Lekr1 (leucine, glutamate and lysine rich 1)

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Gene: Lekr1 (leucine, glutamate and lysine rich 1) Rattus norvegicus

Analyze

Symbol:

Lekr1

Name:

leucine, glutamate and lysine rich 1

RGD ID:

1565425

Description:

Orthologous to human LEKR1 (leucine, glutamate and lysine rich 1); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 2,3,7,8-Tetrachlorodibenzofuran; acetamide.

Type:

protein-coding

RefSeq Status:

PROVISIONAL

Previously known as:

hypothetical protein LOC691104; leucine-, glutamate- and lysine-rich protein 1; LOC361953; LOC691104; RGD1562738; RGD1565425; similar to Restin

RGD Orthologs

Human

Mouse

Chinchilla

Bonobo

Dog

Squirrel

Pig

Green Monkey

Naked Mole-Rat

Alliance Genes

More Info

more info ...

Latest Assembly:

mRatBN7.2 - mRatBN7.2 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
mRatBN7.2	2	149,889,615 - 150,061,167 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	2	149,891,106 - 150,060,469 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	2	156,993,726 - 157,168,707 (+)	NCBI	Rnor_SHR
UTH_Rnor_SHRSP_BbbUtx_1.0	2	155,044,220 - 155,219,213 (+)	NCBI	Rnor_SHRSP
UTH_Rnor_WKY_Bbb_1.0	2	149,676,915 - 149,851,916 (+)	NCBI	Rnor_WKY
Rnor_6.0	2	157,451,912 - 157,621,908 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	2	157,453,428 - 157,620,210 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	2	176,820,259 - 176,989,613 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	2	155,462,085 - 155,632,219 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
Celera	2	144,303,340 - 144,474,116 (+)	NCBI		Celera
Cytogenetic Map	2	q31	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

genetic disease (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

2,3,7,8-tetrachlorodibenzodioxine (EXP,ISO)

2,3,7,8-Tetrachlorodibenzofuran (EXP)

acetamide (EXP)

acrylamide (EXP)

aflatoxin B1 (ISO)

all-trans-retinoic acid (ISO)

antirheumatic drug (ISO)

aristolochic acid A (ISO)

benzo[a]pyrene (ISO)

bisphenol A (EXP,ISO)

furan (EXP)

gentamycin (EXP)

orphenadrine (EXP)

propanal (ISO)

sodium fluoride (ISO)

thioacetamide (EXP)

trichloroethene (EXP)

trovafloxacin (ISO)

valproic acid (ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	ClinVar Automated Import and Annotation Pipeline	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
2.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

Additional References at PubMed

PMID:12477932

Genomics

Comparative Map Data

Lekr1
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
mRatBN7.2	2	149,889,615 - 150,061,167 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	2	149,891,106 - 150,060,469 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	2	156,993,726 - 157,168,707 (+)	NCBI	Rnor_SHR
UTH_Rnor_SHRSP_BbbUtx_1.0	2	155,044,220 - 155,219,213 (+)	NCBI	Rnor_SHRSP
UTH_Rnor_WKY_Bbb_1.0	2	149,676,915 - 149,851,916 (+)	NCBI	Rnor_WKY
Rnor_6.0	2	157,451,912 - 157,621,908 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	2	157,453,428 - 157,620,210 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	2	176,820,259 - 176,989,613 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	2	155,462,085 - 155,632,219 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
Celera	2	144,303,340 - 144,474,116 (+)	NCBI		Celera
Cytogenetic Map	2	q31	NCBI

LEKR1
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	3	156,826,353 - 157,046,129 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p13 Ensembl	3	156,825,481 - 157,046,129 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	3	156,544,142 - 156,763,918 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	3	158,026,790 - 158,246,612 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Celera	3	154,967,679 - 155,187,419 (+)	NCBI		Celera
Cytogenetic Map	3	q25.31	NCBI
HuRef	3	153,940,639 - 154,160,281 (+)	NCBI		HuRef
CHM1_1	3	156,507,104 - 156,726,943 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	3	159,601,066 - 159,820,688 (+)	NCBI		T2T-CHM13v2.0

Lekr1
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	3	65,566,960 - 65,743,948 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	3	65,573,649 - 65,738,776 (+)	Ensembl		GRCm39 Ensembl
GRCm38	3	65,659,539 - 65,836,527 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	3	65,666,228 - 65,831,355 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	3	65,470,150 - 65,635,084 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	3	65,754,197 - 65,774,108 (+)	NCBI		MGSCv36	mm8
Celera	3	65,803,071 - 65,969,461 (+)	NCBI		Celera
Cytogenetic Map	3	E1	NCBI

Lekr1
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0	NW_004955448	7,834,824 - 8,030,085 (+)	NCBI	ChiLan1.0	ChiLan1.0

LEKR1
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1	3	154,742,296 - 154,962,526 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	3	153,881,467 - 154,095,829 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	3	161,935,058 - 162,149,152 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	3	161,935,058 - 162,149,152 (+)	Ensembl	panpan1.1		panPan2

LEKR1
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	23	50,389,960 - 50,561,281 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	23	50,370,297 - 50,558,916 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	23	50,263,523 - 50,434,235 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	23	51,023,131 - 51,194,527 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	23	51,003,114 - 51,192,140 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	23	50,607,155 - 50,778,135 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	23	50,658,190 - 50,830,259 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	23	50,944,819 - 51,114,766 (+)	NCBI		UU_Cfam_GSD_1.0

Lekr1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405602	85,761,031 - 85,923,313 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936519	3,825,371 - 3,971,925 (+)	Ensembl	SpeTri2.0
SpeTri2.0	NW_004936519	3,810,766 - 3,972,956 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

LEKR1
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	13	96,652,441 - 96,879,731 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	13	96,641,062 - 96,882,709 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	13	104,757,949 - 104,997,283 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

LEKR1
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	15	33,709,322 - 33,928,662 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
Vero_WHO_p1.0	NW_023666041	6,303,548 - 6,542,781 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Lekr1
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla 1.0	NW_004624730	34,400,015 - 34,641,002 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in Lekr1
773 total Variants

miRNA Target Status

Predicted Target Of

	Summary Value
Count of predictions:	39
Count of miRNA genes:	38
Interacting mature miRNAs:	39
Transcripts:	ENSRNOT00000051494
Prediction methods:	Miranda, Rnahybrid
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (mRatBN7.2)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
1358894	Kidm24	Kidney mass QTL 24	4.03		kidney mass (VT:0002707)	both kidneys wet weight to body weight ratio (CMO:0000340)	2	25413423	157142209	Rat
1358899	Kidm23	Kidney mass QTL 23	3.88		kidney mass (VT:0002707)	both kidneys wet weight to body weight ratio (CMO:0000340)	2	25413423	157142209	Rat
1358901	Cm38	Cardiac mass QTL 38	2		heart mass (VT:0007028)	heart weight to body weight ratio (CMO:0000074)	2	25413423	157142209	Rat
1358904	Cm39	Cardiac mass QTL 39	2.26		heart mass (VT:0007028)	heart weight to body weight ratio (CMO:0000074)	2	25413423	157142209	Rat
1358910	Kidm27	Kidney mass QTL 27	5.77		kidney mass (VT:0002707)	both kidneys wet weight to body weight ratio (CMO:0000340)	2	25413423	157142209	Rat
1358911	Kidm28	Kidney mass QTL 28	5.42		kidney mass (VT:0002707)	both kidneys wet weight to body weight ratio (CMO:0000340)	2	25413423	157142209	Rat
1358913	Cm41	Cardiac mass QTL 41	2.73		heart mass (VT:0007028)	heart weight to body weight ratio (CMO:0000074)	2	25413423	203928301	Rat
1358917	Cm42	Cardiac mass QTL 42	2.82		heart mass (VT:0007028)	heart weight to body weight ratio (CMO:0000074)	2	25413423	203928301	Rat
1358887	Bw50	Body weight QTL 50	2.39		body mass (VT:0001259)	body weight (CMO:0000012)	2	25413652	157142078	Rat
1358908	Bw49	Body weight QTL 49	3.36		body mass (VT:0001259)	body weight (CMO:0000012)	2	25413652	157142078	Rat
2293835	Kiddil5	Kidney dilation QTL 5	3.8		kidney pelvis morphology trait (VT:0004194)	hydronephrosis severity score (CMO:0001208)	2	42804607	157142209	Rat
2293843	Kiddil6	Kidney dilation QTL 6	3.1		kidney pelvis morphology trait (VT:0004194)	hydronephrosis severity score (CMO:0001208)	2	42804607	182042367	Rat
1298074	Bp164	Blood pressure QTL 164		0.003	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	2	42804607	202447032	Rat
1298085	Bp165	Blood pressure QTL 165		0.0006	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	2	42804607	202447032	Rat
61467	Bp14	Blood pressure QTL 14	2.2		arterial blood pressure trait (VT:2000000)	diastolic blood pressure (CMO:0000005)	2	43154682	202446871	Rat
61467	Bp14	Blood pressure QTL 14	2.2		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	2	43154682	202446871	Rat
1354601	Slep1	Serum leptin concentration QTL 1	5.39		blood leptin amount (VT:0005667)	serum leptin level (CMO:0000780)	2	43171017	184114403	Rat
631266	Bp132	Blood pressure QTL 132		0.0005	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	2	46123260	202447032	Rat
1331760	Bp206	Blood pressure QTL 206	3.62454		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	2	56043031	202447032	Rat
1298080	Bp163	Blood pressure QTL 163		0.02	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	2	66118275	202447032	Rat
1354648	Bp239	Blood pressure QTL 239		0.001	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	2	66118463	226797303	Rat
1558653	Prcr1	Prostate cancer resistance QTL 1	5		prostate integrity trait (VT:0010571)	area of ventral prostate occupied by tumorous lesions to total ventral prostate area ratio (CMO:0000899)	2	72532993	157142209	Rat
1354605	Rf48	Renal function QTL 48	2.9		blood creatinine amount (VT:0005328)	plasma creatinine level (CMO:0000537)	2	74786664	206665859	Rat
631198	Cm22	Cardiac mass QTL 22	4.3	0.0008	heart left ventricle mass (VT:0007031)	heart left ventricle weight to body weight ratio (CMO:0000530)	2	76539322	150540526	Rat
61374	Edpm2	Estrogen-dependent pituitary mass QTL 2	4.42	0.86	pituitary gland mass (VT:0010496)	pituitary gland wet weight (CMO:0000853)	2	76539322	202447032	Rat
1581569	Uae32	Urinary albumin excretion QTL 32		0.0001	urine protein amount (VT:0005160)	urine albumin excretion rate (CMO:0000757)	2	78665619	219826953	Rat
724534	Uae6	Urinary albumin excretion QTL 6	10		urine albumin amount (VT:0002871)	urine albumin level (CMO:0000130)	2	78665619	249053267	Rat
8662832	Vetf7	Vascular elastic tissue fragility QTL 7	3.5		aorta elastin amount (VT:0003905)	aorta wall extracellular elastin dry weight to aorta wall dry weight ratio (CMO:0002002)	2	81689826	221035911	Rat
1354622	Kidm16	Kidney mass QTL 16	3		kidney mass (VT:0002707)	left kidney wet weight (CMO:0000083)	2	81754530	222436696	Rat
1354649	Kidm17	Kidney mass QTL 17	2.9		kidney mass (VT:0002707)	calculated kidney weight (CMO:0000160)	2	81754530	227146641	Rat
631507	Bp105	Blood pressure QTL 105		0.001	arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	2	112456140	212696837	Rat
634308	Sach6	Saccharin preference QTL 6	4.9		taste sensitivity trait (VT:0001986)	saccharin intake volume to total fluid intake volume ratio (CMO:0001601)	2	112456140	212696837	Rat
1354594	Despr10	Despair related QTL 10		0.00000249	locomotor behavior trait (VT:0001392)	amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)	2	114654253	159654253	Rat
1359030	Bp277	Blood pressure QTL 277			arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	2	114837527	185876470	Rat
1359030	Bp277	Blood pressure QTL 277			arterial blood pressure trait (VT:2000000)	diastolic blood pressure (CMO:0000005)	2	114837527	185876470	Rat
1578648	Bss11	Bone structure and strength QTL 11	4.7		femur morphology trait (VT:0000559)	femoral neck cortical cross-sectional area (CMO:0001702)	2	114837527	211674221	Rat
1554319	Bmd2	Bone mineral density QTL 2	13.4	0.0001	lumbar vertebra area (VT:0010570)	lumbar vertebra cross-sectional area (CMO:0001689)	2	114837675	212549332	Rat
1582257	Gluco21	Glucose level QTL 21	3.1	0.0035	blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	2	118111229	157142209	Rat
738007	Anxrr7	Anxiety related response QTL 7	4.4		exploratory behavior trait (VT:0010471)	number of entries into a discrete space in an experimental apparatus (CMO:0000960)	2	118189491	163189491	Rat
1358360	Sradr2	Stress Responsive Adrenal Weight QTL 2	10.24		adrenal gland mass (VT:0010420)	both adrenal glands wet weight (CMO:0000164)	2	129164097	152195315	Rat
6907363	Bp357	Blood pressure QTL 357	4.1	0.002	arterial blood pressure trait (VT:2000000)	diastolic blood pressure (CMO:0000005)	2	129540907	174540907	Rat
1300165	Rf9	Renal function QTL 9	3.28		kidney glomerulus integrity trait (VT:0010546)	index of glomerular damage (CMO:0001135)	2	133914684	202447032	Rat
70175	BpQTLCluster3	Blood pressure QTL cluster 3	4.128		arterial blood pressure trait (VT:2000000)	diastolic blood pressure (CMO:0000005)	2	135552573	202446871	Rat
70175	BpQTLCluster3	Blood pressure QTL cluster 3	4.128		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	2	135552573	202446871	Rat
70175	BpQTLCluster3	Blood pressure QTL cluster 3	4.128		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	2	135552573	202446871	Rat
70175	BpQTLCluster3	Blood pressure QTL cluster 3	4.128		arterial blood pressure trait (VT:2000000)	pulse pressure (CMO:0000292)	2	135552573	202446871	Rat
70175	BpQTLCluster3	Blood pressure QTL cluster 3	4.128		arterial blood pressure trait (VT:2000000)	absolute change in systolic blood pressure (CMO:0000607)	2	135552573	202446871	Rat
1298076	Bp166	Blood pressure QTL 166		0.0009	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	2	136445150	202447032	Rat
1581502	Esta3	Estrogen-induced thymic atrophy QTL 3			thymus mass (VT:0004954)	thymus wet weight (CMO:0000855)	2	136916935	189599348	Rat
1359022	Ppulsi1	Prepulse inhibition QTL 1	3.63		prepulse inhibition trait (VT:0003088)	acoustic startle response measurement (CMO:0001519)	2	136916935	213594495	Rat
1331794	Bp202	Blood pressure QTL 202	3.66819		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	2	141194931	223265385	Rat
1331805	Cm29	Cardiac mass QTL 29	3.50746		heart mass (VT:0007028)	heart wet weight (CMO:0000069)	2	141194931	223265385	Rat
71113	Cari2	Carrageenan-induced inflammation QTL 2	2.7	0.009	hypodermis integrity trait (VT:0010550)	inflammatory exudate volume (CMO:0001429)	2	141596551	202447032	Rat
1549828	Bp258	Blood pressure QTL 258		0.03	arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	2	142323368	150650069	Rat
724568	Uae13	Urinary albumin excretion QTL 13	4.4		urine albumin amount (VT:0002871)	urine albumin excretion rate (CMO:0000757)	2	143157029	210020885	Rat
10043136	Iddm54	Insulin dependent diabetes mellitus QTL 54	3.4	0.0001	blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	2	143657411	190602963	Rat
10043136	Iddm54	Insulin dependent diabetes mellitus QTL 54	3.4	0.0001	blood glucose amount (VT:0000188)	age at onset/diagnosis of type 1 diabetes mellitus (CMO:0001140)	2	143657411	190602963	Rat
6903312	Bw112	Body weight QTL 112	3.2	0.0013	body mass (VT:0001259)	body weight (CMO:0000012)	2	143657569	184114274	Rat
61401	Niddm2	Non-insulin dependent diabetes mellitus QTL 2	4.54		blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	2	144599348	189599348	Rat
631520	Bp73	Blood pressure QTL 73		0.0001	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	2	147686913	168355276	Rat
1598833	Bp295	Blood pressure QTL 295	3.5		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	2	147798556	192798556	Rat
1641925	Alcrsp2	Alcohol response QTL 2			response to alcohol trait (VT:0010489)	duration of loss of righting reflex (CMO:0002289)	2	149559561	221167075	Rat
1641891	Alcrsp17	Alcohol response QTL 17			response to alcohol trait (VT:0010489)	duration of loss of righting reflex (CMO:0002289)	2	149559561	249053267	Rat

Markers in Region

D2Got109

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	2	150,058,033 - 150,058,212 (+)	MAPPER	mRatBN7.2
Rnor_6.0	2	157,618,775 - 157,618,953	NCBI	Rnor6.0
Rnor_5.0	2	176,986,480 - 176,986,658	UniSTS	Rnor5.0
RGSC_v3.4	2	155,630,783 - 155,630,962	RGD	RGSC3.4
RGSC_v3.4	2	155,630,784 - 155,630,962	UniSTS	RGSC3.4
RGSC_v3.1	2	155,580,747 - 155,580,925	RGD
Celera	2	144,472,681 - 144,472,859	UniSTS
RH 3.4 Map	2	973.0	UniSTS
RH 3.4 Map	2	973.0	RGD
RH 2.0 Map	2	702.9	RGD
Cytogenetic Map	2	q31	UniSTS

AU046989

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	2	149,923,713 - 149,923,814 (+)	MAPPER	mRatBN7.2
Rnor_6.0	2	157,484,262 - 157,484,362	NCBI	Rnor6.0
Rnor_5.0	2	176,852,529 - 176,852,629	UniSTS	Rnor5.0
RGSC_v3.4	2	155,494,689 - 155,494,789	UniSTS	RGSC3.4
Celera	2	144,335,984 - 144,336,084	UniSTS
Cytogenetic Map	2	q31	UniSTS

Expression

RNA-SEQ Expression

High: > 1000 TPM value Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM Below Cutoff: < 0.5 TPM

	alimentary part of gastrointestinal system	circulatory system	endocrine system	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	appendage
High
Medium											8
Low	2	42	26	10	19	10	8	8	72	34	33	11	8
Below cutoff	1	1	27	27		27		2	2	1

View RNA-SEQ Expression Data

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001115029	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006232472	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006232473	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006232474	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006232475	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017590967	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039102616	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039102617	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039102618	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039102619	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039102620	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039102621	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	BC107462	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC158627	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CA339992	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JACYVU010000069	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Reference Sequences

RefSeq Acc Id:

ENSRNOT00000051494 ⟹ ENSRNOP00000040531

RefSeq Status:

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	2	149,891,106 - 150,004,037 (+)	Ensembl
Rnor_6.0 Ensembl	2	157,453,428 - 157,620,210 (+)	Ensembl

RefSeq Acc Id:

ENSRNOT00000094805 ⟹ ENSRNOP00000091894

RefSeq Status:

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	2	149,891,106 - 149,968,529 (+)	Ensembl

RefSeq Acc Id:

ENSRNOT00000098221 ⟹ ENSRNOP00000087054

RefSeq Status:

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	2	149,891,106 - 150,060,469 (+)	Ensembl

RefSeq Acc Id:

ENSRNOT00000109693 ⟹ ENSRNOP00000088793

RefSeq Status:

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	2	149,891,106 - 149,909,122 (+)	Ensembl

RefSeq Acc Id:

ENSRNOT00000110326 ⟹ ENSRNOP00000086081

RefSeq Status:

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	2	149,891,106 - 149,964,699 (+)	Ensembl

RefSeq Acc Id:

ENSRNOT00000118137 ⟹ ENSRNOP00000078646

RefSeq Status:

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	2	149,891,106 - 150,004,037 (+)	Ensembl

RefSeq Acc Id:

NM_001115029 ⟹ NP_001108501

RefSeq Status:

PROVISIONAL

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	2	149,891,106 - 150,059,469 (+)	NCBI
Rnor_6.0	2	157,453,428 - 157,620,210 (+)	NCBI
Rnor_5.0	2	176,820,259 - 176,989,613 (+)	NCBI
RGSC_v3.4	2	155,462,085 - 155,632,219 (+)	RGD
Celera	2	144,303,340 - 144,474,116 (+)	RGD

Sequence:

show sequence

CGTTTTACACCCAGCGGAGTCCCGGGCTAGGTGAGGGTCATGGCCTTTCTCAGTTCTCAGAGGA
CCAGGCCGGCAGGGACTTTGTTCCGGGGCTAAGGCCAGCCGCGCGGGACGGCGGGGCAGCGGGG
GCGGGGAGGAGGAAGGCAGGGCGGCCTCTCGGTGCCTCGGGCGAGGCCTGGGCCGGCGCGGTCG
AGTCGGGCAGTTAGTTTCCTGCAGTCGCGGGGCGTGACCTCCCGCTCTCCTGCCCCTGACCTGC
CCTCTTGTGAATCACGGCCCGGGAATGGTACTAGAGGAAGGGCCTGGAAGCAGAACCGGAGTTA
ATGACCGGGCGTGACACCGGTGTAAGAGTCGGAAATGAACCACCAAGGACGTTTCGGCATTTAA
GAACACACACGTCTATCTCGTGACCAGTGTCACAGAGAAGCCTGTTTTTCTGCAGTGCTCTCTC
AGTGCGATTAGAGGAGTCATGGATCGTCACATTCCCATGCACGCCTTACCCAAAGAAATCCAAC
AGATGTCTCCTGAAGAAACAGTTTGTAAATACTGTGGCGTCAGCTACCTAATTCTACATGAATT
TAAGGCTATGGAAGAAAAACTGAAAGCGGTGCAAGAAGAATTGAAATTTTATCAAGGAAGTATA
GAACGAGAAAAGAGACTTCAAGAAAAGCTGCAGTCTCTTAGCCAGGAGTTTGAAAAGTATAAAA
CTGACAGCGAATCCAAGAAGGAAAGAGTTCAACATGCAAGCATGCAGTTAAAAAAGCAACAAAA
TGAATTTCAGAGAGTACAGAAAGAATTAAGTCATCTACAACTTGAGTTAAAAATTAAACAAAAA
CAATCTCAAGTCTTCAGTCAAAGATTGTCAGAATACAAATACTTCTGGAATAAGACTCTTTTAT
TACTTACTTTTACTAAAAGGGAACTAACAAGTATTAAATATGAAATAAATGATAATTTTCAAAA
CTGGACTTCACTGAAAGGAGAAGTGTTTCTACAAATTAAATCTATAAGTGATACAGCCTTGGCA
GAGATAGATATGTTAAATAAGAGTCTGACAGTGTCTCAGAGAAATAAGGTAAGCCTGGAAGAGG
AAATGAAATGTCTCAAAGTGTTGTCGGATGCAGCCATATTGAGGTCTCAGCAGATGGAGGCGTC
CAAGCAGCATGAAGTGAACCTGCAAGCCAGGTGCTACGAGCTGCAGAAGGAGGCACTGGATTTA
CAGTGTCAAGTAGAGGCCCTTGGGCTGAGACTTCAGAAGACAGTGAAGGAGCTGGACAACTGTA
AAGAGATGCTCATGAAAAAATCTAATGATGCTAATAACTGTGAAAGAGAACTTAGAAAACTGAA
GTTTGAGTCCATTATCTCTGAGTCAAGGCACAAAAGGCTACTTAAAGAAAAAGAAGACTCTTTA
ATTACTTGTCAACAACTATATAAAACCGTACAGGAAGAGCTGACTACAAAAGGGAGACAAGAGG
AAGATATAAAGCGAAGAATCAACCTTGCCGAAAATGAACTAGAGATGACCAAAACGCTCCTGCT
TCAGACACAGGAAGAAATTTTAACGCTGAAAAATGAAAGGGAATTGATGCTGGTTTCTCATCAG
AAAAGCATCGAGCAGCTGCAGGAAACCCTGAGACAGAAGCTGCTGAGCGATGACAGCTGGAGGG
AGAAGATTGAAGCTGAGCTCAGCAAGGAAAGAGCCCGGCATCGCATTGAGTTCCAGGACCAAGC
TCTTCTCTTTAAGGAGGAAGCTAAACTGGAACTTGACATTGAAAAAGAAAAGCACCAGGAAATA
ATCCGGAAGTATCAGAAAGAACAAGAGGGCCTGCAGAGCAAGATAGCTGACCTAATCGCAGATG
CTACAAAAGACCTGAGGCTGGAAGTGGCCTCTCTCCAAGAAAAACTCCATGAGTCCCATGCGCG
GTACACAGAAGAGTCTGAGTCAAAGAAAAAAGAAATTGAAGACCTGAAAAATCTGGTTGCAGAA
TTGGAGTGTCGTTTGAAGGAGGAAACTGGCCATGATGATTCAGTTTCCAAAGAGTTGAAGAAGG
AAATGAAACAGAAGTCAGATGAGCTGGAAAGAGTAAGGCTGGCCCAGACACAGCTGCTGCAGCA
GTTCAGCCAGTCACAGGAAGAGAACACTTTTCTCCAGGAAACAGTGCGCAGAGAGTGTGAAGAA
CGCTTTGAACTGACAGAGGCTTTGAGTCAAGCCAAAGAACAGCTCCTGGAGCTTAAGAGGAGCG
GAGGAAGCTTACGGTGTTCCCTCAATAAGGGTGCCCTAACCCACCCTGTCTCGGCAGTCAGTAA
TCACCGCGAGCTAAGCAATGTGAGACACAACTGTGGACGAGGCACCAGCTCGGCCAGCCTGCGC
GGACTGCCAAAACCCACCGCAACCCCAACCCCAGATAAACTCAAGAAGGTCGACAGCTCCGGAC
TGCCTGCCCTTTCCCAGGCATATCCTCCCAGGGGCCGAGCAATTTCAGTAACCGAGGCCAGGCA
GAGGTTGACAGCCATCATTCGCAGGAGGCTGAGTCAGCAGCGATGA

hide sequence

RefSeq Acc Id:

XM_006232472 ⟹ XP_006232534

RefSeq Status:

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	2	149,889,624 - 150,061,167 (+)	NCBI
Rnor_6.0	2	157,451,913 - 157,621,908 (+)	NCBI
Rnor_5.0	2	176,820,259 - 176,989,613 (+)	NCBI

Sequence:

show sequence

TTTTCTCTATTCTTCTCTCATACATCCCAACTGTATCTTCCTTGCCCTCTACTCCTCCAGGCCC
CTGCCCCCAATCTCCCCTCTCCCCCAGATTCACTGCTCCTCCATTTTTCTTCAGGAAAGTCCAA
GCCTTCTAGTAATATTCACTAAACACGGCATAACAAGATGCAATCGGACTAGGCACAAATTCAC
ATGGGGCACCCCTACAGAAAGTCTGGCTTGTGGCTAATCAGCAATGAGATTTAGGTTTGAGGGG
CAGTTATAGTGGCAAGGAAAATGGACTCAGGGTGATGTGTAATGAGTAGGCATAGATGAAAGTG
AATTACAGCGTTTCCACGGTATTTTACCCCACTTTCAGACGGGTGCCTTCCCTTTTAGATATAA
ATGCTCAGTAAGGAATATTATCGCCAAAACTGTAGTTATGTGCTCTATAACAGTATTTTTGGTT
AATAACAGACCAGTACACTGGCTATACAATTTCTAATATCCAGTGATGTTAAAGTTATGGTAAC
ATTTTGTGCAATGCATAACTCAAGTGTTTGTGGTGATGCTGTCGGAAGCCTTCTGTTTCTAGCA
CACTGGTATGTATTCAATATGGCACATAATAATAGTTACACAATAGTAAGTAACTGTTGTTTCT
GTATTAACTATACCTTTCATGACTTAGGGAAGTATTCACTATTTTCATGTGGCTATTTTCAAAC
TAGGTATCAACCAGCAGCTTCAATAGTTCTGGCACTATTTTGAACCACTTTTTCACCCTCCTCT
CTTCAGTGTCTTTTCTTTCTATTCATGCAAATTATTCTTTAACAGTAATTACTGTCTTTTCTGC
AAAGAAACTGTTTTCTTTAGTTCCTGGAGTATCAGCACTTTAGACCGCAGATAATCCTGAAAAA
GGAGCAGACTACGAAGAAGACACTAATCATACTAGTGGCCTGTGTTAGTCACCAAGCATCATCT
CATCCTGCTTGCTTGTCTCGTAGTAGGTCATCAATATTTGTTTTATGAATAAAGTATGAATAAA
GGTAAGTCGTCAGTGCGTAAAAACCTGAGGCCTTCCACAATTTGAGTGTTCAATAGCACGTCTC
ATTAACAGTTCATGAGCTAAACCTTTCATCTTGACTTTCGGAATAGAATGAAATTCTACGCAAG
CCTTCCCCAGTCAATCTGCCCTCGCGGCAATGGCTGAGGATGTGCTGTCATTCCATTTAAAAGC
ATCTTTTTCCTCCTCTTGAGAGCAATGATTGCCCCTGCAGTAGACCACACTGCCCCCCACTTCC
GCTGCCTGTCGTCCCCACGGGTTCCAGACCTCAACCCGGTCCGTCACAGAACCGCGCGTAAATC
CGCCCTCTCCTCCGACCCCCGCCGCCTTCGCCAGCTTCCGTCTAGCTCGCTTTTGGGACAAGTG
ATGCAAAGGAGCTCTGCTTCCGCGTCGGCGACGGCGTGGGCAGTGACGTCACTGCGCTCTGACG
TCAGGACAACGTGCAGTGCGGTCGCCCGGGAGACCGGGGAAGCCGTTTTACACCCAGCGGAGTC
CCGGGCTAGCCTGTTTTTCTGCAGTGCTCTCTCAGTGCGATTAGAGGAGTCATGGATCGTCACA
TTCCCATGCACGCCTTACCCAAAGAAATCCAACAGAGTTCAACATGCAAGCATGCAGTTAAAAA
AGCAACAAAATGAATTTCAGAGAGTACAGAAAGAATTAAGTCATCTACAACTTGAGTTAAAAAT
TAAACAAAAACAATCTCAAGTCTTCAGTCAAAGATTGTCAGAATACAAATACTTCTGGAATAAG
ACTCTTTTATTACTTACTTTTACTAAAAGGGAACTAACAAGTATTAAATATGAAATAAATGATA
ATTTTCAAAACTGGACTTCACTGAAAGGAGAAGTGTTTCTACAAATTAAATCTATAAGTGATAC
AGCCTTGGCAGAGATAGATATGTTAAATAAGAGTCTGACAGTGTCTCAGAGAAATAAGGTAAGC
CTGGAAGAGGAAATGAAATGTCTCAAAGTGTTGTCGGATGCAGCCATATTGAGGTCTCAGCAGA
TGGAGGCGTCCAAGCAGCATGAAGTGAACCTGCAAGCCAGGTGCTACGAGCTGCAGAAGGAGGC
ACTGGATTTACAGTGTCAAGTAGAGGCCCTTGGGCTGAGACTTCAGAAGACAGTGAAGGAGCTG
GACAACTGTAAAGAGATGCTCATGAAAAAATCTAATGATGCTAATAACTGTGAAAGAGAACTTA
GAAAACTGAAGTTTGAGTCCATTATCTCTGAGTCAAGGCACAAAAGGCTACTTAAAGAAAAAGA
AGACTCTTTAATTACTTGTCAACAACTATATAAAACCGTACAGGAAGAGCTGACTACAAAAGGG
AGACAAGAGGAAGATATAAAGCGAAGAATCAACCTTGCCGAAAATGAACTAGAGATGACCAAAA
CGCTCCTGCTTCAGACACAGGAAGAAATTTTAACGCTGAAAAATGAAAGGGAATTGATGCTGGT
TTCTCATCAGAAAAGCATCGAGCAGCTGCAGGAAACCCTGAGACAGAAGCTGCTGAGCGATGAC
AGCTGGAGGGAGAAGATTGAAGCTGAGCTCAGCAAGGAAAGAGCCCGGCATCGCATTGAGTTCC
AGGACCAAGCTCTTCTCTTTAAGGAGGAAGCTAAACTGGAACTTGACATTGAAAAAGAAAAGCA
CCAGGAAATAATCCGGAAGTATCAGAAAGAACAAGAGGGCCTGCAGAGCAAGATAGCTGACCTA
ATCGCAGATGCTACAAAAGACCTGAGGCTGGAAGTGGCCTCTCTCCAAGAAAAACTCCATGAGT
CCCATGCGCGGTACACAGAAGAGTCTGAGTCAAAGAAAAAAGAAATTGAAGACCTGAAAAATCT
GGTTGCAGAATTGGAGTGTCGTTTGAAGGAGGAAACTGGCCATGATGATTCAGTTTCCAAAGAG
TTGAAGAAGGAAATGAAACAGAAGTCAGATGAGCTGGAAAGAGTAAGGCTGGCCCAGACACAGC
TGCTGCAGCAGTTCAGCCAGTCACAGGAAGAGAACACTTTTCTCCAGGAAACAGTGCGCAGAGA
GTGTGAAGAACGCTTTGAACTGACAGAGGCTTTGAGTCAAGCCAAAGAACAGCTCCTGGAGCTT
AAGAGGAGCGGAGGAAGCTTACGGTGTTCCCTCAATAAGGGTGCCCTAACCCACCCTGTCTCGG
CAGTCAGTAATCACCGCGAGCTAAGCAATGTGAGACACAACTGTGGACGAGGCACCAGCTCGGC
CAGCCTGCGCGGACTGCCAAAACCCACCGCAACCCCAACCCCAGATAAACTCAAGAAGGTCGAC
AGCTCCGGACTGCCTGCCCTTTCCCAGGCATATCCTCCCAGGGGCCGAGCAATTTCAGTAACCG
AGGCCAGGCAGAGGTTGACAGCCATCATTCGCAGGAGGCTGAGTCAGCAGCGATGACCTGCTTG
GGAGGGTTCCACCCTCGGTGTATACCCCCTTGCACAGCAAGGCAGTGACTCACTGTAACCGGGT
GCCAGGAAACAAACATGTACGAAGCTAGAACTGTGAAGACACAGTTTTCAAAGGGCCTCAGAGA
CTGCAACAGATAATGAAGCTGGTACTCCAGAGATCTGACTTCTACGTTCATGTATATATTTTAT
ACTCTTCAAATCTGGCCCTTAGAGACCACAGGGAAAAACTTCTCATCCTGGCGAGTTTTTCTCT
TCCTCCCTCACTTCCTGTCTTCCATCCCCCACCCTTCCTCTCCTTTTTCTACCATAGCAAGTAG
CATATCGACACAAAATAGATTATATTGGCTTTATAGCATTTTTTCATTTGTTTATTGAACTAAA
TAGATGTAAGCATTCCAACTAGAAAAAGAAAGTCCTTAATTGATTTCCAAAGTCCTTATAATAT
TTACAGAGCTAATAATCATCTTCAAATGCTCAGCGTACCTGGTTATCTGACTGCTTTGTAGACT
GGGTCAAAAGTAAGGATAGCCTTTTAGAAGACTATCTGCTGTGGGTCTCGGACCTCGTACAAAA
GACAGTGATTCCCATTCAAGGAAAAGTAGTTTGAATCTCTAATTATGAATATCACTTTAGAAAA
CGACATGACCATGAAAATACATCTTAGTGCATATTTCTGCATTGAATACTTTTTGGTACACAGC
TGAGTTCTATTGAACTTGTATTTTCCAGCCATGGGGAAGAGAACTAACACAAGGTCACTTAGTA
AAAAAAAATACAAGGCTAATTTGGATTCAAAATTGATTACCCTTGAAAGTGTCTAACTGATTAA
CAGTTTCTATTCTCAGTGTGAGAATGTAAAACAAGATACGCTATTTAAAGTTACCAAGCTCTGG
CTCATGTAGCTGATCTTACCTCCAGCAACCATTCATCTGTCTTTTCTCCATCTGATAGGACTGT
ATTTGTCTTTATAATGGGGGAGGGGGACCAAATCTGATATATCATGGACATTAAACTTTCCTCG
TCTCATATAGGAATACTAGTAACTTGTGATTATAGCACATTTAATTATCTATTTGGCTGCAGTG
TTGATGAGAGAAAACAGTGGTTCTAGCATCCTAACCATGGCATAAAAGAGTGACATCACTAAAC
AAAACCACAGTTATCTCCGTCTTTTTAAGACTTATAAACCGCTTTAACCTTAAAATGATTCCAC
ATTAGCTCCCTGGCTACTTTAGGTAAGATATCTCTGTGTTAAGGATTAGGATGCTGTCCGTTGT
TTACAGAGGGGCCATTCTTCATAATGGCTTTGCACGAGAGAGCACAAACTACAGAAGAGTGGCT
CAAGGATTGCCCTCGCCCTCTCCACAGATAAGAAGCAGACGAAAAGCATGTTACTTGGCTAAAG
GAGTATACTTAGAGACAGAGTCGAACCAGGACCACTGTCACTTAATCCCAGTCTCTCCAACCTT
AAAAGCTTCCCAGGCTCCACCATGACTGTTGTCAACAGCACCCACACTGTAGTTAATTAACATT
GTTTCCTCCTTAAGTGCACCGACTTTTGAAACTTGAGTTGTATAAGAAGGAAATTGATTCAGGG
AAGAGTAATGATAAAGTAACAAATGTCCTTTGCTAATTATACTTTTCTAGAGAACTCTAAGTGT
GCATCTATTAAAACAAGAAATGTTAA

hide sequence

RefSeq Acc Id:

XM_006232473 ⟹ XP_006232535

RefSeq Status:

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	2	149,891,005 - 150,061,167 (+)	NCBI
Rnor_6.0	2	157,453,372 - 157,621,908 (+)	NCBI
Rnor_5.0	2	176,820,259 - 176,989,613 (+)	NCBI

Sequence:

show sequence

CTGCGCTCTGACGTCAGGACAACGTGCAGTGCGGTCGCCCGGGAGACCGGGGAAGCCGTTTTAC
ACCCAGCGGAGTCCCGGGCTAGCCTGTTTTTCTGCAGTGCTCTCTCAGTGCGATTAGAGGAGTC
ATGGATCGTCACATTCCCATGCACGCCTTACCCAAAGAAATCCAACAGATGTCTCCTGAAGAAA
CAGTTTGTAAATACTGTGGCGTCAGCTACCTAATTCTACATGAATTTAAGGCTATGGAAGAAAA
ACTGAAAGCGGTGCAAGAAGAATTGAAATTTTATCAAGGAAGTATAGAACGAGAAAAGAGACTT
CAAGAAAAGCTGCAGTCTCTTAGCCAGGAGTTTGAAAAGTATAAAACTGACAGCGAATCCAAGA
AGGAAAGAGTTCAACATGCAAGCATGCAGTTAAAAAAGCAACAAAATGAATTTCAGAGAGTACA
GAAAGAATTAAGTCATCTACAACTTGAGTTAAAAATTAAACAAAAACAATCTCAAGTCTTCAGT
CAAAGATTGTCAGAATACAAATACTTCTGGAATAAGACTCTTTTATTACTTACTTTTACTAAAA
GGGAACTAACAAGTATTAAATATGAAATAAATGATAATTTTCAAAACTGGACTTCACTGAAAGG
AGAAGTGTTTCTACAAATTAAATCTATAAGTGATACAGCCTTGGCAGAGATAGATATGTTAAAT
AAGAGTCTGACAGTGTCTCAGAGAAATAAGGTAAGCCTGGAAGAGGAAATGAAATGTCTCAAAG
TGTTGTCGGATGCAGCCATATTGAGGTCTCAGCAGATGGAGGCGTCCAAGCAGCATGAAGTGAA
CCTGCAAGCCAGGTGCTACGAGCTGCAGAAGGAGGCACTGGATTTACAGTGTCAAGTAGAGGCC
CTTGGGCTGAGACTTCAGAAGACAGTGAAGGAGCTGGACAACTGTAAAGAGATGCTCATGAAAA
AATCTAATGATGCTAATAACTGTGAAAGAGAACTTAGAAAACTGAAGTTTGAGTCCATTATCTC
TGAGTCAAGGCACAAAAGGCTACTTAAAGAAAAAGAAGACTCTTTAATTACTTGTCAACAACTA
TATAAAACCGTACAGGAAGAGCTGACTACAAAAGGGAGACAAGAGGAAGATATAAAGCGAAGAA
TCAACCTTGCCGAAAATGAACTAGAGATGACCAAAACGCTCCTGCTTCAGACACAGGAAGAAAT
TTTAACGCTGAAAAATGAAAGGGAATTGATGCTGGTTTCTCATCAGAAAAGCATCGAGCAGCTG
CAGGAAACCCTGAGACAGAAGCTGCTGAGCGATGACAGCTGGAGGGAGAAGATTGAAGCTGAGC
TCAGCAAGGAAAGAGCCCGGCATCGCATTGAGTTCCAGGACCAAGCTCTTCTCTTTAAGGAGGA
AGCTAAACTGGAACTTGACATTGAAAAAGAAAAGCACCAGGAAATAATCCGGAAGTATCAGAAA
GAACAAGAGGGCCTGCAGAGCAAGATAGCTGACCTAATCGCAGATGCTACAAAAGACCTGAGGC
TGGAAGTGGCCTCTCTCCAAGAAAAACTCCATGAGTCCCATGCGCGGTACACAGAAGAGTCTGA
GTCAAAGAAAAAAGAAATTGAAGACCTGAAAAATCTGGTTGCAGAATTGGAGTGTCGTTTGAAG
GAGGAAACTGGCCATGATGATTCAGTTTCCAAAGAGTTGAAGAAGGAAATGAAACAGAAGTCAG
ATGAGCTGGAAAGAGTAAGGCTGGCCCAGACACAGCTGCTGCAGCAGTTCAGCCAGTCACAGGA
AGAGAACACTTTTCTCCAGGAAACAGTGCGCAGAGAGTGTGAAGAACGCTTTGAACTGACAGAG
GCTTTGAGTCAAGCCAAAGAACAGCTCCTGGAGCTTAAGAGGAGCGGAGGAAGCTTACGGTGTT
CCCTCAATAAGGGTGCCCTAACCCACCCTGTCTCGGCAGTCAGTAATCACCGCGAGCTAAGCAA
TGTGAGACACAACTGTGGACGAGGCACCAGCTCGGCCAGCCTGCGCGGACTGCCAAAACCCACC
GCAACCCCAACCCCAGATAAACTCAAGAAGGTCGACAGCTCCGGACTGCCTGCCCTTTCCCAGG
CATATCCTCCCAGGGGCCGAGCAATTTCAGTAACCGAGGCCAGGCAGAGGTTGACAGCCATCAT
TCGCAGGAGGCTGAGTCAGCAGCGATGACCTGCTTGGGAGGGTTCCACCCTCGGTGTATACCCC
CTTGCACAGCAAGGCAGTGACTCACTGTAACCGGGTGCCAGGAAACAAACATGTACGAAGCTAG
AACTGTGAAGACACAGTTTTCAAAGGGCCTCAGAGACTGCAACAGATAATGAAGCTGGTACTCC
AGAGATCTGACTTCTACGTTCATGTATATATTTTATACTCTTCAAATCTGGCCCTTAGAGACCA
CAGGGAAAAACTTCTCATCCTGGCGAGTTTTTCTCTTCCTCCCTCACTTCCTGTCTTCCATCCC
CCACCCTTCCTCTCCTTTTTCTACCATAGCAAGTAGCATATCGACACAAAATAGATTATATTGG
CTTTATAGCATTTTTTCATTTGTTTATTGAACTAAATAGATGTAAGCATTCCAACTAGAAAAAG
AAAGTCCTTAATTGATTTCCAAAGTCCTTATAATATTTACAGAGCTAATAATCATCTTCAAATG
CTCAGCGTACCTGGTTATCTGACTGCTTTGTAGACTGGGTCAAAAGTAAGGATAGCCTTTTAGA
AGACTATCTGCTGTGGGTCTCGGACCTCGTACAAAAGACAGTGATTCCCATTCAAGGAAAAGTA
GTTTGAATCTCTAATTATGAATATCACTTTAGAAAACGACATGACCATGAAAATACATCTTAGT
GCATATTTCTGCATTGAATACTTTTTGGTACACAGCTGAGTTCTATTGAACTTGTATTTTCCAG
CCATGGGGAAGAGAACTAACACAAGGTCACTTAGTAAAAAAAAATACAAGGCTAATTTGGATTC
AAAATTGATTACCCTTGAAAGTGTCTAACTGATTAACAGTTTCTATTCTCAGTGTGAGAATGTA
AAACAAGATACGCTATTTAAAGTTACCAAGCTCTGGCTCATGTAGCTGATCTTACCTCCAGCAA
CCATTCATCTGTCTTTTCTCCATCTGATAGGACTGTATTTGTCTTTATAATGGGGGAGGGGGAC
CAAATCTGATATATCATGGACATTAAACTTTCCTCGTCTCATATAGGAATACTAGTAACTTGTG
ATTATAGCACATTTAATTATCTATTTGGCTGCAGTGTTGATGAGAGAAAACAGTGGTTCTAGCA
TCCTAACCATGGCATAAAAGAGTGACATCACTAAACAAAACCACAGTTATCTCCGTCTTTTTAA
GACTTATAAACCGCTTTAACCTTAAAATGATTCCACATTAGCTCCCTGGCTACTTTAGGTAAGA
TATCTCTGTGTTAAGGATTAGGATGCTGTCCGTTGTTTACAGAGGGGCCATTCTTCATAATGGC
TTTGCACGAGAGAGCACAAACTACAGAAGAGTGGCTCAAGGATTGCCCTCGCCCTCTCCACAGA
TAAGAAGCAGACGAAAAGCATGTTACTTGGCTAAAGGAGTATACTTAGAGACAGAGTCGAACCA
GGACCACTGTCACTTAATCCCAGTCTCTCCAACCTTAAAAGCTTCCCAGGCTCCACCATGACTG
TTGTCAACAGCACCCACACTGTAGTTAATTAACATTGTTTCCTCCTTAAGTGCACCGACTTTTG
AAACTTGAGTTGTATAAGAAGGAAATTGATTCAGGGAAGAGTAATGATAAAGTAACAAATGTCC
TTTGCTAATTATACTTTTCTAGAGAACTCTAAGTGTGCATCTATTAAAACAAGAAATGTTAA

hide sequence

RefSeq Acc Id:

XM_006232474 ⟹ XP_006232536

RefSeq Status:

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	2	149,891,142 - 150,061,167 (+)	NCBI
Rnor_6.0	2	157,453,464 - 157,621,908 (+)	NCBI
Rnor_5.0	2	176,820,259 - 176,989,613 (+)	NCBI

Sequence:

show sequence

GTCATGGCCTTTCTCAGTTCTCAGAGGACCAGGCCGGCAGGGACTTTGTTCCGGGGCTAAGGCC
AGCCGCGCGGGACGGCGGGGCAGCGGGGGCGGGGAGGAGGAAGGCAGGGCGGCCTCTCGGTGCC
TCGGGCGAGGCCTGGGCCGGCGCGGTCGAGTCGGGCAGTTAGTTTCCTGCAGTCGCGGGGCGTG
ACCTCCCGCTCTCCTGCCCCTGACCTGCCCTCTTGTGAATCACGGCCCGGGAATGGTACTAGAG
GAAGGGCCTGGAAGCAGAACCGGAGTTAATGACCGGGCGTGACACCGGTGTAAGAGTCGGAAAT
GAACCACCAAGGACGTTTCGGCATTTAAGAACACACACGTCTATCTCGTGACCAGTGTCACAGA
GAAGATGTCTCCTGAAGAAACAGTTTGTAAATACTGTGGCGTCAGCTACCTAATTCTACATGAA
TTTAAGGCTATGGAAGAAAAACTGAAAGCGGTGCAAGAAGAATTGAAATTTTATCAAGGAAGTA
TAGAACGAGAAAAGAGACTTCAAGAAAAGCTGCAGTCTCTTAGCCAGGAGTTTGAAAAGTATAA
AACTGACAGCGAATCCAAGAAGGAAAGAGTTCAACATGCAAGCATGCAGTTAAAAAAGCAACAA
AATGAATTTCAGAGAGTACAGAAAGAATTAAGTCATCTACAACTTGAGTTAAAAATTAAACAAA
AACAATCTCAAGTCTTCAGTCAAAGATTGTCAGAATACAAATACTTCTGGAATAAGACTCTTTT
ATTACTTACTTTTACTAAAAGGGAACTAACAAGTATTAAATATGAAATAAATGATAATTTTCAA
AACTGGACTTCACTGAAAGGAGAAGTGTTTCTACAAATTAAATCTATAAGTGATACAGCCTTGG
CAGAGATAGATATGTTAAATAAGAGTCTGACAGTGTCTCAGAGAAATAAGGTAAGCCTGGAAGA
GGAAATGAAATGTCTCAAAGTGTTGTCGGATGCAGCCATATTGAGGTCTCAGCAGATGGAGGCG
TCCAAGCAGCATGAAGTGAACCTGCAAGCCAGGTGCTACGAGCTGCAGAAGGAGGCACTGGATT
TACAGTGTCAAGTAGAGGCCCTTGGGCTGAGACTTCAGAAGACAGTGAAGGAGCTGGACAACTG
TAAAGAGATGCTCATGAAAAAATCTAATGATGCTAATAACTGTGAAAGAGAACTTAGAAAACTG
AAGTTTGAGTCCATTATCTCTGAGTCAAGGCACAAAAGGCTACTTAAAGAAAAAGAAGACTCTT
TAATTACTTGTCAACAACTATATAAAACCGTACAGGAAGAGCTGACTACAAAAGGGAGACAAGA
GGAAGATATAAAGCGAAGAATCAACCTTGCCGAAAATGAACTAGAGATGACCAAAACGCTCCTG
CTTCAGACACAGGAAGAAATTTTAACGCTGAAAAATGAAAGGGAATTGATGCTGGTTTCTCATC
AGAAAAGCATCGAGCAGCTGCAGGAAACCCTGAGACAGAAGCTGCTGAGCGATGACAGCTGGAG
GGAGAAGATTGAAGCTGAGCTCAGCAAGGAAAGAGCCCGGCATCGCATTGAGTTCCAGGACCAA
GCTCTTCTCTTTAAGGAGGAAGCTAAACTGGAACTTGACATTGAAAAAGAAAAGCACCAGGAAA
TAATCCGGAAGTATCAGAAAGAACAAGAGGGCCTGCAGAGCAAGATAGCTGACCTAATCGCAGA
TGCTACAAAAGACCTGAGGCTGGAAGTGGCCTCTCTCCAAGAAAAACTCCATGAGTCCCATGCG
CGGTACACAGAAGAGTCTGAGTCAAAGAAAAAAGAAATTGAAGACCTGAAAAATCTGGTTGCAG
AATTGGAGTGTCGTTTGAAGGAGGAAACTGGCCATGATGATTCAGTTTCCAAAGAGTTGAAGAA
GGAAATGAAACAGAAGTCAGATGAGCTGGAAAGAGTAAGGCTGGCCCAGACACAGCTGCTGCAG
CAGTTCAGCCAGTCACAGGAAGAGAACACTTTTCTCCAGGAAACAGTGCGCAGAGAGTGTGAAG
AACGCTTTGAACTGACAGAGGCTTTGAGTCAAGCCAAAGAACAGCTCCTGGAGCTTAAGAGGAG
CGGAGGAAGCTTACGGTGTTCCCTCAATAAGGGTGCCCTAACCCACCCTGTCTCGGCAGTCAGT
AATCACCGCGAGCTAAGCAATGTGAGACACAACTGTGGACGAGGCACCAGCTCGGCCAGCCTGC
GCGGACTGCCAAAACCCACCGCAACCCCAACCCCAGATAAACTCAAGAAGGTCGACAGCTCCGG
ACTGCCTGCCCTTTCCCAGGCATATCCTCCCAGGGGCCGAGCAATTTCAGTAACCGAGGCCAGG
CAGAGGTTGACAGCCATCATTCGCAGGAGGCTGAGTCAGCAGCGATGACCTGCTTGGGAGGGTT
CCACCCTCGGTGTATACCCCCTTGCACAGCAAGGCAGTGACTCACTGTAACCGGGTGCCAGGAA
ACAAACATGTACGAAGCTAGAACTGTGAAGACACAGTTTTCAAAGGGCCTCAGAGACTGCAACA
GATAATGAAGCTGGTACTCCAGAGATCTGACTTCTACGTTCATGTATATATTTTATACTCTTCA
AATCTGGCCCTTAGAGACCACAGGGAAAAACTTCTCATCCTGGCGAGTTTTTCTCTTCCTCCCT
CACTTCCTGTCTTCCATCCCCCACCCTTCCTCTCCTTTTTCTACCATAGCAAGTAGCATATCGA
CACAAAATAGATTATATTGGCTTTATAGCATTTTTTCATTTGTTTATTGAACTAAATAGATGTA
AGCATTCCAACTAGAAAAAGAAAGTCCTTAATTGATTTCCAAAGTCCTTATAATATTTACAGAG
CTAATAATCATCTTCAAATGCTCAGCGTACCTGGTTATCTGACTGCTTTGTAGACTGGGTCAAA
AGTAAGGATAGCCTTTTAGAAGACTATCTGCTGTGGGTCTCGGACCTCGTACAAAAGACAGTGA
TTCCCATTCAAGGAAAAGTAGTTTGAATCTCTAATTATGAATATCACTTTAGAAAACGACATGA
CCATGAAAATACATCTTAGTGCATATTTCTGCATTGAATACTTTTTGGTACACAGCTGAGTTCT
ATTGAACTTGTATTTTCCAGCCATGGGGAAGAGAACTAACACAAGGTCACTTAGTAAAAAAAAA
TACAAGGCTAATTTGGATTCAAAATTGATTACCCTTGAAAGTGTCTAACTGATTAACAGTTTCT
ATTCTCAGTGTGAGAATGTAAAACAAGATACGCTATTTAAAGTTACCAAGCTCTGGCTCATGTA
GCTGATCTTACCTCCAGCAACCATTCATCTGTCTTTTCTCCATCTGATAGGACTGTATTTGTCT
TTATAATGGGGGAGGGGGACCAAATCTGATATATCATGGACATTAAACTTTCCTCGTCTCATAT
AGGAATACTAGTAACTTGTGATTATAGCACATTTAATTATCTATTTGGCTGCAGTGTTGATGAG
AGAAAACAGTGGTTCTAGCATCCTAACCATGGCATAAAAGAGTGACATCACTAAACAAAACCAC
AGTTATCTCCGTCTTTTTAAGACTTATAAACCGCTTTAACCTTAAAATGATTCCACATTAGCTC
CCTGGCTACTTTAGGTAAGATATCTCTGTGTTAAGGATTAGGATGCTGTCCGTTGTTTACAGAG
GGGCCATTCTTCATAATGGCTTTGCACGAGAGAGCACAAACTACAGAAGAGTGGCTCAAGGATT
GCCCTCGCCCTCTCCACAGATAAGAAGCAGACGAAAAGCATGTTACTTGGCTAAAGGAGTATAC
TTAGAGACAGAGTCGAACCAGGACCACTGTCACTTAATCCCAGTCTCTCCAACCTTAAAAGCTT
CCCAGGCTCCACCATGACTGTTGTCAACAGCACCCACACTGTAGTTAATTAACATTGTTTCCTC
CTTAAGTGCACCGACTTTTGAAACTTGAGTTGTATAAGAAGGAAATTGATTCAGGGAAGAGTAA
TGATAAAGTAACAAATGTCCTTTGCTAATTATACTTTTCTAGAGAACTCTAAGTGTGCATCTAT
TAAAACAAGAAATGTTAA

hide sequence

RefSeq Acc Id:

XM_006232475 ⟹ XP_006232537

RefSeq Status:

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	2	149,891,064 - 150,061,167 (+)	NCBI
Rnor_6.0	2	157,453,383 - 157,621,908 (+)	NCBI
Rnor_5.0	2	176,820,259 - 176,989,613 (+)	NCBI

Sequence:

show sequence

CGTCAGGACAACGTGCAGTGCGGTCGCCCGGGAGACCGGGGAAGCCGTTTTACACCCAGCGGAG
TCCCGGGCTAGATGTCTCCTGAAGAAACAGTTTGTAAATACTGTGGCGTCAGCTACCTAATTCT
ACATGAATTTAAGGCTATGGAAGAAAAACTGAAAGCGGTGCAAGAAGAATTGAAATTTTATCAA
GGAAGTATAGAACGAGAAAAGAGACTTCAAGAAAAGCTGCAGTCTCTTAGCCAGGAGTTTGAAA
AGTATAAAACTGACAGCGAATCCAAGAAGGAAAGAGTTCAACATGCAAGCATGCAGTTAAAAAA
GCAACAAAATGAATTTCAGAGAGTACAGAAAGAATTAAGTCATCTACAACTTGAGTTAAAAATT
AAACAAAAACAATCTCAAGTCTTCAGTCAAAGATTGTCAGAATACAAATACTTCTGGAATAAGA
CTCTTTTATTACTTACTTTTACTAAAAGGGAACTAACAAGTATTAAATATGAAATAAATGATAA
TTTTCAAAACTGGACTTCACTGAAAGGAGAAGTGTTTCTACAAATTAAATCTATAAGTGATACA
GCCTTGGCAGAGATAGATATGTTAAATAAGAGTCTGACAGTGTCTCAGAGAAATAAGGTAAGCC
TGGAAGAGGAAATGAAATGTCTCAAAGTGTTGTCGGATGCAGCCATATTGAGGTCTCAGCAGAT
GGAGGCGTCCAAGCAGCATGAAGTGAACCTGCAAGCCAGGTGCTACGAGCTGCAGAAGGAGGCA
CTGGATTTACAGTGTCAAGTAGAGGCCCTTGGGCTGAGACTTCAGAAGACAGTGAAGGAGCTGG
ACAACTGTAAAGAGATGCTCATGAAAAAATCTAATGATGCTAATAACTGTGAAAGAGAACTTAG
AAAACTGAAGTTTGAGTCCATTATCTCTGAGTCAAGGCACAAAAGGCTACTTAAAGAAAAAGAA
GACTCTTTAATTACTTGTCAACAACTATATAAAACCGTACAGGAAGAGCTGACTACAAAAGGGA
GACAAGAGGAAGATATAAAGCGAAGAATCAACCTTGCCGAAAATGAACTAGAGATGACCAAAAC
GCTCCTGCTTCAGACACAGGAAGAAATTTTAACGCTGAAAAATGAAAGGGAATTGATGCTGGTT
TCTCATCAGAAAAGCATCGAGCAGCTGCAGGAAACCCTGAGACAGAAGCTGCTGAGCGATGACA
GCTGGAGGGAGAAGATTGAAGCTGAGCTCAGCAAGGAAAGAGCCCGGCATCGCATTGAGTTCCA
GGACCAAGCTCTTCTCTTTAAGGAGGAAGCTAAACTGGAACTTGACATTGAAAAAGAAAAGCAC
CAGGAAATAATCCGGAAGTATCAGAAAGAACAAGAGGGCCTGCAGAGCAAGATAGCTGACCTAA
TCGCAGATGCTACAAAAGACCTGAGGCTGGAAGTGGCCTCTCTCCAAGAAAAACTCCATGAGTC
CCATGCGCGGTACACAGAAGAGTCTGAGTCAAAGAAAAAAGAAATTGAAGACCTGAAAAATCTG
GTTGCAGAATTGGAGTGTCGTTTGAAGGAGGAAACTGGCCATGATGATTCAGTTTCCAAAGAGT
TGAAGAAGGAAATGAAACAGAAGTCAGATGAGCTGGAAAGAGTAAGGCTGGCCCAGACACAGCT
GCTGCAGCAGTTCAGCCAGTCACAGGAAGAGAACACTTTTCTCCAGGAAACAGTGCGCAGAGAG
TGTGAAGAACGCTTTGAACTGACAGAGGCTTTGAGTCAAGCCAAAGAACAGCTCCTGGAGCTTA
AGAGGAGCGGAGGAAGCTTACGGTGTTCCCTCAATAAGGGTGCCCTAACCCACCCTGTCTCGGC
AGTCAGTAATCACCGCGAGCTAAGCAATGTGAGACACAACTGTGGACGAGGCACCAGCTCGGCC
AGCCTGCGCGGACTGCCAAAACCCACCGCAACCCCAACCCCAGATAAACTCAAGAAGGTCGACA
GCTCCGGACTGCCTGCCCTTTCCCAGGCATATCCTCCCAGGGGCCGAGCAATTTCAGTAACCGA
GGCCAGGCAGAGGTTGACAGCCATCATTCGCAGGAGGCTGAGTCAGCAGCGATGACCTGCTTGG
GAGGGTTCCACCCTCGGTGTATACCCCCTTGCACAGCAAGGCAGTGACTCACTGTAACCGGGTG
CCAGGAAACAAACATGTACGAAGCTAGAACTGTGAAGACACAGTTTTCAAAGGGCCTCAGAGAC
TGCAACAGATAATGAAGCTGGTACTCCAGAGATCTGACTTCTACGTTCATGTATATATTTTATA
CTCTTCAAATCTGGCCCTTAGAGACCACAGGGAAAAACTTCTCATCCTGGCGAGTTTTTCTCTT
CCTCCCTCACTTCCTGTCTTCCATCCCCCACCCTTCCTCTCCTTTTTCTACCATAGCAAGTAGC
ATATCGACACAAAATAGATTATATTGGCTTTATAGCATTTTTTCATTTGTTTATTGAACTAAAT
AGATGTAAGCATTCCAACTAGAAAAAGAAAGTCCTTAATTGATTTCCAAAGTCCTTATAATATT
TACAGAGCTAATAATCATCTTCAAATGCTCAGCGTACCTGGTTATCTGACTGCTTTGTAGACTG
GGTCAAAAGTAAGGATAGCCTTTTAGAAGACTATCTGCTGTGGGTCTCGGACCTCGTACAAAAG
ACAGTGATTCCCATTCAAGGAAAAGTAGTTTGAATCTCTAATTATGAATATCACTTTAGAAAAC
GACATGACCATGAAAATACATCTTAGTGCATATTTCTGCATTGAATACTTTTTGGTACACAGCT
GAGTTCTATTGAACTTGTATTTTCCAGCCATGGGGAAGAGAACTAACACAAGGTCACTTAGTAA
AAAAAAATACAAGGCTAATTTGGATTCAAAATTGATTACCCTTGAAAGTGTCTAACTGATTAAC
AGTTTCTATTCTCAGTGTGAGAATGTAAAACAAGATACGCTATTTAAAGTTACCAAGCTCTGGC
TCATGTAGCTGATCTTACCTCCAGCAACCATTCATCTGTCTTTTCTCCATCTGATAGGACTGTA
TTTGTCTTTATAATGGGGGAGGGGGACCAAATCTGATATATCATGGACATTAAACTTTCCTCGT
CTCATATAGGAATACTAGTAACTTGTGATTATAGCACATTTAATTATCTATTTGGCTGCAGTGT
TGATGAGAGAAAACAGTGGTTCTAGCATCCTAACCATGGCATAAAAGAGTGACATCACTAAACA
AAACCACAGTTATCTCCGTCTTTTTAAGACTTATAAACCGCTTTAACCTTAAAATGATTCCACA
TTAGCTCCCTGGCTACTTTAGGTAAGATATCTCTGTGTTAAGGATTAGGATGCTGTCCGTTGTT
TACAGAGGGGCCATTCTTCATAATGGCTTTGCACGAGAGAGCACAAACTACAGAAGAGTGGCTC
AAGGATTGCCCTCGCCCTCTCCACAGATAAGAAGCAGACGAAAAGCATGTTACTTGGCTAAAGG
AGTATACTTAGAGACAGAGTCGAACCAGGACCACTGTCACTTAATCCCAGTCTCTCCAACCTTA
AAAGCTTCCCAGGCTCCACCATGACTGTTGTCAACAGCACCCACACTGTAGTTAATTAACATTG
TTTCCTCCTTAAGTGCACCGACTTTTGAAACTTGAGTTGTATAAGAAGGAAATTGATTCAGGGA
AGAGTAATGATAAAGTAACAAATGTCCTTTGCTAATTATACTTTTCTAGAGAACTCTAAGTGTG
CATCTATTAAAACAAGAAATGTTAA

hide sequence

RefSeq Acc Id:

XM_017590967 ⟹ XP_017446456

RefSeq Status:

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	2	149,889,620 - 150,061,167 (+)	NCBI
Rnor_6.0	2	157,451,912 - 157,621,908 (+)	NCBI

Sequence:

show sequence

TTTTTCTCTATTCTTCTCTCATACATCCCAACTGTATCTTCCTTGCCCTCTACTCCTCCAGGCC
CCTGCCCCCAATCTCCCCTCTCCCCCAGATTCACTGCTCCTCCATTTTTCTTCAGGAAAGTCCA
AGCCTTCTAGTAATATTCACTAAACACGGCATAACAAGATGCAATCGGACTAGGCACAAATTCA
CATGGGGCACCCCTACAGAAAGTCTGGCTTGTGGCTAATCAGCAATGAGATTTAGGTTTGAGGG
GCAGTTATAGTGGCAAGGAAAATGGACTCAGGGTGATGTGTAATGAGTAGGCATAGATGAAAGT
GAATTACAGCGTTTCCACGGTATTTTACCCCACTTTCAGACGGGTGCCTTCCCTTTTAGATATA
AATGCTCAGTAAGGAATATTATCGCCAAAACTGTAGTTATGTGCTCTATAACAGTATTTTTGGT
TAATAACAGACCAGTACACTGGCTATACAATTTCTAATATCCAGTGATGTTAAAGTTATGGTAA
CATTTTGTGCAATGCATAACTCAAGTGTTTGTGGTGATGCTGTCGGAAGCCTTCTGTTTCTAGC
ACACTGGTATGTATTCAATATGGCACATAATAATAGTTACACAATAGTAAGTAACTGTTGTTTC
TGTATTAACTATACCTTTCATGACTTAGGGAAGTATTCACTATTTTCATGTGGCTATTTTCAAA
CTAGGTATCAACCAGCAGCTTCAATAGTTCTGGCACTATTTTGAACCACTTTTTCACCCTCCTC
TCTTCAGTGTCTTTTCTTTCTATTCATGCAAATTATTCTTTAACAGTAATTACTGTCTTTTCTG
CAAAGAAACTGTTTTCTTTAGTTCCTGGAGTATCAGCACTTTAGACCGCAGATAATCCTGAAAA
AGGAGCAGACTACGAAGAAGACACTAATCATACTAGTGGCCTGTGTTAGTCACCAAGCATCATC
TCATCCTGCTTGCTTGTCTCGTAGTAGGTCATCAATATTTGTTTTATGAATAAAGTATGAATAA
AGGTAAGTCGTCAGTGCGTAAAAACCTGAGGCCTTCCACAATTTGAGTGTTCAATAGCACGTCT
CATTAACAGTTCATGAGCTAAACCTTTCATCTTGACTTTCGGAATAGAATGAAATTCTACGCAA
GCCTTCCCCAGTCAATCTGCCCTCGCGGCAATGGCTGAGGATGTGCTGTCATTCCATTTAAAAG
CATCTTTTTCCTCCTCTTGAGAGCAATGATTGCCCCTGCAGTAGACCACACTGCCCCCCACTTC
CGCTGCCTGTCGTCCCCACGGGTTCCAGACCTCAACCCGGTCCGTCACAGAACCGCGCGTAAAT
CCGCCCTCTCCTCCGACCCCCGCCGCCTTCGCCAGCTTCCGTCTAGCTCGCTTTTGGGACAAGT
GATGCAAAGGAGCTCTGCTTCCGCGTCGGCGACGGCGTGGGCAGTGACGTCACTGCGCTCTGAC
GTCAGGACAACGTGCAGTGCGGTCGCCCGGGAGACCGGGGAAGCCGTTTTACACCCAGCGGAGT
CCCGGGCTAGCCTGTTTTTCTGCAGTGCTCTCTCAGTGCGATTAGAGGAGTCATGGATCGTCAC
ATTCCCATGCACGCCTTACCCAAAGAAATCCAACAGAGTTCAACATGCAAGCATGCAGTTAAAA
AAGCAACAAAATGAATTTCAGAGAGTACAGAAAGAATTAAGTCATCTACAACTTGAGTTAAAAA
TTAAACAAAAACAATCTCAAGTCTTCAGTCAAAGATTGTCAGAATACAAATACTTCTGGAATAA
GACTCTTTTATTACTTACTTTTACTAAAAGGGAACTAACAAGTATTAAATATGAAATAAATGAT
AATTTTCAAAACTGGACTTCACTGAAAGGAGAAGTGTTTCTACAAATTAAATCTATAAGTGATA
CAGCCTTGGCAGAGATAGATATGTTAAATAAGAGTCTGACAGTGTCTCAGAGAAATAAGGTAAG
CCTGGAAGAGGAAATGAAATGTCTCAAAGTGTTGTCGGATGCAGCCATATTGAGGTCTCAGCAG
ATGGAGGCGTCCAAGCAGCATGAAGTGAACCTGCAAGCCAGGTGCTACGAGCTGCAGAAGGAGG
CACTGGATTTACAGTGTCAAGTAGAGGCCCTTGGGCTGAGACTTCAGAAGACAGTGAAGGAGCT
GGACAACTGTAAAGAGATGCTCATGCACAAAAGGCTACTTAAAGAAAAAGAAGACTCTTTAATT
ACTTGTCAACAACTATATAAAACCGTACAGGAAGAGCTGACTACAAAAGGGAGACAAGAGGAAG
ATATAAAGCGAAGAATCAACCTTGCCGAAAATGAACTAGAGATGACCAAAACGCTCCTGCTTCA
GACACAGGAAGAAATTTTAACGCTGAAAAATGAAAGGGAATTGATGCTGGTTTCTCATCAGAAA
AGCATCGAGCAGCTGCAGGAAACCCTGAGACAGAAGCTGCTGAGCGATGACAGCTGGAGGGAGA
AGATTGAAGCTGAGCTCAGCAAGGAAAGAGCCCGGCATCGCATTGAGTTCCAGGACCAAGCTCT
TCTCTTTAAGGAGGAAGCTAAACTGGAACTTGACATTGAAAAAGAAAAGCACCAGGAAATAATC
CGGAAGTATCAGAAAGAACAAGAGGGCCTGCAGAGCAAGATAGCTGACCTAATCGCAGATGCTA
CAAAAGACCTGAGGCTGGAAGTGGCCTCTCTCCAAGAAAAACTCCATGAGTCCCATGCGCGGTA
CACAGAAGAGTCTGAGTCAAAGAAAAAAGAAATTGAAGACCTGAAAAATCTGGTTGCAGAATTG
GAGTGTCGTTTGAAGGAGGAAACTGGCCATGATGATTCAGTTTCCAAAGAGTTGAAGAAGGAAA
TGAAACAGAAGTCAGATGAGCTGGAAAGAGTAAGGCTGGCCCAGACACAGCTGCTGCAGCAGTT
CAGCCAGTCACAGGAAGAGAACACTTTTCTCCAGGAAACAGTGCGCAGAGAGTGTGAAGAACGC
TTTGAACTGACAGAGGCTTTGAGTCAAGCCAAAGAACAGCTCCTGGAGCTTAAGAGGAGCGGAG
GAAGCTTACGGTGTTCCCTCAATAAGGGTGCCCTAACCCACCCTGTCTCGGCAGTCAGTAATCA
CCGCGAGCTAAGCAATGTGAGACACAACTGTGGACGAGGCACCAGCTCGGCCAGCCTGCGCGGA
CTGCCAAAACCCACCGCAACCCCAACCCCAGATAAACTCAAGAAGGTCGACAGCTCCGGACTGC
CTGCCCTTTCCCAGGCATATCCTCCCAGGGGCCGAGCAATTTCAGTAACCGAGGCCAGGCAGAG
GTTGACAGCCATCATTCGCAGGAGGCTGAGTCAGCAGCGATGACCTGCTTGGGAGGGTTCCACC
CTCGGTGTATACCCCCTTGCACAGCAAGGCAGTGACTCACTGTAACCGGGTGCCAGGAAACAAA
CATGTACGAAGCTAGAACTGTGAAGACACAGTTTTCAAAGGGCCTCAGAGACTGCAACAGATAA
TGAAGCTGGTACTCCAGAGATCTGACTTCTACGTTCATGTATATATTTTATACTCTTCAAATCT
GGCCCTTAGAGACCACAGGGAAAAACTTCTCATCCTGGCGAGTTTTTCTCTTCCTCCCTCACTT
CCTGTCTTCCATCCCCCACCCTTCCTCTCCTTTTTCTACCATAGCAAGTAGCATATCGACACAA
AATAGATTATATTGGCTTTATAGCATTTTTTCATTTGTTTATTGAACTAAATAGATGTAAGCAT
TCCAACTAGAAAAAGAAAGTCCTTAATTGATTTCCAAAGTCCTTATAATATTTACAGAGCTAAT
AATCATCTTCAAATGCTCAGCGTACCTGGTTATCTGACTGCTTTGTAGACTGGGTCAAAAGTAA
GGATAGCCTTTTAGAAGACTATCTGCTGTGGGTCTCGGACCTCGTACAAAAGACAGTGATTCCC
ATTCAAGGAAAAGTAGTTTGAATCTCTAATTATGAATATCACTTTAGAAAACGACATGACCATG
AAAATACATCTTAGTGCATATTTCTGCATTGAATACTTTTTGGTACACAGCTGAGTTCTATTGA
ACTTGTATTTTCCAGCCATGGGGAAGAGAACTAACACAAGGTCACTTAGTAAAAAAAAATACAA
GGCTAATTTGGATTCAAAATTGATTACCCTTGAAAGTGTCTAACTGATTAACAGTTTCTATTCT
CAGTGTGAGAATGTAAAACAAGATACGCTATTTAAAGTTACCAAGCTCTGGCTCATGTAGCTGA
TCTTACCTCCAGCAACCATTCATCTGTCTTTTCTCCATCTGATAGGACTGTATTTGTCTTTATA
ATGGGGGAGGGGGACCAAATCTGATATATCATGGACATTAAACTTTCCTCGTCTCATATAGGAA
TACTAGTAACTTGTGATTATAGCACATTTAATTATCTATTTGGCTGCAGTGTTGATGAGAGAAA
ACAGTGGTTCTAGCATCCTAACCATGGCATAAAAGAGTGACATCACTAAACAAAACCACAGTTA
TCTCCGTCTTTTTAAGACTTATAAACCGCTTTAACCTTAAAATGATTCCACATTAGCTCCCTGG
CTACTTTAGGTAAGATATCTCTGTGTTAAGGATTAGGATGCTGTCCGTTGTTTACAGAGGGGCC
ATTCTTCATAATGGCTTTGCACGAGAGAGCACAAACTACAGAAGAGTGGCTCAAGGATTGCCCT
CGCCCTCTCCACAGATAAGAAGCAGACGAAAAGCATGTTACTTGGCTAAAGGAGTATACTTAGA
GACAGAGTCGAACCAGGACCACTGTCACTTAATCCCAGTCTCTCCAACCTTAAAAGCTTCCCAG
GCTCCACCATGACTGTTGTCAACAGCACCCACACTGTAGTTAATTAACATTGTTTCCTCCTTAA
GTGCACCGACTTTTGAAACTTGAGTTGTATAAGAAGGAAATTGATTCAGGGAAGAGTAATGATA
AAGTAACAAATGTCCTTTGCTAATTATACTTTTCTAGAGAACTCTAAGTGTGCATCTATTAAAA
CAAGAAATGTTAA

hide sequence

RefSeq Acc Id:

XM_039102616 ⟹ XP_038958544

RefSeq Status:

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	2	149,891,142 - 150,061,167 (+)	NCBI

RefSeq Acc Id:

XM_039102617 ⟹ XP_038958545

RefSeq Status:

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	2	149,943,425 - 150,061,167 (+)	NCBI

RefSeq Acc Id:

XM_039102618 ⟹ XP_038958546

RefSeq Status:

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	2	149,889,618 - 150,035,410 (+)	NCBI

RefSeq Acc Id:

XM_039102619 ⟹ XP_038958547

RefSeq Status:

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	2	149,889,619 - 150,035,410 (+)	NCBI

RefSeq Acc Id:

XM_039102620 ⟹ XP_038958548

RefSeq Status:

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	2	149,889,615 - 150,004,079 (+)	NCBI

RefSeq Acc Id:

XM_039102621 ⟹ XP_038958549

RefSeq Status:

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	2	149,889,616 - 150,004,079 (+)	NCBI

Protein Sequences


Protein RefSeqs	NP_001108501	(Get FASTA)	NCBI Sequence Viewer
	XP_006232534	(Get FASTA)	NCBI Sequence Viewer
	XP_006232535	(Get FASTA)	NCBI Sequence Viewer
	XP_006232536	(Get FASTA)	NCBI Sequence Viewer
	XP_006232537	(Get FASTA)	NCBI Sequence Viewer
	XP_017446456	(Get FASTA)	NCBI Sequence Viewer
	XP_038958544	(Get FASTA)	NCBI Sequence Viewer
	XP_038958545	(Get FASTA)	NCBI Sequence Viewer
	XP_038958546	(Get FASTA)	NCBI Sequence Viewer
	XP_038958547	(Get FASTA)	NCBI Sequence Viewer
	XP_038958548	(Get FASTA)	NCBI Sequence Viewer
	XP_038958549	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAI58628	(Get FASTA)	NCBI Sequence Viewer

Reference Sequences

RefSeq Acc Id:

NP_001108501 ⟸ NM_001115029

- UniProtKB:

B0BMZ8 (UniProtKB/TrEMBL), F1M8S9 (UniProtKB/TrEMBL), A0A8I6A518 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MDRHIPMHALPKEIQQMSPEETVCKYCGVSYLILHEFKAMEEKLKAVQEELKFYQGSIEREKRL
QEKLQSLSQEFEKYKTDSESKKERVQHASMQLKKQQNEFQRVQKELSHLQLELKIKQKQSQVFS
QRLSEYKYFWNKTLLLLTFTKRELTSIKYEINDNFQNWTSLKGEVFLQIKSISDTALAEIDMLN
KSLTVSQRNKVSLEEEMKCLKVLSDAAILRSQQMEASKQHEVNLQARCYELQKEALDLQCQVEA
LGLRLQKTVKELDNCKEMLMKKSNDANNCERELRKLKFESIISESRHKRLLKEKEDSLITCQQL
YKTVQEELTTKGRQEEDIKRRINLAENELEMTKTLLLQTQEEILTLKNERELMLVSHQKSIEQL
QETLRQKLLSDDSWREKIEAELSKERARHRIEFQDQALLFKEEAKLELDIEKEKHQEIIRKYQK
EQEGLQSKIADLIADATKDLRLEVASLQEKLHESHARYTEESESKKKEIEDLKNLVAELECRLK
EETGHDDSVSKELKKEMKQKSDELERVRLAQTQLLQQFSQSQEENTFLQETVRRECEERFELTE
ALSQAKEQLLELKRSGGSLRCSLNKGALTHPVSAVSNHRELSNVRHNCGRGTSSASLRGLPKPT
ATPTPDKLKKVDSSGLPALSQAYPPRGRAISVTEARQRLTAIIRRRLSQQR

hide sequence

RefSeq Acc Id:

XP_006232534 ⟸ XM_006232472

- Peptide Label:

isoform X1

- Sequence:

show sequence

MIAPAVDHTAPHFRCLSSPRVPDLNPVRHRTARKSALSSDPRRLRQLPSSSLLGQVMQRSSASA
SATAWAVTSLRSDVRTTCSAVARETGEAVLHPAESRASLFFCSALSVRLEESWIVTFPCTPYPK
KSNRVQHASMQLKKQQNEFQRVQKELSHLQLELKIKQKQSQVFSQRLSEYKYFWNKTLLLLTFT
KRELTSIKYEINDNFQNWTSLKGEVFLQIKSISDTALAEIDMLNKSLTVSQRNKVSLEEEMKCL
KVLSDAAILRSQQMEASKQHEVNLQARCYELQKEALDLQCQVEALGLRLQKTVKELDNCKEMLM
KKSNDANNCERELRKLKFESIISESRHKRLLKEKEDSLITCQQLYKTVQEELTTKGRQEEDIKR
RINLAENELEMTKTLLLQTQEEILTLKNERELMLVSHQKSIEQLQETLRQKLLSDDSWREKIEA
ELSKERARHRIEFQDQALLFKEEAKLELDIEKEKHQEIIRKYQKEQEGLQSKIADLIADATKDL
RLEVASLQEKLHESHARYTEESESKKKEIEDLKNLVAELECRLKEETGHDDSVSKELKKEMKQK
SDELERVRLAQTQLLQQFSQSQEENTFLQETVRRECEERFELTEALSQAKEQLLELKRSGGSLR
CSLNKGALTHPVSAVSNHRELSNVRHNCGRGTSSASLRGLPKPTATPTPDKLKKVDSSGLPALS
QAYPPRGRAISVTEARQRLTAIIRRRLSQQR

hide sequence

RefSeq Acc Id:	XP_006232535 ⟸ XM_006232473
- Peptide Label:	isoform X3
- UniProtKB:	F1M8S9 (UniProtKB/TrEMBL), A0A8I6A518 (UniProtKB/TrEMBL)
- Sequence:	show sequence MDRHIPMHALPKEIQQMSPEETVCKYCGVSYLILHEFKAMEEKLKAVQEELKFYQGSIEREKRL QEKLQSLSQEFEKYKTDSESKKERVQHASMQLKKQQNEFQRVQKELSHLQLELKIKQKQSQVFS QRLSEYKYFWNKTLLLLTFTKRELTSIKYEINDNFQNWTSLKGEVFLQIKSISDTALAEIDMLN KSLTVSQRNKVSLEEEMKCLKVLSDAAILRSQQMEASKQHEVNLQARCYELQKEALDLQCQVEA LGLRLQKTVKELDNCKEMLMKKSNDANNCERELRKLKFESIISESRHKRLLKEKEDSLITCQQL YKTVQEELTTKGRQEEDIKRRINLAENELEMTKTLLLQTQEEILTLKNERELMLVSHQKSIEQL QETLRQKLLSDDSWREKIEAELSKERARHRIEFQDQALLFKEEAKLELDIEKEKHQEIIRKYQK EQEGLQSKIADLIADATKDLRLEVASLQEKLHESHARYTEESESKKKEIEDLKNLVAELECRLK EETGHDDSVSKELKKEMKQKSDELERVRLAQTQLLQQFSQSQEENTFLQETVRRECEERFELTE ALSQAKEQLLELKRSGGSLRCSLNKGALTHPVSAVSNHRELSNVRHNCGRGTSSASLRGLPKPT ATPTPDKLKKVDSSGLPALSQAYPPRGRAISVTEARQRLTAIIRRRLSQQR hide sequence

RefSeq Acc Id:

XP_006232536 ⟸ XM_006232474

- Peptide Label:

isoform X4

- Sequence:

show sequence

MSPEETVCKYCGVSYLILHEFKAMEEKLKAVQEELKFYQGSIEREKRLQEKLQSLSQEFEKYKT
DSESKKERVQHASMQLKKQQNEFQRVQKELSHLQLELKIKQKQSQVFSQRLSEYKYFWNKTLLL
LTFTKRELTSIKYEINDNFQNWTSLKGEVFLQIKSISDTALAEIDMLNKSLTVSQRNKVSLEEE
MKCLKVLSDAAILRSQQMEASKQHEVNLQARCYELQKEALDLQCQVEALGLRLQKTVKELDNCK
EMLMKKSNDANNCERELRKLKFESIISESRHKRLLKEKEDSLITCQQLYKTVQEELTTKGRQEE
DIKRRINLAENELEMTKTLLLQTQEEILTLKNERELMLVSHQKSIEQLQETLRQKLLSDDSWRE
KIEAELSKERARHRIEFQDQALLFKEEAKLELDIEKEKHQEIIRKYQKEQEGLQSKIADLIADA
TKDLRLEVASLQEKLHESHARYTEESESKKKEIEDLKNLVAELECRLKEETGHDDSVSKELKKE
MKQKSDELERVRLAQTQLLQQFSQSQEENTFLQETVRRECEERFELTEALSQAKEQLLELKRSG
GSLRCSLNKGALTHPVSAVSNHRELSNVRHNCGRGTSSASLRGLPKPTATPTPDKLKKVDSSGL
PALSQAYPPRGRAISVTEARQRLTAIIRRRLSQQR

hide sequence

RefSeq Acc Id:

XP_006232537 ⟸ XM_006232475

- Peptide Label:

isoform X4

- Sequence:

show sequence

MSPEETVCKYCGVSYLILHEFKAMEEKLKAVQEELKFYQGSIEREKRLQEKLQSLSQEFEKYKT
DSESKKERVQHASMQLKKQQNEFQRVQKELSHLQLELKIKQKQSQVFSQRLSEYKYFWNKTLLL
LTFTKRELTSIKYEINDNFQNWTSLKGEVFLQIKSISDTALAEIDMLNKSLTVSQRNKVSLEEE
MKCLKVLSDAAILRSQQMEASKQHEVNLQARCYELQKEALDLQCQVEALGLRLQKTVKELDNCK
EMLMKKSNDANNCERELRKLKFESIISESRHKRLLKEKEDSLITCQQLYKTVQEELTTKGRQEE
DIKRRINLAENELEMTKTLLLQTQEEILTLKNERELMLVSHQKSIEQLQETLRQKLLSDDSWRE
KIEAELSKERARHRIEFQDQALLFKEEAKLELDIEKEKHQEIIRKYQKEQEGLQSKIADLIADA
TKDLRLEVASLQEKLHESHARYTEESESKKKEIEDLKNLVAELECRLKEETGHDDSVSKELKKE
MKQKSDELERVRLAQTQLLQQFSQSQEENTFLQETVRRECEERFELTEALSQAKEQLLELKRSG
GSLRCSLNKGALTHPVSAVSNHRELSNVRHNCGRGTSSASLRGLPKPTATPTPDKLKKVDSSGL
PALSQAYPPRGRAISVTEARQRLTAIIRRRLSQQR

hide sequence

RefSeq Acc Id:

XP_017446456 ⟸ XM_017590967

- Peptide Label:

isoform X2

- Sequence:

show sequence

MIAPAVDHTAPHFRCLSSPRVPDLNPVRHRTARKSALSSDPRRLRQLPSSSLLGQVMQRSSASA
SATAWAVTSLRSDVRTTCSAVARETGEAVLHPAESRASLFFCSALSVRLEESWIVTFPCTPYPK
KSNRVQHASMQLKKQQNEFQRVQKELSHLQLELKIKQKQSQVFSQRLSEYKYFWNKTLLLLTFT
KRELTSIKYEINDNFQNWTSLKGEVFLQIKSISDTALAEIDMLNKSLTVSQRNKVSLEEEMKCL
KVLSDAAILRSQQMEASKQHEVNLQARCYELQKEALDLQCQVEALGLRLQKTVKELDNCKEMLM
HKRLLKEKEDSLITCQQLYKTVQEELTTKGRQEEDIKRRINLAENELEMTKTLLLQTQEEILTL
KNERELMLVSHQKSIEQLQETLRQKLLSDDSWREKIEAELSKERARHRIEFQDQALLFKEEAKL
ELDIEKEKHQEIIRKYQKEQEGLQSKIADLIADATKDLRLEVASLQEKLHESHARYTEESESKK
KEIEDLKNLVAELECRLKEETGHDDSVSKELKKEMKQKSDELERVRLAQTQLLQQFSQSQEENT
FLQETVRRECEERFELTEALSQAKEQLLELKRSGGSLRCSLNKGALTHPVSAVSNHRELSNVRH
NCGRGTSSASLRGLPKPTATPTPDKLKKVDSSGLPALSQAYPPRGRAISVTEARQRLTAIIRRR
LSQQR

hide sequence

RefSeq Acc Id:

ENSRNOP00000040531 ⟸ ENSRNOT00000051494

RefSeq Acc Id:	XP_038958548 ⟸ XM_039102620
- Peptide Label:	isoform X8

RefSeq Acc Id:	XP_038958549 ⟸ XM_039102621
- Peptide Label:	isoform X9

RefSeq Acc Id:	XP_038958546 ⟸ XM_039102618
- Peptide Label:	isoform X6

RefSeq Acc Id:	XP_038958547 ⟸ XM_039102619
- Peptide Label:	isoform X7

RefSeq Acc Id:	XP_038958544 ⟸ XM_039102616
- Peptide Label:	isoform X5

RefSeq Acc Id:	XP_038958545 ⟸ XM_039102617
- Peptide Label:	isoform X5

RefSeq Acc Id:

ENSRNOP00000088793 ⟸ ENSRNOT00000109693

RefSeq Acc Id:

ENSRNOP00000087054 ⟸ ENSRNOT00000098221

RefSeq Acc Id:

ENSRNOP00000091894 ⟸ ENSRNOT00000094805

RefSeq Acc Id:

ENSRNOP00000078646 ⟸ ENSRNOT00000118137

RefSeq Acc Id:

ENSRNOP00000086081 ⟸ ENSRNOT00000110326

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-F1M8S9-F1-model_v2	AlphaFold	F1M8S9	1-691	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Promoters

RGD ID:

13691361

Promoter ID:

EPDNEW_R1885

Type:

initiation region

Name:

Lekr1_1

Description:

leucine, glutamate and lysine rich 1

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0	2	157,453,429 - 157,453,489	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1565425	AgrOrtholog
BioCyc Gene	G2FUF-52885	BioCyc
Ensembl Genes	ENSRNOG00000031247	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Protein	ENSRNOP00000040531.5	UniProtKB/TrEMBL
	ENSRNOP00000078646.1	UniProtKB/TrEMBL
	ENSRNOP00000086081.1	UniProtKB/TrEMBL
	ENSRNOP00000087054	ENTREZGENE
	ENSRNOP00000087054.1	UniProtKB/TrEMBL
	ENSRNOP00000088793.1	UniProtKB/TrEMBL
	ENSRNOP00000091894.1	UniProtKB/TrEMBL
Ensembl Transcript	ENSRNOT00000051494.5	UniProtKB/TrEMBL
	ENSRNOT00000094805.1	UniProtKB/TrEMBL
	ENSRNOT00000098221	ENTREZGENE
	ENSRNOT00000098221.1	UniProtKB/TrEMBL
	ENSRNOT00000109693.1	UniProtKB/TrEMBL
	ENSRNOT00000110326.1	UniProtKB/TrEMBL
	ENSRNOT00000118137.1	UniProtKB/TrEMBL
IMAGE_CLONE	IMAGE:7455378	IMAGE-MGC_LOAD
InterPro	LEKR1	UniProtKB/TrEMBL
KEGG Report	rno:361953	UniProtKB/TrEMBL
MGC_CLONE	MGC:187532	IMAGE-MGC_LOAD
NCBI Gene	361953	ENTREZGENE
PANTHER	LEUCINE, GLUTAMATE AND LYSINE-RICH 1	UniProtKB/TrEMBL
	PTHR34251	UniProtKB/TrEMBL
PhenoGen	Lekr1	PhenoGen
UniProt	A0A8I5ZLP1_RAT	UniProtKB/TrEMBL
	A0A8I6A518	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I6A536_RAT	UniProtKB/TrEMBL
	A0A8I6A8J1_RAT	UniProtKB/TrEMBL
	A0A8I6GJB5_RAT	UniProtKB/TrEMBL
	B0BMZ8	ENTREZGENE, UniProtKB/TrEMBL
	F1M8S9	ENTREZGENE, UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2015-07-29	Lekr1	leucine, glutamate and lysine rich 1	LOC691104	hypothetical protein LOC691104	Data Merged	737654	PROVISIONAL
2010-05-25	Lekr1	leucine, glutamate and lysine rich 1	RGD1565425	similar to Restin	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2008-04-30	RGD1565425	similar to Restin	RGD1565425_predicted	similar to Restin (predicted)	'predicted' is removed	2292626	APPROVED
2008-01-09	LOC691104	hypothetical protein LOC691104	LOC683159	hypothetical protein LOC683159	Data Merged	1643240	APPROVED
2006-11-20	LOC683159	hypothetical protein LOC683159			Symbol and Name status set to provisional	70820	PROVISIONAL
2006-11-19	LOC691104	hypothetical protein LOC691104			Symbol and Name status set to provisional	70820	PROVISIONAL
2006-03-07	RGD1565425_predicted	similar to Restin (predicted)	LOC361953	similar to Restin	Symbol and Name status set to approved	1299863	APPROVED
2006-02-09	LOC361953	similar to Restin			Symbol and Name status set to provisional	70820	PROVISIONAL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - ClinVar