGAGCCAGTGAGCTTCGCGCTCTTCCTCGTGCACCCCTTCCGGGCT
CACCTCTGCTTCTGCGCTGGCTCTAGAGGGGCGCAGCGCGCCTGGAGACTAGGCCTGCAGGGTG
CCATTCGGTTGAGAGCCACCGTCCTGCAGCGCAGCCGGGCGCCCGCAGCCTGCGCCTTCCTGGA
CGCCGTGCAGCTCTATCGACGACGCCGGGGCTACGCTGGTGGAGATGACGCGGCACTGGGCTCC
GACGCGGAGGTGCTGAGCGCCGAGTTGATGCGAGAGCTATTGCCCGCGCTGCGAGCACAGACGC
TCCGAGGCCTGCGCGGTGTGGGACGCGCCAGAGCCCGGGCCTGCGCAGAGTTCCTCGACGCCGT
GCACGCGGCCGTCCTGTCCTGGGCATCCTCGAGGCTGCGTGCCTTCCAGCCAGAAAAGGACGCA
CTGCTGGCGGCGCTGGAGAGGATGGTGCGCGCAGACCTTGAGCAGATCCTGCAGCAGCGTGCAC
TCGGGGCCCGCAGAATAGAAGCCGAGATCCAGGACACACTAGAGACATGCCTGTGCCAGAAGGT
GGACCCGCAACTGCCCCAGCTGACCCTGGTGCTGGTGAGCCTCGTGGAAGCCACGCTCCAAGCT
GTTCGGACCCTTCTCATCCGGGGGATGGACCGTCTGTGTCACTACCTTCGCAAGAACCCTTCTG
GCACTCAGCTGCGCAGGGAGGTTTATGAATTTGGGGAGATACCCTGGGACCCAGAGCTGATGCA
GGTCTGCTACCGGGAGGCAGAGAGGAACCACAATCATCTGACCCAGCTGGCAAAACCCTTTGGC
TTCCTGGGGATGCGGAGCCTGGTGTTTGGGGCTCAAGACTTTGCACAACAGCTCATGGCGGCTG
CAGTTACCACCTTTCTACAGCTGGCCGACCAGTGTCTGACGTCGGCTCTGGATTGCAGCCAGGC
AGCTGAGCAGCTGGAGAAAGTCAGGGGCCTTGTGCTGAAGAAGTTCACCTCAGACAGTGAGACC
ACTCGGTGGAGGTTCACCCGGGACTGGCTGTTGGGGATCTTCTGGCCCTTTGTATGGGGCCATC
TTGGGATGAGATGTAACTTGGAAACGCCTGAGGCAGATGGGGACATCCTGGCCGTGGGCTGCCA
GGTTCTGACCACCGAGGGTGTCTACAGGGATGTCATCCAGGGCCTCTTGCTGCAGAGGATTGAC
AGAGAATTGGAAAAGGTTCTTGGTGCCGGTGACAGAGCCCGTGCCCCAGCTGACTGCTCAGTAG
CCCAGTGGGACCAGGAAGGAGCAGATGAGGAAGCTGAGGCTCAGATCTGAGAGAGACTCTGCAG
GCCAAATGCAGCCACTCTGTACAACATGGCTTCCAAGAACATTCCAGAGCTGAGTTTTAATCCA
TCAACACCCATCCTGGTGGACAATGGATGAAGACCAGGAGTGGCTTCTCTGGGCCAAGCACATG
CATGCTTCTCTTCTGGCAGTCATGTATCCAACAACGAATCATTGATGGAATATTCCTGCTAAAA
TTTGTACACTCGACTTCTGAGCTAGCCTGGGCTACTGTAATAAGACACTGTCTCTAAATAACAA
CCCCAAACCCCTGTTAATATGATACATGTATCTCTTTAATGTCATTTTAATTCTTATTTAATTT
TTTCTTAAAAATCTGTTTCTTAAAGTTTCTTTTTTAACTTTGTTTACTTTGTATGTGTGTGTAC
ACACACATGCTTGGGCCTGTGGAGGTCAGAGGACAGTTTACAGGAGTTGGATTTTCTCTTTCCA
TCTAGTGGGTCTTGAGGCTCAAACTCAGGTCATCAAGCTTGGCGGCAAGCACCTTTACCCGCTA
AGTCATCTCGCTGGCCCCTGTTTTTACATTTATCAATCGCTTGATTAAAAACTGCTTGAATGAC
TAAATTGAACTTTAAAAAAAAAAAAAAAAAA

hide sequence

RefSeq Acc Id:

XM_017600214 ⟹ XP_017455703

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	16	18,341,108 - 18,352,571 (+)	NCBI
mRatBN7.2	16	18,307,122 - 18,318,589 (+)	NCBI
Rnor_6.0	16	20,027,100 - 20,037,615 (+)	NCBI

Sequence:

show sequence

TGCCCATCTGTACCAGGGGGTTGTTTTTTCCCACACTCCCTGGTCTCCCCTGGGGCTGTCCCCA
TTACCCCAATCAGAAACCACCAGTCTTGGTCCAGCCTGTCCCTAGAGGCCAGCAGGAGGCAGGT
GCAAACAGGAGGGGTGGAGGGTGGTACCAGATGGCCACACATACCCTCCTGGCACTTGGGCCAC
TGAGCTGACACCCAGCATCCTGAGCAGAGGGACTAGGACGGCTCTGAATGGTGGCAGAATGGGA
GCACAGCCTTCCTGCCCCCTGAGCAAGAAACAGCAGCAGCAGCTTCGGGGTCAGGTGGATGGCC
TGCTGAGGACCTTCCTGCCCTGCTACCGCAGGCAGCTGGCCACAGCTGTACTCAGGCACATCTC
CCAGGAGCTGGGGCCTCAGGAGCCAGCCGCATGCCAGCTGTCTCACACCAAAAAGCTGCCTCGA
GTCAGGGAGCACCAAGGACCCTTGACCCTGCTGCAGGGCCAGCCGCCACAATGGCGGCCCATCT
TCTGTGTTCTGCGTGGAGATGGACATCTAGAATGGTTCAGTCACAAGGAGAACTATGAGTCTGG
GGGCTGTCCGCTAGGCTCCGCAGCTCTAACCGGGTATACACTGCTCACATCCCAGCGTGAATAC
CTCTGCCTTTTGGATGACCTCTGCCCCAGCTCCTCTGGAGACCTTGCCCAGGAGGAGCCGCTGC
GGGTGTTGGAGGAGCCAGTGAGCTTCGCGCTCTTCCTCGTGCACCCCTTCCGGGCTCACCTCTG
CTTCTGCGCTGGCTCTAGAGGGGCGCAGCGCGCCTGGAGACTAGGCCTGCAGGGTGCCATTCGG
TTGAGAGCCACCGTCCTGCAGCGCAGCCGGGCGCCCGCAGCCTGCGCCTTCCTGGACGCCGTGC
AGCTCTATCGACGACGCCGGGGCTACGCTGGTGGAGATGACGCGGCACTGGGCTCCGACGCGGA
GGTGCTGAGCGCCGAGTTGATGCGAGAGCTATTGCCCGCGCTGCGAGCACAGACGCTCCGAGGC
CTGCGCGGTGTGGGACGCGCCAGAGCCCGGGCCTGCGCAGAGTTCCTCGACGCCGTGCACGCGG
CCGTCCTGTCCTGGGCATCCTCGAGGCTGCGTGCCTTCCAGCCAGAAAAGGACGCACTGCTGGC
GGCGCTGGAGAGGATGGTGCGCGCAGACCTTGAGCAGATCCTGCAGCAGCGTGCACTCGGGGCC
CGCAGAATAGAAGCCGAGATCCAGGACACACTAGAGACATGCCTGTGCCAGAAGGTGGACCCGC
AACTGCCCCAGCTGACCCTGGTGCTGGTGAGCCTCGTGGAAGCCACGCTCCAAGCTGTTCGGAC
CCTTCTCATCCGGGGGATGGACCGTCTGTGTCACTACCTTCGCAAGAACCCTTCTGGCACTCAG
CTGCGCAGGGAGGTTTATGAATTTGGGGAGATACCCTGGGACCCAGAGCTGATGCAGGTCTGCT
ACCGGGAGGCAGAGAGGAACCACAATCATCTGACCCAGCTGGCAAAACCCTTTGGCTTCCTGGG
GATGCGGAGCCTGGTGTTTGGGGCTCAAGACTTTGCACAACAGCTCATGGCGGCTGCAGTTACC
ACCTTTCTACAGCTGGCCGACCAGTGTCTGACGTCGGCTCTGGATTGCAGCCAGGCAGCTGAGC
AGCTGGAGAAAGTCAGGGGCCTTGTGCTGAAGAAGTTCACCTCAGACAGTGAGACCACTCGGTG
GAGGTTCACCCGGGACTGGCTGTTGGGGATCTTCTGGCCCTTTGTATGGGGCCATCTTGGGATG
AGATGTAACTTGGAAACGCCTGAGGCAGATGGGGACATCCTGGCCGTGGGCTGCCAGGTTCTGA
CCACCGAGGGTGTCTACAGGGATGTCATCCAGGGCCTCTTGCTGCAGAGGATTGACAGAGAATT
GGAAAAGGTTCTTGGTGCCGGTGACAGAGCCCGTGCCCCAGCTGACTGCTCAGTAGCCCAGTGG
GACCAGGAAGGAGCAGGTGAGCACCTCACAGGTTCTGGGTTGTGACAAGGAATGGCTGTGGTTA
TGCAGGGTGCTTAAGAGTATGGCAAGGGCGGAGTGGATGGAAAAGAACAGACTTTATCTCCTAT
CATGGCTGGGCTGGCCAGCATCATGGTGAACAGGCAGAGAAGCCACAGGTTCTGACACACACAT
TGGTGGAGATGGTGTTAGGTTTAGGCCCCAGTTTCTGCAGCCTACACACAGTGTGGTGGATGTC
TTGGCTATTACTTTCTGCTAACAATATTGGGAGGGGGATGGTGATGGTGGCTTGCTGTCAGCAA
AGGCACTCGGAGGCAAGATAACTTGGGCTCACTTGTTACATAGCCATTGCTGACTCAGATACTC
TGACCTTGATGTGGACCTAGTCAGTATTCACATGAAGTCACATGAGGGGAAGGAGCCATCGAAA
GACCCTTGGCGGGGTTGGGAATTTAGCTCAG

hide sequence

RefSeq Acc Id:

XM_017600215 ⟹ XP_017455704

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	16	18,341,242 - 18,352,571 (+)	NCBI
mRatBN7.2	16	18,307,260 - 18,318,589 (+)	NCBI
Rnor_6.0	16	20,028,524 - 20,037,615 (+)	NCBI

Sequence:

show sequence

TGGCCACAGCTGTACTCAGGCACATCTCCCAGGAGCTGGGGCCTCAGGAGCCAGCCGCATGCCA
GCTGTCTCACACCAAAGTGCGTACCACCAAGGAGGAGGCTATCCCGAGGAAACCTGGGGACCCA
ACTGCAGTTATCTCTCTGTGTTCTCAGTGGTGCTGACATGAGACTGCGGAAGTGGAGTTGGGGA
GGGCTGACCACAGGGCCTTTGCACAGATGAACCAGGAAGCTCTGGAGGTGAAGGCAGGCGGAGG
AGGACTGGGGAAGTGAATTCCCTGCAGGGGCACAGCATGTACAAAAGTCCTGAGGTTGGCAGCG
ACAGGCTAGATATGAGGGACTCCCAGTTTGTGTCGTGTGTGACTGCTCCATCTGTTGCAACCCT
ACCCTGCCAGGGAGACACTCTTCTATGAGACCCCATGTTTTTTGTCCTCTTGTCCCTCTGACCC
TGTGCCTATAGGCTCCCTGCTCTTGGCAGCTCAGAGGTTGTTATTGTAGTCTAACAGCCTGGAA
CTGTAGCTACTAATAGGCTCCCAGTGTTGGCATTCTGTCTAAGCTCCACCCCCACAGTTACCTG
GCAACAGCCAGGTATGCTCCGCCCCACAGTTACCTGGCAACAGCCAAGTATGCCTGACTCACTA
TAAAAGGGACATGTACCCTGACCAGCCCATCTGCACTGGCTACCTCTCTTAATAGAAGGACCAG
TGCTGGATGAGGCGTCTCTGGCGATGAGGAGTTTGGGGGTTTGGCGCTGTCCTTGGAGCGCGTG
ATAGGAGGGGTGAAAGTGGGTGCCAGTGCAGGGAGATTGGAGCGTCCTTCAGTTGGCACAGGAG
GGGAGGAGTCTGGAGAGGTCGATGGAGGAGGCTCTCCGGTAACCTGGTGAGGAGGAACTGAGGC
AGCGGCTTGGGTTTTTGGAAGTGTGGAAGCAGGCCTGCGGCAAAGGGGAGGCGGTTCATTAACT
GGGTCAAGGGCTGTACTGTCATCTGGTGCCTGTCTCTTAGATAAGAGAGGTTGGGTGGGGCTAC
AAGAGGAACACAGAGATGGGTTAGAGCGAAGGGAGATGAATGCATGGACTTAAAGAACCTCCTT
CCAGGGTTGGGGATTTAGCTCAGCGGTAGAGCGCTTGCCTAGCAAGCGCACTGGGTTCGGTCCC
CAGCTCCGGGAAAAAAAAAAAAAAAAAAAAAAAGAACCTCCTTCCATTTGCCAGACTGCTGGTA
GTAAGTATGAAGATCCCATAAAATTGAGGAATTTAGCCATTATGTGGCCATTTTGAACCATTGT
CTAATGAGTACTGAGTCCAGACATTATTCCAAAGGTGTTTCAGCTTGATGTCCTTAGGTGAGGC
ATTAGTGTTAAAGTTTTGAAATTCACCAAAAGACATCCCAATGGGGAATCTGGACGTATGTACG
AAGACAACAAATTACCCATTGGGGGAAGCTATTGAGTTATCCAGATGGGCAACCAAGGGCCTCC
ACCTCTCCCCTGTCTTGGAAGAGTCTTTGACTGATGAGGAAATTCAGGACCGGAAAGATAGGAA
GCTGCCTCGAGTCAGGGAGCACCAAGGACCCTTGACCCTGCTGCAGGGCCAGCCGCCACAATGG
CGGCCCATCTTCTGTGTTCTGCGTGGAGATGGACATCTAGAATGGTTCAGTCACAAGGAGAACT
ATGAGTCTGGGGGCTGTCCGCTAGGCTCCGCAGCTCTAACCGGGTATACACTGCTCACATCCCA
GCGTGAATACCTCTGCCTTTTGGATGACCTCTGCCCCAGCTCCTCTGGAGACCTTGCCCAGGAG
GAGCCGCTGCGGGTGTTGGAGGAGCCAGTGAGCTTCGCGCTCTTCCTCGTGCACCCCTTCCGGG
CTCACCTCTGCTTCTGCGCTGGCTCTAGAGGGGCGCAGCGCGCCTGGAGACTAGGCCTGCAGGG
TGCCATTCGGTTGAGAGCCACCGTCCTGCAGCGCAGCCGGGCGCCCGCAGCCTGCGCCTTCCTG
GACGCCGTGCAGCTCTATCGACGACGCCGGGGCTACGCTGGTGGAGATGACGCGGCACTGGGCT
CCGACGCGGAGGTGCTGAGCGCCGAGTTGATGCGAGAGCTATTGCCCGCGCTGCGAGCACAGAC
GCTCCGAGGCCTGCGCGGTGTGGGACGCGCCAGAGCCCGGGCCTGCGCAGAGTTCCTCGACGCC
GTGCACGCGGCCGTCCTGTCCTGGGCATCCTCGAGGCTGCGTGCCTTCCAGCCAGAAAAGGACG
CACTGCTGGCGGCGCTGGAGAGGATGGTGCGCGCAGACCTTGAGCAGATCCTGCAGCAGCGTGC
ACTCGGGGCCCGCAGAATAGAAGCCGAGATCCAGGACACACTAGAGACATGCCTGTGCCAGAAG
GTGGACCCGCAACTGCCCCAGCTGACCCTGGTGCTGGTGAGCCTCGTGGAAGCCACGCTCCAAG
CTGTTCGGACCCTTCTCATCCGGGGGATGGACCGTCTGTGTCACTACCTTCGCAAGAACCCTTC
TGGCACTCAGCTGCGCAGGGAGGTTTATGAATTTGGGGAGATACCCTGGGACCCAGAGCTGATG
CAGGTCTGCTACCGGGAGGCAGAGAGGAACCACAATCATCTGACCCAGCTGGCAAAACCCTTTG
GCTTCCTGGGGATGCGGAGCCTGGTGTTTGGGGCTCAAGACTTTGCACAACAGCTCATGGCGGC
TGCAGTTACCACCTTTCTACAGCTGGCCGACCAGTGTCTGACGTCGGCTCTGGATTGCAGCCAG
GCAGCTGAGCAGCTGGAGAAAGTCAGGGGCCTTGTGCTGAAGAAGTTCACCTCAGACAGTGAGA
CCACTCGGTGGAGGTTCACCCGGGACTGGCTGTTGGGGATCTTCTGGCCCTTTGTATGGGGCCA
TCTTGGGATGAGATGTAACTTGGAAACGCCTGAGGCAGATGGGGACATCCTGGCCGTGGGCTGC
CAGGTTCTGACCACCGAGGGTGTCTACAGGGATGTCATCCAGGGCCTCTTGCTGCAGAGGATTG
ACAGAGAATTGGAAAAGGTTCTTGGTGCCGGTGACAGAGCCCGTGCCCCAGCTGACTGCTCAGT
AGCCCAGTGGGACCAGGAAGGAGCAGGTGAGCACCTCACAGGTTCTGGGTTGTGACAAGGAATG
GCTGTGGTTATGCAGGGTGCTTAAGAGTATGGCAAGGGCGGAGTGGATGGAAAAGAACAGACTT
TATCTCCTATCATGGCTGGGCTGGCCAGCATCATGGTGAACAGGCAGAGAAGCCACAGGTTCTG
ACACACACATTGGTGGAGATGGTGTTAGGTTTAGGCCCCAGTTTCTGCAGCCTACACACAGTGT
GGTGGATGTCTTGGCTATTACTTTCTGCTAACAATATTGGGAGGGGGATGGTGATGGTGGCTTG
CTGTCAGCAAAGGCACTCGGAGGCAAGATAACTTGGGCTCACTTGTTACATAGCCATTGCTGAC
TCAGATACTCTGACCTTGATGTGGACCTAGTCAGTATTCACATGAAGTCACATGAGGGGAAGGA
GCCATCGAAAGACCCTTGGCGGGGTTGGGAATTTAGCTCAG

hide sequence

RefSeq Acc Id:

XM_039094758 ⟹ XP_038950686

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	16	18,341,108 - 18,352,571 (+)	NCBI
mRatBN7.2	16	18,307,122 - 18,318,589 (+)	NCBI

RefSeq Acc Id:

XM_039094760 ⟹ XP_038950688

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	16	18,341,242 - 18,352,571 (+)	NCBI
mRatBN7.2	16	18,307,260 - 18,318,589 (+)	NCBI

RefSeq Acc Id:

XM_039094761 ⟹ XP_038950689

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	16	18,341,109 - 18,352,571 (+)	NCBI
mRatBN7.2	16	18,307,122 - 18,318,589 (+)	NCBI

RefSeq Acc Id:

XM_039094762 ⟹ XP_038950690

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	16	18,343,128 - 18,352,571 (+)	NCBI
mRatBN7.2	16	18,309,146 - 18,318,589 (+)	NCBI

Protein Sequences


Protein RefSeqs	NP_001094378	(Get FASTA)	NCBI Sequence Viewer
	XP_017455703	(Get FASTA)	NCBI Sequence Viewer
	XP_017455704	(Get FASTA)	NCBI Sequence Viewer
	XP_038950686	(Get FASTA)	NCBI Sequence Viewer
	XP_038950688	(Get FASTA)	NCBI Sequence Viewer
	XP_038950689	(Get FASTA)	NCBI Sequence Viewer
	XP_038950690	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAI11078	(Get FASTA)	NCBI Sequence Viewer
	EDL90768	(Get FASTA)	NCBI Sequence Viewer
	EDL90769	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000030537.4
	ENSRNOP00000086449.1

RefSeq Acc Id:

NP_001094378 ⟸ NM_001100908

- UniProtKB:

Q2NL48 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MGAQPSCPLSKKQQQQLRGQVDGLLRTFLPCYRRQLATAVLRHISQELGPQEPAACQLSHTKKL
PRVREHQGPLTLLQGQPPQWRPIFCVLRGDGHLEWFSHKENYESGGCPLGSAALTGYTLLTSQR
EYLCLLDDLCPSSSGDLAQEEPLRVLEEPVSFALFLVHPFRAHLCFCAGSRGAQRAWRLGLQGA
IRLRATVLQRSRAPAACAFLDAVQLYRRRRGYAGGDDAALGSDAEVLSAELMRELLPALRAQTL
RGLRGVGRARARACAEFLDAVHAAVLSWASSRLRAFQPEKDALLAALERMVRADLEQILQQRAL
GARRIEAEIQDTLETCLCQKVDPQLPQLTLVLVSLVEATLQAVRTLLIRGMDRLCHYLRKNPSG
TQLRREVYEFGEIPWDPELMQVCYREAERNHNHLTQLAKPFGFLGMRSLVFGAQDFAQQLMAAA
VTTFLQLADQCLTSALDCSQAAEQLEKVRGLVLKKFTSDSETTRWRFTRDWLLGIFWPFVWGHL
GMRCNLETPEADGDILAVGCQVLTTEGVYRDVIQGLLLQRIDRELEKVLGAGDRARAPADCSVA
QWDQEGADEEAEAQI

hide sequence

RefSeq Acc Id:

XP_017455703 ⟸ XM_017600214

- Peptide Label:

isoform X6

- Sequence:

show sequence

MGAQPSCPLSKKQQQQLRGQVDGLLRTFLPCYRRQLATAVLRHISQELGPQEPAACQLSHTKKL
PRVREHQGPLTLLQGQPPQWRPIFCVLRGDGHLEWFSHKENYESGGCPLGSAALTGYTLLTSQR
EYLCLLDDLCPSSSGDLAQEEPLRVLEEPVSFALFLVHPFRAHLCFCAGSRGAQRAWRLGLQGA
IRLRATVLQRSRAPAACAFLDAVQLYRRRRGYAGGDDAALGSDAEVLSAELMRELLPALRAQTL
RGLRGVGRARARACAEFLDAVHAAVLSWASSRLRAFQPEKDALLAALERMVRADLEQILQQRAL
GARRIEAEIQDTLETCLCQKVDPQLPQLTLVLVSLVEATLQAVRTLLIRGMDRLCHYLRKNPSG
TQLRREVYEFGEIPWDPELMQVCYREAERNHNHLTQLAKPFGFLGMRSLVFGAQDFAQQLMAAA
VTTFLQLADQCLTSALDCSQAAEQLEKVRGLVLKKFTSDSETTRWRFTRDWLLGIFWPFVWGHL
GMRCNLETPEADGDILAVGCQVLTTEGVYRDVIQGLLLQRIDRELEKVLGAGDRARAPADCSVA
QWDQEGAGEHLTGSGL

hide sequence

RefSeq Acc Id:	XP_017455704 ⟸ XM_017600215
- Peptide Label:	isoform X1
- UniProtKB:	A0A8I6A3N5 (UniProtKB/TrEMBL)
- Sequence:	show sequence MGNLDVCTKTTNYPLGEAIELSRWATKGLHLSPVLEESLTDEEIQDRKDRKLPRVREHQGPLTL LQGQPPQWRPIFCVLRGDGHLEWFSHKENYESGGCPLGSAALTGYTLLTSQREYLCLLDDLCPS SSGDLAQEEPLRVLEEPVSFALFLVHPFRAHLCFCAGSRGAQRAWRLGLQGAIRLRATVLQRSR APAACAFLDAVQLYRRRRGYAGGDDAALGSDAEVLSAELMRELLPALRAQTLRGLRGVGRARAR ACAEFLDAVHAAVLSWASSRLRAFQPEKDALLAALERMVRADLEQILQQRALGARRIEAEIQDT LETCLCQKVDPQLPQLTLVLVSLVEATLQAVRTLLIRGMDRLCHYLRKNPSGTQLRREVYEFGE IPWDPELMQVCYREAERNHNHLTQLAKPFGFLGMRSLVFGAQDFAQQLMAAAVTTFLQLADQCL TSALDCSQAAEQLEKVRGLVLKKFTSDSETTRWRFTRDWLLGIFWPFVWGHLGMRCNLETPEAD GDILAVGCQVLTTEGVYRDVIQGLLLQRIDRELEKVLGAGDRARAPADCSVAQWDQEGAGEHLT GSGL hide sequence

Ensembl Acc Id:

ENSRNOP00000030537 ⟸ ENSRNOT00000034589

RefSeq Acc Id:	XP_038950686 ⟸ XM_039094758
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_038950689 ⟸ XM_039094761
- Peptide Label:	isoform X4

RefSeq Acc Id:	XP_038950688 ⟸ XM_039094760
- Peptide Label:	isoform X3

RefSeq Acc Id:	XP_038950690 ⟸ XM_039094762
- Peptide Label:	isoform X5
- UniProtKB:	A6K9W9 (UniProtKB/TrEMBL)

Ensembl Acc Id:

ENSRNOP00000086449 ⟸ ENSRNOT00000107728

Protein Domains

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-Q2NL48-F1-model_v2	AlphaFold	Q2NL48	1-591	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1566103	AgrOrtholog
BioCyc Gene	G2FUF-11832	BioCyc
Ensembl Genes	ENSRNOG00000039357	Ensembl, UniProtKB/TrEMBL
Ensembl Transcript	ENSRNOT00000034589.6	UniProtKB/TrEMBL
	ENSRNOT00000107728.1	UniProtKB/TrEMBL
Gene3D-CATH	2.30.29.30	UniProtKB/TrEMBL
IMAGE_CLONE	IMAGE:7374004	IMAGE-MGC_LOAD
InterPro	Niban_like	UniProtKB/TrEMBL
	PH_type	UniProtKB/TrEMBL
	Pleckstrin_homology	UniProtKB/TrEMBL
KEGG Report	rno:498604	UniProtKB/TrEMBL
MGC_CLONE	MGC:125058	IMAGE-MGC_LOAD
NCBI Gene	498604	ENTREZGENE
PANTHER	PROTEIN NIBAN 3	UniProtKB/TrEMBL
	PTHR14392	UniProtKB/TrEMBL
PhenoGen	Niban3	PhenoGen
RatGTEx	ENSRNOG00000039357	RatGTEx
SMART	SM00233	UniProtKB/TrEMBL
Superfamily-SCOP	PH domain-like	UniProtKB/TrEMBL
UniProt	A0A8I6A3N5	ENTREZGENE, UniProtKB/TrEMBL
	A6K9W9	ENTREZGENE, UniProtKB/TrEMBL
	Q2NL48	ENTREZGENE, UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2019-04-29	Niban3	niban apoptosis regulator 3	Fam129c	family with sequence similarity 129, member C	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2010-04-21	Fam129c	family with sequence similarity 129, member C	LOC498604	similar to B-cell novel protein 1	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2006-02-09	LOC498604	similar to B-cell novel protein 1			Symbol and Name status set to provisional	70820	PROVISIONAL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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