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Gene: Shroom2 (shroom family member 2) Rattus norvegicus

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Symbol:

Shroom2

Name:

shroom family member 2

RGD ID:

1565163

Description:

Predicted to enable actin filament binding activity; beta-catenin binding activity; and protein domain specific binding activity. Predicted to be involved in actin filament organization; cell migration; and melanosome organization. Predicted to act upstream of or within cell-cell junction maintenance and negative regulation of actin filament depolymerization. Predicted to be located in several cellular components, including bicellular tight junction; cell cortex; and neuronal cell body. Predicted to be active in several cellular components, including adherens junction; apical junction complex; and apical plasma membrane. Orthologous to human SHROOM2 (shroom family member 2); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 2,3,7,8-Tetrachlorodibenzofuran; 3,3',4,4',5-pentachlorobiphenyl.

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

Ab2-404; apical protein-like; apical protein-like (Xenopus laevis); Apxl; liver regeneration-related protein LRRG167; LOC317435; similar to apical protein, Xenopus laevis-like

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	SHROOM2 (shroom family member 2)	HGNC	EggNOG, Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, OrthoMCL, Panther, Treefam
Mus musculus (house mouse):	Shroom2 (shroom family member 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Shroom2 (shroom family member 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	SHROOM2 (shroom family member 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	SHROOM2 (shroom family member 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Shroom2 (shroom family member 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	SHROOM2 (shroom family member 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	SHROOM2 (shroom family member 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Shroom2 (shroom family member 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Alliance orthologs ³
Homo sapiens (human):	SHROOM2 (shroom family member 2)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Mus musculus (house mouse):	Shroom2 (shroom family member 2)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	shroom2b (shroom family member 2b)	Alliance	DIOPT (Ensembl Compara\|InParanoid\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	shroom2a (shroom family member 2a)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	shroom2a (shroom family member 2a)	Alliance	DIOPT (Ensembl Compara\|OrthoFinder\|PhylomeDB)
Drosophila melanogaster (fruit fly):	Shroom	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|OrthoFinder\|OrthoInspector\|PANTHER)
Drosophila melanogaster (fruit fly):	Shroom	Alliance	DIOPT (Ensembl Compara\|OrthoFinder\|OrthoInspector\|PANTHER)
Xenopus tropicalis (tropical clawed frog):	shroom2	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	X	25,308,163 - 25,480,194 (-)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	X	25,308,163 - 25,479,385 (-)	Ensembl				GRCr8
mRatBN7.2	X	21,812,469 - 21,983,724 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	X	21,812,469 - 21,984,153 (-)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	X	22,717,791 - 22,888,882 (-)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	X	26,138,766 - 26,309,855 (-)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	X	22,394,408 - 22,565,439 (-)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	X	23,478,869 - 23,649,424 (-)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	X	23,478,871 - 23,649,466 (-)	Ensembl			rn6	Rnor6.0
Rnor_5.0	X	23,895,809 - 24,066,198 (-)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	X	42,290,709 - 42,462,067 (-)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	X	22,219,215 - 22,383,703 (-)	NCBI		Celera
Cytogenetic Map	X	q13	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

autistic disorder (ISO)

Meniere's disease (ISO)

Neurodevelopmental Disorders (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

(1->4)-beta-D-glucan (ISO)

1,2-dimethylhydrazine (ISO)

2,3,7,8-tetrachlorodibenzodioxine (EXP,ISO)

2,3,7,8-Tetrachlorodibenzofuran (EXP)

2-palmitoylglycerol (ISO)

3,3',4,4',5-pentachlorobiphenyl (EXP)

3,3',5,5'-tetrabromobisphenol A (ISO)

4,4'-sulfonyldiphenol (EXP)

4-hydroxyphenyl retinamide (ISO)

6-propyl-2-thiouracil (EXP)

acetamide (EXP)

acrylamide (EXP)

afimoxifene (ISO)

aflatoxin B1 (ISO)

Aflatoxin B2 alpha (ISO)

ammonium chloride (EXP)

aristolochic acid A (ISO)

arsenite(3-) (ISO)

benzo[a]pyrene (ISO)

benzo[a]pyrene diol epoxide I (ISO)

benzo[e]pyrene (ISO)

bisphenol A (EXP,ISO)

bisphenol F (EXP,ISO)

cadmium dichloride (ISO)

caffeine (ISO)

calcitriol (ISO)

carbon nanotube (ISO)

CGP 52608 (ISO)

chloroprene (ISO)

copper(II) sulfate (ISO)

crocidolite asbestos (ISO)

dicrotophos (ISO)

endosulfan (EXP)

ethanol (ISO)

FR900359 (ISO)

fulvestrant (ISO)

gentamycin (EXP)

inulin (ISO)

isoprenaline (ISO)

ketoconazole (EXP)

lipopolysaccharide (ISO)

methapyrilene (ISO)

paracetamol (EXP)

perfluorooctane-1-sulfonic acid (ISO)

pirinixic acid (ISO)

poly(I:C) (EXP)

propanal (ISO)

S-(1,2-dichlorovinyl)-L-cysteine (ISO)

sevoflurane (ISO)

silicon dioxide (ISO)

sodium arsenite (ISO)

Soman (EXP)

sunitinib (ISO)

testosterone (ISO)

tetrachloromethane (ISO)

thiram (ISO)

titanium dioxide (ISO)

trichloroethene (EXP)

triptonide (ISO)

troglitazone (ISO)

urethane (ISO)

valproic acid (ISO)

vinclozolin (EXP)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

actin filament bundle assembly (ISO)

actin filament organization (IBA)

cell migration (ISO,ISS)

cell morphogenesis (ISO)

cell-cell junction maintenance (ISO)

melanosome organization (ISO,ISS)

negative regulation of actin filament depolymerization (ISO)

Cellular Component

adherens junction (IBA,ISO)

anchoring junction (IEA)

apical junction complex (IBA,ISO)

apical plasma membrane (IBA,IEA,ISO)

bicellular tight junction (IEA,ISO,ISS)

cell cortex (ISO)

cell-cell junction (ISO)

cortical actin cytoskeleton (IBA,ISO)

cytoplasm (IEA,ISO)

cytoskeleton (IEA,ISO,ISS)

membrane (IEA)

microtubule (IEA)

neuronal cell body (ISO)

plasma membrane (IEA,ISO,ISS)

Molecular Function

actin binding (IEA,ISO,ISS)

actin filament binding (IBA,IEA,ISO)

beta-catenin binding (ISO)

protein binding (ISO)

protein domain specific binding (ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2.	GOA pipeline	RGD automated data pipeline
3.	ClinVar Automated Import and Annotation Pipeline	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
4.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

Additional References at PubMed

PMID:12477932	PMID:16684770	PMID:16987870	PMID:17666436	PMID:19056867	PMID:28131823

Genomics

Comparative Map Data

Shroom2
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	X	25,308,163 - 25,480,194 (-)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	X	25,308,163 - 25,479,385 (-)	Ensembl				GRCr8
mRatBN7.2	X	21,812,469 - 21,983,724 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	X	21,812,469 - 21,984,153 (-)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	X	22,717,791 - 22,888,882 (-)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	X	26,138,766 - 26,309,855 (-)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	X	22,394,408 - 22,565,439 (-)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	X	23,478,869 - 23,649,424 (-)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	X	23,478,871 - 23,649,466 (-)	Ensembl			rn6	Rnor6.0
Rnor_5.0	X	23,895,809 - 24,066,198 (-)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	X	42,290,709 - 42,462,067 (-)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	X	22,219,215 - 22,383,703 (-)	NCBI		Celera
Cytogenetic Map	X	q13	NCBI

SHROOM2
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	X	9,786,429 - 9,949,443 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	X	9,786,429 - 9,949,443 (+)	Ensembl			hg38	GRCh38
GRCh37	X	9,754,469 - 9,917,483 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	X	9,714,496 - 9,877,481 (+)	NCBI	Build 36	Build 36	hg18	NCBI36
Build 34	X	9,564,231 - 9,727,217	NCBI
Celera	X	13,926,415 - 14,088,764 (+)	NCBI		Celera
Cytogenetic Map	X	p22.2	NCBI
HuRef	X	7,649,792 - 7,749,592 (+)	NCBI		HuRef
CHM1_1	X	9,784,898 - 9,947,901 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	X	9,369,053 - 9,532,050 (+)	NCBI		T2T-CHM13v2.0

Shroom2
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	X	151,392,505 - 151,553,784 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	X	151,392,505 - 151,552,461 (-)	Ensembl		GRCm39 Ensembl		GRCm39
GRCm38	X	152,609,509 - 152,770,788 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	X	152,609,509 - 152,769,465 (-)	Ensembl			mm10	GRCm38
MGSCv37	X	149,044,052 - 149,204,004 (-)	NCBI	MGSCv37	MGSCv37	mm9	NCBIm37
MGSCv36	X	147,950,225 - 148,110,177 (-)	NCBI		MGSCv36	mm8
Celera	X	136,481,951 - 136,643,123 (+)	NCBI		Celera
Cytogenetic Map	X	F3	NCBI
cM Map	X	68.46	NCBI

Shroom2
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955499	8,031,615 - 8,100,952 (+)	Ensembl
ChiLan1.0	NW_004955499	8,031,961 - 8,103,307 (+)	NCBI	ChiLan1.0	ChiLan1.0

SHROOM2
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	X	11,589,946 - 11,751,915 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	X	11,593,613 - 11,755,582 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	X	2,418,883 - 2,580,853 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	X	9,673,879 - 9,832,733 (+)	NCBI	PanPan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	X	9,755,524 - 9,832,733 (+)	Ensembl			panPan2	panpan1.1

SHROOM2
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	X	6,499,570 - 6,642,738 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	X	6,499,354 - 6,641,946 (+)	Ensembl			canFam3	CanFam3.1
Dog10K_Boxer_Tasha	X	6,454,916 - 6,598,952 (+)	NCBI	Dog10K_Boxer_Tasha	Dog10K_Boxer_Tasha
ROS_Cfam_1.0	X	6,445,261 - 6,589,721 (+)	NCBI	ROS_Cfam_1.0	ROS_Cfam_1.0
UMICH_Zoey_3.1	X	6,436,580 - 6,580,045 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	X	6,472,007 - 6,615,248 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	X	6,462,126 - 6,605,626 (+)	NCBI	UU_Cfam_GSD_1.0	UU_Cfam_GSD_1.0

Shroom2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404953	4,249,252 - 4,334,127 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936644	42,581 - 127,531 (-)	Ensembl		SpeTri2.0 Ensembl
SpeTri2.0	NW_004936644	42,620 - 127,481 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

SHROOM2
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	X	6,296,219 - 6,448,992 (+)	Ensembl			susScr11	Sscrofa11.1
Sscrofa11.1	X	6,296,212 - 6,450,401 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa11.1	Y	4,753,733 - 4,785,766 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	X	6,699,136 - 6,801,756 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

SHROOM2
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	X	8,242,714 - 8,405,051 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	X	8,345,056 - 8,405,552 (+)	Ensembl		ChlSab1.1 Ensembl	chlSab2	Vervet-AGM
Vero_WHO_p1.0	NW_023666056	9,916,285 - 10,080,497 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Shroom2
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla 1.0	NW_004624834	7,329,651 - 7,504,960 (+)	NCBI	HetGla 1.0	HetGla 1.0	hetGla2

Variants

Variants in Shroom2
1024 total Variants

miRNA Target Status (No longer updated)

Predicted Target Of

	Summary Value
Count of predictions:	698
Count of miRNA genes:	314
Interacting mature miRNAs:	416
Transcripts:	ENSRNOT00000050819, ENSRNOT00000059431
Prediction methods:	Miranda, Pita, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCr8)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
1598873	Memor2	Memory QTL 2	2.5		exploratory behavior trait (VT:0010471)	average horizontal distance between subject and target during voluntary locomotion in an experimental apparatus (CMO:0002674)	X	24470360	44931007	Rat
70165	Bp64	Blood pressure QTL 64	5.2		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	X	4001493	44939387	Rat
2290375	Gluco34	Glucose level QTL 34	2.75		blood glucose amount (VT:0000188)	blood glucose level area under curve (AUC) (CMO:0000350)	X	24470360	45082063	Rat
731181	Uae27	Urinary albumin excretion QTL 27	2.7	0.0059	urine albumin amount (VT:0002871)	urine albumin excretion rate (CMO:0000757)	X	1970440	46970440	Rat
631666	Iddm5	Insulin dependent diabetes mellitus QTL 5			blood glucose amount (VT:0000188)	plasma glucose level (CMO:0000042)	X	8111486	53111486	Rat

Markers in Region

DXRat84

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	X	21,940,546 - 21,940,694 (+)	MAPPER	mRatBN7.2
Rnor_6.0	X	23,606,760 - 23,606,907	NCBI	Rnor6.0
Rnor_5.0	X	24,023,403 - 24,023,550	UniSTS	Rnor5.0
RGSC_v3.4	X	42,418,861 - 42,419,244	RGD	RGSC3.4
RGSC_v3.4	X	42,418,908 - 42,419,055	UniSTS	RGSC3.4
Celera	X	22,340,970 - 22,341,117	UniSTS
RGSC_v3.1	X	42,472,330 - 42,472,713	RGD
RH 2.0 Map	21	250.5	RGD
SHRSP x BN Map	X	6.8999	RGD
Cytogenetic Map	X	q21	UniSTS

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	sensory system	visual system
16	12	67	164	91	90	59	53	59	6	317	153	11	143	81	92	31	17	17

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001047893	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001434184	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001434185	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001434186	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001434187	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001434188	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001434189	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001434190	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006256816	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006256817	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008773126	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008773127	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008773128	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008773129	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008773130	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008773131	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AF348365	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AY325213	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC085701	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CB586797	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH474014	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ211812	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000021	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000050819 ⟹ ENSRNOP00000042259

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	X	25,308,163 - 25,358,638 (-)	Ensembl
mRatBN7.2 Ensembl	X	21,812,469 - 21,862,949 (-)	Ensembl
Rnor_6.0 Ensembl	X	23,481,380 - 23,530,003 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000059431 ⟹ ENSRNOP00000056187

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	X	25,308,163 - 25,478,706 (-)	Ensembl
mRatBN7.2 Ensembl	X	21,812,469 - 21,984,153 (-)	Ensembl
Rnor_6.0 Ensembl	X	23,478,871 - 23,649,466 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000104025 ⟹ ENSRNOP00000083830

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	X	25,308,163 - 25,479,385 (-)	Ensembl
mRatBN7.2 Ensembl	X	21,812,469 - 21,984,153 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000117197 ⟹ ENSRNOP00000092823

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	X	25,308,163 - 25,354,485 (-)	Ensembl
mRatBN7.2 Ensembl	X	21,812,469 - 21,858,795 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000122384 ⟹ ENSRNOP00000105757

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	X	25,308,163 - 25,479,385 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000161671 ⟹ ENSRNOP00000112703

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	X	25,308,163 - 25,392,285 (-)	Ensembl

RefSeq Acc Id:

NM_001047893 ⟹ NP_001041358

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	X	25,308,163 - 25,479,186 (-)	NCBI
mRatBN7.2	X	21,812,469 - 21,983,499 (-)	NCBI
Rnor_6.0	X	23,478,869 - 23,649,330 (-)	NCBI
Rnor_5.0	X	23,895,809 - 24,066,198 (-)	NCBI
RGSC_v3.4	X	42,290,709 - 42,462,067 (-)	RGD
Celera	X	22,219,215 - 22,383,703 (-)	RGD

Sequence:

show sequence

ATGGAGGGCGCCGAGCCCCGTGCACGGCCCGAGCGCTTGGCTGAAGCTGAGGCGCGGGCGACCG
ACGGCGTCCGTCTGGTGGAGGTGCAGCTGAGCGGCGGTGCCCCTTGGGGCTTCACCTTGAAGGG
CGGCCGCGAGCATGGTGAGCCTCTGGTCATCACCAAGATCGAAGAAGGAAGCAAAGCTGCATCA
GTGGACAAGCTTCTTGCTGGAGATGAGATAGTGGCCATCAATGATGTCACTCTCTCAGGGTTCA
GACAAGAAGCAATTTGCCTGGTGAAAGGCTCCCACAAGACCCTCAAGCTTGTGGTCAAAAGGAA
AAGTGATCCAAGTTGGAGGCCTCACTCCTGGCATGCTACCAAGTACTTCGATGTCCACCCTGAG
CCACCAGTCTCACTGTTTCTGAACTCCAGCAGTTCCCCTTCCTGGAAGAGCCAGCACCAGGCTA
GTTCTTCCTCCCATGATTTATCTGGCTCATGGGAGCACACCAGCCTACAGCGCACTTCTGACCA
CTTCAGCTCCATGGGCAGCATAGACAGCCTGGACCACAGCTCCCAGCTCTACCCATCTGGTCAC
CTCTCATCTGCCAAGTCCAACAGCAGCATTGACCACCTGGGTGGCCATAGCAAGCGAGACTCGG
CTTATGGCTCCTTTTCCACCTGTTCCAGCACCCCTGACCACACCTTGCCCAAGGCTGACGCCTC
ATCCACTGAGAACATTCTCTACAAAGTTGGCCTTTGGGAGGCTTCCAGGCCAGGCAGCAGCCGA
CAAAGCCAGTCTACAGGTGATCCTCAGGGACTACAGGACAGGCCATCGTCTTTCTTACCTAGGG
TTCCTGGTAACAGTAGTAAAAGCCCAAGGCCGGAGGATAATATTGAGCCCAAAATAGCAACTTC
TGGGAGATCCAATTTTGGGCCTGTCTGGTATGTTCCTGATAAGAAAAAAGCCCCTTCTCCCCCA
CCTCTTGGACTTCCTTTGCGCAGTGATAGCTTTGCTGTGGCAGCCAGGGGCCATGAAAAGGCTC
GGGGCCCTCCATTCTCAGACTTGGCCAGCATGCAGCACTTTACCACCCTGCCTCATGTACAACC
CCGGGGAGACCGCAGAATGGAAACTACTGATCGACAGTGGAAGCTTGCACACCCAAGCAGTGGC
AAAGAAATAGGTAATGTGGGTTACCAGCCAGAAGGCCACCTGGATTGCCGTTGGCTGTGCTCTG
ATGATAGGGCAGGTAGGCCCTCAGGAGCTCCAGGAAGACACCAGTTCTCCCTGTCCAGCACAGA
TGTGCACTTTCTGAAGTCTTACCATGGGAGCCAACACCCACAGCCGTGCAGTGATGAGAGCCCA
AGATTCCCCTCATCACCAAGGGAATTGCTTCGTATAACTCCTAGTGGATGTCTGCAGGAGCCTC
CTGAACTGTCTCAGGATGACAACCCTGCTCAGGTGAGGTGGCCCGGTTCTGTTAACCAGAAGCT
AGATGACAGAGGGCGGAGCCACTATTTTTCTGTGCCCCACAGGCAGCCAGTGCACGGGAGTGCC
CACGTTTTGATACCCCGAAGTGACTATTGGCATTCAGACACAACTCCTGTGGACCTTGAGTGTC
CTCTCTTACGCCCAGACCAGAGGGGCTACCCACAGCAGTATGAGGAGACCCCAGCCTCTCATGA
GAGAGGCGGGTATCAACAGCTAAATGCAGGGATTGAAGGCTGCTGCTCAGGAATCCATGAGCCT
CCTAGAGCCAGCCACACTGTGAGAGCTGGTCTGCAGTGTCCTGGCAATGACTTCAAGTTAGTGG
ATGCAGAGAGTGGAAGAATTTCTCGTCAGAGAACACCCATGCTGCACTCTCTGACCCAAGATGG
TGCATGGAGGCCTGGGAACAGCAAGGATTGTGGAAATGAGAAGCCACCACTGCTTGATGCCCAG
GTGGGTAAACCCACACGGAGGAGTGACCGTTTTGCCACAACACTAAGGAATGAGATTCAGATGC
GCAGAGCAAAGCTACAGAAGAGCAAAAGCACAGTGACATTAGCTGGAGATAGTGAAGCTGAAGA
CTGTGCTGGAGACTGGAGAGTTGATGTGGGGGCTGTTCCAGAAGGTTCCTTCCCCAGCACCTAT
AAAGAGCACCTGAAGGAGGCCCAGACACGTGTTCTAAAGGCCACCTCTTTCCAACGCCGAGATT
TAGATCCCACCCCAGCAGATCAGTATCCAGGACCACCAGAACATAGGACTTGTGACCACAGTGC
CTCATCTTCTTTATCTTCTTTCCCTGGGGAGCCAGACTCTGCCCCTCGCCTCTGTGAAGCAGGT
CTGGCCAAGCCACCCTCTTCTGCAGGTGGTGTTCCCCACATTCTTCGAATTGGAGGCCGGAAAC
GGTTCACAGCAGAGCAGAAACTAAAGTCCTATTCTGAGCCAGAAAAAATTAATGAAGTGGGGCT
TTCAGGGGACCACAGTCCTCATCCTACTATTAGGACATCTGAGGATTCTGTGGGTACATTTGCT
GATAGGTGGAAGTTTTTTGAGGAAACAAGCAAATCTCTTCTCCAGAAGCCAGGCCATAGGCAAG
CTTTCTGTGGGATCCCAAGAGAAAAGGCTGAGAGGCCTCAAACACAGGGCCATGAGTGTGAGAG
TACAGAGCCCTGGTTTCAGAAGAGGTCACGGGCCACCTCTTGTGGAGAGATCCTCAGTGAAGAC
AGAAAAGTAGAAAAGGCCTCAGAGAAATTGAACCCACCCAGAAGGCTTGGAACCTTTGCAGAAT
ATCAAGCATCTTGGAAGGAGCAGAAGAAATCTCTAGAAGCCAGGAGTTCTGGACGATACCATTC
AGCAGATGATATTCTGGATGCTGGCCTAGATCAGCAGCAGAGGCCACAGTACATTCATGAACGG
TCTCGTTCATCACCGTCCACAGATCACTATTCACAGGAAGTGCCTGTTGAACCAAACAGGCAGG
CAGAGGACTCTGGTGGCCAGAAAGAAGCACTTCTTTGTACACTGCAAGCTGAAGAGGGATGCTC
TGCTCCAAGCTCCTCTGTGCTCAGCAGTGCCCAGCCGCAAGACAGCCAGCATGTGAATGAGGAC
CCAACTTCCCCTCAACCAGAAGCCCAGCTCTCCTCCAAGTGTCAACACTTACAGACATCAACCA
TGGAAACTTCTCGCTCCCCTTCACCTCAGTTTGCCCCACAGAAGCTGACAGACAAGCCTCCCCT
GCTTATCCATGAAGACAATTCAGCAAGAATTGAGCGGGTGATGGACAACAACACCACTGTGAAG
ATGGTGCCCATAAAAATTGTGCACTCAGAAAGCCAGCCTGAGAAGGAAAGCCGCCAGAGTCTCG
CTTGCCCAGCCGAGCTGCCCGCACTGCCCAGTGGGCTGGAGAAGGACCAGATCAAGACACTGAG
TACATCAGAGCAGTGCTACTCGCGCTTTTGTGTGTACACACGACAGGAGGTGGAAACCCCTCAT
AGAGCCCGCCCTCCAGAGCCCCAGCCACCTAGCACCCCTGCACCTCCTGTCAGAGATAGCTGTT
CCTCTCCTCCCTCACTCAACTATGGGAAGGCCAAGGAGAAGACCGTGGACGACTTGAAGTCTGA
AGAATTAGCCAGAGAGATTGTGGGAAAGGACAAGTCTTTGGCTGACATCCTGGACCCCAGCGTG
AAAATCAAAACTACCATGGATCTGATGGAGGGAATTTTCCCCAAAGATGAGTACCTCCTAGAGG
AAGCTCAGCAACGGAGGAAGCTGCTCCCCAAAGTCCCCTCACCCAGAGTCACAGAGGACAAGAA
ACAGGACCCAGGTATGCCAGGGGTTGTGTCCTTGGCCACAAATTCTACCTATTATAGCACATCA
GCCCCCAAGGCAGAACTGCTTATCAAGATGAAGGACCTACAGGAGCCTGAGGAGTATTCAGCAG
GTGACTTGGATCATGACCTTTCCATTAAGAAGCAAGAGCTCATCGACAGTATCAGCCGCAAGCT
GCAGGTGCTCCGAGAAGCACGTGAGAGTCTGCTGGAGGACATCCAAGCCAACAATGCTCTCGGG
GATGAAGTGGAAGCCATTGTGAAAGATGTCTGCAAGCCCAATGAGTTTGACAAGTTCCGGATGT
TCATTGGAGACCTGGACAAAGTGGTGAACCTCCTGCTGTCACTGTCAGGACGCCTGGCCCGTGT
GGAAAATGCCCTTAATAATTTAGATGACAGTCCTTCTCCTGGAGATCGGCAGTCACTGTTGGAG
AAACAGAGAGTCCTAACTCAGCAGCATGAGGATGCGAAGGAGCTTAAAGAGAACCTGGACCGTC
GTGAGCGCATTGTGTTCGACATCCTGGCCACCTACCTCAGCGAGGAGAACCTGGCTGACTATGA
GCACTTCGTGAAGATGAAGTCAGCCCTCATCATTGAGCAGCGAGAGCTGGAAGATAAAATCCAC
CTGGGTGAAGAACAGCTCAAGTGTTTGTTTGACAGCCTGCAGCCTGAGAGAAGCAAATGAGCGA
CCCATTCCTGCAGAAGGCAGACACAGAGCCTTGGAGATTAATGCCTAGGACTACAAGAGTGAAC
CCAAGCCTATTTGCCCATCTCTGGAGACTCACACTCTGGAGCCACAAGGCTAGTAAAAAAGCAA
TAATGTCCTGCTAGTATGTGATGCTTTATTTATGATTTTCATTTCTGTTGGTTTGCTGAACATA
GTTTCTCGTATCACATGTGATGTCAGAAAATGCCAGGTTTTGCTAGTCAACAAGGGTTCCCTAG
CACTCCTTCACAGCAGTGGCACCATTGTTCCTTCCTTGTATAGATGCCAAATACATCCCTATGG
TGCATGAGAGGAAAGACCCTTGTCATTTAGCCAGGCATGGGCTGCTGTGTTTTCTGTCCTTATT
CATTTAACAATGTGAGCATTCATCATTCTGTCATCATGACATTCTCTGACCCAGTAAAAATCAG
TGATGATAATTTATTGATGTGTGAAAAACATGAACAGTTTCCTAGTAGTTAAAAACTAACTTTA
AAATGAACAACCTACATATTGAATTCATTCATTCCAAGATTAAAATGATCACATAAATTGTGTG
CATATTTTGAAACACCCCATATAGCTAGTATCCTTCTTGCCACATCTTAAATAATTTCTACCCA
AGTGATATTAATTGGTCAAAAGTGTGTCTACTAACAGTGTTATTGCTTGCTCTTTATTTCCTGA
GACCAATGAAATATTTTGAAGTTTCCTTCCCCAGAACACTAATTTGTGTACATGATCATTAATA
ATGCATGATCTTTAATGATAATCAGTGGTTTATCTCTTTTTTTATCTGTTACCATGGGCCACAT
GCCACGTACCTTAAGACTTAAGATTCCATCCAATGGTCAGAGGTCCTGTGCAGTGACTAGTGCT
TACATTTGAAACAGAGTTTTGTCCTTGACAAATAGAGTGTTACTCATTAAAGCTACAATGCCAT
CCTGTTGGTTTCCAGTTGACAGGACAGAGATCGGGAAAAGACATTTGTAAATGGTGTCTGACTT
GTTGCTCCTTTTGTGTTTGCTATTTGTTTTAGAAGAGTCTAACCCAGATTGGCTTCAAACTCCC
TATGTAGTCCAGTGACCTTGAACTCCTGGTCCTCTTGCCTCTACTTCCTAATTTCTGGGTTTAG
CAGCATATCCTACTTCATGGCTTCATACATCTGATAAAGGATCTGTATAAAGAACTTCCAACAC
CCAATAGTAGGAATGGTTTGAAAAAAAAGTGGGCAAAAGACTTGACTAGACACTTCACCAAAGA
GGATATATGTATGGCAGATAAACACATGAAAAATGTTCAGTTACCAGTGGCGTGTATAGCTTAT
GTTAAGTGTTTGTAGATTTGGTGTAGTTCAAATGCTGTTTATGTAACTAAATGCATGGTGAGTG
ATGAGCAAGTCCTCCTGGTGACTTGATATGTAGGCATCACTAGTCTTTGTTCTATCAAGGGATC
ATTTAATTCATATTTTCCCCAGAGATTGCAGCAGATACAAAGATTTCCCTCTCTAAGCAGTAGC
CACACCTTTTCCAAAATACACATGCATACTTACATCCATGTGTATGTGCATGTGTTCACACTCC
CACACAGAGTTGTCTTAAAGGACCAGAATCCATGCTTCTTGAGCCAGAGGAACAGATATTGACA
GCATAAGCTCTGGTGAAGATGACAGTGTCCTCCAAACAGCTGAGTCAAGATGGGCGAGCTTCTG
TACTGCAGACCATGGATGGCATGGTTGAATGCGTATCACTGTTAGTCAAAAGGAGATCTTGCAA
AAGTGTCGATTCCTATTAATTCCTATTAAATGAAGCTACGTCTACCTTTTGAAGTCCCTGATCT
GCCACTGCAGCCTCTTCCTCCTTCCAGTTCGTCATCCCTTGCTGTGAATGTGGATCATGTCAGA
AAACATGATGCTGGCTCTCCACAAACTTTCCAAGGAATTGCAGACTATTTTGTTTTTAATTTAC
ACCAAGCTATTTACCTGTGGTTCTTTATCCCCAAATACAGTGTTGTGGACATTTTAATGATGTG
TATAACATGTGAGTAATGGAACTTTGTTTGTCTGTAACCTGCCTTTTCATGTTGCTTCAAGATT
GTTATGGGAAACAGTACGTAGTGCTCAAGCATGCTTGTAATGAAACACATAACAATTATGACCT
TCCTATCCATTCCCTGCTTGCCTGTTCCATGTCTGATTAGCAGGGATCCAAGAATTCCAGAGAG
TCCATATACATATGTCTATGAATTGTGATATTACTGCATAAGAAACAATCTGGTGCTAATGGTT
GGTCCTTGGCATGCAAAGGCGTGGGCATGGGCACAGCTATGGAACTCTCTGTACATATACTGAC
CTTGCCTGTGGTCAGCTTTTGTGACTTTACCCTGAACTCTACCCTGGCAAATATGCACATTGAT
GCTTGATGCTTACCACTTATCAACAGATCCTCTTGCTTGACCTTAACAAAATAAATAGTGTCTC
TTCAAATGAAA

hide sequence

RefSeq Acc Id:

XM_006256816 ⟹ XP_006256878

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	X	25,308,163 - 25,480,194 (-)	NCBI
mRatBN7.2	X	21,814,980 - 21,983,724 (-)	NCBI
Rnor_6.0	X	23,481,380 - 23,649,424 (-)	NCBI
Rnor_5.0	X	23,895,809 - 24,066,198 (-)	NCBI

Sequence:

show sequence

TAGGTGGTGGGCCGGTTCGCGCTTGCCCGAGTGCATGGGCGTGGACCTTAGCGACTGGAGGGAC
TGAGCGTGGAGGGGCTGAGCGCCCCGCGTCATGGAGGGCGCCGAGCCCCGTGCACGGCCCGAGC
GCTTGGCTGAAGCTGAGGCGCGGGCGACCGACGGCGTCCGTCTGGTGGAGGTGCAGCTGAGCGG
CGGTGCCCCTTGGGGCTTCACCTTGAAGGGCGGCCGCGAGCATGGTGAGCCTCTGGTCATCACC
AAGATCGAAGAAGGAAGCAAAGCTGCATCAGTGGACAAGCTTCTTGCTGGAGATGAGATAGTGG
CCATCAATGATGTCACTCTCTCAGGGTTCAGACAAGAAGCAATTTGCCTGGTGAAAGGCTCCCA
CAAGACCCTCAAGCTTGTGGTCAAAAGGAAAAGTGATCCAAGTTGGAGGCCTCACTCCTGGCAT
GCTACCAAGTACTTCGATGTCCACCCTGAGCCACCAGTCTCACTGTTTCTGAACTCCAGCAGTT
CCCCTTCCTGGAAGAGCCAGCACCAGGCTAGTTCTTCCTCCCATGATTTATCTGGCTCATGGGA
GCACACCAGCCTACAGCGCACTTCTGACCACTTCAGCTCCATGGGCAGCATAGACAGCCTGGAC
CACAGCTCCCAGCTCTACCCATCTGGTCACCTCTCATCTGCCAAGTCCAACAGCAGCATTGACC
ACCTGGGTGGCCATAGCAAGCGAGACTCGGCTTATGGCTCCTTTTCCACCTGTTCCAGCACCCC
TGACCACACCTTGCCCAAGGCTGACGCCTCATCCACTGAGAACATTCTCTACAAAGTTGGCCTT
TGGGAGGCTTCCAGGCCAGGCAGCAGCCGACAAAGCCAGTCTACAGGTGATCCTCAGGGACTAC
AGGACAGGCCATCGTCTTTCTTACCTAGGGTTCCTGGTAACAGTAGTAAAAGCCCAAGGCCGGA
GGATAATATTGAGCCCAAAATAGCAACTTCTGGGAGATCCAATTTTGGGCCTGTCTGGTATGTT
CCTGATAAGAAAAAAGCCCCTTCTCCCCCACCTCTTGGACTTCCTTTGCGCAGTGATAGCTTTG
CTGTGGCAGCCAGGGGCCATGAAAAGGCTCGGGGCCCTCCATTCTCAGACTTGGCCAGCATGCA
GCACTTTACCACCCTGCCTCATGTACAACCCCGGGGAGACCGCAGAATGGAAACTACTGATCGA
CAGTGGAAGCTTGCACACCCAAGCAGTGGCAAAGAAATAGGTAATGTGGGTTACCAGCCAGAAG
GCCACCTGGATTGCCGTTGGCTGTGCTCTGATGATAGGGCAGGTAGGCCCTCAGGAGCTCCAGG
AAGACACCAGTTCTCCCTGTCCAGCACAGATGTGCACTTTCTGAAGTCTTACCATGGGAGCCAA
CACCCACAGCCGTGCAGTGATGAGAGCCCAAGATTCCCCTCATCACCAAGGGAATTGCTTCGTA
TAACTCCTAGTGGATGTCTGCAGGAGCCTCCTGAACTGTCTCAGGATGACAACCCTGCTCAGGT
GAGGTGGCCCGGTTCTGTTAACCAGAAGCTAGATGACAGAGGGCGGAGCCACTATTTTTCTGTG
CCCCACAGGCAGCCAGTGCACGGGAGTGCCCACGTTTTGATACCCCGAAGTGACTATTGGCATT
CAGACACAACTCCTGTGGACCTTGAGTGTCCTCTCTTACGCCCAGACCAGAGGGGCTACCCACA
GCAGTATGAGGAGACCCCAGCCTCTCATGAGAGAGGCGGGTATCAACAGCTAAATGCAGGGATT
GAAGGCTGCTGCTCAGGAATCCATGAGCCTCCTAGAGCCAGCCACACTGTGAGAGCTGGTCTGC
AGTGTCCTGGCAATGACTTCAAGTTAGTGGATGCAGAGAGTGGAAGAATTTCTCGTCAGAGAAC
ACCCATGCTGCACTCTCTGACCCAAGATGGTGCATGGAGGCCTGGGAACAGCAAGGATTGTGGA
AATGAGAAGCCACCACTGCTTGATGCCCAGGTGGGTAAACCCACACGGAGGAGTGACCGTTTTG
CCACAACACTAAGGAATGAGATTCAGATGCGCAGAGCAAAGCTACAGAAGAGCAAAAGCACAGT
GACATTAGCTGGAGATAGTGAAGCTGAAGACTGTGCTGGAGACTGGAGAGTTGATGTGGGGGCT
GTTCCAGAAGGTTCCTTCCCCAGCACCTATAAAGAGCACCTGAAGGAGGCCCAGACACGTGTTC
TAAAGGCCACCTCTTTCCAACGCCGAGATTTAGATCCCACCCCAGCAGATCAGTATCCAGGACC
ACCAGAACATAGGACTTGTGACCACAGTGCCTCATCTTCTTTATCTTCTTTCCCTGGGGAGCCA
GACTCTGCCCCTCGCCTCTGTGAAGCAGGTCTGGCCAAGCCACCCTCTTCTGCAGGTGGTGTTC
CCCACATTCTTCGAATTGGAGGCCGGAAACGGTTCACAGCAGAGCAGAAACTAAAGTCCTATTC
TGAGCCAGAAAAAATTAATGAAGTGGGGCTTTCAGGGGACCACAGTCCTCATCCTACTATTAGG
ACATCTGAGGATTCTGTGGGTACATTTGCTGATAGGTGGAAGTTTTTTGAGGAAACAAGCAAAT
CTCTTCTCCAGAAGCCAGGCCATAGGCAAGCTTTCTGTGGGATCCCAAGAGAAAAGGCTGAGAG
GCCTCAAACACAGGGCCATGAGTGTGAGAGTACAGAGCCCTGGTTTCAGAAGAGGTCACGGGCC
ACCTCTTGTGGAGAGATCCTCAGTGAAGACAGAAAAGTAGAAAAGGCCTCAGAGAAATTGAACC
CACCCAGAAGGCTTGGAACCTTTGCAGAATATCAAGCATCTTGGAAGGAGCAGAAGAAATCTCT
AGAAGCCAGGAGTTCTGGACGATACCATTCAGCAGATGATATTCTGGATGCTGGCCTAGATCAG
CAGCAGAGGCCACAGTACATTCATGAACGGTCTCGTTCATCACCGTCCACAGATCACTATTCAC
AGGAAGTGCCTGTTGAACCAAACAGGCAGGCAGAGGACTCTGGTGGCCAGAAAGAAGCACTTCT
TTGTACACTGCAAGCTGAAGAGGGATGCTCTGCTCCAAGCAGTGCCCAGCCGCAAGACAGCCAG
CATGTGAATGAGGACCCAACTTCCCCTCAACCAGAAGCCCAGCTCTCCTCCAAGTGTCAACACT
TACAGACATCAACCATGGAAACTTCTCGCTCCCCTTCACCTCAGTTTGCCCCACAGAAGCTGAC
AGACAAGCCTCCCCTGCTTATCCATGAAGACAATTCAGCAAGAATTGAGCGGGTGATGGACAAC
AACACCACTGTGAAGATGGTGCCCATAAAAATTGTGCACTCAGAAAGCCAGCCTGAGAAGGAAA
GCCGCCAGAGTCTCGCTTGCCCAGCCGAGCTGCCCGCACTGCCCAGTGGGCTGGAGAAGGACCA
GATCAAGACACTGAGTACATCAGAGCAGTGCTACTCGCGCTTTTGTGTGTACACACGACAGGAG
GTGGAAACCCCTCATAGAGCCCGCCCTCCAGAGCCCCAGCCACCTAGCACCCCTGCACCTCCTG
TCAGAGATAGCTGTTCCTCTCCTCCCTCACTCAACTATGGGAAGGCCAAGGAGAAGACCGTGGA
CGACTTGAAGTCTGAAGAATTAGCCAGAGAGATTGTGGGAAAGGACAAGTCTTTGGCTGACATC
CTGGACCCCAGCGTGAAAATCAAAACTACCATGGATCTGATGGAGGGAATTTTCCCCAAAGATG
AGTACCTCCTAGAGGAAGCTCAGCAACGGAGGAAGCTGCTCCCCAAAGTCCCCTCACCCAGAGT
CACAGAGGACAAGAAACAGGACCCAGGTATGCCAGGGGTTGTGTCCTTGGCCACAAATTCTACC
TATTATAGCACATCAGCCCCCAAGGCAGAACTGCTTATCAAGATGAAGGACCTACAGGAGCCTG
AGGAGTATTCAGCAGGTGACTTGGATCATGACCTTTCCATTAAGAAGCAAGAGCTCATCGACAG
TATCAGCCGCAAGCTGCAGGTGCTCCGAGAAGCACGTGAGAGTCTGCTGGAGGACATCCAAGCC
AACAATGCTCTCGGGGATGAAGTGGAAGCCATTGTGAAAGATGTCTGCAAGCCCAATGAGTTTG
ACAAGTTCCGGATGTTCATTGGAGACCTGGACAAAGTGGTGAACCTCCTGCTGTCACTGTCAGG
ACGCCTGGCCCGTGTGGAAAATGCCCTTAATAATTTAGATGACAGTCCTTCTCCTGGAGATCGG
CAGTCACTGTTGGAGAAACAGAGAGTCCTAACTCAGCAGCATGAGGATGCGAAGGAGCTTAAAG
AGAACCTGGACCGTCGTGAGCGCATTGTGTTCGACATCCTGGCCACCTACCTCAGCGAGGAGAA
CCTGGCTGACTATGAGCACTTCGTGAAGATGAAGTCAGCCCTCATCATTGAGCAGCGAGAGCTG
GAAGATAAAATCCACCTGGGTGAAGAACAGCTCAAGTGTTTGTTTGACAGCCTGCAGCCTGAGA
GAAGCAAATGA

hide sequence

RefSeq Acc Id:

XM_006256817 ⟹ XP_006256879

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	X	25,308,163 - 25,480,194 (-)	NCBI
mRatBN7.2	X	21,814,980 - 21,983,499 (-)	NCBI
Rnor_6.0	X	23,481,380 - 23,649,330 (-)	NCBI
Rnor_5.0	X	23,895,809 - 24,066,198 (-)	NCBI

Sequence:

show sequence

ATGGAGGGCGCCGAGCCCCGTGCACGGCCCGAGCGCTTGGCTGAAGCTGAGGCGCGGGCGACCG
ACGGCGTCCGTCTGGTGGAGGTGCAGCTGAGCGGCGGTGCCCCTTGGGGCTTCACCTTGAAGGG
CGGCCGCGAGCATGGTGAGCCTCTGGTCATCACCAAGATCGAAGAAGGAAGCAAAGCTGCATCA
GTGGACAAGCTTCTTGCTGGAGATGAGATAGTGGCCATCAATGATGTCACTCTCTCAGGGTTCA
GACAAGAAGCAATTTGCCTGGTGAAAGGCTCCCACAAGACCCTCAAGCTTGTGGTCAAAAGGAA
AAGTGATCCAAGTTGGAGGCCTCACTCCTGGCATGCTACCAAGTACTTCGATGTCCACCCTGAG
CCACCAGTCTCACTGTTTCTGAACTCCAGCAGTTCCCCTTCCTGGAAGAGCCAGCACCAGGCTA
GTTCTTCCTCCCATGATTTATCTGGCTCATGGGAGCACACCAGCCTACAGCGCACTTCTGACCA
CTTCAGCTCCATGGGCAGCATAGACAGCCTGGACCACAGCTCCCAGCTCTACCCATCTGGTCAC
CTCTCATCTGCCAAGTCCAACAGCAGCATTGACCACCTGGGTGGCCATAGCAAGCGAGACTCGG
CTTATGGCTCCTTTTCCACCTGTTCCAGCACCCCTGACCACACCTTGCCCAAGGCTGACGCCTC
ATCCACTGAGAACATTCTCTACAAAGTTGGCCTTTGGGAGGCTTCCAGGCCAGGCAGCAGCCGA
CAAAGCCAGTCTACAGGTGATCCTCAGGGACTACAGGACAGGCCATCGTCTTTCTTACCTAGGG
TTCCTGGTAACAGTAGTAAAAGCCCAAGGCCGGAGGATAATATTGAGCCCAAAATAGCAACTTC
TGGGAGATCCAATTTTGGGCCTGTCTGGTATGTTCCTGATAAGAAAAAAGCCCCTTCTCCCCCA
CCTCTTGGACTTCCTTTGCGCAGTGATAGCTTTGCTGTGGCAGCCAGGGGCCATGAAAAGGCTC
GGGGCCCTCCATTCTCAGACTTGGCCAGCATGCAGCACTTTACCACCCTGCCTCATGTACAACC
CCGGGGAGACCGCAGAATGGAAACTACTGATCGACAGTGGAAGCTTGCACACCCAAGCAGTGGC
AAAGAAATAGGTAATGTGGGTTACCAGCCAGAAGGCCACCTGGATTGCCGTTGGCTGTGCTCTG
ATGATAGGGCAGGTAGGCCCTCAGGAGCTCCAGGAAGACACCAGTTCTCCCTGTCCAGCACAGA
TGTGCACTTTCTGAAGTCTTACCATGGGAGCCAACACCCACAGCCGTGCAGTGATGAGAGCCCA
AGATTCCCCTCATCACCAAGGGAATTGCTTCGTATAACTCCTAGTGGATGTCTGCAGGAGCCTC
CTGAACTGTCTCAGGATGACAACCCTGCTCAGGTGAGGTGGCCCGGTTCTGTTAACCAGAAGCT
AGATGACAGAGGGCGGAGCCACTATTTTTCTGTGCCCCACAGGCAGCCAGTGCACGGGAGTGCC
CACGTTTTGATACCCCGAAGTGACTATTGGCATTCAGACACAACTCCTGTGGACCTTGAGTGTC
CTCTCTTACGCCCAGACCAGAGGGGCTACCCACAGCAGTATGAGGAGACCCCAGCCTCTCATGA
GAGAGGCGGGTATCAACAGCTAAATGCAGGGATTGAAGGCTGCTGCTCAGGAATCCATGAGCCT
CCTAGAGCCAGCCACACTGTGAGAGCTGGTCTGCAGTGTCCTGGCAATGACTTCAAGTTAGTGG
ATGCAGAGAGTGGAAGAATTTCTCGTCAGAGAACACCCATGCTGCACTCTCTGACCCAAGATGG
TGCATGGAGGCCTGGGAACAGCAAGGATTGTGGAAATGAGAAGCCACCACTGCTTGATGCCCAG
GTGGGTAAACCCACACGGAGGAGTGACCGTTTTGCCACAACACTAAGGAATGAGATTCAGATGC
GCAGAGCAAAGCTACAGAAGAGCAAAAGCACAGTGACATTAGCTGGAGATAGTGAAGCTGAAGA
CTGTGCTGGAGACTGGAGAGTTGATGTGGGGGCTGTTCCAGAAGGTTCCTTCCCCAGCACCTAT
AAAGAGCACCTGAAGGAGGCCCAGACACGTGTTCTAAAGGCCACCTCTTTCCAACGCCGAGATT
TAGATCCCACCCCAGCAGATCAGTATCCAGGACCACCAGAACATAGGACTTGTGACCACAGTGC
CTCATCTTCTTTATCTTCTTTCCCTGGGGAGCCAGACTCTGCCCCTCGCCTCTGTGAAGCAGGT
CTGGCCAAGCCACCCTCTTCTGCAGGTGGTGTTCCCCACATTCTTCGAATTGGAGGCCGGAAAC
GGTTCACAGCAGAGCAGAAACTAAAGTCCTATTCTGAGCCAGAAAAAATTAATGAAGTGGGGCT
TTCAGGGGACCACAGTCCTCATCCTACTATTAGGACATCTGAGGATTCTGTGGGTACATTTGCT
GATAGGTGGAAGTTTTTTGAGGAAACAAGCAAATCTCTTCTCCAGAAGCCAGGCCATAGGCAAG
CTTTCTGTGGGATCCCAAGAGAAAAGGCTGAGAGGCCTCAAACACAGGGCCATGAGTGTGAGAG
TACAGAGCCCTGGTTTCAGAAGAGGTCACGGGCCACCTCTTGTGGAGAGATCCTCAGTGAAGAC
AGAAAAGTAGAAAAGGCCTCAGAGAAATTGAACCCACCCAGAAGGCTTGGAACCTTTGCAGAAT
ATCAAGCATCTTGGAAGGAGCAGAAGAAATCTCTAGAAGCCAGGAGTTCTGGACGATACCATTC
AGCAGATGATATTCTGGATGCTGGCCTAGATCAGCAGCAGAGGCCACAGTACATTCATGAACGG
TCTCGTTCATCACCGTCCACAGATCACTATTCACAGGAAGTGCCTGTTGAACCAAACAGGCAGG
CAGAGGACTCTGGTGGCCAGAAAGAAGCACTTCTTTGTACACTGCAAGCTGAAGAGGGATGCTC
TGCTCCAAGTGCCCAGCCGCAAGACAGCCAGCATGTGAATGAGGACCCAACTTCCCCTCAACCA
GAAGCCCAGCTCTCCTCCAAGTGTCAACACTTACAGACATCAACCATGGAAACTTCTCGCTCCC
CTTCACCTCAGTTTGCCCCACAGAAGCTGACAGACAAGCCTCCCCTGCTTATCCATGAAGACAA
TTCAGCAAGAATTGAGCGGGTGATGGACAACAACACCACTGTGAAGATGGTGCCCATAAAAATT
GTGCACTCAGAAAGCCAGCCTGAGAAGGAAAGCCGCCAGAGTCTCGCTTGCCCAGCCGAGCTGC
CCGCACTGCCCAGTGGGCTGGAGAAGGACCAGATCAAGACACTGAGTACATCAGAGCAGTGCTA
CTCGCGCTTTTGTGTGTACACACGACAGGAGGTGGAAACCCCTCATAGAGCCCGCCCTCCAGAG
CCCCAGCCACCTAGCACCCCTGCACCTCCTGTCAGAGATAGCTGTTCCTCTCCTCCCTCACTCA
ACTATGGGAAGGCCAAGGAGAAGACCGTGGACGACTTGAAGTCTGAAGAATTAGCCAGAGAGAT
TGTGGGAAAGGACAAGTCTTTGGCTGACATCCTGGACCCCAGCGTGAAAATCAAAACTACCATG
GATCTGATGGAGGGAATTTTCCCCAAAGATGAGTACCTCCTAGAGGAAGCTCAGCAACGGAGGA
AGCTGCTCCCCAAAGTCCCCTCACCCAGAGTCACAGAGGACAAGAAACAGGACCCAGGTATGCC
AGGGGTTGTGTCCTTGGCCACAAATTCTACCTATTATAGCACATCAGCCCCCAAGGCAGAACTG
CTTATCAAGATGAAGGACCTACAGGAGCCTGAGGAGTATTCAGCAGGTGACTTGGATCATGACC
TTTCCATTAAGAAGCAAGAGCTCATCGACAGTATCAGCCGCAAGCTGCAGGTGCTCCGAGAAGC
ACGTGAGAGTCTGCTGGAGGACATCCAAGCCAACAATGCTCTCGGGGATGAAGTGGAAGCCATT
GTGAAAGATGTCTGCAAGCCCAATGAGTTTGACAAGTTCCGGATGTTCATTGGAGACCTGGACA
AAGTGGTGAACCTCCTGCTGTCACTGTCAGGACGCCTGGCCCGTGTGGAAAATGCCCTTAATAA
TTTAGATGACAGTCCTTCTCCTGGAGATCGGCAGTCACTGTTGGAGAAACAGAGAGTCCTAACT
CAGCAGCATGAGGATGCGAAGGAGCTTAAAGAGAACCTGGACCGTCGTGAGCGCATTGTGTTCG
ACATCCTGGCCACCTACCTCAGCGAGGAGAACCTGGCTGACTATGAGCACTTCGTGAAGATGAA
GTCAGCCCTCATCATTGAGCAGCGAGAGCTGGAAGATAAAATCCACCTGGGTGAAGAACAGCTC
AAGTGTTTGTTTGACAGCCTGCAGCCTGAGAGAAGCAAATGA

hide sequence

RefSeq Acc Id:

XM_008773126 ⟹ XP_008771348

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	X	25,308,163 - 25,479,424 (-)	NCBI
mRatBN7.2	X	21,814,980 - 21,983,724 (-)	NCBI
Rnor_6.0	X	23,481,380 - 23,649,424 (-)	NCBI

Sequence:

show sequence

TAGGTGGTGGGCCGGTTCGCGCTTGCCCGAGTGCATGGGCGTGGACCTTAGCGACTGGAGGGAC
TGAGCGTGGAGGGGCTGAGCGCCCCGCGTCATGGAGGGCGCCGAGCCCCGTGCACGGCCCGAGC
GCTTGGCTGAAGCTGAGGCGCGGGCGACCGACGGCGTCCGTCTGGTGGAGGTGCAGCTGAGCGG
CGGTGCCCCTTGGGGCTTCACCTTGAAGGGCGGCCGCGAGCATGGTGAGCCTCTGGTCATCACC
AAGATCGAAGAAGGAAGCAAAGCTGCATCAGTGGACAAGCTTCTTGCTGGAGATGAGATAGTGG
CCATCAATGATGTCACTCTCTCAGGGTTCAGACAAGAAGCAATTTGCCTGGTGAAAGGCTCCCA
CAAGACCCTCAAGCTTGTGGTCAAAAGTTCTTCCTCCCATGATTTATCTGGCTCATGGGAGCAC
ACCAGCCTACAGCGCACTTCTGACCACTTCAGCTCCATGGGCAGCATAGACAGCCTGGACCACA
GCTCCCAGCTCTACCCATCTGGTCACCTCTCATCTGCCAAGTCCAACAGCAGCATTGACCACCT
GGGTGGCCATAGCAAGCGAGACTCGGCTTATGGCTCCTTTTCCACCTGTTCCAGCACCCCTGAC
CACACCTTGCCCAAGGCTGACGCCTCATCCACTGAGAACATTCTCTACAAAGTTGGCCTTTGGG
AGGCTTCCAGGCCAGGCAGCAGCCGACAAAGCCAGTCTACAGGTGATCCTCAGGGACTACAGGA
CAGGCCATCGTCTTTCTTACCTAGGGTTCCTGGTAACAGTAGTAAAAGCCCAAGGCCGGAGGAT
AATATTGAGCCCAAAATAGCAACTTCTGGGAGATCCAATTTTGGGCCTGTCTGGTATGTTCCTG
ATAAGAAAAAAGCCCCTTCTCCCCCACCTCTTGGACTTCCTTTGCGCAGTGATAGCTTTGCTGT
GGCAGCCAGGGGCCATGAAAAGGCTCGGGGCCCTCCATTCTCAGACTTGGCCAGCATGCAGCAC
TTTACCACCCTGCCTCATGTACAACCCCGGGGAGACCGCAGAATGGAAACTACTGATCGACAGT
GGAAGCTTGCACACCCAAGCAGTGGCAAAGAAATAGGTAATGTGGGTTACCAGCCAGAAGGCCA
CCTGGATTGCCGTTGGCTGTGCTCTGATGATAGGGCAGGTAGGCCCTCAGGAGCTCCAGGAAGA
CACCAGTTCTCCCTGTCCAGCACAGATGTGCACTTTCTGAAGTCTTACCATGGGAGCCAACACC
CACAGCCGTGCAGTGATGAGAGCCCAAGATTCCCCTCATCACCAAGGGAATTGCTTCGTATAAC
TCCTAGTGGATGTCTGCAGGAGCCTCCTGAACTGTCTCAGGATGACAACCCTGCTCAGGTGAGG
TGGCCCGGTTCTGTTAACCAGAAGCTAGATGACAGAGGGCGGAGCCACTATTTTTCTGTGCCCC
ACAGGCAGCCAGTGCACGGGAGTGCCCACGTTTTGATACCCCGAAGTGACTATTGGCATTCAGA
CACAACTCCTGTGGACCTTGAGTGTCCTCTCTTACGCCCAGACCAGAGGGGCTACCCACAGCAG
TATGAGGAGACCCCAGCCTCTCATGAGAGAGGCGGGTATCAACAGCTAAATGCAGGGATTGAAG
GCTGCTGCTCAGGAATCCATGAGCCTCCTAGAGCCAGCCACACTGTGAGAGCTGGTCTGCAGTG
TCCTGGCAATGACTTCAAGTTAGTGGATGCAGAGAGTGGAAGAATTTCTCGTCAGAGAACACCC
ATGCTGCACTCTCTGACCCAAGATGGTGCATGGAGGCCTGGGAACAGCAAGGATTGTGGAAATG
AGAAGCCACCACTGCTTGATGCCCAGGTGGGTAAACCCACACGGAGGAGTGACCGTTTTGCCAC
AACACTAAGGAATGAGATTCAGATGCGCAGAGCAAAGCTACAGAAGAGCAAAAGCACAGTGACA
TTAGCTGGAGATAGTGAAGCTGAAGACTGTGCTGGAGACTGGAGAGTTGATGTGGGGGCTGTTC
CAGAAGGTTCCTTCCCCAGCACCTATAAAGAGCACCTGAAGGAGGCCCAGACACGTGTTCTAAA
GGCCACCTCTTTCCAACGCCGAGATTTAGATCCCACCCCAGCAGATCAGTATCCAGGACCACCA
GAACATAGGACTTGTGACCACAGTGCCTCATCTTCTTTATCTTCTTTCCCTGGGGAGCCAGACT
CTGCCCCTCGCCTCTGTGAAGCAGGTCTGGCCAAGCCACCCTCTTCTGCAGGTGGTGTTCCCCA
CATTCTTCGAATTGGAGGCCGGAAACGGTTCACAGCAGAGCAGAAACTAAAGTCCTATTCTGAG
CCAGAAAAAATTAATGAAGTGGGGCTTTCAGGGGACCACAGTCCTCATCCTACTATTAGGACAT
CTGAGGATTCTGTGGGTACATTTGCTGATAGGTGGAAGTTTTTTGAGGAAACAAGCAAATCTCT
TCTCCAGAAGCCAGGCCATAGGCAAGCTTTCTGTGGGATCCCAAGAGAAAAGGCTGAGAGGCCT
CAAACACAGGGCCATGAGTGTGAGAGTACAGAGCCCTGGTTTCAGAAGAGGTCACGGGCCACCT
CTTGTGGAGAGATCCTCAGTGAAGACAGAAAAGTAGAAAAGGCCTCAGAGAAATTGAACCCACC
CAGAAGGCTTGGAACCTTTGCAGAATATCAAGCATCTTGGAAGGAGCAGAAGAAATCTCTAGAA
GCCAGGAGTTCTGGACGATACCATTCAGCAGATGATATTCTGGATGCTGGCCTAGATCAGCAGC
AGAGGCCACAGTACATTCATGAACGGTCTCGTTCATCACCGTCCACAGATCACTATTCACAGGA
AGTGCCTGTTGAACCAAACAGGCAGGCAGAGGACTCTGGTGGCCAGAAAGAAGCACTTCTTTGT
ACACTGCAAGCTGAAGAGGGATGCTCTGCTCCAAGCTCCTCTGTGCTCAGCAGTGCCCAGCCGC
AAGACAGCCAGCATGTGAATGAGGACCCAACTTCCCCTCAACCAGAAGCCCAGCTCTCCTCCAA
GTGTCAACACTTACAGACATCAACCATGGAAACTTCTCGCTCCCCTTCACCTCAGTTTGCCCCA
CAGAAGCTGACAGACAAGCCTCCCCTGCTTATCCATGAAGACAATTCAGCAAGAATTGAGCGGG
TGATGGACAACAACACCACTGTGAAGATGGTGCCCATAAAAATTGTGCACTCAGAAAGCCAGCC
TGAGAAGGAAAGCCGCCAGAGTCTCGCTTGCCCAGCCGAGCTGCCCGCACTGCCCAGTGGGCTG
GAGAAGGACCAGATCAAGACACTGAGTACATCAGAGCAGTGCTACTCGCGCTTTTGTGTGTACA
CACGACAGGAGGTGGAAACCCCTCATAGAGCCCGCCCTCCAGAGCCCCAGCCACCTAGCACCCC
TGCACCTCCTGTCAGAGATAGCTGTTCCTCTCCTCCCTCACTCAACTATGGGAAGGCCAAGGAG
AAGACCGTGGACGACTTGAAGTCTGAAGAATTAGCCAGAGAGATTGTGGGAAAGGACAAGTCTT
TGGCTGACATCCTGGACCCCAGCGTGAAAATCAAAACTACCATGGATCTGATGGAGGGAATTTT
CCCCAAAGATGAGTACCTCCTAGAGGAAGCTCAGCAACGGAGGAAGCTGCTCCCCAAAGTCCCC
TCACCCAGAGTCACAGAGGACAAGAAACAGGACCCAGGTATGCCAGGGGTTGTGTCCTTGGCCA
CAAATTCTACCTATTATAGCACATCAGCCCCCAAGGCAGAACTGCTTATCAAGATGAAGGACCT
ACAGGAGCCTGAGGAGTATTCAGCAGGTGACTTGGATCATGACCTTTCCATTAAGAAGCAAGAG
CTCATCGACAGTATCAGCCGCAAGCTGCAGGTGCTCCGAGAAGCACGTGAGAGTCTGCTGGAGG
ACATCCAAGCCAACAATGCTCTCGGGGATGAAGTGGAAGCCATTGTGAAAGATGTCTGCAAGCC
CAATGAGTTTGACAAGTTCCGGATGTTCATTGGAGACCTGGACAAAGTGGTGAACCTCCTGCTG
TCACTGTCAGGACGCCTGGCCCGTGTGGAAAATGCCCTTAATAATTTAGATGACAGTCCTTCTC
CTGGAGATCGGCAGTCACTGTTGGAGAAACAGAGAGTCCTAACTCAGCAGCATGAGGATGCGAA
GGAGCTTAAAGAGAACCTGGACCGTCGTGAGCGCATTGTGTTCGACATCCTGGCCACCTACCTC
AGCGAGGAGAACCTGGCTGACTATGAGCACTTCGTGAAGATGAAGTCAGCCCTCATCATTGAGC
AGCGAGAGCTGGAAGATAAAATCCACCTGGGTGAAGAACAGCTCAAGTGTTTGTTTGACAGCCT
GCAGCCTGAGAGAAGCAAATGA

hide sequence

RefSeq Acc Id:

XM_008773127 ⟹ XP_008771349

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	X	25,308,163 - 25,335,641 (-)	NCBI
mRatBN7.2	X	21,814,980 - 21,839,930 (-)	NCBI
Rnor_6.0	X	23,481,380 - 23,506,434 (-)	NCBI

Sequence:

show sequence

GACTCTAGTGCTCCTTCACAGGGTATCTTATCCTTGAGGGGAACTGTTTTAAAAAATCACTTGT
GCTATTTGAGAAGGGGGTGTAGTTCCTAATGCCTCTTTTGTTCTACAGCCTTAAAGGGCAGGTT
GTTTGTCAGCTCACAATGGCGTGGGTCTGATCTGGCAAGATCTGCAAACATTCTCATTGTTTAT
TGTTCTGTCTAAAGATGAAAAATCATGCAAATCGGGGTTCAGATTCTGGATGGAGCGCTCTGTA
AGCATGCACACATGTGAGAGGGGGCATATTTGTCCATGCTGCGTGCATGTTTAAGGACACAGAC
AGTTTTTGCAGCCTTGATTTTTAAAGCTAGATGAAAGCACATTGAAACTGAAAGCTGCCGTTCC
TAACTGGTGGCACTGGTAGCCCTTGCTGTGTGGAAAAATTGCTCTGTGTGAGTTCTGCACATGG
ATGAGCGGAGTATGCAGGAAGGAGGAATCTGTGAAGACCTGTCTGCATTGCCGTTTCTTTTTCA
ATAGCCATAAGATGCAGGCATTCTCACTCCTGAGACACTGAGTGTGGACACTGAAAAAAATGCT
CCTCTGTGCTCAGCAGTGCCCAGCCGCAAGACAGCCAGCATGTGAATGAGGACCCAACTTCCCC
TCAACCAGAAGCCCAGCTCTCCTCCAAGTGTCAACACTTACAGACATCAACCATGGAAACTTCT
CGCTCCCCTTCACCTCAGTTTGCCCCACAGAAGCTGACAGACAAGCCTCCCCTGCTTATCCATG
AAGACAATTCAGCAAGAATTGAGCGGGTGATGGACAACAACACCACTGTGAAGATGGTGCCCAT
AAAAATTGTGCACTCAGAAAGCCAGCCTGAGAAGGAAAGCCGCCAGAGTCTCGCTTGCCCAGCC
GAGCTGCCCGCACTGCCCAGTGGGCTGGAGAAGGACCAGATCAAGACACTGAGTACATCAGAGC
AGTGCTACTCGCGCTTTTGTGTGTACACACGACAGGAGGTGGAAACCCCTCATAGAGCCCGCCC
TCCAGAGCCCCAGCCACCTAGCACCCCTGCACCTCCTGTCAGAGATAGCTGTTCCTCTCCTCCC
TCACTCAACTATGGGAAGGCCAAGGAGAAGACCGTGGACGACTTGAAGTCTGAAGAATTAGCCA
GAGAGATTGTGGGAAAGGACAAGTCTTTGGCTGACATCCTGGACCCCAGCGTGAAAATCAAAAC
TACCATGGATCTGATGGAGGGAATTTTCCCCAAAGATGAGTACCTCCTAGAGGAAGCTCAGCAA
CGGAGGAAGCTGCTCCCCAAAGTCCCCTCACCCAGAGTCACAGAGGACAAGAAACAGGACCCAG
GTATGCCAGGGGTTGTGTCCTTGGCCACAAATTCTACCTATTATAGCACATCAGCCCCCAAGGC
AGAACTGCTTATCAAGATGAAGGACCTACAGGAGCCTGAGGAGTATTCAGCAGGTGACTTGGAT
CATGACCTTTCCATTAAGAAGCAAGAGCTCATCGACAGTATCAGCCGCAAGCTGCAGGTGCTCC
GAGAAGCACGTGAGAGTCTGCTGGAGGACATCCAAGCCAACAATGCTCTCGGGGATGAAGTGGA
AGCCATTGTGAAAGATGTCTGCAAGCCCAATGAGTTTGACAAGTTCCGGATGTTCATTGGAGAC
CTGGACAAAGTGGTGAACCTCCTGCTGTCACTGTCAGGACGCCTGGCCCGTGTGGAAAATGCCC
TTAATAATTTAGATGACAGTCCTTCTCCTGGAGATCGGCAGTCACTGTTGGAGAAACAGAGAGT
CCTAACTCAGCAGCATGAGGATGCGAAGGAGCTTAAAGAGAACCTGGACCGTCGTGAGCGCATT
GTGTTCGACATCCTGGCCACCTACCTCAGCGAGGAGAACCTGGCTGACTATGAGCACTTCGTGA
AGATGAAGTCAGCCCTCATCATTGAGCAGCGAGAGCTGGAAGATAAAATCCACCTGGGTGAAGA
ACAGCTCAAGTGTTTGTTTGACAGCCTGCAGCCTGAGAGAAGCAAATGA

hide sequence

RefSeq Acc Id:

XM_008773128 ⟹ XP_008771350

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	X	25,308,163 - 25,336,185 (-)	NCBI
mRatBN7.2	X	21,814,980 - 21,840,470 (-)	NCBI
Rnor_6.0	X	23,481,380 - 23,508,656 (-)	NCBI

Sequence:

show sequence

AGACTTTTAGTTAATATTAATGTATTAATATTGAGGTGCTCATTAGTACAATAGGTAGTGCATC
AGTCTCAAAATATTGGTTGATTAACTGGGATAAATACATATCAGACTATTTTCCATCACAACAA
AATGATTGAAATGATGAATTTATAAAGGAAAAATGTTGCTTTGGCTTATAGTTTCAGAGGTTTC
CACCTACATTTGATTACATTGCTTTTAGGCCTCTGATGGAGCAGCACATCATGGAAGAAAGACA
TGATGGTAAAAAAAATTCATGGCAGCAGAGTGGGAGAAAGAGGGAACTGGTGTACTACAGTCTC
CTTCAAGTATATAATCCTAGTGACTTAACTTCCTTTGTGGAGGCCCTACTACCTAAAGATGCTT
CCACTTCATAGTAGGACTGTGAGAGATACATAAGATTCAAAAGACAGAATACTGTATCATACAA
ATCTGAAGCCTAGTAATAAAGGACACTTGGTCTATTATATGGGAACTCGTTCCTTTTAACATTC
TATTAATTATTTTTTTATTTGAAAATGAAATATTTGTGTTAGGGATATACCCAGTTGGTAGAAT
ACTTGATTAACACTTTAACATGTACAAGTCCCATGGGAGAGGAAGGCAAGGATGGGGATGCTAG
GGAGGTGACATCACTGTATATGATAATACATAAAATACTATGTGGACATGAAAAACAGTGGAAA
GAGTATGAGCTTTTCAATCAAAAATACAGGGTCAAATCTTTACTGTGTGTCCGGCTACCCAGAT
TTAATAACCTCTTATAAGCCTTTCTTGTAAATTTAAGCATTTAGTGGAATCCAAGTTAGTATAC
CACAGAGACATCTATATATCATTGTCCACTGAAGCACTGTTCACAGTAGCCAAATTATTAAATT
GGCCTGGGTATCCCATAAACAGAATAGTAAAGAAAAATGTAGGCTGCTGAGTATATATATTTTA
CTTGGTCACAAAGAAAAATGAAATCATGTCATTTGAAGAGAAATAGATGAAACTGGAGATCACT
GTGTTTAGTACAATAAGCTATATCAGGAAAAACTTTTTCTCGTGTGGCAGCTAGATTAAATACA
TACACATGTATATGCATATGACATGAAAGTAGTAGAAAGGTTAGTGTTTGTGAAGATGAAGGAT
AAGAAAAGGGGGTAAAGGAAGATAATAGAGTATTTGCATAAACTATGTAATTTAAATGTATAAA
ATTATAAGAATGAAACCGATAATGCTGTAAAAGTGAATATGTGCTAATAAAAAGGTAAATGCTT
AATGGATATAATGTCAATAGACTAGCAGTGTACTACATTGGCGGCTGCAAAATAGCATGTTATT
TGGTGAAATGAGCTGGAGTCTGAAATAATTACTGTGTATTGAGAAGAGCTTTATGTAAACAAGC
TGGAAAAAGAAAGCCCTGGTGGCTAAACCCAGGACTCAGATGTTGAGAGCTGTCTAGGTGGGAA
GGAGCTATGAAGAAAATTTGTGAGGGGGCAATTTCTGTTCAGCACCCATGGTTGGGGGCTGTGG
TCAGAGTGGAGGTGGGGCAGAGTCTTTAAATGCAAGTCATTGTGATGTGATGAATTGAGTGAGT
TGGGGTCAGTCTGGTTGCTTTGTCTTCTTGCCCCAGTGCCCTTGCACACAGGAAAAGTTCTGAA
ACACTTTGTTTGTTAGCTGATGGATTACATTCCTAATGAGTGTGTAATCAGTGTAAGAATATCC
ACCAACATAAAATAGGCTATTGAGTGTCTTCTTTAACTTCATTGTAGTTGTAGAGTTGGATGTG
TATGCCTGTGATAGCCTTGGTGAGAGCTCTTAAGTAGAATTCATGAATGACATTTTTGCAGAGG
GCTCTTCTTCTATATTTTCCACTTTTTAGAAAACAGAAAAAGAAAGGACCTCCCCCCGCCCCCG
TGCCTAATAGCAGTTTTAAAAAGAGAAGCCTCTTACAAATTAATCATGGGAAGTGTTGGGAATA
TTCCCTGAGACCAGATACACTGGTTTTTGGAGTTGACAGCACCTTCATAAACTTGTGCATCATA
GGCAGCAGGCTCTGATATTCCAGCTGTTGCCAGCATGCCTTCGTGACTCCACAATGCTGTAGGC
AGCAGGATTCTGCGGTGGCAGAGGCGGGCTTTGGGTCCCTGAAGCACTTAGCTGTCTTTGCAGG
CTGAATGAGCCACAGTCTACAGCAGCAAGCAGGGGTGCAGCTCCTCTGTGCTCAGCAGTGCCCA
GCCGCAAGACAGCCAGCATGTGAATGAGGACCCAACTTCCCCTCAACCAGAAGCCCAGCTCTCC
TCCAAGTGTCAACACTTACAGACATCAACCATGGAAACTTCTCGCTCCCCTTCACCTCAGTTTG
CCCCACAGAAGCTGACAGACAAGCCTCCCCTGCTTATCCATGAAGACAATTCAGCAAGAATTGA
GCGGGTGATGGACAACAACACCACTGTGAAGATGGTGCCCATAAAAATTGTGCACTCAGAAAGC
CAGCCTGAGAAGGAAAGCCGCCAGAGTCTCGCTTGCCCAGCCGAGCTGCCCGCACTGCCCAGTG
GGCTGGAGAAGGACCAGATCAAGACACTGAGTACATCAGAGCAGTGCTACTCGCGCTTTTGTGT
GTACACACGACAGGAGGTGGAAACCCCTCATAGAGCCCGCCCTCCAGAGCCCCAGCCACCTAGC
ACCCCTGCACCTCCTGTCAGAGATAGCTGTTCCTCTCCTCCCTCACTCAACTATGGGAAGGCCA
AGGAGAAGACCGTGGACGACTTGAAGTCTGAAGAATTAGCCAGAGAGATTGTGGGAAAGGACAA
GTCTTTGGCTGACATCCTGGACCCCAGCGTGAAAATCAAAACTACCATGGATCTGATGGAGGGA
ATTTTCCCCAAAGATGAGTACCTCCTAGAGGAAGCTCAGCAACGGAGGAAGCTGCTCCCCAAAG
TCCCCTCACCCAGAGTCACAGAGGACAAGAAACAGGACCCAGGTATGCCAGGGGTTGTGTCCTT
GGCCACAAATTCTACCTATTATAGCACATCAGCCCCCAAGGCAGAACTGCTTATCAAGATGAAG
GACCTACAGGAGCCTGAGGAGTATTCAGCAGGTGACTTGGATCATGACCTTTCCATTAAGAAGC
AAGAGCTCATCGACAGTATCAGCCGCAAGCTGCAGGTGCTCCGAGAAGCACGTGAGAGTCTGCT
GGAGGACATCCAAGCCAACAATGCTCTCGGGGATGAAGTGGAAGCCATTGTGAAAGATGTCTGC
AAGCCCAATGAGTTTGACAAGTTCCGGATGTTCATTGGAGACCTGGACAAAGTGGTGAACCTCC
TGCTGTCACTGTCAGGACGCCTGGCCCGTGTGGAAAATGCCCTTAATAATTTAGATGACAGTCC
TTCTCCTGGAGATCGGCAGTCACTGTTGGAGAAACAGAGAGTCCTAACTCAGCAGCATGAGGAT
GCGAAGGAGCTTAAAGAGAACCTGGACCGTCGTGAGCGCATTGTGTTCGACATCCTGGCCACCT
ACCTCAGCGAGGAGAACCTGGCTGACTATGAGCACTTCGTGAAGATGAAGTCAGCCCTCATCAT
TGAGCAGCGAGAGCTGGAAGATAAAATCCACCTGGGTGAAGAACAGCTCAAGTGTTTGTTTGAC
AGCCTGCAGCCTGAGAGAAGCAAATGA

hide sequence

RefSeq Acc Id:

XM_008773129 ⟹ XP_008771351

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	X	25,308,163 - 25,336,185 (-)	NCBI
mRatBN7.2	X	21,814,980 - 21,840,470 (-)	NCBI
Rnor_6.0	X	23,481,380 - 23,508,656 (-)	NCBI

Sequence:

show sequence

AGACTTTTAGTTAATATTAATGTATTAATATTGAGGTGCTCATTAGTACAATAGGTAGTGCATC
AGTCTCAAAATATTGGTTGATTAACTGGGATAAATACATATCAGACTATTTTCCATCACAACAA
AATGATTGAAATGATGAATTTATAAAGGAAAAATGTTGCTTTGGCTTATAGTTTCAGAGGTTTC
CACCTACATTTGATTACATTGCTTTTAGGCCTCTGATGGAGCAGCACATCATGGAAGAAAGACA
TGATGGTAAAAAAAATTCATGGCAGCAGAGTGGGAGAAAGAGGGAACTGGTGTACTACAGTCTC
CTTCAAGTATATAATCCTAGTGACTTAACTTCCTTTGTGGAGGCCCTACTACCTAAAGATGCTT
CCACTTCATAGTAGGACTGTGAGAGATACATAAGATTCAAAAGACAGAATACTGTATCATACAA
ATCTGAAGCCTAGTAATAAAGGACACTTGGTCTATTATATGGGAACTCGTTCCTTTTAACATTC
TATTAATTATTTTTTTATTTGAAAATGAAATATTTGTGTTAGGGATATACCCAGTTGGTAGAAT
ACTTGATTAACACTTTAACATGTACAAGTCCCATGGGAGAGGAAGGCAAGGATGGGGATGCTAG
GGAGGTGACATCACTGTATATGATAATACATAAAATACTATGTGGACATGAAAAACAGTGGAAA
GAGTATGAGCTTTTCAATCAAAAATACAGGGTCAAATCTTTACTGTGTGTCCGGCTACCCAGAT
TTAATAACCTCTTATAAGCCTTTCTTGTAAATTTAAGCATTTAGTGGAATCCAAGTTAGTATAC
CACAGAGACATCTATATATCATTGTCCACTGAAGCACTGTTCACAGTAGCCAAATTATTAAATT
GGCCTGGGTATCCCATAAACAGAATAGTAAAGAAAAATGTAGGCTGCTGAGTATATATATTTTA
CTTGGTCACAAAGAAAAATGAAATCATGTCATTTGAAGAGAAATAGATGAAACTGGAGATCACT
GTGTTTAGTACAATAAGCTATATCAGGAAAAACTTTTTCTCGTGTGGCAGCTAGATTAAATACA
TACACATGTATATGCATATGACATGAAAGTAGTAGAAAGGTTAGTGTTTGTGAAGATGAAGGAT
AAGAAAAGGGGGTAAAGGAAGATAATAGAGTATTTGCATAAACTATGTAATTTAAATGTATAAA
ATTATAAGAATGAAACCGATAATGCTGTAAAAGTGAATATGTGCTAATAAAAAGGTAAATGCTT
AATGGATATAATGTCAATAGACTAGCAGTGTACTACATTGGCGGCTGCAAAATAGCATGTTATT
TGGTGAAATGAGCTGGAGTCTGAAATAATTACTGTGTATTGAGAAGAGCTTTATGTAAACAAGC
TGGAAAAAGAAAGCCCTGGTGGCTAAACCCAGGACTCAGATGTTGAGAGCTGTCTAGGTGGGAA
GGAGCTATGAAGAAAATTTGTGAGGGGGCAATTTCTGTTCAGCACCCATGGTTGGGGGCTGTGG
TCAGAGTGGAGGTGGGGCAGAGTCTTTAAATGCAAGTCATTGTGATGTGATGAATTGAGTGAGT
TGGGGTCAGTCTGGTTGCTTTGTCTTCTTGCCCCAGTGCCCTTGCACACAGGAAAAGTTCTGAA
ACACTTTGTTTGTTAGCTGATGGATTACATTCCTAATGAGTGTGTAATCAGTGTAAGAATATCC
ACCAACATAAAATAGGCTATTGAGTGTCTTCTTTAACTTCATTGTAGTTGTAGAGTTGGATGTG
TATGCCTGTGATAGCCTTGGTGAGAGCTCTTAAGTAGAATTCATGAATGACATTTTTGCAGAGG
GCTCTTCTTCTATATTTTCCACTTTTTAGAAAACAGAAAAAGAAAGGACCTCCCCCCGCCCCCG
TGCCTAATAGCAGTTTTAAAAAGAGAAGCCTCTTACAAATTAATCATGGGAAGTGTTGGGAATA
TTCCCTGAGACCAGATACACTGGTTTTTGGAGTTGACAGCACCTTCATAAACTTGTGCATCATA
GGCAGCAGGCTCTGATATTCCAGCTGTTGCCAGCATGCCTTCGTGACTCCACAATGCTGTAGGC
AGCAGGATTCTGCGGTGGCAGAGGCGGGCTTTGGGTCCCTGAAGCACTTAGCTGTCTTTGCAGG
CTGAATGAGCCACAGTCTACAGCAGCAAGCAGGGGTGCAGTGCCCAGCCGCAAGACAGCCAGCA
TGTGAATGAGGACCCAACTTCCCCTCAACCAGAAGCCCAGCTCTCCTCCAAGTGTCAACACTTA
CAGACATCAACCATGGAAACTTCTCGCTCCCCTTCACCTCAGTTTGCCCCACAGAAGCTGACAG
ACAAGCCTCCCCTGCTTATCCATGAAGACAATTCAGCAAGAATTGAGCGGGTGATGGACAACAA
CACCACTGTGAAGATGGTGCCCATAAAAATTGTGCACTCAGAAAGCCAGCCTGAGAAGGAAAGC
CGCCAGAGTCTCGCTTGCCCAGCCGAGCTGCCCGCACTGCCCAGTGGGCTGGAGAAGGACCAGA
TCAAGACACTGAGTACATCAGAGCAGTGCTACTCGCGCTTTTGTGTGTACACACGACAGGAGGT
GGAAACCCCTCATAGAGCCCGCCCTCCAGAGCCCCAGCCACCTAGCACCCCTGCACCTCCTGTC
AGAGATAGCTGTTCCTCTCCTCCCTCACTCAACTATGGGAAGGCCAAGGAGAAGACCGTGGACG
ACTTGAAGTCTGAAGAATTAGCCAGAGAGATTGTGGGAAAGGACAAGTCTTTGGCTGACATCCT
GGACCCCAGCGTGAAAATCAAAACTACCATGGATCTGATGGAGGGAATTTTCCCCAAAGATGAG
TACCTCCTAGAGGAAGCTCAGCAACGGAGGAAGCTGCTCCCCAAAGTCCCCTCACCCAGAGTCA
CAGAGGACAAGAAACAGGACCCAGGTATGCCAGGGGTTGTGTCCTTGGCCACAAATTCTACCTA
TTATAGCACATCAGCCCCCAAGGCAGAACTGCTTATCAAGATGAAGGACCTACAGGAGCCTGAG
GAGTATTCAGCAGGTGACTTGGATCATGACCTTTCCATTAAGAAGCAAGAGCTCATCGACAGTA
TCAGCCGCAAGCTGCAGGTGCTCCGAGAAGCACGTGAGAGTCTGCTGGAGGACATCCAAGCCAA
CAATGCTCTCGGGGATGAAGTGGAAGCCATTGTGAAAGATGTCTGCAAGCCCAATGAGTTTGAC
AAGTTCCGGATGTTCATTGGAGACCTGGACAAAGTGGTGAACCTCCTGCTGTCACTGTCAGGAC
GCCTGGCCCGTGTGGAAAATGCCCTTAATAATTTAGATGACAGTCCTTCTCCTGGAGATCGGCA
GTCACTGTTGGAGAAACAGAGAGTCCTAACTCAGCAGCATGAGGATGCGAAGGAGCTTAAAGAG
AACCTGGACCGTCGTGAGCGCATTGTGTTCGACATCCTGGCCACCTACCTCAGCGAGGAGAACC
TGGCTGACTATGAGCACTTCGTGAAGATGAAGTCAGCCCTCATCATTGAGCAGCGAGAGCTGGA
AGATAAAATCCACCTGGGTGAAGAACAGCTCAAGTGTTTGTTTGACAGCCTGCAGCCTGAGAGA
AGCAAATGA

hide sequence

RefSeq Acc Id:

XM_008773130 ⟹ XP_008771352

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	X	25,308,163 - 25,336,185 (-)	NCBI
mRatBN7.2	X	21,814,980 - 21,840,470 (-)	NCBI
Rnor_6.0	X	23,481,380 - 23,508,656 (-)	NCBI

Sequence:

show sequence

AGACTTTTAGTTAATATTAATGTATTAATATTGAGGTGCTCATTAGTACAATAGGTAGTGCATC
AGTCTCAAAATATTGGTTGATTAACTGGGATAAATACATATCAGACTATTTTCCATCACAACAA
AATGATTGAAATGATGAATTTATAAAGGAAAAATGTTGCTTTGGCTTATAGTTTCAGAGGTTTC
CACCTACATTTGATTACATTGCTTTTAGGCCTCTGATGGAGCAGCACATCATGGAAGAAAGACA
TGATGGTAAAAAAAATTCATGGCAGCAGAGTGGGAGAAAGAGGGAACTGGTGTACTACAGTCTC
CTTCAAGTATATAATCCTAGTGACTTAACTTCCTTTGTGGAGGCCCTACTACCTAAAGATGCTT
CCACTTCATAGTAGGACTGTGAGAGATACATAAGATTCAAAAGACAGAATACTGTATCATACAA
ATCTGAAGCCTAGTAATAAAGGACACTTGGTCTATTATATGGGAACTCGTTCCTTTTAACATTC
TATTAATTATTTTTTTATTTGAAAATGAAATATTTGTGTTAGGGATATACCCAGTTGGTAGAAT
ACTTGATTAACACTTTAACATGTACAAGTCCCATGGGAGAGGAAGGCAAGGATGGGGATGCTAG
GGAGGTGACATCACTGTATATGATAATACATAAAATACTATGTGGACATGAAAAACAGTGGAAA
GAGTATGAGCTTTTCAATCAAAAATACAGGGTCAAATCTTTACTGTGTGTCCGGCTACCCAGAT
TTAATAACCTCTTATAAGCCTTTCTTGTAAATTTAAGCATTTAGTGGAATCCAAGTTAGTATAC
CACAGAGACATCTATATATCATTGTCCACTGAAGCACTGTTCACAGTAGCCAAATTATTAAATT
GGCCTGGGTATCCCATAAACAGAATAGTAAAGAAAAATGTAGGCTGCTGAGTATATATATTTTA
CTTGGTCACAAAGAAAAATGAAATCATGTCATTTGAAGAGAAATAGATGAAACTGGAGATCACT
GTGTTTAGTACAATAAGCTATATCAGGAAAAACTTTTTCTCGTGTGGCAGCTAGATTAAATACA
TACACATGTATATGCATATGACATGAAAGTAGTAGAAAGGTTAGTGTTTGTGAAGATGAAGGAT
AAGAAAAGGGGGTAAAGGAAGATAATAGAGTATTTGCATAAACTATGTAATTTAAATGTATAAA
ATTATAAGAATGAAACCGATAATGCTGTAAAAGTGAATATGTGCTAATAAAAAGGTAAATGCTT
AATGGATATAATGTCAATAGACTAGCAGTGTACTACATTGGCGGCTGCAAAATAGCATGTTATT
TGGTGAAATGAGCTGGAGTCTGAAATAATTACTGTGTATTGAGAAGAGCTTTATGTAAACAAGC
TGGAAAAAGAAAGCCCTGGTGGCTAAACCCAGGACTCAGATGTTGAGAGCTGTCTAGGTGGGAA
GGAGCTATGAAGAAAATTTGTGAGGGGGCAATTTCTGTTCAGCACCCATGGTTGGGGGCTGTGG
TCAGAGTGGAGGTGGGGCAGAGTCTTTAAATGCAAGTCATTGTGATGTGATGAATTGAGTGAGT
TGGGGTCAGTCTGGTTGCTTTGTCTTCTTGCCCCAGTGCCCTTGCACACAGGAAAAGTTCTGAA
ACACTTTGTTTGTTAGCTGATGGATTACATTCCTAATGAGTGTGTAATCAGTGTAAGAATATCC
ACCAACATAAAATAGGCTATTGAGTGTCTTCTTTAACTTCATTGTAGTTGTAGAGTTGGATGTG
TATGCCTGTGATAGCCTTGGTGAGAGCTCTTAAGTAGAATTCATGAATGACATTTTTGCAGAGG
GCTCTTCTTCTATATTTTCCACTTTTTAGAAAACAGAAAAAGAAAGGACCTCCCCCCGCCCCCG
TGCCTAATAGCAGTTTTAAAAAGAGAAGCCTCTTACAAATTAATCATGGGAAGTGTTGGGAATA
TTCCCTGAGACCAGATACACTGGTTTTTGGAGTTGACAGCACCTTCATAAACTTGTGCATCATA
GGCAGCAGGCTCTGATATTCCAGCTGTTGCCAGCATGCCTTCGTGACTCCACAATGCTGTAGGC
AGCAGGATTCTGCGGTGGCAGAGGCGGGCTTTGGGTCCCTGAAGCACTTAGCTGTCTTTGCAGG
CTGAATGAGCCACAGTCTACAGCAGCAAGCAGGGGTGCAGCAGTGCCCAGCCGCAAGACAGCCA
GCATGTGAATGAGGACCCAACTTCCCCTCAACCAGAAGCCCAGCTCTCCTCCAAGTGTCAACAC
TTACAGACATCAACCATGGAAACTTCTCGCTCCCCTTCACCTCAGTTTGCCCCACAGAAGCTGA
CAGACAAGCCTCCCCTGCTTATCCATGAAGACAATTCAGCAAGAATTGAGCGGGTGATGGACAA
CAACACCACTGTGAAGATGGTGCCCATAAAAATTGTGCACTCAGAAAGCCAGCCTGAGAAGGAA
AGCCGCCAGAGTCTCGCTTGCCCAGCCGAGCTGCCCGCACTGCCCAGTGGGCTGGAGAAGGACC
AGATCAAGACACTGAGTACATCAGAGCAGTGCTACTCGCGCTTTTGTGTGTACACACGACAGGA
GGTGGAAACCCCTCATAGAGCCCGCCCTCCAGAGCCCCAGCCACCTAGCACCCCTGCACCTCCT
GTCAGAGATAGCTGTTCCTCTCCTCCCTCACTCAACTATGGGAAGGCCAAGGAGAAGACCGTGG
ACGACTTGAAGTCTGAAGAATTAGCCAGAGAGATTGTGGGAAAGGACAAGTCTTTGGCTGACAT
CCTGGACCCCAGCGTGAAAATCAAAACTACCATGGATCTGATGGAGGGAATTTTCCCCAAAGAT
GAGTACCTCCTAGAGGAAGCTCAGCAACGGAGGAAGCTGCTCCCCAAAGTCCCCTCACCCAGAG
TCACAGAGGACAAGAAACAGGACCCAGGTATGCCAGGGGTTGTGTCCTTGGCCACAAATTCTAC
CTATTATAGCACATCAGCCCCCAAGGCAGAACTGCTTATCAAGATGAAGGACCTACAGGAGCCT
GAGGAGTATTCAGCAGGTGACTTGGATCATGACCTTTCCATTAAGAAGCAAGAGCTCATCGACA
GTATCAGCCGCAAGCTGCAGGTGCTCCGAGAAGCACGTGAGAGTCTGCTGGAGGACATCCAAGC
CAACAATGCTCTCGGGGATGAAGTGGAAGCCATTGTGAAAGATGTCTGCAAGCCCAATGAGTTT
GACAAGTTCCGGATGTTCATTGGAGACCTGGACAAAGTGGTGAACCTCCTGCTGTCACTGTCAG
GACGCCTGGCCCGTGTGGAAAATGCCCTTAATAATTTAGATGACAGTCCTTCTCCTGGAGATCG
GCAGTCACTGTTGGAGAAACAGAGAGTCCTAACTCAGCAGCATGAGGATGCGAAGGAGCTTAAA
GAGAACCTGGACCGTCGTGAGCGCATTGTGTTCGACATCCTGGCCACCTACCTCAGCGAGGAGA
ACCTGGCTGACTATGAGCACTTCGTGAAGATGAAGTCAGCCCTCATCATTGAGCAGCGAGAGCT
GGAAGATAAAATCCACCTGGGTGAAGAACAGCTCAAGTGTTTGTTTGACAGCCTGCAGCCTGAG
AGAAGCAAATGA

hide sequence

RefSeq Acc Id:

XM_008773131 ⟹ XP_008771353

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	X	25,308,163 - 25,335,641 (-)	NCBI
mRatBN7.2	X	21,812,474 - 21,839,603 (-)	NCBI
Rnor_6.0	X	23,478,874 - 23,506,001 (-)	NCBI

Sequence:

show sequence

GAGTTCTGCACATGGATGAGCGGAGTATGCAGGAAGGAGGAATCTGTGAAGACCTGTCTGCATT
GCCGTTTCTTTTTCAATAGCCATAAGATGCAGGCATTCTCACTCCTGAGACACTGAGTGTGGAC
ACTGAAAAAAATGTGCCCAGCCGCAAGACAGCCAGCATGTGAATGAGGACCCAACTTCCCCTCA
ACCAGAAGCCCAGCTCTCCTCCAAGTGTCAACACTTACAGACATCAACCATGGAAACTTCTCGC
TCCCCTTCACCTCAGTTTGCCCCACAGAAGCTGACAGACAAGCCTCCCCTGCTTATCCATGAAG
ACAATTCAGCAAGAATTGAGCGGGTGATGGACAACAACACCACTGTGAAGATGGTGCCCATAAA
AATTGTGCACTCAGAAAGCCAGCCTGAGAAGGAAAGCCGCCAGAGTCTCGCTTGCCCAGCCGAG
CTGCCCGCACTGCCCAGTGGGCTGGAGAAGGACCAGATCAAGACACTGAGTACATCAGAGCAGT
GCTACTCGCGCTTTTGTGTGTACACACGACAGGAGGTGGAAACCCCTCATAGAGCCCGCCCTCC
AGAGCCCCAGCCACCTAGCACCCCTGCACCTCCTGTCAGAGATAGCTGTTCCTCTCCTCCCTCA
CTCAACTATGGGAAGGCCAAGGAGAAGACCGTGGACGACTTGAAGTCTGAAGAATTAGCCAGAG
AGATTGTGGGAAAGGACAAGTCTTTGGCTGACATCCTGGACCCCAGCGTGAAAATCAAAACTAC
CATGGATCTGATGGAGGGAATTTTCCCCAAAGATGAGTACCTCCTAGAGGAAGCTCAGCAACGG
AGGAAGCTGCTCCCCAAAGTCCCCTCACCCAGAGTCACAGAGGACAAGAAACAGGACCCAGGTA
TGCCAGGGGTTGTGTCCTTGGCCACAAATTCTACCTATTATAGCACATCAGCCCCCAAGGCAGA
ACTGCTTATCAAGATGAAGGACCTACAGGAGCCTGAGGAGTATTCAGCAGGTGACTTGGATCAT
GACCTTTCCATTAAGAAGCAAGAGCTCATCGACAGTATCAGCCGCAAGCTGCAGGTGCTCCGAG
AAGCACGTGAGAGTCTGCTGGAGGACATCCAAGCCAACAATGCTCTCGGGGATGAAGTGGAAGC
CATTGTGAAAGATGTCTGCAAGCCCAATGAGTTTGACAAGTTCCGGATGTTCATTGGAGACCTG
GACAAAGTGGTGAACCTCCTGCTGTCACTGTCAGGACGCCTGGCCCGTGTGGAAAATGCCCTTA
ATAATTTAGATGACAGTCCTTCTCCTGGAGATCGGCAGTCACTGTTGGAGAAACAGAGAGTCCT
AACTCAGCAGCATGAGGATGCGAAGGAGCTTAAAGAGAACCTGGACCGTCGTGAGCGCATTGTG
TTCGACATCCTGGCCACCTACCTCAGCGAGGAGAACCTGGCTGACTATGAGCACTTCGTGAAGA
TGAAGTCAGCCCTCATCATTGAGCAGCGAGAGCTGGAAGATAAAATCCACCTGGGTGAAGAACA
GCTCAAGTGTTTGTTTGACAGCCTGCAGCCTGAGAGAAGCAAATGAGCGACCCATTCCTGCAGA
AGGCAGACACAGAGCCTTGGAGATTAATGCCTAGGACTACAAGAGTGAACCCAAGCCTATTTGC
CCATCTCTGGAGACTCACACTCTGGAGCCACAAGGCTAGTAAAAAAGCAATAATGTCCTGCTAG
TATGTGATGCTTTATTTATGATTTTCATTTCTGTTGGTTTGCTGAACATAGTTTCTCGTATCAC
ATGTGATGTCAGAAAATGCCAGGTTTTGCTAGTCAACAAGGGTTCCCTAGCACTCCTTCACAGC
AGTGGCACCATTGTTCCTTCCTTGTATAGATGCCAAATACATCCCTATGGTGCATGAGAGGAAA
GACCCTTGTCATTTAGCCAGGCATGGGCTGCTGTGTTTTCTGTCCTTATTCATTTAACAATGTG
AGCATTCATCATTCTGTCATCATGACATTCTCTGACCCAGTAAAAATCAGTGATGATAATTTAT
TGATGTGTGAAAAACATGAACAGTTTCCTAGTAGTTAAAAACTAACTTTAAAATGAACAACCTA
CATATTGAATTCATTCATTCCAAGATTAAAATGATCACATAAATTGTGTGCATATTTTGAAACA
CCCCATATAGCTAGTATCCTTCTTGCCACATCTTAAATAATTTCTACCCAAGTGATATTAATTG
GTCAAAAGTGTGTCTACTAACAGTGTTATTGCTTGCTCTTTATTTCCTGAGACCAATGAAATAT
TTTGAAGTTTCCTTCCCCAGAACACTAATTTGTGTACATGATCATTAATAATGCATGATCTTTA
ATGATAATCAGTGGTTTATCTCTTTTTTTATCTGTTACCATGGGCCACATGCCACGTACCTTAA
GACTTAAGATTCCATCCAATGGTCAGAGGTCCTGTGCAGTGACTAGTGCTTACATTTGAAACAG
AGTTTTGTCCTTGACAAATAGAGTGTTACTCATTAAAGCTACAATGCCATCCTGTTGGTTTCCA
GTTGACAGGACAGAGATCGGGAAAAGACATTTGTAAATGGTGTCTGACTTGTTGCTCCTTTTGT
GTTTGCTATTTGTTTTAGAAGAGTCTAACCCAGATTGGCTTCAAACTCCCTATGTAGTCCAGTG
ACCTTGAACTCCTGGTCCTCTTGCCTCTACTTCCTAATTTCTGGGTTTAGCAGCATATCCTACT
TCATGGCTTCATACATCTGATAAAGGATCTGTATAAAGAACTTCCAACACCCAATAGTAGGAAT
GGTTTGAAAAAAAAGTGGGCAAAAGACTTGACTAGACACTTCACCAAAGAGGATATATGTATGG
CAGATAAACACATGAAAAATGTTCAGTTACCAGTGGCGTGTATAGCTTATGTTAAGTGTTTGTA
GATTTGGTGTAGTTCAAATGCTGTTTATGTAACTAAATGCATGGTGAGTGATGAGCAAGTCCTC
CTGGTGACTTGATATGTAGGCATCACTAGTCTTTGTTCTATCAAGGGATCATTTAATTCATATT
TTCCCCAGAGATTGCAGCAGATACAAAGATTTCCCTCTCTAAGCAGTAGCCACACCTTTTCCAA
AATACACATGCATACTTACATCCATGTGTATGTGCATGTGTTCACACTCCCACACAGAGTTGTC
TTAAAGGACCAGAATCCATGCTTCTTGAGCCAGAGGAACAGATATTGACAGCATAAGCTCTGGT
GAAGATGACAGTGTCCTCCAAACAGCTGAGTCAAGATGGGCGAGCTTCTGTACTGCAGACCATG
GATGGCATGGTTGAATGCGTATCACTGTTAGTCAAAAGGAGATCTTGCAAAAGTGTCGATTCCT
ATTAATTCCTATTAAATGAAGCTACGTCTACCTTTTGAAGTCCCTGATCTGCCACTGCAGCCTC
TTCCTCCTTCCAGTTCGTCATCCCTTGCTGTGAATGTGGATCATGTCAGAAAACATGATGCTGG
CTCTCCACAAACTTTCCAAGGAATTGCAGACTATTTTGTTTTTAATTTACACCAAGCTATTTAC
CTGTGGTTCTTTATCCCCAAATACAGTGTTGTGGACATTTTAATGATGTGTATAACATGTGAGT
AATGGAACTTTGTTTGTCTGTAACCTGCCTTTTCATGTTGCTTCAAGATTGTTATGGGAAACAG
TACGTAGTGCTCAAGCATGCTTGTAATGAAACACATAACAATTATGACCTTCCTATCCATTCCC
TGCTTGCCTGTTCCATGTCTGATTAGCAGGGATCCAAGAATTCCAGAGAGTCCATATACATATG
TCTATGAATTGTGATATTACTGCATAAGAAACAATCTGGTGCTAATGGTTGGTCCTTGGCATGC
AAAGGCGTGGGCATGGGCACAGCTATGGAACTCTCTGTACATATACTGACCTTGCCTGTGGTCA
GCTTTTGTGACTTTACCCTGAACTCTACCCTGGCAAATATGCACATTGATGCTTGATGCTTACC
ACTTATCAACAGATCCTCTTGCTTGACCTTAACAAAATAAATAGTGTCTCTTCAAA

hide sequence

Protein Sequences


Protein RefSeqs	NP_001041358	(Get FASTA)	NCBI Sequence Viewer
	NP_001421113	(Get FASTA)	NCBI Sequence Viewer
	NP_001421114	(Get FASTA)	NCBI Sequence Viewer
	NP_001421115	(Get FASTA)	NCBI Sequence Viewer
	NP_001421116	(Get FASTA)	NCBI Sequence Viewer
	NP_001421117	(Get FASTA)	NCBI Sequence Viewer
	NP_001421118	(Get FASTA)	NCBI Sequence Viewer
	NP_001421119	(Get FASTA)	NCBI Sequence Viewer
	XP_006256878	(Get FASTA)	NCBI Sequence Viewer
	XP_006256879	(Get FASTA)	NCBI Sequence Viewer
	XP_008771348	(Get FASTA)	NCBI Sequence Viewer
	XP_008771349	(Get FASTA)	NCBI Sequence Viewer
	XP_008771350	(Get FASTA)	NCBI Sequence Viewer
	XP_008771351	(Get FASTA)	NCBI Sequence Viewer
	XP_008771352	(Get FASTA)	NCBI Sequence Viewer
	XP_008771353	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAK15769	(Get FASTA)	NCBI Sequence Viewer
	AAP92614	(Get FASTA)	NCBI Sequence Viewer
	EDL90605	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000042259.1
	ENSRNOP00000083830
	ENSRNOP00000105757
GenBank Protein	Q7TP36	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:

NP_001041358 ⟸ NM_001047893

- UniProtKB:

D4A053 (UniProtKB/TrEMBL), A0A8I6A0R5 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MEGAEPRARPERLAEAEARATDGVRLVEVQLSGGAPWGFTLKGGREHGEPLVITKIEEGSKAAS
VDKLLAGDEIVAINDVTLSGFRQEAICLVKGSHKTLKLVVKRKSDPSWRPHSWHATKYFDVHPE
PPVSLFLNSSSSPSWKSQHQASSSSHDLSGSWEHTSLQRTSDHFSSMGSIDSLDHSSQLYPSGH
LSSAKSNSSIDHLGGHSKRDSAYGSFSTCSSTPDHTLPKADASSTENILYKVGLWEASRPGSSR
QSQSTGDPQGLQDRPSSFLPRVPGNSSKSPRPEDNIEPKIATSGRSNFGPVWYVPDKKKAPSPP
PLGLPLRSDSFAVAARGHEKARGPPFSDLASMQHFTTLPHVQPRGDRRMETTDRQWKLAHPSSG
KEIGNVGYQPEGHLDCRWLCSDDRAGRPSGAPGRHQFSLSSTDVHFLKSYHGSQHPQPCSDESP
RFPSSPRELLRITPSGCLQEPPELSQDDNPAQVRWPGSVNQKLDDRGRSHYFSVPHRQPVHGSA
HVLIPRSDYWHSDTTPVDLECPLLRPDQRGYPQQYEETPASHERGGYQQLNAGIEGCCSGIHEP
PRASHTVRAGLQCPGNDFKLVDAESGRISRQRTPMLHSLTQDGAWRPGNSKDCGNEKPPLLDAQ
VGKPTRRSDRFATTLRNEIQMRRAKLQKSKSTVTLAGDSEAEDCAGDWRVDVGAVPEGSFPSTY
KEHLKEAQTRVLKATSFQRRDLDPTPADQYPGPPEHRTCDHSASSSLSSFPGEPDSAPRLCEAG
LAKPPSSAGGVPHILRIGGRKRFTAEQKLKSYSEPEKINEVGLSGDHSPHPTIRTSEDSVGTFA
DRWKFFEETSKSLLQKPGHRQAFCGIPREKAERPQTQGHECESTEPWFQKRSRATSCGEILSED
RKVEKASEKLNPPRRLGTFAEYQASWKEQKKSLEARSSGRYHSADDILDAGLDQQQRPQYIHER
SRSSPSTDHYSQEVPVEPNRQAEDSGGQKEALLCTLQAEEGCSAPSSSVLSSAQPQDSQHVNED
PTSPQPEAQLSSKCQHLQTSTMETSRSPSPQFAPQKLTDKPPLLIHEDNSARIERVMDNNTTVK
MVPIKIVHSESQPEKESRQSLACPAELPALPSGLEKDQIKTLSTSEQCYSRFCVYTRQEVETPH
RARPPEPQPPSTPAPPVRDSCSSPPSLNYGKAKEKTVDDLKSEELAREIVGKDKSLADILDPSV
KIKTTMDLMEGIFPKDEYLLEEAQQRRKLLPKVPSPRVTEDKKQDPGMPGVVSLATNSTYYSTS
APKAELLIKMKDLQEPEEYSAGDLDHDLSIKKQELIDSISRKLQVLREARESLLEDIQANNALG
DEVEAIVKDVCKPNEFDKFRMFIGDLDKVVNLLLSLSGRLARVENALNNLDDSPSPGDRQSLLE
KQRVLTQQHEDAKELKENLDRRERIVFDILATYLSEENLADYEHFVKMKSALIIEQRELEDKIH
LGEEQLKCLFDSLQPERSK

hide sequence

RefSeq Acc Id:

XP_006256879 ⟸ XM_006256817

- Peptide Label:

isoform X2

- Sequence:

show sequence

MEGAEPRARPERLAEAEARATDGVRLVEVQLSGGAPWGFTLKGGREHGEPLVITKIEEGSKAAS
VDKLLAGDEIVAINDVTLSGFRQEAICLVKGSHKTLKLVVKRKSDPSWRPHSWHATKYFDVHPE
PPVSLFLNSSSSPSWKSQHQASSSSHDLSGSWEHTSLQRTSDHFSSMGSIDSLDHSSQLYPSGH
LSSAKSNSSIDHLGGHSKRDSAYGSFSTCSSTPDHTLPKADASSTENILYKVGLWEASRPGSSR
QSQSTGDPQGLQDRPSSFLPRVPGNSSKSPRPEDNIEPKIATSGRSNFGPVWYVPDKKKAPSPP
PLGLPLRSDSFAVAARGHEKARGPPFSDLASMQHFTTLPHVQPRGDRRMETTDRQWKLAHPSSG
KEIGNVGYQPEGHLDCRWLCSDDRAGRPSGAPGRHQFSLSSTDVHFLKSYHGSQHPQPCSDESP
RFPSSPRELLRITPSGCLQEPPELSQDDNPAQVRWPGSVNQKLDDRGRSHYFSVPHRQPVHGSA
HVLIPRSDYWHSDTTPVDLECPLLRPDQRGYPQQYEETPASHERGGYQQLNAGIEGCCSGIHEP
PRASHTVRAGLQCPGNDFKLVDAESGRISRQRTPMLHSLTQDGAWRPGNSKDCGNEKPPLLDAQ
VGKPTRRSDRFATTLRNEIQMRRAKLQKSKSTVTLAGDSEAEDCAGDWRVDVGAVPEGSFPSTY
KEHLKEAQTRVLKATSFQRRDLDPTPADQYPGPPEHRTCDHSASSSLSSFPGEPDSAPRLCEAG
LAKPPSSAGGVPHILRIGGRKRFTAEQKLKSYSEPEKINEVGLSGDHSPHPTIRTSEDSVGTFA
DRWKFFEETSKSLLQKPGHRQAFCGIPREKAERPQTQGHECESTEPWFQKRSRATSCGEILSED
RKVEKASEKLNPPRRLGTFAEYQASWKEQKKSLEARSSGRYHSADDILDAGLDQQQRPQYIHER
SRSSPSTDHYSQEVPVEPNRQAEDSGGQKEALLCTLQAEEGCSAPSAQPQDSQHVNEDPTSPQP
EAQLSSKCQHLQTSTMETSRSPSPQFAPQKLTDKPPLLIHEDNSARIERVMDNNTTVKMVPIKI
VHSESQPEKESRQSLACPAELPALPSGLEKDQIKTLSTSEQCYSRFCVYTRQEVETPHRARPPE
PQPPSTPAPPVRDSCSSPPSLNYGKAKEKTVDDLKSEELAREIVGKDKSLADILDPSVKIKTTM
DLMEGIFPKDEYLLEEAQQRRKLLPKVPSPRVTEDKKQDPGMPGVVSLATNSTYYSTSAPKAEL
LIKMKDLQEPEEYSAGDLDHDLSIKKQELIDSISRKLQVLREARESLLEDIQANNALGDEVEAI
VKDVCKPNEFDKFRMFIGDLDKVVNLLLSLSGRLARVENALNNLDDSPSPGDRQSLLEKQRVLT
QQHEDAKELKENLDRRERIVFDILATYLSEENLADYEHFVKMKSALIIEQRELEDKIHLGEEQL
KCLFDSLQPERSK

hide sequence

RefSeq Acc Id:

XP_006256878 ⟸ XM_006256816

- Peptide Label:

isoform X1

- Sequence:

show sequence

MEGAEPRARPERLAEAEARATDGVRLVEVQLSGGAPWGFTLKGGREHGEPLVITKIEEGSKAAS
VDKLLAGDEIVAINDVTLSGFRQEAICLVKGSHKTLKLVVKRKSDPSWRPHSWHATKYFDVHPE
PPVSLFLNSSSSPSWKSQHQASSSSHDLSGSWEHTSLQRTSDHFSSMGSIDSLDHSSQLYPSGH
LSSAKSNSSIDHLGGHSKRDSAYGSFSTCSSTPDHTLPKADASSTENILYKVGLWEASRPGSSR
QSQSTGDPQGLQDRPSSFLPRVPGNSSKSPRPEDNIEPKIATSGRSNFGPVWYVPDKKKAPSPP
PLGLPLRSDSFAVAARGHEKARGPPFSDLASMQHFTTLPHVQPRGDRRMETTDRQWKLAHPSSG
KEIGNVGYQPEGHLDCRWLCSDDRAGRPSGAPGRHQFSLSSTDVHFLKSYHGSQHPQPCSDESP
RFPSSPRELLRITPSGCLQEPPELSQDDNPAQVRWPGSVNQKLDDRGRSHYFSVPHRQPVHGSA
HVLIPRSDYWHSDTTPVDLECPLLRPDQRGYPQQYEETPASHERGGYQQLNAGIEGCCSGIHEP
PRASHTVRAGLQCPGNDFKLVDAESGRISRQRTPMLHSLTQDGAWRPGNSKDCGNEKPPLLDAQ
VGKPTRRSDRFATTLRNEIQMRRAKLQKSKSTVTLAGDSEAEDCAGDWRVDVGAVPEGSFPSTY
KEHLKEAQTRVLKATSFQRRDLDPTPADQYPGPPEHRTCDHSASSSLSSFPGEPDSAPRLCEAG
LAKPPSSAGGVPHILRIGGRKRFTAEQKLKSYSEPEKINEVGLSGDHSPHPTIRTSEDSVGTFA
DRWKFFEETSKSLLQKPGHRQAFCGIPREKAERPQTQGHECESTEPWFQKRSRATSCGEILSED
RKVEKASEKLNPPRRLGTFAEYQASWKEQKKSLEARSSGRYHSADDILDAGLDQQQRPQYIHER
SRSSPSTDHYSQEVPVEPNRQAEDSGGQKEALLCTLQAEEGCSAPSSAQPQDSQHVNEDPTSPQ
PEAQLSSKCQHLQTSTMETSRSPSPQFAPQKLTDKPPLLIHEDNSARIERVMDNNTTVKMVPIK
IVHSESQPEKESRQSLACPAELPALPSGLEKDQIKTLSTSEQCYSRFCVYTRQEVETPHRARPP
EPQPPSTPAPPVRDSCSSPPSLNYGKAKEKTVDDLKSEELAREIVGKDKSLADILDPSVKIKTT
MDLMEGIFPKDEYLLEEAQQRRKLLPKVPSPRVTEDKKQDPGMPGVVSLATNSTYYSTSAPKAE
LLIKMKDLQEPEEYSAGDLDHDLSIKKQELIDSISRKLQVLREARESLLEDIQANNALGDEVEA
IVKDVCKPNEFDKFRMFIGDLDKVVNLLLSLSGRLARVENALNNLDDSPSPGDRQSLLEKQRVL
TQQHEDAKELKENLDRRERIVFDILATYLSEENLADYEHFVKMKSALIIEQRELEDKIHLGEEQ
LKCLFDSLQPERSK

hide sequence

RefSeq Acc Id:	XP_008771348 ⟸ XM_008773126
- Peptide Label:	isoform X3
- UniProtKB:	A0A8I6A0R5 (UniProtKB/TrEMBL)
- Sequence:	show sequence MEGAEPRARPERLAEAEARATDGVRLVEVQLSGGAPWGFTLKGGREHGEPLVITKIEEGSKAAS VDKLLAGDEIVAINDVTLSGFRQEAICLVKGSHKTLKLVVKSSSSHDLSGSWEHTSLQRTSDHF SSMGSIDSLDHSSQLYPSGHLSSAKSNSSIDHLGGHSKRDSAYGSFSTCSSTPDHTLPKADASS TENILYKVGLWEASRPGSSRQSQSTGDPQGLQDRPSSFLPRVPGNSSKSPRPEDNIEPKIATSG RSNFGPVWYVPDKKKAPSPPPLGLPLRSDSFAVAARGHEKARGPPFSDLASMQHFTTLPHVQPR GDRRMETTDRQWKLAHPSSGKEIGNVGYQPEGHLDCRWLCSDDRAGRPSGAPGRHQFSLSSTDV HFLKSYHGSQHPQPCSDESPRFPSSPRELLRITPSGCLQEPPELSQDDNPAQVRWPGSVNQKLD DRGRSHYFSVPHRQPVHGSAHVLIPRSDYWHSDTTPVDLECPLLRPDQRGYPQQYEETPASHER GGYQQLNAGIEGCCSGIHEPPRASHTVRAGLQCPGNDFKLVDAESGRISRQRTPMLHSLTQDGA WRPGNSKDCGNEKPPLLDAQVGKPTRRSDRFATTLRNEIQMRRAKLQKSKSTVTLAGDSEAEDC AGDWRVDVGAVPEGSFPSTYKEHLKEAQTRVLKATSFQRRDLDPTPADQYPGPPEHRTCDHSAS SSLSSFPGEPDSAPRLCEAGLAKPPSSAGGVPHILRIGGRKRFTAEQKLKSYSEPEKINEVGLS GDHSPHPTIRTSEDSVGTFADRWKFFEETSKSLLQKPGHRQAFCGIPREKAERPQTQGHECEST EPWFQKRSRATSCGEILSEDRKVEKASEKLNPPRRLGTFAEYQASWKEQKKSLEARSSGRYHSA DDILDAGLDQQQRPQYIHERSRSSPSTDHYSQEVPVEPNRQAEDSGGQKEALLCTLQAEEGCSA PSSSVLSSAQPQDSQHVNEDPTSPQPEAQLSSKCQHLQTSTMETSRSPSPQFAPQKLTDKPPLL IHEDNSARIERVMDNNTTVKMVPIKIVHSESQPEKESRQSLACPAELPALPSGLEKDQIKTLST SEQCYSRFCVYTRQEVETPHRARPPEPQPPSTPAPPVRDSCSSPPSLNYGKAKEKTVDDLKSEE LAREIVGKDKSLADILDPSVKIKTTMDLMEGIFPKDEYLLEEAQQRRKLLPKVPSPRVTEDKKQ DPGMPGVVSLATNSTYYSTSAPKAELLIKMKDLQEPEEYSAGDLDHDLSIKKQELIDSISRKLQ VLREARESLLEDIQANNALGDEVEAIVKDVCKPNEFDKFRMFIGDLDKVVNLLLSLSGRLARVE NALNNLDDSPSPGDRQSLLEKQRVLTQQHEDAKELKENLDRRERIVFDILATYLSEENLADYEH FVKMKSALIIEQRELEDKIHLGEEQLKCLFDSLQPERSK hide sequence

RefSeq Acc Id:

XP_008771351 ⟸ XM_008773129

- Peptide Label:

isoform X4

- Sequence:

show sequence

METSRSPSPQFAPQKLTDKPPLLIHEDNSARIERVMDNNTTVKMVPIKIVHSESQPEKESRQSL
ACPAELPALPSGLEKDQIKTLSTSEQCYSRFCVYTRQEVETPHRARPPEPQPPSTPAPPVRDSC
SSPPSLNYGKAKEKTVDDLKSEELAREIVGKDKSLADILDPSVKIKTTMDLMEGIFPKDEYLLE
EAQQRRKLLPKVPSPRVTEDKKQDPGMPGVVSLATNSTYYSTSAPKAELLIKMKDLQEPEEYSA
GDLDHDLSIKKQELIDSISRKLQVLREARESLLEDIQANNALGDEVEAIVKDVCKPNEFDKFRM
FIGDLDKVVNLLLSLSGRLARVENALNNLDDSPSPGDRQSLLEKQRVLTQQHEDAKELKENLDR
RERIVFDILATYLSEENLADYEHFVKMKSALIIEQRELEDKIHLGEEQLKCLFDSLQPERSK

hide sequence

RefSeq Acc Id:

XP_008771352 ⟸ XM_008773130

- Peptide Label:

isoform X4

- Sequence:

show sequence

METSRSPSPQFAPQKLTDKPPLLIHEDNSARIERVMDNNTTVKMVPIKIVHSESQPEKESRQSL
ACPAELPALPSGLEKDQIKTLSTSEQCYSRFCVYTRQEVETPHRARPPEPQPPSTPAPPVRDSC
SSPPSLNYGKAKEKTVDDLKSEELAREIVGKDKSLADILDPSVKIKTTMDLMEGIFPKDEYLLE
EAQQRRKLLPKVPSPRVTEDKKQDPGMPGVVSLATNSTYYSTSAPKAELLIKMKDLQEPEEYSA
GDLDHDLSIKKQELIDSISRKLQVLREARESLLEDIQANNALGDEVEAIVKDVCKPNEFDKFRM
FIGDLDKVVNLLLSLSGRLARVENALNNLDDSPSPGDRQSLLEKQRVLTQQHEDAKELKENLDR
RERIVFDILATYLSEENLADYEHFVKMKSALIIEQRELEDKIHLGEEQLKCLFDSLQPERSK

hide sequence

RefSeq Acc Id:

XP_008771350 ⟸ XM_008773128

- Peptide Label:

isoform X4

- Sequence:

show sequence

METSRSPSPQFAPQKLTDKPPLLIHEDNSARIERVMDNNTTVKMVPIKIVHSESQPEKESRQSL
ACPAELPALPSGLEKDQIKTLSTSEQCYSRFCVYTRQEVETPHRARPPEPQPPSTPAPPVRDSC
SSPPSLNYGKAKEKTVDDLKSEELAREIVGKDKSLADILDPSVKIKTTMDLMEGIFPKDEYLLE
EAQQRRKLLPKVPSPRVTEDKKQDPGMPGVVSLATNSTYYSTSAPKAELLIKMKDLQEPEEYSA
GDLDHDLSIKKQELIDSISRKLQVLREARESLLEDIQANNALGDEVEAIVKDVCKPNEFDKFRM
FIGDLDKVVNLLLSLSGRLARVENALNNLDDSPSPGDRQSLLEKQRVLTQQHEDAKELKENLDR
RERIVFDILATYLSEENLADYEHFVKMKSALIIEQRELEDKIHLGEEQLKCLFDSLQPERSK

hide sequence

RefSeq Acc Id:

XP_008771353 ⟸ XM_008773131

- Peptide Label:

isoform X4

- Sequence:

show sequence

METSRSPSPQFAPQKLTDKPPLLIHEDNSARIERVMDNNTTVKMVPIKIVHSESQPEKESRQSL
ACPAELPALPSGLEKDQIKTLSTSEQCYSRFCVYTRQEVETPHRARPPEPQPPSTPAPPVRDSC
SSPPSLNYGKAKEKTVDDLKSEELAREIVGKDKSLADILDPSVKIKTTMDLMEGIFPKDEYLLE
EAQQRRKLLPKVPSPRVTEDKKQDPGMPGVVSLATNSTYYSTSAPKAELLIKMKDLQEPEEYSA
GDLDHDLSIKKQELIDSISRKLQVLREARESLLEDIQANNALGDEVEAIVKDVCKPNEFDKFRM
FIGDLDKVVNLLLSLSGRLARVENALNNLDDSPSPGDRQSLLEKQRVLTQQHEDAKELKENLDR
RERIVFDILATYLSEENLADYEHFVKMKSALIIEQRELEDKIHLGEEQLKCLFDSLQPERSK

hide sequence

RefSeq Acc Id:

XP_008771349 ⟸ XM_008773127

- Peptide Label:

isoform X4

- Sequence:

show sequence

METSRSPSPQFAPQKLTDKPPLLIHEDNSARIERVMDNNTTVKMVPIKIVHSESQPEKESRQSL
ACPAELPALPSGLEKDQIKTLSTSEQCYSRFCVYTRQEVETPHRARPPEPQPPSTPAPPVRDSC
SSPPSLNYGKAKEKTVDDLKSEELAREIVGKDKSLADILDPSVKIKTTMDLMEGIFPKDEYLLE
EAQQRRKLLPKVPSPRVTEDKKQDPGMPGVVSLATNSTYYSTSAPKAELLIKMKDLQEPEEYSA
GDLDHDLSIKKQELIDSISRKLQVLREARESLLEDIQANNALGDEVEAIVKDVCKPNEFDKFRM
FIGDLDKVVNLLLSLSGRLARVENALNNLDDSPSPGDRQSLLEKQRVLTQQHEDAKELKENLDR
RERIVFDILATYLSEENLADYEHFVKMKSALIIEQRELEDKIHLGEEQLKCLFDSLQPERSK

hide sequence

Ensembl Acc Id:

ENSRNOP00000056187 ⟸ ENSRNOT00000059431

Ensembl Acc Id:

ENSRNOP00000042259 ⟸ ENSRNOT00000050819

Ensembl Acc Id:

ENSRNOP00000092823 ⟸ ENSRNOT00000117197

Ensembl Acc Id:

ENSRNOP00000083830 ⟸ ENSRNOT00000104025

Ensembl Acc Id:

ENSRNOP00000105757 ⟸ ENSRNOT00000122384

Ensembl Acc Id:

ENSRNOP00000112703 ⟸ ENSRNOT00000161671

Protein Domains

ASD1 ASD2 PDZ

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-Q7TP36-F1-model_v2	AlphaFold	Q7TP36	1-1423	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1565163	AgrOrtholog
BioCyc Gene	G2FUF-2707	BioCyc
Ensembl Genes	ENSRNOG00000024322	Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript	ENSRNOT00000050819.2	UniProtKB/Swiss-Prot
	ENSRNOT00000104025	ENTREZGENE
	ENSRNOT00000122384	ENTREZGENE
Gene3D-CATH	6.10.250.3120	UniProtKB/Swiss-Prot
InterPro	ASD1_dom	UniProtKB/Swiss-Prot
	ASD2_dom	UniProtKB/Swiss-Prot
	Shroom_fam	UniProtKB/Swiss-Prot
NCBI Gene	317435	ENTREZGENE
PANTHER	PTHR15012	UniProtKB/Swiss-Prot
	PTHR15012:SF8	UniProtKB/Swiss-Prot
Pfam	ASD1	UniProtKB/Swiss-Prot
	ASD2	UniProtKB/Swiss-Prot
PhenoGen	Shroom2	PhenoGen
PROSITE	ASD1	UniProtKB/Swiss-Prot
	ASD2	UniProtKB/Swiss-Prot
RatGTEx	ENSRNOG00000024322	RatGTEx
UniProt	A0A8I6A0R5	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I6GJZ2_RAT	UniProtKB/TrEMBL
	D4A053	ENTREZGENE, UniProtKB/TrEMBL
	Q7TP36	ENTREZGENE, UniProtKB/Swiss-Prot

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2008-03-03	Shroom2	shroom family member 2	Apxl	apical protein-like (Xenopus laevis)	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2006-03-30	Apxl	apical protein-like (Xenopus laevis)	LOC317435	similar to apical protein, Xenopus laevis-like	Symbol and Name updated	1299863	APPROVED
2006-02-09	LOC317435	similar to apical protein, Xenopus laevis-like			Symbol and Name status set to provisional	70820	PROVISIONAL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - ClinVar