Advanced Search (OLGA)

Gene: Scrib (scribble planar cell polarity protein) Rattus norvegicus

Analyze

Symbol:

Scrib

Name:

scribble planar cell polarity protein

RGD ID:

1565055

Description:

Predicted to enable protein kinase binding activity and signaling adaptor activity. Involved in several processes, including astrocyte cell migration; neurotransmitter receptor transport, endosome to postsynaptic membrane; and regulation of postsynaptic neurotransmitter receptor internalization. Located in cell-cell junction. Is active in glutamatergic synapse. Is extrinsic component of postsynaptic density membrane. Orthologous to human SCRIB (scribble planar cell polarity protein); PARTICIPATES IN Wnt signaling, the planar cell polarity pathway; INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 4,4'-sulfonyldiphenol; 6-propyl-2-thiouracil.

Type:

protein-coding

RefSeq Status:

PROVISIONAL

Previously known as:

LOC362938; LOC362939; protein scribble homolog; RGD1565055; scribbled homolog; scribbled homolog (Drosophila); scribbled planar cell polarity protein; similar to PDZ-domain protein scribble

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	SCRIB (scribble planar cell polarity protein)	HGNC	EggNOG, Ensembl, HomoloGene, Inparanoid, NCBI, OrthoDB, OrthoMCL, Panther, Treefam
Mus musculus (house mouse):	Scrib (scribbled planar cell polarity)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Scrib (scribble planar cell polarity protein)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	SCRIB (scribble planar cell polarity protein)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	SCRIB (scribble planar cell polarity protein)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Scrib (scribble planar cell polarity protein)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	SCRIB (scribble planar cell polarity protein)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	SCRIB (scribble planar cell polarity protein)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Scrib (scribble planar cell polarity protein)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Alliance orthologs ³
Homo sapiens (human):	SCRIB (scribble planar cell polarity protein)	Alliance	DIOPT (HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Mus musculus (house mouse):	Scrib (scribbled planar cell polarity)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	scrib (scribble planar cell polarity protein)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Caenorhabditis elegans (roundworm):	let-413	Alliance	DIOPT (Hieranoid\|InParanoid\|OrthoInspector\|PhylomeDB\|SonicParanoid)
Drosophila melanogaster (fruit fly):	scrib	Alliance	DIOPT (Hieranoid\|OMA\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	scrib	Alliance	DIOPT (Ensembl Compara\|OMA\|OrthoFinder\|PANTHER)

Latest Assembly:

mRatBN7.2 - mRatBN7.2 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	7	109,640,034 - 109,663,354 (-)	NCBI		GRCr8
mRatBN7.2	7	107,759,343 - 107,782,364 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	7	107,759,343 - 107,782,331 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	7	109,499,717 - 109,522,737 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	7	111,723,394 - 111,746,414 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	7	111,680,128 - 111,703,152 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	7	117,105,810 - 117,128,802 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	7	117,105,810 - 117,128,798 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	7	117,091,481 - 117,114,469 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	7	114,077,733 - 114,100,721 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
Celera	7	104,116,077 - 104,138,929 (-)	NCBI		Celera
Cytogenetic Map	7	q34	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

Brown-Vialetto-Van Laere syndrome 2 (ISO)

epidermolysis bullosa simplex with muscular dystrophy (ISO)

holoprosencephaly (ISO)

microcephaly (ISO)

neural tube defect (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

(+)-catechin (ISO)

17beta-estradiol (ISO)

2,2',4,4'-Tetrabromodiphenyl ether (ISO)

2,3,7,8-tetrachlorodibenzodioxine (EXP,ISO)

2,4,6-tribromophenol (ISO)

3,3',5,5'-tetrabromobisphenol A (ISO)

3-isobutyl-1-methyl-7H-xanthine (ISO)

4,4'-sulfonyldiphenol (EXP,ISO)

6-propyl-2-thiouracil (EXP)

acrolein (ISO)

acrylamide (ISO)

aflatoxin B1 (ISO)

alpha-pinene (ISO)

amitrole (EXP)

arsane (ISO)

arsenic atom (ISO)

arsenite(3-) (ISO)

atrazine (ISO)

benzo[a]pyrene (ISO)

bisphenol A (EXP,ISO)

bisphenol F (EXP,ISO)

cadmium atom (ISO)

caffeine (ISO)

CGP 52608 (ISO)

cobalt dichloride (ISO)

coumarin (ISO)

decabromodiphenyl ether (ISO)

dexamethasone (ISO)

Dibutyl phosphate (ISO)

dicrotophos (ISO)

dioxygen (ISO)

disodium selenite (ISO)

enzyme inhibitor (ISO)

epoxiconazole (ISO)

ethanol (ISO)

ethyl methanesulfonate (ISO)

formaldehyde (ISO)

FR900359 (ISO)

gentamycin (EXP)

indometacin (ISO)

ivermectin (ISO)

lipopolysaccharide (ISO)

methyl methanesulfonate (ISO)

ozone (ISO)

paracetamol (EXP,ISO)

perfluorohexanesulfonic acid (ISO)

quercetin (ISO)

resveratrol (ISO)

SB 431542 (ISO)

sodium arsenite (ISO)

sulfadimethoxine (EXP)

sunitinib (ISO)

tetrachloromethane (ISO)

thiram (ISO)

titanium dioxide (ISO)

tungsten (ISO)

valproic acid (ISO)

vinclozolin (EXP)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

activation of GTPase activity (ISO)

apoptotic process involved in morphogenesis (ISO)

astrocyte cell migration (IMP)

auditory receptor cell morphogenesis (ISO)

auditory receptor cell stereocilium organization (ISO)

cell migration (IBA,ISO)

cell population proliferation (ISO)

cell-cell adhesion (IBA,ISO)

cochlear nucleus development (ISO)

epithelial structure maintenance (ISO)

establishment of apical/basal cell polarity (ISO)

establishment of T cell polarity (ISO)

establishment or maintenance of epithelial cell apical/basal polarity (IBA)

inner ear receptor cell stereocilium organization (ISO)

mammary gland duct morphogenesis (ISO)

morphogenesis of embryonic epithelium (ISO)

negative regulation of activated T cell proliferation (ISO)

negative regulation of mitotic cell cycle (ISO)

negative regulation of translational initiation (ISO)

neural tube closure (ISO)

neurotransmitter receptor transport postsynaptic membrane to endosome (IBA)

neurotransmitter receptor transport, endosome to postsynaptic membrane (IBA,IDA,IMP)

polarized epithelial cell differentiation (ISO)

positive chemotaxis (ISO)

positive regulation of apoptotic process (ISO)

positive regulation of epithelial cell migration (ISO)

positive regulation of receptor recycling (ISO)

positive regulation of type II interferon production (ISO)

post-anal tail morphogenesis (ISO)

protein localization (ISO)

protein localization to adherens junction (ISO)

receptor clustering (IBA)

regulation of postsynaptic neurotransmitter receptor internalization (IDA,IMP)

synaptic vesicle endocytosis (ISO)

synaptic vesicle targeting (ISO)

vesicle-mediated transport in synapse (IDA,IMP)

wound healing (ISO)

Cellular Component

adherens junction (IBA,ISO)

basolateral plasma membrane (IBA,ISO)

cell junction (ISO)

cell leading edge (ISO)

cell-cell contact zone (ISO)

cell-cell junction (IDA,ISO)

cytoplasm (ISO)

extrinsic component of postsynaptic density membrane (IDA,IMP)

glutamatergic synapse (IDA,IMP)

immunological synapse (ISO)

myelin sheath abaxonal region (ISO)

nucleoplasm (IEA,ISO)

plasma membrane (ISO)

postsynaptic density (IBA)

postsynaptic membrane (IBA,ISO)

presynaptic membrane (ISO)

Scrib-APC-beta-catenin complex (ISO)

Molecular Function

protein binding (IPI,ISO)

protein kinase binding (IBA)

signaling adaptor activity (ISO)

Molecular Pathway Annotations Click to see Annotation Detail View

Wnt signaling, the planar cell polarity pathway (ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2.	Planar cell polarity signaling in vertebrates.	Jones C and Chen P, Bioessays. 2007 Feb;29(2):120-32.
3.	Scrib controls Cdc42 localization and activity to promote cell polarization during astrocyte migration.	Osmani N, etal., Curr Biol. 2006 Dec 19;16(24):2395-405. Epub 2006 Nov 2.
4.	Scribble1/AP2 complex coordinates NMDA receptor endocytic recycling.	Piguel NH, etal., Cell Rep. 2014 Oct 23;9(2):712-27. doi: 10.1016/j.celrep.2014.09.017. Epub 2014 Oct 9.
5.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

Additional References at PubMed

PMID:12499390	PMID:15182672	PMID:15458844	PMID:15649318	PMID:15775968	PMID:16344308	PMID:16611247	PMID:16687519	PMID:16965391	PMID:18329370	PMID:18716323	PMID:19041750
PMID:19458197	PMID:20215345	PMID:20237282	PMID:20357130	PMID:20363326	PMID:20458337	PMID:20643356	PMID:21515572	PMID:22095531	PMID:22114281	PMID:22333836	PMID:23038739
PMID:23973368	PMID:25468996	PMID:27380321	PMID:28169360

Genomics

Comparative Map Data

Scrib
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	7	109,640,034 - 109,663,354 (-)	NCBI		GRCr8
mRatBN7.2	7	107,759,343 - 107,782,364 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	7	107,759,343 - 107,782,331 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	7	109,499,717 - 109,522,737 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	7	111,723,394 - 111,746,414 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	7	111,680,128 - 111,703,152 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	7	117,105,810 - 117,128,802 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	7	117,105,810 - 117,128,798 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	7	117,091,481 - 117,114,469 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	7	114,077,733 - 114,100,721 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
Celera	7	104,116,077 - 104,138,929 (-)	NCBI		Celera
Cytogenetic Map	7	q34	NCBI

SCRIB
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	8	143,790,925 - 143,815,773 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	8	143,790,920 - 143,815,773 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	8	144,873,095 - 144,897,943 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	8	144,945,078 - 144,969,537 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Celera	8	141,185,992 - 141,210,452 (-)	NCBI		Celera
Cytogenetic Map	8	q24.3	NCBI
HuRef	8	140,126,075 - 140,150,540 (-)	NCBI		HuRef
CHM1_1	8	144,913,332 - 144,937,791 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	8	144,947,418 - 144,972,471 (-)	NCBI		T2T-CHM13v2.0

Scrib
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	15	75,919,011 - 75,941,633 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	15	75,919,007 - 75,941,633 (-)	Ensembl		GRCm39 Ensembl
GRCm38	15	76,047,162 - 76,069,784 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	15	76,047,158 - 76,069,784 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	15	75,877,616 - 75,900,160 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	15	75,874,441 - 75,896,985 (-)	NCBI		MGSCv36	mm8
Celera	15	77,548,113 - 77,570,657 (-)	NCBI		Celera
Cytogenetic Map	15	D3	NCBI
cM Map	15	35.29	NCBI

Scrib
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955454	2,461,760 - 2,482,098 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955454	2,461,526 - 2,482,734 (-)	NCBI	ChiLan1.0	ChiLan1.0

SCRIB
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	7	161,275,637 - 161,301,755 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	8	136,792,596 - 136,819,011 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	8	140,544,797 - 140,571,078 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	8	143,557,479 - 143,582,409 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	8	143,557,722 - 143,582,353 (-)	Ensembl	panpan1.1		panPan2

SCRIB
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	13	37,356,405 - 37,374,765 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	13	37,356,405 - 37,374,681 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	13	37,312,750 - 37,331,086 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	13	37,828,183 - 37,846,535 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	13	37,828,186 - 37,846,509 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	13	37,502,286 - 37,520,617 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	13	37,619,233 - 37,637,560 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	13	38,100,565 - 38,118,912 (-)	NCBI		UU_Cfam_GSD_1.0

Scrib
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405303	923,076 - 943,996 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936470	8,349,188 - 8,369,864 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936470	8,349,175 - 8,370,099 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

SCRIB
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	4	825,062 - 852,664 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	4	824,925 - 852,360 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1

SCRIB
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	8	138,008,722 - 138,033,874 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	8	138,008,579 - 138,033,843 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666039	1,843,884 - 1,869,060 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Scrib
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624735	12,997,408 - 13,018,533 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624735	12,997,358 - 13,018,765 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in Scrib
45 total Variants

miRNA Target Status

Predicted Target Of

	Summary Value
Count of predictions:	50
Count of miRNA genes:	49
Interacting mature miRNAs:	50
Transcripts:	ENSRNOT00000045280
Prediction methods:	Miranda, Rnahybrid
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (mRatBN7.2)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
1300179	Kidm5	Kidney mass QTL 5	3.51		kidney mass (VT:0002707)	left kidney wet weight (CMO:0000083)	7	43747012	135012528	Rat
1331728	Bp214	Blood pressure QTL 214	2.825		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	7	80221299	124373579	Rat
1331731	Bp216	Blood pressure QTL 216	2.851		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	7	102297359	133492884	Rat
2298475	Eau6	Experimental allergic uveoretinitis QTL 6		0.0029	uvea integrity trait (VT:0010551)	experimental autoimmune uveitis score (CMO:0001504)	7	84257275	129257275	Rat
71114	Niddm14	Non-insulin dependent diabetes mellitus QTL 14	4.5		blood glucose amount (VT:0000188)	plasma glucose level (CMO:0000042)	7	84257275	129257275	Rat
1357336	Gluco6	Glucose level QTL 6	3.4		blood glucose amount (VT:0000188)	serum glucose level (CMO:0000543)	7	94811326	116294265	Rat
1358361	Sradr5	Stress Responsive Adrenal Weight QTL 5	5.55		adrenal gland mass (VT:0010420)	both adrenal glands wet weight (CMO:0000164)	7	43747012	108555253	Rat
1357338	Stl17	Serum triglyceride level QTL 17	3.23		blood triglyceride amount (VT:0002644)	serum triglyceride level (CMO:0000360)	7	69736356	112729554	Rat
631687	Hcas1	Hepatocarcinoma susceptibility QTL 1	3.9	0.001	liver integrity trait (VT:0010547)	liver tumorous lesion volume to total liver volume ratio (CMO:0001082)	7	91412594	129807172	Rat
70159	Bp61	Blood pressure QTL 61		0.0001	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	7	103146217	116738842	Rat
634331	Pia17	Pristane induced arthritis QTL 17	4.7		joint integrity trait (VT:0010548)	arthritic paw count (CMO:0001460)	7	73829340	130221005	Rat
1358914	Bp266	Blood pressure QTL 266			arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	7	83591953	134666232	Rat
631504	Cm27	Cardiac mass QTL 27	3.45		heart left ventricle mass (VT:0007031)	heart left ventricle wet weight (CMO:0000071)	7	44421311	118198041	Rat
634322	Bw12	Body weight QTL 12	0		body mass (VT:0001259)	body weight (CMO:0000012)	7	83153392	128153392	Rat
70173	Niddm19	Non-insulin dependent diabetes mellitus QTL 19	4.33	0.00005	blood glucose amount (VT:0000188)	blood glucose level area under curve (AUC) (CMO:0000350)	7	64002457	135012528	Rat
1549899	Stresp8	Stress response QTL 8	4.37	0.0008	stress-related behavior trait (VT:0010451)	defensive burying duration (CMO:0001961)	7	90482196	135012528	Rat
2317052	Aia17	Adjuvant induced arthritis QTL 17	2.13		joint integrity trait (VT:0010548)	left rear ankle joint diameter (CMO:0002149)	7	81737938	126737938	Rat
631529	Tls2	T-lymphoma susceptibility QTL 2	0	0.001	thymus integrity trait (VT:0010555)	percentage of study population developing T-cell lymphomas during a period of time (CMO:0001911)	7	80221299	109401111	Rat
731176	Glom5	Glomerulus QTL 5	2.5	0.0035	kidney glomerulus morphology trait (VT:0005325)	count of superficial glomeruli not directly contacting the kidney surface (CMO:0001002)	7	96670164	135012528	Rat
7411607	Foco15	Food consumption QTL 15		0.001	eating behavior trait (VT:0001431)	feed conversion ratio (CMO:0001312)	7	75918751	120918751	Rat
2306821	Bp335	Blood pressure QTL 335		0.001	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	7	106571501	135012528	Rat
1558655	Swd4	Spike wave discharge measurement QTL 4	3.68	0.0002	brain electrophysiology trait (VT:0010557)	brain spike-and-wave discharge severity grade (CMO:0001988)	7	86983365	131983365	Rat
634336	Anxrr17	Anxiety related response QTL 17	3.66		locomotor behavior trait (VT:0001392)	number of entries into a discrete space in an experimental apparatus (CMO:0000960)	7	924703	115097879	Rat
1331768	Kidm10	Kidney mass QTL 10	4.62096		kidney mass (VT:0002707)	left kidney wet weight (CMO:0000083)	7	80221299	125221299	Rat
61357	Bp38	Blood pressure QTL 38	1.6	0.052	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	7	41333674	119109060	Rat
2313102	Bmd79	Bone mineral density QTL 79	2.3	0.0001	tibia mineral mass (VT:1000283)	total volumetric bone mineral density (CMO:0001728)	7	94811085	116738842	Rat
731174	Uae23	Urinary albumin excretion QTL 23	2.4	0.0042	urine albumin amount (VT:0002871)	urine albumin excretion rate (CMO:0000757)	7	104603555	135012528	Rat
2316947	Rf58	Renal function QTL 58	7.8		kidney glomerulus morphology trait (VT:0005325)	index of glomerular damage (CMO:0001135)	7	68938720	113886318	Rat
1331746	Kidm9	Kidney mass QTL 9	3.934		kidney mass (VT:0002707)	right kidney wet weight (CMO:0000082)	7	80221299	112308525	Rat
7411654	Foco25	Food consumption QTL 25	9.3	0.001	eating behavior trait (VT:0001431)	feed conversion ratio (CMO:0001312)	7	75918751	120918751	Rat
2316955	Stl24	Serum triglyceride level QTL 24	7.1		blood triglyceride amount (VT:0002644)	plasma triglyceride level (CMO:0000548)	7	68938720	113886318	Rat
2299163	Iddm34	Insulin dependent diabetes mellitus QTL 34	2.71		blood glucose amount (VT:0000188)	age at onset/diagnosis of type 1 diabetes mellitus (CMO:0001140)	7	91281130	135012528	Rat
2316952	Pur22	Proteinuria QTL 22	5.2		urine protein amount (VT:0005160)	urine protein level (CMO:0000591)	7	68938720	113886318	Rat
631540	Bw9	Body weight QTL 9	4.5		body mass (VT:0001259)	body weight (CMO:0000012)	7	69736226	117455174	Rat
1358891	Bp265	Blood pressure QTL 265	2.21		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	7	83591953	134666232	Rat

Markers in Region

RH141209

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	7	107,782,970 - 107,783,185 (+)	MAPPER	mRatBN7.2
Rnor_6.0	7	117,129,438 - 117,129,652	NCBI	Rnor6.0
Rnor_5.0	7	117,115,109 - 117,115,323	UniSTS	Rnor5.0
RGSC_v3.4	7	114,101,361 - 114,101,575	UniSTS	RGSC3.4
Celera	7	104,139,569 - 104,139,783	UniSTS
Cytogenetic Map	7	q34	UniSTS

BE119987

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	7	107,766,848 - 107,767,009 (+)	MAPPER	mRatBN7.2
Rnor_6.0	7	117,113,316 - 117,113,476	NCBI	Rnor6.0
Rnor_5.0	7	117,098,987 - 117,099,147	UniSTS	Rnor5.0
RGSC_v3.4	7	114,085,239 - 114,085,399	UniSTS	RGSC3.4
Celera	7	104,123,583 - 104,123,743	UniSTS
RH 3.4 Map	7	785.2	UniSTS
Cytogenetic Map	7	q34	UniSTS

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	nervous system	renal system	reproductive system	respiratory system
9	11	49	113	91	90	59	25	59	6	218	97	93	45	60	31

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001191879	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006241818	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006241819	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008765578	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017594967	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017594968	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017594969	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017594970	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017594971	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017594972	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039079543	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039079544	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039079545	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063263870	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063263871	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063263872	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063263873	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_005486672	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_010053008	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AC126537	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH473950	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000007	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000045280 ⟹ ENSRNOP00000044022

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	7	107,759,343 - 107,782,331 (-)	Ensembl
Rnor_6.0 Ensembl	7	117,105,810 - 117,128,798 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000097559 ⟹ ENSRNOP00000095752

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	7	107,759,343 - 107,782,331 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000101717 ⟹ ENSRNOP00000090189

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	7	107,759,343 - 107,782,331 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000102170 ⟹ ENSRNOP00000095517

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	7	107,759,343 - 107,782,331 (-)	Ensembl

RefSeq Acc Id:

NM_001191879 ⟹ NP_001178808

RefSeq Status:

PROVISIONAL

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	7	109,640,034 - 109,663,022 (-)	NCBI
mRatBN7.2	7	107,759,343 - 107,782,331 (-)	NCBI
Rnor_6.0	7	117,105,810 - 117,128,798 (-)	NCBI
Rnor_5.0	7	117,091,481 - 117,114,469 (-)	NCBI
Celera	7	104,116,077 - 104,138,929 (-)	NCBI

Sequence:

show sequence

CCGGCTGCGGTGCTGCGGGCGGATGAGCTGCTAGGTGAGCAGGCCGGGCGGGATGCGGAGCCGC
CGCCGCGCCCCCACCGCCTAAGAAAGCGCTGCCGGGTCAGGCCGCGCTGCCAGCTGTGTGCCGC
CATTCGAGCCTACAGCTCGTATTGAACGCGGGCCGAGCCTAGCGCCGACCCCGGCCGCAGTCCG
GGTCCGGGCTGCCCGCCCCACCCCCGCGCGCGCCGCTCCGCCCGCGCTCGGCGCTCATGCGGGC
CGAGCCCCGCCCCCCGGCCCGAGCCCGCCGAGCGCCTCCCGAGCCCGCGCTCACTGCCGGCCCG
CATCATGCTGAAGTGCATCCCGCTCTGGCGTTGCAACCGGCACGTGGAGTCGGTGGATAAGCGG
CATTGCTCGCTGCAGGTTGTACCAGAGGAGATTTACCGCTACAGTCGTAGCCTGGAGGAGCTGC
TCCTCGACGCCAACCAGCTGCGCGAGCTACCTAAGCCCTTCTTCCGGCTATTGAACTTGCGGAA
GTTGGGCCTCAGTGACAACGAGATCCAGCGGCTGCCTCCTGAAGTGGCTAACTTCATGCAACTG
GTGGAGCTGGATGTGTCCCGGAATGATATCCCCGAGATACCTGAGAGCATAAAGTTCTGTAAGG
CTCTGGAGATTGCAGACTTCAGCGGGAACCCCCTCTCCAGGCTTCCCGATGGCTTCACACAGCT
GCGCAGCCTGGCTCACCTGGCTCTGAATGATGTGTCCCTGCAGGCACTGCCTGGAGATGTGGGC
AACCTGGCCAATTTGGTGACCTTGGAACTGCGGGAGAACCTGCTTAAATCTCTCCCTGCGTCCC
TGTCTTTCCTTGTGAAGCTAGAACAGCTGGATCTGGGAGGCAATGACCTGGAAGTGCTGCCTGA
CACTCTGGGGGCTCTGCCTAACCTACGGGAGCTGTGGCTAGACCGAAACCAACTGTCAGCGCTG
CCCCCGGAGCTAGGCAACCTGCGGCGGCTGGTATGCCTGGACGTGTCAGAGAACAGGCTGGAGG
AGCTACCCGTGGAGCTGGGTGGGCTGGCACTGCTCACAGATCTGCTGCTTTCCCAGAATTTGCT
TCAGCGGCTGCCAGAGGGCATTGGTCAGCTGAAGCAGCTGTCTATCCTGAAGGTGGACCAGAAC
CGGCTATGTGAGGTCACTGAGGCCATAGGGGACTGTGAGAACCTCTCGGAACTGATCCTCACAG
AGAACCTGTTAACGGCTTTACCCCGCTCTCTGGGCAAACTGACCAAACTGACGAACCTTAATGT
GGACCGGAATCATCTTGAGGTGCTGCCACCTGAAATCGGAGGCTGCGTAGCCCTTAGTGTCCTC
TCCTTGAGAGACAATCGCCTGGCTGTCCTTCCTCCTGAGCTTGCCCATACAGCTGAGCTGCATG
TGCTTGACGTAGCTGGGAACCGGCTGCGGAGTCTGCCGTTTGCACTCACCCACCTCAACCTCAA
GGCACTGTGGCTGGCTGAGAACCAGGCACAACCCATGCTCCGCTTCCAGACCGAGGATGATGCC
CAAACTGGTGAAAAGGTGCTTACCTGCTACCTGCTGCCCCAGCAGCCCTTGCCAAGTCTCGAAG
ACCCTGGACAGCAGAGCAGTCCCTCAGAGAGCTGCAGTGATGCCCCTCTGAGCCGTGTCAGTGT
CATCCAGTTTGAGGACCCCCTTGAAGGTGAAGAAGATGCTGAGGAAGCTGCAGCCGAGAAGCGG
GGCCTACAGCGTAGGGCCACACCTCATCCCAGTGAGCTCAAGGTGATGAAGAGGGGCATTGAGG
AGCGCCGAAACGAGGCCTTCGTCTGCAAGCCTGACCCCAGCCCACCCTCACCTTCAGAGGAGGA
GAGGAGGCTGAGCGCAGAGTCTGCCCTGAGTGGTAACTCTGTCCCGTCGGCAAGCACAGCCTCC
GATGGTGAACCTGAGACCCTCCCGGCTGAGGTACAAGGGCTAGGCCAGCAAGAGGCCATGCCTG
GTCAGGAAGAGTATCCAGAGGAAGACTATAATGAGCCCACAGTGCACTTTGCAGAGGACACACT
GATCCCTAGGGAAGATGGTGAAGGTGAAGAGGGACAGCCCGAGGCTCCCTGGCCGCTGCCCAGT
GGCCGACAGAGGCTCATCCGCAAAGACACACCCCACTACAAGAAGCACTTCAAGATCTCTAAGC
TCCCACAGCCCGAAGCTGTTGTGGCCCTGCTGCAAGGGGTGCAGACAGACAGGGAGGGCCCCAC
TGCGGGTTGGCACAATGGCCCACACACACCTTGGGCTCCTCGAGCCCATGAGGAGGAAGAGGAG
GAGGAGAACAGGGATGAAGAAGAAGGCGAGGCCAGCATGGAAGAAGATGACAAAGAAGAGGCTG
TGGCTTCTGCTCCCTCTGTCAAGGGGGTGTCGTTTGACCAGGCCAATAACCTGCTGATAGAGCC
TGCTCGCATTGAGGAGGAAGAGTTAACACTCACGATCGTGCGGCAGACAGGGGGCCTGGGCATC
AGCATCGCAGGGGGAAAGGGCTCTACCCCCTACAAAGGAGACGATGAGGGCATTTTCATCTCTC
GAGTGTCTGAGGAGGGTCCTGCAGCCCATGCTGGAGTCCGAGTCGGTGACAAACTTCTCGAGGT
GAATGGTGTGGCCTTGCAAGATGCAGAACACCATGAGGCTGTGGAAGCACTTCGGGGGGCCGGT
GCTGCTGTGCAAATGCGAGTGTGGAGGGAAAGAATGGTGGAGCCTGAGAATGCAGTCACCATCA
CCCCTCTCCGCCCTGAAGATGACTATAGTCCCCGGGAGTGGCGGGGAGGGGGCCTGCGCCTGCC
CCTGCTTCAGCCAGAGACTCCTGTACCCCTCCGCCAGCGCCACGCTGCCTGTCTTGTGCGCAGT
GAAAAGGGGCTGGGCTTCAGCATTGCTGGTGGGAAGGGCTCCACACCTTACCGGGCTGGCGATG
CGGGCATTTTTATATCTCGCATTGCAGAGGGAGGGGCTGCCCACCGGGCAGGCACTCTACAGGT
TGGCGACCGTGTTCTCTCGATCAATGGAGTGGACATGACTGAGGCACGGCACGATCATGCTGTC
TCCCTGCTGACTGCTGCTTCCACTACCATCTCCCTGCTTCTGGAGAGGGAAACTGGAGGGGCTT
ATCCACCCAGCCCCCCACCACATTCCTCTTCAACCCCTACTGCTACTGTTGCTGCTACCATGAC
CACTGCCATCCCCGGAGAACCTCTGCTACCTAGACTGTCCCCTAGCCTCTTGGCCACTGCCTTG
GAAGGACCATACCCTGTGGAGGAAATTTGCCTGCCCAGGGCTGGTGGCCCATTGGGGCTTAGCA
TTGTAGGAGGTTCTGATCACTCCAGCCATCCGTTTGGTGTCCAGGATCCTGGTGTATTCATCTC
CAAGGTGCTTCCTCGGGGCCTTGCTGCTCGCTGTGGCCTTCGGGTTGGGGACCGCATCCTAGCA
GTGAATGGGCAGGATGTTCGGGAGGCCACACATCAGGAGGCAGTTAGTGCCCTGCTCAGGCCCT
GCCTGGAGCTGTGTCTGCTTGTACGGAGGGACCCACCACCCCCAGGCATGCGGGAACTCTGCAT
CCAGAAGGCCCCTGGAGAGAAGCTGGGTATCAGCATCCGAGGAGGCGCCAAGGGTCATGCGGGG
AACCCGTGTGATCCTACAGATGAGGGCATCTTTATCTCCAAGGTGAGCCCTACAGGAGCTGCCG
GGCGTGACGGGCGGCTGCGTGTGGGGCTGCGGCTGCTAGAAGTGAACCAACAGAGCCTCCTGGG
CCTCACGCATGCTGAGGCGGTGCAGCTGCTGCGCAGCGTGGGTGACACCCTCACCGTGCTTGTC
TGTGATGGCTTTGACACCAGCACCACCACAGCCCTGGAGGTGTCCCCAGGTGTCATAGCCAACC
CATTTGCAGCAGGCCTTGGCCACAGGAACAGTCTGGAAAGCATTTCATCCATTGACCGGGAGCT
GAGTCCTGAAGGCCCAGGCAAGGAGAAAGAGCTGGCCAGTCAAACCCTACCCTGGGAGCCTGAG
TCTGCAGAGACCACGGGTCGGAATCAAGAGCCCCTCAAGCTGGATTACCGTGTCCTGGCTGCTG
TGCCCAGTGCTGGGAGTTTGCAAAGAGGACCCTGTGCGACCACTGGAGGGAAGATGACTGAGGC
CCCCTCTTCCCCTGGCAGTCAGCAAACAAAACCGGGGGTGATCCAGCCATTGGCTCAGGCCTGG
CCAAGGGACTCCCCAGCCCCCAGGGGCAGAGATGGTCCCTGTTCTCCGCCCTCCCCTGACGAAC
TGCCAGCCAATGTGAAGCAGGCGTACAGGGCCTTCGCAGCTGTGCCCACCGTACATCCTCCTGA
GAACAGTGCTACCCAGCCTCCAACACCTGGTCCCGCAGCCTCCCCAGAGCAGCTGTCCTTCCGT
GAACGACAAAAGTACTTTGAGCTGGAGGTACGGGTGCCTCAAGCAGAGGGTCCCCCAAAGCGTG
TGTCCCTGGTGGGTGCTGACGACTTGCGGAAGATGCAGGAGGAGGAAGCTCGCAAGCTGCAGCA
GAAGAGGGCACAGATGCTTCGGGAAGAGGCAGTAACCTCAGGACCTGACACGGGGCTCGCCTCA
GACAGGGAGTCCCTGGATGATGAGCAGGAGGCTGAGCAGCCCTGGGCCGGGCCAAGCCATGCAG
GAGGCCTCAGCCCCTCTTCACCCACACCCCTGGGAGGCAGCGCCCCTGTGAGGACAGCCAAAGC
TGAGCGACGTCATCAGGAGCGGCTGCGTATGCAGAGCCCTGAGCTGCCCGCCCCAGAGCGGGCC
CTGTCTCCTGCAGAGCGAAGGGCTCTAGAGGCCGAGAAGCGAGCACTGTGGAGAGCAGCCAGAA
TGAAGTCTCTGGAGCAGGATGCCCTCCGTGCACAGATGGTCCTCAGCAAGTCCCAGGAAGGCCG
TGGCAAGAGAGGACCCTTGGAGCGGCTGGCTGAGGCCCCTTCACCTGCACCCACACCATCACCT
ACACCATTAGAAGACTTTGGCCTCCAGACCAGTACCTCCCCTGGACGCTTGCCTTTGTCTGGAA
AGAAGTTTGACTACAGGGCCTTCGCAGCCCTGCCTTCTTCCAGGCCTGTGTATGACATCCAGTC
ACCAGATTTCGTGGAGGAGCTGAGGACTTTGGACCCATCTCCCAGTCCTGGCCCACAGGAAGAA
GATGGAGAGGTGGCTCTGGTGCTCCTTGGCAGGCCCTCACCTGGCACTGTGGGCCCTGAAGACA
TGACGCTATGCAGTAGTCGTCGGGCCATGCGGCCAGGACGCCGGGGCCTGGGCCCTGTGCCCTC
CTAGGGCCAGGTGCTTCCCCAGACTTAGGGTGGGGAGCCTGCCAGCTTCATCACCTCCCCTACC
CCAGGTCTTTTAGCCTTGGTGTTAGCATTTTAAAGAGACCCCTCAGGAGTTATGGCTTCTGATT
AACTGCCCCCATAGCCGGGATCTCGTGGCGAGACTGTAACTAGTGATGTTTGTACAACCAAAGA
CTCTATTTTGTGGTTTAAGAAGAATAAAGTTAACTACGTTTTA

hide sequence

RefSeq Acc Id:

XM_006241818 ⟹ XP_006241880

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	7	109,640,034 - 109,663,354 (-)	NCBI
mRatBN7.2	7	107,759,343 - 107,782,360 (-)	NCBI
Rnor_6.0	7	117,105,810 - 117,128,800 (-)	NCBI
Rnor_5.0	7	117,091,481 - 117,114,469 (-)	NCBI

Sequence:

show sequence

TTCCGGCTGCGGTGCTGCGGGCGGATGAGCTGCTAGGTGAGCAGGCCGGGCGGGATGCGGAGCC
GCCGCCGCGCCCCCACCGCCTAAGAAAGCGCTGCCGGGTCAGGCCGCGCTGCCAGCTGTGTGCC
GCCATTCGAGCCTACAGCTCGTATTGAACGCGGGCCGAGCCTAGCGCCGACCCCGGCCGCAGTC
CGGGTCCGGGCTGCCCGCCCCACCCCCGCGCGCGCCGCTCCGCCCGCGCTCGGCGCTCATGCGG
GCCGAGCCCCGCCCCCCGGCCCGAGCCCGCCGAGCGCCTCCCGAGCCCGCGCTCACTGCCGGCC
CGCATCATGCTGAAGTGCATCCCGCTCTGGCGTTGCAACCGGCACGTGGAGTCGGTGGATAAGC
GGCATTGCTCGCTGCAGGTTGTACCAGAGGAGATTTACCGCTACAGTCGTAGCCTGGAGGAGCT
GCTCCTCGACGCCAACCAGCTGCGCGAGCTACCTAAGCCCTTCTTCCGGCTATTGAACTTGCGG
AAGTTGGGCCTCAGTGACAACGAGATCCAGCGGCTGCCTCCTGAAGTGGCTAACTTCATGCAAC
TGGTGGAGCTGGATGTGTCCCGGAATGATATCCCCGAGATACCTGAGAGCATAAAGTTCTGTAA
GGCTCTGGAGATTGCAGACTTCAGCGGGAACCCCCTCTCCAGGCTTCCCGATGGCTTCACACAG
CTGCGCAGCCTGGCTCACCTGGCTCTGAATGATGTGTCCCTGCAGGCACTGCCTGGAGATGTGG
GCAACCTGGCCAATTTGGTGACCTTGGAACTGCGGGAGAACCTGCTTAAATCTCTCCCTGCGTC
CCTGTCTTTCCTTGTGAAGCTAGAACAGCTGGATCTGGGAGGCAATGACCTGGAAGTGCTGCCT
GACACTCTGGGGGCTCTGCCTAACCTACGGGAGCTGTGGCTAGACCGAAACCAACTGTCAGCGC
TGCCCCCGGAGCTAGGCAACCTGCGGCGGCTGGTATGCCTGGACGTGTCAGAGAACAGGCTGGA
GGAGCTACCCGTGGAGCTGGGTGGGCTGGCACTGCTCACAGATCTGCTGCTTTCCCAGAATTTG
CTTCAGCGGCTGCCAGAGGGCATTGGTCAGCTGAAGCAGCTGTCTATCCTGAAGGTGGACCAGA
ACCGGCTATGTGAGGTCACTGAGGCCATAGGGGACTGTGAGAACCTCTCGGAACTGATCCTCAC
AGAGAACCTGTTAACGGCTTTACCCCGCTCTCTGGGCAAACTGACCAAACTGACGAACCTTAAT
GTGGACCGGAATCATCTTGAGGTGCTGCCACCTGAAATCGGAGGCTGCGTAGCCCTTAGTGTCC
TCTCCTTGAGAGACAATCGCCTGGCTGTCCTTCCTCCTGAGCTTGCCCATACAGCTGAGCTGCA
TGTGCTTGACGTAGCTGGGAACCGGCTGCGGAGTCTGCCGTTTGCACTCACCCACCTCAACCTC
AAGGCACTGTGGCTGGCTGAGAACCAGGCACAACCCATGCTCCGCTTCCAGACCGAGGATGATG
CCCAAACTGGTGAAAAGGTGCTTACCTGCTACCTGCTGCCCCAGCAGCCCTTGCCAAGTCTCGA
AGACCCTGGACAGCAGAGCAGTCCCTCAGAGAGCTGCAGTGATGCCCCTCTGAGCCGTGTCAGT
GTCATCCAGTTTGAGGACCCCCTTGAAGGTGAAGAAGATGCTGAGGAAGCTGCAGCCGAGAAGC
GGGGCCTACAGCGTAGGGCCACACCTCATCCCAGTGAGCTCAAGGTGATGAAGAGGGGCATTGA
GGAGCGCCGAAACGAGGCCTTCGTCTGCAAGCCTGACCCCAGCCCACCCTCACCTTCAGAGGAG
GAGAGGAGGCTGAGCGCAGAGTCTGCCCTGAGTGGTAACTCTGTCCCGTCGGCAAGCACAGCCT
CCGATGGTGAACCTGAGACCCTCCCGGCTGAGGTACAAGGGCTAGGCCAGCAAGAGGCCATGCC
TGGTCAGGAAGAGTATCCAGAGGAAGACTATAATGAGCCCACAGTGCACTTTGCAGAGGACACA
CTGATCCCTAGGGAAGATGGTGAAGGTGAAGAGGGACAGCCCGAGGCTCCCTGGCCGCTGCCCA
GTGGCCGACAGAGGCTCATCCGCAAAGACACACCCCACTACAAGAAGCACTTCAAGATCTCTAA
GCTCCCACAGCCCGAAGCTGTTGTGGCCCTGCTGCAAGGGGTGCAGACAGACAGGGAGGGCCCC
ACTGCGGGTTGGCACAATGGCCCACACACACCTTGGGCTCCTCGAGCCCATGAGGAGGAAGAGG
AGGAGGAGAACAGGGATGAAGAAGAAGGCGAGGCCAGCATGGAAGAAGATGACAAAGAAGAGGC
TGTGGCTTCTGCTCCCTCTGTCAAGGGGGTGTCGTTTGACCAGGCCAATAACCTGCTGATAGAG
CCTGCTCGCATTGAGGAGGAAGAGTTAACACTCACGATCGTGCGGCAGACAGGGGGCCTGGGCA
TCAGCATCGCAGGGGGAAAGGGCTCTACCCCCTACAAAGGAGACGATGAGGGCATTTTCATCTC
TCGAGTGTCTGAGGAGGGTCCTGCAGCCCATGCTGGAGTCCGAGTCGGTGACAAACTTCTCGAG
GTGAATGGTGTGGCCTTGCAAGATGCAGAACACCATGAGGCTGTGGAAGCACTTCGGGGGGCCG
GTGCTGCTGTGCAAATGCGAGTGTGGAGGGAAAGAATGGTGGAGCCTGAGAATGCAGTCACCAT
CACCCCTCTCCGCCCTGAAGATGACTATAGTCCCCGGGAGTGGCGGGGAGGGGGCCTGCGCCTG
CCCCTGCTTCAGCCAGAGACTCCTGTACCCCTCCGCCAGCGCCACGCTGCCTGTCTTGTGCGCA
GTGAAAAGGGGCTGGGCTTCAGCATTGCTGGTGGGAAGGGCTCCACACCTTACCGGGCTGGCGA
TGCGGGCATTTTTATATCTCGCATTGCAGAGGGAGGGGCTGCCCACCGGGCAGGCACTCTACAG
GTTGGCGACCGTGTTCTCTCGATCAATGGAGTGGACATGACTGAGGCACGGCACGATCATGCTG
TCTCCCTGCTGACTGCTGCTTCCACTACCATCTCCCTGCTTCTGGAGAGGGAAACTGGAGGGGC
TTATCCACCCAGCCCCCCACCACATTCCTCTTCAACCCCTACTGCTACTGTTGCTGCTACCATG
ACCACTGCCATCCCCGGAGAACCTCTGCTACCTAGACTGTCCCCTAGCCTCTTGGCCACTGCCT
TGGAAGGACCATACCCTGTGGAGGAAATTTGCCTGCCCAGGGCTGGTGGCCCATTGGGGCTTAG
CATTGTAGGAGGTTCTGATCACTCCAGCCATCCGTTTGGTGTCCAGGATCCTGGTGTATTCATC
TCCAAGGTGCTTCCTCGGGGCCTTGCTGCTCGCTGTGGCCTTCGGGTTGGGGACCGCATCCTAG
CAGTGAATGGGCAGGATGTTCGGGAGGCCACACATCAGGAGGCAGTTAGTGCCCTGCTCAGGCC
CTGCCTGGAGCTGTGTCTGCTTGTACGGAGGGACCCACCACCCCCAGGCATGCGGGAACTCTGC
ATCCAGAAGGCCCCTGGAGAGAAGCTGGGTATCAGCATCCGAGGAGGCGCCAAGGGTCATGCGG
GGAACCCGTGTGATCCTACAGATGAGGGCATCTTTATCTCCAAGGTGAGCCCTACAGGAGCTGC
CGGGCGTGACGGGCGGCTGCGTGTGGGGCTGCGGCTGCTAGAAGTGAACCAACAGAGCCTCCTG
GGCCTCACGCATGCTGAGGCGGTGCAGCTGCTGCGCAGCGTGGGTGACACCCTCACCGTGCTTG
TCTGTGATGGCTTTGACACCAGCACCACCACAGCCCTGGAGGTGTCCCCAGGTGTCATAGCCAA
CCCATTTGCAGCAGGCCTTGGCCACAGGAACAGTCTGGAAAGCATTTCATCCATTGACCGGGAG
CTGAGTCCTGAAGGCCCAGGCAAGGAGAAAGAGCTGGCCAGTCAAACCCTACCCTGGGAGCCTG
AGTCTGCAGAGACCACGGGTCGGAATCAAGAGCCCCTCAAGCTGGATTACCGTGTCCTGGCTGC
TGTGCCCAGTGCTGGGAGTTTGCAAAGAGGACCCTGTGCGACCACTGGAGGGAAGATGACTGAG
GCCCCCTCTTCCCCTGGCAGTCAGCAAACAAAACCGGGGGTGATCCAGCCATTGGCTCAGGCCT
GGCCAAGGGACTCCCCAGCCCCCAGGGGCAGAGATGGTCCCTGTTCTCCGCCCTCCCCTGACGA
ACTGCCAGCCAATGTGAAGCAGGCGTACAGGGCCTTCGCAGCTGTGCCCACCGTACATCCTCCT
GAGAACAGTGCTACCCAGCCTCCAACACCTGGTCCCGCAGCCTCCCCAGAGCAGCTGTCCTTCC
GTGAACGACAAAAGTACTTTGAGCTGGAGGTACGGGTGCCTCAAGCAGAGGGTCCCCCAAAGCG
TGTGTCCCTGGTGGGTGCTGACGACTTGCGGAAGATGCAGGAGGAGGAAGCTCGCAAGCTGCAG
CAGAAGAGGGCACAGATGCTTCGGGAAGAGGCAGTAACCTCAGGACCTGACACGGGGCTCGCCT
CAGACAGGGAGTCCCTGGATGATGAGCAGGAGGCTGAGCAGCCCTGGGCCGGGCCAAGCCATGC
AGGAGGCCTCAGCCCCTCTTCACCCACACCCCTGGGAGGCAGCGCCCCTGTGAGGACAGCCAAA
GCTGAGCGACGTCATCAGGAGCGGCTGCGTATGCAGAGCCCTGAGCTGCCCGCCCCAGAGCGGG
CCCTGTCTCCTGCAGAGCGAAGGGCTCTAGAGGCCGAGAAGCGAGCACTGTGGAGAGCAGCCAG
AATGAAGTCTCTGGAGCAGGATGCCCTCCGTGCACAGATGGTCCTCAGCAAGTCCCAGGAAGGC
CGTGGCAAGAGAGGACCCTTGGAGCGGCTGGCTGAGGCCCCTTCACCTGCACCCACACCATCAC
CTACACCATTAGAAGACTTTGGCCTCCAGACCAGTACCTCCCCTGGACGCTTGTCACCAGATTT
CGTGGAGGAGCTGAGGACTTTGGACCCATCTCCCAGTCCTGGCCCACAGGAAGAAGATGGAGAG
GTGGCTCTGGTGCTCCTTGGCAGGCCCTCACCTGGCACTGTGGGCCCTGAAGACATGACGCTAT
GCAGTAGTCGTCGGGCCATGCGGCCAGGACGCCGGGGCCTGGGCCCTGTGCCCTCCTAGGGCCA
GGTGCTTCCCCAGACTTAGGGTGGGGAGCCTGCCAGCTTCATCACCTCCCCTACCCCAGGTCTT
TTAGCCTTGGTGTTAGCATTTTAAAGAGACCCCTCAGGAGTTATGGCTTCTGATTAACTGCCCC
CATAGCCGGGATCTCGTGGCGAGACTGTAACTAGTGATGTTTGTACAACCAAAGACTCTATTTT
GTGGTTTAAGAAGAATAAAGTTAACTACGTTTTA

hide sequence

RefSeq Acc Id:

XM_006241819 ⟹ XP_006241881

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	7	109,640,034 - 109,663,354 (-)	NCBI
mRatBN7.2	7	107,759,343 - 107,782,360 (-)	NCBI
Rnor_6.0	7	117,105,810 - 117,128,800 (-)	NCBI
Rnor_5.0	7	117,091,481 - 117,114,469 (-)	NCBI

Sequence:

show sequence

TTCCGGCTGCGGTGCTGCGGGCGGATGAGCTGCTAGGTGAGCAGGCCGGGCGGGATGCGGAGCC
GCCGCCGCGCCCCCACCGCCTAAGAAAGCGCTGCCGGGTCAGGCCGCGCTGCCAGCTGTGTGCC
GCCATTCGAGCCTACAGCTCGTATTGAACGCGGGCCGAGCCTAGCGCCGACCCCGGCCGCAGTC
CGGGTCCGGGCTGCCCGCCCCACCCCCGCGCGCGCCGCTCCGCCCGCGCTCGGCGCTCATGCGG
GCCGAGCCCCGCCCCCCGGCCCGAGCCCGCCGAGCGCCTCCCGAGCCCGCGCTCACTGCCGGCC
CGCATCATGCTGAAGTGCATCCCGCTCTGGCGTTGCAACCGGCACGTGGAGTCGGTGGATAAGC
GGCATTGCTCGCTGCAGGTTGTACCAGAGGAGATTTACCGCTACAGTCGTAGCCTGGAGGAGCT
GCTCCTCGACGCCAACCAGCTGCGCGAGCTACCTAAGCCCTTCTTCCGGCTATTGAACTTGCGG
AAGTTGGGCCTCAGTGACAACGAGATCCAGCGGCTGCCTCCTGAAGTGGCTAACTTCATGCAAC
TGGTGGAGCTGGATGTGTCCCGGAATGATATCCCCGAGATACCTGAGAGCATAAAGTTCTGTAA
GGCTCTGGAGATTGCAGACTTCAGCGGGAACCCCCTCTCCAGGCTTCCCGATGGCTTCACACAG
CTGCGCAGCCTGGCTCACCTGGCTCTGAATGATGTGTCCCTGCAGGCACTGCCTGGAGATGTGG
GCAACCTGGCCAATTTGGTGACCTTGGAACTGCGGGAGAACCTGCTTAAATCTCTCCCTGCGTC
CCTGTCTTTCCTTGTGAAGCTAGAACAGCTGGATCTGGGAGGCAATGACCTGGAAGTGCTGCCT
GACACTCTGGGGGCTCTGCCTAACCTACGGGAGCTGTGGCTAGACCGAAACCAACTGTCAGCGC
TGCCCCCGGAGCTAGGCAACCTGCGGCGGCTGGTATGCCTGGACGTGTCAGAGAACAGGCTGGA
GGAGCTACCCGTGGAGCTGGGTGGGCTGGCACTGCTCACAGATCTGCTGCTTTCCCAGAATTTG
CTTCAGCGGCTGCCAGAGGGCATTGGTCAGCTGAAGCAGCTGTCTATCCTGAAGGTGGACCAGA
ACCGGCTATGTGAGGTCACTGAGGCCATAGGGGACTGTGAGAACCTCTCGGAACTGATCCTCAC
AGAGAACCTGTTAACGGCTTTACCCCGCTCTCTGGGCAAACTGACCAAACTGACGAACCTTAAT
GTGGACCGGAATCATCTTGAGGTGCTGCCACCTGAAATCGGAGGCTGCGTAGCCCTTAGTGTCC
TCTCCTTGAGAGACAATCGCCTGGCTGTCCTTCCTCCTGAGCTTGCCCATACAGCTGAGCTGCA
TGTGCTTGACGTAGCTGGGAACCGGCTGCGGAGTCTGCCGTTTGCACTCACCCACCTCAACCTC
AAGGCACTGTGGCTGGCTGAGAACCAGGCACAACCCATGCTCCGCTTCCAGACCGAGGATGATG
CCCAAACTGGTGAAAAGGTGCTTACCTGCTACCTGCTGCCCCAGCAGCCCTTGCCAAGTCTCGA
AGACCCTGGACAGCAGAGCAGTCCCTCAGAGAGCTGCAGTGATGCCCCTCTGAGCCGTGTCAGT
GTCATCCAGTTTGAGGACCCCCTTGAAGGTGAAGAAGATGCTGAGGAAGCTGCAGCCGAGAAGC
GGGGCCTACAGCGTAGGGCCACACCTCATCCCAGTGAGCTCAAGGTGATGAAGAGGGGCATTGA
GGAGCGCCGAAACGAGGCCTTCGTCTGCAAGCCTGACCCCAGCCCACCCTCACCTTCAGAGGAG
GAGAGGAGGCTGAGCGCAGAGTCTGCCCTGAGTGGTAACTCTGTCCCGTCGGCAAGCACAGCCT
CCGATGGTGAACCTGAGACCCTCCCGGCTGAGGTACAAGGGCTAGGCCAGCAAGAGGCCATGCC
TGGTCAGGAAGAGTATCCAGAGGAAGACTATAATGAGCCCACAGTGCACTTTGCAGAGGACACA
CTGATCCCTAGGGAAGATGGTGAAGGTGAAGAGGGACAGCCCGAGGCTCCCTGGCCGCTGCCCA
GTGGCCGACAGAGGCTCATCCGCAAAGACACACCCCACTACAAGAAGCACTTCAAGATCTCTAA
GCTCCCACAGCCCGAAGCTGTTGTGGCCCTGCTGCAAGGGGTGCAGACAGACAGGGAGGGCCCC
ACTGCGGGTTGGCACAATGGCCCACACACACCTTGGGCTCCTCGAGCCCATGAGGAGGAAGAGG
AGGAGGAGAACAGGGATGAAGAAGAAGGCGAGGCCAGCATGGAAGAAGATGACAAAGAAGAGGC
TGTGGCTTCTGCTCCCTCTGTCAAGGGGGTGTCGTTTGACCAGGCCAATAACCTGCTGATAGAG
CCTGCTCGCATTGAGGAGGAAGAGTTAACACTCACGATCGTGCGGCAGACAGGGGGCCTGGGCA
TCAGCATCGCAGGGGGAAAGGGCTCTACCCCCTACAAAGGAGACGATGAGGGCATTTTCATCTC
TCGAGTGTCTGAGGAGGGTCCTGCAGCCCATGCTGGAGTCCGAGTCGGTGACAAACTTCTCGAG
GTGAATGGTGTGGCCTTGCAAGATGCAGAACACCATGAGGCTGTGGAAGCACTTCGGGGGGCCG
GTGCTGCTGTGCAAATGCGAGTGTGGAGGGAAAGAATGGTGGAGCCTGAGAATGCAGTCACCAT
CACCCCTCTCCGCCCTGAAGATGACTATAGTCCCCGGGAGTGGCGGGGAGGGGGCCTGCGCCTG
CCCCTGCTTCAGCCAGAGACTCCTGTACCCCTCCGCCAGCGCCACGCTGCCTGTCTTGTGCGCA
GTGAAAAGGGGCTGGGCTTCAGCATTGCTGGTGGGAAGGGCTCCACACCTTACCGGGCTGGCGA
TGCGGGCATTTTTATATCTCGCATTGCAGAGGGAGGGGCTGCCCACCGGGCAGGCACTCTACAG
GTTGGCGACCGTGTTCTCTCGATCAATGGAGTGGACATGACTGAGGCACGGCACGATCATGCTG
TCTCCCTGCTGACTGCTGCTTCCACTACCATCTCCCTGCTTCTGGAGAGGGAAACTGGAGGGGC
TTATCCACCCAGCCCCCCACCACATTCCTCTTCAACCCCTACTGCTACTGTTGCTGCTACCATG
ACCACTGCCATCCCCGGAGAACCTCTGCTACCTAGACTGTCCCCTAGCCTCTTGGCCACTGCCT
TGGAAGGACCATACCCTGTGGAGGAAATTTGCCTGCCCAGGGCTGGTGGCCCATTGGGGCTTAG
CATTGTAGGAGGTTCTGATCACTCCAGCCATCCGTTTGGTGTCCAGGATCCTGGTGTATTCATC
TCCAAGGTGCTTCCTCGGGGCCTTGCTGCTCGCTGTGGCCTTCGGGTTGGGGACCGCATCCTAG
CAGTGAATGGGCAGGATGTTCGGGAGGCCACACATCAGGAGGCAGTTAGTGCCCTGCTCAGGCC
CTGCCTGGAGCTGTGTCTGCTTGTACGGAGGGACCCACCACCCCCAGGCATGCGGGAACTCTGC
ATCCAGAAGGCCCCTGGAGAGAAGCTGGGTATCAGCATCCGAGGAGGCGCCAAGGGTCATGCGG
GGAACCCGTGTGATCCTACAGATGAGGGCATCTTTATCTCCAAGGTGAGCCCTACAGGAGCTGC
CGGGCGTGACGGGCGGCTGCGTGTGGGGCTGCGGCTGCTAGAAGTGAACCAACAGAGCCTCCTG
GGCCTCACGCATGCTGAGGCGGTGCAGCTGCTGCGCAGCGTGGGTGACACCCTCACCGTGCTTG
TCTGTGATGGCTTTGACACCAGCACCACCACAGCCCTGGAGGTGTCCCCAGGTGTCATAGCCAA
CCCATTTGCAGCAGGCCTTGGCCACAGGAACAGTCTGGAAAGCATTTCATCCATTGACCGGGAG
CTGAGTCCTGAAGGCCCAGGCAAGGAGAAAGAGCTGGCCAGTCAAACCCTACCCTGGGAGCCTG
AGTCTGCAGAGACCACGGGTCGGAATCAAGAGCCCCTCAAGCTGGATTACCGTGTCCTGGCTGC
TGTGCCCAGTGCTGGGAGTTTGCAAAGAGGACCCTGTGCGACCACTGGAGGGAAGATGACTGAG
GCCCCCTCTTCCCCTGGCAGTCAGCAACCGCCCTCCCCTGACGAACTGCCAGCCAATGTGAAGC
AGGCGTACAGGGCCTTCGCAGCTGTGCCCACCGTACATCCTCCTGAGAACAGTGCTACCCAGCC
TCCAACACCTGGTCCCGCAGCCTCCCCAGAGCAGCTGTCCTTCCGTGAACGACAAAAGTACTTT
GAGCTGGAGGTACGGGTGCCTCAAGCAGAGGGTCCCCCAAAGCGTGTGTCCCTGGTGGGTGCTG
ACGACTTGCGGAAGATGCAGGAGGAGGAAGCTCGCAAGCTGCAGCAGAAGAGGGCACAGATGCT
TCGGGAAGAGGCAGTAACCTCAGGACCTGACACGGGGCTCGCCTCAGACAGGGAGTCCCTGGAT
GATGAGCAGGAGGCTGAGCAGCCCTGGGCCGGGCCAAGCCATGCAGGAGGCCTCAGCCCCTCTT
CACCCACACCCCTGGGAGGCAGCGCCCCTGTGAGGACAGCCAAAGCTGAGCGACGTCATCAGGA
GCGGCTGCGTATGCAGAGCCCTGAGCTGCCCGCCCCAGAGCGGGCCCTGTCTCCTGCAGAGCGA
AGGGCTCTAGAGGCCGAGAAGCGAGCACTGTGGAGAGCAGCCAGAATGAAGTCTCTGGAGCAGG
ATGCCCTCCGTGCACAGATGGTCCTCAGCAAGTCCCAGGAAGGCCGTGGCAAGAGAGGACCCTT
GGAGCGGCTGGCTGAGGCCCCTTCACCTGCACCCACACCATCACCTACACCATTAGAAGACTTT
GGCCTCCAGACCAGTACCTCCCCTGGACGCTTGTCACCAGATTTCGTGGAGGAGCTGAGGACTT
TGGACCCATCTCCCAGTCCTGGCCCACAGGAAGAAGATGGAGAGGTGGCTCTGGTGCTCCTTGG
CAGGCCCTCACCTGGCACTGTGGGCCCTGAAGACATGACGCTATGCAGTAGTCGTCGGGCCATG
CGGCCAGGACGCCGGGGCCTGGGCCCTGTGCCCTCCTAGGGCCAGGTGCTTCCCCAGACTTAGG
GTGGGGAGCCTGCCAGCTTCATCACCTCCCCTACCCCAGGTCTTTTAGCCTTGGTGTTAGCATT
TTAAAGAGACCCCTCAGGAGTTATGGCTTCTGATTAACTGCCCCCATAGCCGGGATCTCGTGGC
GAGACTGTAACTAGTGATGTTTGTACAACCAAAGACTCTATTTTGTGGTTTAAGAAGAATAAAG
TTAACTACGTTTTA

hide sequence

RefSeq Acc Id:

XM_008765578 ⟹ XP_008763800

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	7	109,640,034 - 109,663,354 (-)	NCBI
mRatBN7.2	7	107,759,343 - 107,782,361 (-)	NCBI
Rnor_6.0	7	117,105,810 - 117,128,800 (-)	NCBI

Sequence:

show sequence

TTCCGGCTGCGGTGCTGCGGGCGGATGAGCTGCTAGGTGAGCAGGCCGGGCGGGATGCGGAGCC
GCCGCCGCGCCCCCACCGCCTAAGAAAGCGCTGCCGGGTCAGGCCGCGCTGCCAGCTGTGTGCC
GCCATTCGAGCCTACAGCTCGTATTGAACGCGGGCCGAGCCTAGCGCCGACCCCGGCCGCAGTC
CGGGTCCGGGCTGCCCGCCCCACCCCCGCGCGCGCCGCTCCGCCCGCGCTCGGCGCTCATGCGG
GCCGAGCCCCGCCCCCCGGCCCGAGCCCGCCGAGCGCCTCCCGAGCCCGCGCTCACTGCCGGCC
CGCATCATGCTGAAGTGCATCCCGCTCTGGCGTTGCAACCGGCACGTGGAGTCGGTGGATAAGC
GGCATTGCTCGCTGCAGGTTGTACCAGAGGAGATTTACCGCTACAGTCGTAGCCTGGAGGAGCT
GCTCCTCGACGCCAACCAGCTGCGCGAGCTACCTAAGCCCTTCTTCCGGCTATTGAACTTGCGG
AAGTTGGGCCTCAGTGACAACGAGATCCAGCGGCTGCCTCCTGAAGTGGCTAACTTCATGCAAC
TGGTGGAGCTGGATGTGTCCCGGAATGATATCCCCGAGATACCTGAGAGCATAAAGTTCTGTAA
GGCTCTGGAGATTGCAGACTTCAGCGGGAACCCCCTCTCCAGGCTTCCCGATGGCTTCACACAG
CTGCGCAGCCTGGCTCACCTGGCTCTGAATGATGTGTCCCTGCAGGCACTGCCTGGAGATGTGG
GCAACCTGGCCAATTTGGTGACCTTGGAACTGCGGGAGAACCTGCTTAAATCTCTCCCTGCGTC
CCTGTCTTTCCTTGTGAAGCTAGAACAGCTGGATCTGGGAGGCAATGACCTGGAAGTGCTGCCT
GACACTCTGGGGGCTCTGCCTAACCTACGGGAGCTGTGGCTAGACCGAAACCAACTGTCAGCGC
TGCCCCCGGAGCTAGGCAACCTGCGGCGGCTGGTATGCCTGGACGTGTCAGAGAACAGGCTGGA
GGAGCTACCCGTGGAGCTGGGTGGGCTGGCACTGCTCACAGATCTGCTGCTTTCCCAGAATTTG
CTTCAGCGGCTGCCAGAGGGCATTGGTCAGCTGAAGCAGCTGTCTATCCTGAAGGTGGACCAGA
ACCGGCTATGTGAGGTCACTGAGGCCATAGGGGACTGTGAGAACCTCTCGGAACTGATCCTCAC
AGAGAACCTGTTAACGGCTTTACCCCGCTCTCTGGGCAAACTGACCAAACTGACGAACCTTAAT
GTGGACCGGAATCATCTTGAGGTGCTGCCACCTGAAATCGGAGGCTGCGTAGCCCTTAGTGTCC
TCTCCTTGAGAGACAATCGCCTGGCTGTCCTTCCTCCTGAGCTTGCCCATACAGCTGAGCTGCA
TGTGCTTGACGTAGCTGGGAACCGGCTGCGGAGTCTGCCGTTTGCACTCACCCACCTCAACCTC
AAGGCACTGTGGCTGGCTGAGAACCAGGCACAACCCATGCTCCGCTTCCAGACCGAGGATGATG
CCCAAACTGGTGAAAAGGTGCTTACCTGCTACCTGCTGCCCCAGCAGCCCTTGCCAAGTCTCGA
AGACCCTGGACAGCAGAGCAGTCCCTCAGAGAGCTGCAGTGATGCCCCTCTGAGCCGTGTCAGT
GTCATCCAGTTTGAGGACCCCCTTGAAGGTGAAGAAGATGCTGAGGAAGCTGCAGCCGAGAAGC
GGGGCCTACAGCGTAGGGCCACACCTCATCCCAGTGAGCTCAAGGTGATGAAGAGGGGCATTGA
GGAGCGCCGAAACGAGGCCTTCGTCTGCAAGCCTGACCCCAGCCCACCCTCACCTTCAGAGGAG
GAGAGGAGGCTGAGCGCAGAGTCTGCCCTGAGTGGTAACTCTGTCCCGTCGGCAAGCACAGCCT
CCGATGGTGAACCTGAGACCCTCCCGGCTGAGGTACAAGGGCTAGGCCAGCAAGAGGCCATGCC
TGGTCAGGAAGAGTATCCAGAGGAAGACTATAATGAGCCCACAGTGCACTTTGCAGAGGACACA
CTGATCCCTAGGGAAGATGGTGAAGGTGAAGAGGGACAGCCCGAGGCTCCCTGGCCGCTGCCCA
GTGGCCGACAGAGGCTCATCCGCAAAGACACACCCCACTACAAGAAGCACTTCAAGATCTCTAA
GCTCCCACAGCCCGAAGCTGTTGTGGCCCTGCTGCAAGGGGTGCAGACAGACAGGGAGGGCCCC
ACTGCGGGTTGGCACAATGGCCCACACACACCTTGGGCTCCTCGAGCCCATGAGGAGGAAGAGG
AGGAGGAGAACAGGGATGAAGAAGAAGGCGAGGCCAGCATGGAAGAAGATGACAAAGAAGAGGC
TGTGGCTTCTGCTCCCTCTGTCAAGGGGGTGTCGTTTGACCAGGCCAATAACCTGCTGATAGAG
CCTGCTCGCATTGAGGAGGAAGAGTTAACACTCACGATCGTGCGGCAGACAGGGGGCCTGGGCA
TCAGCATCGCAGGGGGAAAGGGCTCTACCCCCTACAAAGGAGACGATGAGGGCATTTTCATCTC
TCGAGTGTCTGAGGAGGGTCCTGCAGCCCATGCTGGAGTCCGAGTCGGTGACAAACTTCTCGAG
GTGAATGGTGTGGCCTTGCAAGATGCAGAACACCATGAGGCTGTGGAAGCACTTCGGGGGGCCG
GTGCTGCTGTGCAAATGCGAGTGTGGAGGGAAAGAATGGTGGAGCCTGAGAATGCAGTCACCAT
CACCCCTCTCCGCCCTGAAGATGACTATAGTCCCCGGGAGTGGCGGGGAGGGGGCCTGCGCCTG
CCCCTGCTTCAGCCAGAGACTCCTGTACCCCTCCGCCAGCGCCACGCTGCCTGTCTTGTGCGCA
GTGAAAAGGGGCTGGGCTTCAGCATTGCTGGTGGGAAGGGCTCCACACCTTACCGGGCTGGCGA
TGCGGGCATTTTTATATCTCGCATTGCAGAGGGAGGGGCTGCCCACCGGGCAGGCACTCTACAG
GTTGGCGACCGTGTTCTCTCGATCAATGGAGTGGACATGACTGAGGCACGGCACGATCATGCTG
TCTCCCTGCTGACTGCTGCTTCCACTACCATCTCCCTGCTTCTGGAGAGGGAAACTGGAGGGGC
TTATCCACCCAGCCCCCCACCACATTCCTCTTCAACCCCTACTGCTACTGTTGCTGCTACCATG
ACCACTGCCATCCCCGGAGAACCTCTGCTACCTAGACTGTCCCCTAGCCTCTTGGCCACTGCCT
TGGAAGGACCATACCCTGTGGAGGAAATTTGCCTGCCCAGGGCTGGTGGCCCATTGGGGCTTAG
CATTGTAGGAGGTTCTGATCACTCCAGCCATCCGTTTGGTGTCCAGGATCCTGGTGTATTCATC
TCCAAGGTGCTTCCTCGGGGCCTTGCTGCTCGCTGTGGCCTTCGGGTTGGGGACCGCATCCTAG
CAGTGAATGGGCAGGATGTTCGGGAGGCCACACATCAGGAGGCAGTTAGTGCCCTGCTCAGGCC
CTGCCTGGAGCTGTGTCTGCTTGTACGGAGGGACCCACCACCCCCAGGCATGCGGGAACTCTGC
ATCCAGAAGGCCCCTGGAGAGAAGCTGGGTATCAGCATCCGAGGAGGCGCCAAGGGTCATGCGG
GGAACCCGTGTGATCCTACAGATGAGGGCATCTTTATCTCCAAGGTGAGCCCTACAGGAGCTGC
CGGGCGTGACGGGCGGCTGCGTGTGGGGCTGCGGCTGCTAGAAGTGAACCAACAGAGCCTCCTG
GGCCTCACGCATGCTGAGGCGGTGCAGCTGCTGCGCAGCGTGGGTGACACCCTCACCGTGCTTG
TCTGTGATGGCTTTGACACCAGCACCACCACAGCCCTGGAGGTGTCCCCAGGTGTCATAGCCAA
CCCATTTGCAGCAGGCCTTGGCCACAGGAACAGTCTGGAAAGCATTTCATCCATTGACCGGGAG
CTGAGTCCTGAAGGCCCAGGCAAGGAGAAAGAGCTGGCCAGTCAAACCCTACCCTGGGAGCCTG
AGTCTGCAGAGACCACGGGTCGGAATCAAGAGCCCCTCAAGCTGGATTACCGTGTCCTGGCTGC
TGTGCCCAGTGCTGGGAGTTTGCAAAGAGGACCCTGTGCGACCACTGGAGGGAAGATGACTGAG
GCCCCCTCTTCCCCTGGCAGTCAGCAACCGCCCTCCCCTGACGAACTGCCAGCCAATGTGAAGC
AGGCGTACAGGGCCTTCGCAGCTGTGCCCACCGTACATCCTCCTGAGAACAGTGCTACCCAGCC
TCCAACACCTGGTCCCGCAGCCTCCCCAGAGCAGCTGTCCTTCCGTGAACGACAAAAGTACTTT
GAGCTGGAGGTACGGGTGCCTCAAGCAGAGGGTCCCCCAAAGCGTGTGTCCCTGGTGGGTGCTG
ACGACTTGCGGAAGATGCAGGAGGAGGAAGCTCGCAAGCTGCAGCAGAAGAGGGCACAGATGCT
TCGGGAAGAGGCAGTAACCTCAGGACCTGACACGGGGCTCGCCTCAGACAGGGAGTCCCTGGAT
GATGAGCAGGAGGCTGAGCAGCCCTGGGCCGGGCCAAGCCATGCAGGAGGCCTCAGCCCCTCTT
CACCCACACCCCTGGGAGGCAGCGCCCCTGTGAGGACAGCCAAAGCTGAGCGACGTCATCAGGA
GCGGCTGCGTATGCAGAGCCCTGAGCTGCCCGCCCCAGAGCGGGCCCTGTCTCCTGCAGAGCGA
AGGGCTCTAGAGGCCGAGAAGCGAGCACTGTGGAGAGCAGCCAGAATGAAGTCTCTGGAGCAGG
ATGCCCTCCGTGCACAGATGGTCCTCAGCAAGTCCCAGGAAGGCCGTGGCAAGAGAGGACCCTT
GGAGCGGCTGGCTGAGGCCCCTTCACCTGCACCCACACCATCACCTACACCATTAGAAGACTTT
GGCCTCCAGACCAGTACCTCCCCTGGACGCTTGCCTTTGTCTGGAAAGAAGTTTGACTACAGGG
CCTTCGCAGCCCTGCCTTCTTCCAGGCCTGTGTATGACATCCAGTCACCAGATTTCGTGGAGGA
GCTGAGGACTTTGGACCCATCTCCCAGTCCTGGCCCACAGGAAGAAGATGGAGAGGTGGCTCTG
GTGCTCCTTGGCAGGCCCTCACCTGGCACTGTGGGCCCTGAAGACATGACGCTATGCAGTAGTC
GTCGGGCCATGCGGCCAGGACGCCGGGGCCTGGGCCCTGTGCCCTCCTAGGGCCAGGTGCTTCC
CCAGACTTAGGGTGGGGAGCCTGCCAGCTTCATCACCTCCCCTACCCCAGGTCTTTTAGCCTTG
GTGTTAGCATTTTAAAGAGACCCCTCAGGAGTTATGGCTTCTGATTAACTGCCCCCATAGCCGG
GATCTCGTGGCGAGACTGTAACTAGTGATGTTTGTACAACCAAAGACTCTATTTTGTGGTTTAA
GAAGAATAAAGTTAACTACGTTTTA

hide sequence

RefSeq Acc Id:

XM_017594968 ⟹ XP_017450457

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	7	109,640,034 - 109,663,354 (-)	NCBI
mRatBN7.2	7	107,759,343 - 107,782,361 (-)	NCBI
Rnor_6.0	7	117,106,336 - 117,128,802 (-)	NCBI

Sequence:

show sequence

GGTTCCGGCTGCGGTGCTGCGGGCGGATGAGCTGCTAGGTGAGCAGGCCGGGCGGGATGCGGAG
CCGCCGCCGCGCCCCCACCGCCTAAGAAAGCGCTGCCGGGTCAGGCCGCGCTGCCAGCTGTGTG
CCGCCATTCGAGCCTACAGCTCGTATTGAACGCGGGCCGAGCCTAGCGCCGACCCCGGCCGCAG
TCCGGGTCCGGGCTGCCCGCCCCACCCCCGCGCGCGCCGCTCCGCCCGCGCTCGGCGCTCATGC
GGGCCGAGCCCCGCCCCCCGGCCCGAGCCCGCCGAGCGCCTCCCGAGCCCGCGCTCACTGCCGG
CCCGCATCATGCTGAAGTGCATCCCGCTCTGGCGTTGCAACCGGCACGTGGAGTCGGTGGATAA
GCGGCATTGCTCGCTGCAGGTTGTACCAGAGGAGATTTACCGCTACAGTCGTAGCCTGGAGGAG
CTGCTCCTCGACGCCAACCAGCTGCGCGAGCTACCTAAGCCCTTCTTCCGGCTATTGAACTTGC
GGAAGTTGGGCCTCAGTGACAACGAGATCCAGCGGCTGCCTCCTGAAGTGGCTAACTTCATGCA
ACTGGTGGAGCTGGATGTGTCCCGGAATGATATCCCCGAGATACCTGAGAGCATAAAGTTCTGT
AAGGCTCTGGAGATTGCAGACTTCAGCGGGAACCCCCTCTCCAGGCTTCCCGATGGCTTCACAC
AGCTGCGCAGCCTGGCTCACCTGGCTCTGAATGATGTGTCCCTGCAGGCACTGCCTGGAGATGT
GGGCAACCTGGCCAATTTGGTGACCTTGGAACTGCGGGAGAACCTGCTTAAATCTCTCCCTGCG
TCCCTGTCTTTCCTTGTGAAGCTAGAACAGCTGGATCTGGGAGGCAATGACCTGGAAGTGCTGC
CTGACACTCTGGGGGCTCTGCCTAACCTACGGGAGCTGTGGCTAGACCGAAACCAACTGTCAGC
GCTGCCCCCGGAGCTAGGCAACCTGCGGCGGCTGGTATGCCTGGACGTGTCAGAGAACAGGCTG
GAGGAGCTACCCGTGGAGCTGGGTGGGCTGGCACTGCTCACAGATCTGCTGCTTTCCCAGAATT
TGCTTCAGCGGCTGCCAGAGGGCATTGGTCAGCTGAAGCAGCTGTCTATCCTGAAGGTGGACCA
GAACCGGCTATGTGAGGTCACTGAGGCCATAGGGGACTGTGAGAACCTCTCGGAACTGATCCTC
ACAGAGAACCTGTTAACGGCTTTACCCCGCTCTCTGGGCAAACTGACCAAACTGACGAACCTTA
ATGTGGACCGGAATCATCTTGAGGTGCTGCCACCTGAAATCGGAGGCTGCGTAGCCCTTAGTGT
CCTCTCCTTGAGAGACAATCGCCTGGCTGTCCTTCCTCCTGAGCTTGCCCATACAGCTGAGCTG
CATGTGCTTGACGTAGCTGGGAACCGGCTGCGGAGTCTGCCGTTTGCACTCACCCACCTCAACC
TCAAGGCACTGTGGCTGGCTGAGAACCAGGCACAACCCATGCTCCGCTTCCAGACCGAGGATGA
TGCCCAAACTGGTGAAAAGGTGCTTACCTGCTACCTGCTGCCCCAGCAGCCCTTGCCAAGTCTC
GACCCTGGACAGCAGAGCAGTCCCTCAGAGAGCTGCAGTGATGCCCCTCTGAGCCGTGTCAGTG
TCATCCAGTTTGAGGACCCCCTTGAAGGTGAAGAAGATGCTGAGGAAGCTGCAGCCGAGAAGCG
GGGCCTACAGCGTAGGGCCACACCTCATCCCAGTGAGCTCAAGGTGATGAAGAGGGGCATTGAG
GAGCGCCGAAACGAGGCCTTCGTCTGCAAGCCTGACCCCAGCCCACCCTCACCTTCAGAGGAGG
AGAGGAGGCTGAGCGCAGAGTCTGCCCTGAGTGGTAACTCTGTCCCGTCGGCAAGCACAGCCTC
CGATGGTGAACCTGAGACCCTCCCGGCTGAGGTACAAGGGCTAGGCCAGCAAGAGGCCATGCCT
GGTCAGGAAGAGTATCCAGAGGAAGACTATAATGAGCCCACAGTGCACTTTGCAGAGGACACAC
TGATCCCTAGGGAAGATGGTGAAGGTGAAGAGGGACAGCCCGAGGCTCCCTGGCCGCTGCCCAG
TGGCCGACAGAGGCTCATCCGCAAAGACACACCCCACTACAAGAAGCACTTCAAGATCTCTAAG
CTCCCACAGCCCGAAGCTGTTGTGGCCCTGCTGCAAGGGGTGCAGACAGACAGGGAGGGCCCCA
CTGCGGGTTGGCACAATGGCCCACACACACCTTGGGCTCCTCGAGCCCATGAGGAGGAAGAGGA
GGAGGAGAACAGGGATGAAGAAGAAGGCGAGGCCAGCATGGAAGAAGATGACAAAGAAGAGGCT
GTGGCTTCTGCTCCCTCTGTCAAGGGGGTGTCGTTTGACCAGGCCAATAACCTGCTGATAGAGC
CTGCTCGCATTGAGGAGGAAGAGTTAACACTCACGATCGTGCGGCAGACAGGGGGCCTGGGCAT
CAGCATCGCAGGGGGAAAGGGCTCTACCCCCTACAAAGGAGACGATGAGGGCATTTTCATCTCT
CGAGTGTCTGAGGAGGGTCCTGCAGCCCATGCTGGAGTCCGAGTCGGTGACAAACTTCTCGAGG
TGAATGGTGTGGCCTTGCAAGATGCAGAACACCATGAGGCTGTGGAAGCACTTCGGGGGGCCGG
TGCTGCTGTGCAAATGCGAGTGTGGAGGGAAAGAATGGTGGAGCCTGAGAATGCAGTCACCATC
ACCCCTCTCCGCCCTGAAGATGACTATAGTCCCCGGGAGTGGCGGGGAGGGGGCCTGCGCCTGC
CCCTGCTTCAGCCAGAGACTCCTGTACCCCTCCGCCAGCGCCACGCTGCCTGTCTTGTGCGCAG
TGAAAAGGGGCTGGGCTTCAGCATTGCTGGTGGGAAGGGCTCCACACCTTACCGGGCTGGCGAT
GCGGGCATTTTTATATCTCGCATTGCAGAGGGAGGGGCTGCCCACCGGGCAGGCACTCTACAGG
TTGGCGACCGTGTTCTCTCGATCAATGGAGTGGACATGACTGAGGCACGGCACGATCATGCTGT
CTCCCTGCTGACTGCTGCTTCCACTACCATCTCCCTGCTTCTGGAGAGGGAAACTGGAGGGGCT
TATCCACCCAGCCCCCCACCACATTCCTCTTCAACCCCTACTGCTACTGTTGCTGCTACCATGA
CCACTGCCATCCCCGGAGAACCTCTGCTACCTAGACTGTCCCCTAGCCTCTTGGCCACTGCCTT
GGAAGGACCATACCCTGTGGAGGAAATTTGCCTGCCCAGGGCTGGTGGCCCATTGGGGCTTAGC
ATTGTAGGAGGTTCTGATCACTCCAGCCATCCGTTTGGTGTCCAGGATCCTGGTGTATTCATCT
CCAAGGTGCTTCCTCGGGGCCTTGCTGCTCGCTGTGGCCTTCGGGTTGGGGACCGCATCCTAGC
AGTGAATGGGCAGGATGTTCGGGAGGCCACACATCAGGAGGCAGTTAGTGCCCTGCTCAGGCCC
TGCCTGGAGCTGTGTCTGCTTGTACGGAGGGACCCACCACCCCCAGGCATGCGGGAACTCTGCA
TCCAGAAGGCCCCTGGAGAGAAGCTGGGTATCAGCATCCGAGGAGGCGCCAAGGGTCATGCGGG
GAACCCGTGTGATCCTACAGATGAGGGCATCTTTATCTCCAAGGTGAGCCCTACAGGAGCTGCC
GGGCGTGACGGGCGGCTGCGTGTGGGGCTGCGGCTGCTAGAAGTGAACCAACAGAGCCTCCTGG
GCCTCACGCATGCTGAGGCGGTGCAGCTGCTGCGCAGCGTGGGTGACACCCTCACCGTGCTTGT
CTGTGATGGCTTTGACACCAGCACCACCACAGCCCTGGAGGTGTCCCCAGGTGTCATAGCCAAC
CCATTTGCAGCAGGCCTTGGCCACAGGAACAGTCTGGAAAGCATTTCATCCATTGACCGGGAGC
TGAGTCCTGAAGGCCCAGGCAAGGAGAAAGAGCTGGCCAGTCAAACCCTACCCTGGGAGCCTGA
GTCTGCAGAGACCACGGGTCGGAATCAAGAGCCCCTCAAGCTGGATTACCGTGTCCTGGCTGCT
GTGCCCAGTGCTGGGAGTTTGCAAAGAGGACCCTGTGCGACCACTGGAGGGAAGATGACTGAGG
CCCCCTCTTCCCCTGGCAGTCAGCAAACAAAACCGGGGGTGATCCAGCCATTGGCTCAGGCCTG
GCCAAGGGACTCCCCAGCCCCCAGGGGCAGAGATGGTCCCTGTTCTCCGCCCTCCCCTGACGAA
CTGCCAGCCAATGTGAAGCAGGCGTACAGGGCCTTCGCAGCTGTGCCCACCGTACATCCTCCTG
AGAACAGTGCTACCCAGCCTCCAACACCTGGTCCCGCAGCCTCCCCAGAGCAGCTGTCCTTCCG
TGAACGACAAAAGTACTTTGAGCTGGAGGTACGGGTGCCTCAAGCAGAGGGTCCCCCAAAGCGT
GTGTCCCTGGTGGGTGCTGACGACTTGCGGAAGATGCAGGAGGAGGAAGCTCGCAAGCTGCAGC
AGAAGAGGGCACAGATGCTTCGGGAAGAGGCAGTAACCTCAGGACCTGACACGGGGCTCGCCTC
AGACAGGGAGTCCCTGGATGATGAGCAGGAGGCTGAGCAGCCCTGGGCCGGGCCAAGCCATGCA
GGAGGCCTCAGCCCCTCTTCACCCACACCCCTGGGAGGCAGCGCCCCTGTGAGGACAGCCAAAG
CTGAGCGACGTCATCAGGAGCGGCTGCGTATGCAGAGCCCTGAGCTGCCCGCCCCAGAGCGGGC
CCTGTCTCCTGCAGAGCGAAGGGCTCTAGAGGCCGAGAAGCGAGCACTGTGGAGAGCAGCCAGA
ATGAAGTCTCTGGAGCAGGATGCCCTCCGTGCACAGATGGTCCTCAGCAAGTCCCAGGAAGGCC
GTGGCAAGAGAGGACCCTTGGAGCGGCTGGCTGAGGCCCCTTCACCTGCACCCACACCATCACC
TACACCATTAGAAGACTTTGGCCTCCAGACCAGTACCTCCCCTGGACGCTTGCCTTTGTCTGGA
AAGAAGTTTGACTACAGGGCCTTCGCAGCCCTGCCTTCTTCCAGGCCTGTGTATGACATCCAGG
TACTGGGGGCCACTTGGCCCATCTGCACGCTCCTACCTCCCCATCCTTGCCTGTCACCTGCCTT
CCTCCACTCCTTTCTGTGTGCTTCCTACTCTGTTTCCTGTGTGTGGAGCCTTCCTACACACCTT
GGTGTCAGCCCAGTGTGCTCTGACCATGACCTAGGCTCTGTGGGCCTAGCCCCAGACAGCCACG
CCTGCATGGGTAAGTTCAGGCAGGTCTGGGACTTGCCCTGACCAGCCTGTCTCCC

hide sequence

RefSeq Acc Id:

XM_039079543 ⟹ XP_038935471

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	7	109,640,034 - 109,663,354 (-)	NCBI
mRatBN7.2	7	107,759,343 - 107,782,361 (-)	NCBI

RefSeq Acc Id:

XM_039079544 ⟹ XP_038935472

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	7	109,640,034 - 109,663,354 (-)	NCBI
mRatBN7.2	7	107,759,343 - 107,782,361 (-)	NCBI

RefSeq Acc Id:

XM_039079545 ⟹ XP_038935473

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	7	109,640,034 - 109,663,354 (-)	NCBI
mRatBN7.2	7	107,759,343 - 107,782,361 (-)	NCBI

RefSeq Acc Id:

XM_063263870 ⟹ XP_063119940

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	7	109,640,034 - 109,663,354 (-)	NCBI

RefSeq Acc Id:

XM_063263871 ⟹ XP_063119941

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	7	109,640,034 - 109,663,354 (-)	NCBI

RefSeq Acc Id:

XM_063263872 ⟹ XP_063119942

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	7	109,640,034 - 109,663,354 (-)	NCBI

RefSeq Acc Id:

XM_063263873 ⟹ XP_063119943

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	7	109,640,034 - 109,663,354 (-)	NCBI

RefSeq Acc Id:

XR_005486672

Type:

NON-CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	7	109,644,690 - 109,663,354 (-)	NCBI
mRatBN7.2	7	107,764,000 - 107,782,364 (-)	NCBI

RefSeq Acc Id:

XR_010053008

Type:

NON-CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	7	109,641,937 - 109,663,354 (-)	NCBI

Protein Sequences


Protein RefSeqs	NP_001178808	(Get FASTA)	NCBI Sequence Viewer
	XP_006241880	(Get FASTA)	NCBI Sequence Viewer
	XP_006241881	(Get FASTA)	NCBI Sequence Viewer
	XP_008763800	(Get FASTA)	NCBI Sequence Viewer
	XP_017450457	(Get FASTA)	NCBI Sequence Viewer
	XP_038935471	(Get FASTA)	NCBI Sequence Viewer
	XP_038935472	(Get FASTA)	NCBI Sequence Viewer
	XP_038935473	(Get FASTA)	NCBI Sequence Viewer
	XP_063119940	(Get FASTA)	NCBI Sequence Viewer
	XP_063119941	(Get FASTA)	NCBI Sequence Viewer
	XP_063119942	(Get FASTA)	NCBI Sequence Viewer
	XP_063119943	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	EDM16017	(Get FASTA)	NCBI Sequence Viewer
	EDM16018	(Get FASTA)	NCBI Sequence Viewer
	EDM16019	(Get FASTA)	NCBI Sequence Viewer
	EDM16020	(Get FASTA)	NCBI Sequence Viewer
	EDM16021	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000044022.4
	ENSRNOP00000090189.1
	ENSRNOP00000095517.1
	ENSRNOP00000095752.1

RefSeq Acc Id:

NP_001178808 ⟸ NM_001191879

- UniProtKB:

A6HS53 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MLKCIPLWRCNRHVESVDKRHCSLQVVPEEIYRYSRSLEELLLDANQLRELPKPFFRLLNLRKL
GLSDNEIQRLPPEVANFMQLVELDVSRNDIPEIPESIKFCKALEIADFSGNPLSRLPDGFTQLR
SLAHLALNDVSLQALPGDVGNLANLVTLELRENLLKSLPASLSFLVKLEQLDLGGNDLEVLPDT
LGALPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENRLEELPVELGGLALLTDLLLSQNLLQ
RLPEGIGQLKQLSILKVDQNRLCEVTEAIGDCENLSELILTENLLTALPRSLGKLTKLTNLNVD
RNHLEVLPPEIGGCVALSVLSLRDNRLAVLPPELAHTAELHVLDVAGNRLRSLPFALTHLNLKA
LWLAENQAQPMLRFQTEDDAQTGEKVLTCYLLPQQPLPSLEDPGQQSSPSESCSDAPLSRVSVI
QFEDPLEGEEDAEEAAAEKRGLQRRATPHPSELKVMKRGIEERRNEAFVCKPDPSPPSPSEEER
RLSAESALSGNSVPSASTASDGEPETLPAEVQGLGQQEAMPGQEEYPEEDYNEPTVHFAEDTLI
PREDGEGEEGQPEAPWPLPSGRQRLIRKDTPHYKKHFKISKLPQPEAVVALLQGVQTDREGPTA
GWHNGPHTPWAPRAHEEEEEEENRDEEEGEASMEEDDKEEAVASAPSVKGVSFDQANNLLIEPA
RIEEEELTLTIVRQTGGLGISIAGGKGSTPYKGDDEGIFISRVSEEGPAAHAGVRVGDKLLEVN
GVALQDAEHHEAVEALRGAGAAVQMRVWRERMVEPENAVTITPLRPEDDYSPREWRGGGLRLPL
LQPETPVPLRQRHAACLVRSEKGLGFSIAGGKGSTPYRAGDAGIFISRIAEGGAAHRAGTLQVG
DRVLSINGVDMTEARHDHAVSLLTAASTTISLLLERETGGAYPPSPPPHSSSTPTATVAATMTT
AIPGEPLLPRLSPSLLATALEGPYPVEEICLPRAGGPLGLSIVGGSDHSSHPFGVQDPGVFISK
VLPRGLAARCGLRVGDRILAVNGQDVREATHQEAVSALLRPCLELCLLVRRDPPPPGMRELCIQ
KAPGEKLGISIRGGAKGHAGNPCDPTDEGIFISKVSPTGAAGRDGRLRVGLRLLEVNQQSLLGL
THAEAVQLLRSVGDTLTVLVCDGFDTSTTTALEVSPGVIANPFAAGLGHRNSLESISSIDRELS
PEGPGKEKELASQTLPWEPESAETTGRNQEPLKLDYRVLAAVPSAGSLQRGPCATTGGKMTEAP
SSPGSQQTKPGVIQPLAQAWPRDSPAPRGRDGPCSPPSPDELPANVKQAYRAFAAVPTVHPPEN
SATQPPTPGPAASPEQLSFRERQKYFELEVRVPQAEGPPKRVSLVGADDLRKMQEEEARKLQQK
RAQMLREEAVTSGPDTGLASDRESLDDEQEAEQPWAGPSHAGGLSPSSPTPLGGSAPVRTAKAE
RRHQERLRMQSPELPAPERALSPAERRALEAEKRALWRAARMKSLEQDALRAQMVLSKSQEGRG
KRGPLERLAEAPSPAPTPSPTPLEDFGLQTSTSPGRLPLSGKKFDYRAFAALPSSRPVYDIQSP
DFVEELRTLDPSPSPGPQEEDGEVALVLLGRPSPGTVGPEDMTLCSSRRAMRPGRRGLGPVPS

hide sequence

RefSeq Acc Id:	XP_006241881 ⟸ XM_006241819
- Peptide Label:	isoform X8
- UniProtKB:	A0A8I6APB3 (UniProtKB/TrEMBL)
- Sequence:	show sequence MLKCIPLWRCNRHVESVDKRHCSLQVVPEEIYRYSRSLEELLLDANQLRELPKPFFRLLNLRKL GLSDNEIQRLPPEVANFMQLVELDVSRNDIPEIPESIKFCKALEIADFSGNPLSRLPDGFTQLR SLAHLALNDVSLQALPGDVGNLANLVTLELRENLLKSLPASLSFLVKLEQLDLGGNDLEVLPDT LGALPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENRLEELPVELGGLALLTDLLLSQNLLQ RLPEGIGQLKQLSILKVDQNRLCEVTEAIGDCENLSELILTENLLTALPRSLGKLTKLTNLNVD RNHLEVLPPEIGGCVALSVLSLRDNRLAVLPPELAHTAELHVLDVAGNRLRSLPFALTHLNLKA LWLAENQAQPMLRFQTEDDAQTGEKVLTCYLLPQQPLPSLEDPGQQSSPSESCSDAPLSRVSVI QFEDPLEGEEDAEEAAAEKRGLQRRATPHPSELKVMKRGIEERRNEAFVCKPDPSPPSPSEEER RLSAESALSGNSVPSASTASDGEPETLPAEVQGLGQQEAMPGQEEYPEEDYNEPTVHFAEDTLI PREDGEGEEGQPEAPWPLPSGRQRLIRKDTPHYKKHFKISKLPQPEAVVALLQGVQTDREGPTA GWHNGPHTPWAPRAHEEEEEEENRDEEEGEASMEEDDKEEAVASAPSVKGVSFDQANNLLIEPA RIEEEELTLTIVRQTGGLGISIAGGKGSTPYKGDDEGIFISRVSEEGPAAHAGVRVGDKLLEVN GVALQDAEHHEAVEALRGAGAAVQMRVWRERMVEPENAVTITPLRPEDDYSPREWRGGGLRLPL LQPETPVPLRQRHAACLVRSEKGLGFSIAGGKGSTPYRAGDAGIFISRIAEGGAAHRAGTLQVG DRVLSINGVDMTEARHDHAVSLLTAASTTISLLLERETGGAYPPSPPPHSSSTPTATVAATMTT AIPGEPLLPRLSPSLLATALEGPYPVEEICLPRAGGPLGLSIVGGSDHSSHPFGVQDPGVFISK VLPRGLAARCGLRVGDRILAVNGQDVREATHQEAVSALLRPCLELCLLVRRDPPPPGMRELCIQ KAPGEKLGISIRGGAKGHAGNPCDPTDEGIFISKVSPTGAAGRDGRLRVGLRLLEVNQQSLLGL THAEAVQLLRSVGDTLTVLVCDGFDTSTTTALEVSPGVIANPFAAGLGHRNSLESISSIDRELS PEGPGKEKELASQTLPWEPESAETTGRNQEPLKLDYRVLAAVPSAGSLQRGPCATTGGKMTEAP SSPGSQQPPSPDELPANVKQAYRAFAAVPTVHPPENSATQPPTPGPAASPEQLSFRERQKYFEL EVRVPQAEGPPKRVSLVGADDLRKMQEEEARKLQQKRAQMLREEAVTSGPDTGLASDRESLDDE QEAEQPWAGPSHAGGLSPSSPTPLGGSAPVRTAKAERRHQERLRMQSPELPAPERALSPAERRA LEAEKRALWRAARMKSLEQDALRAQMVLSKSQEGRGKRGPLERLAEAPSPAPTPSPTPLEDFGL QTSTSPGRLSPDFVEELRTLDPSPSPGPQEEDGEVALVLLGRPSPGTVGPEDMTLCSSRRAMRP GRRGLGPVPS hide sequence

RefSeq Acc Id:	XP_006241880 ⟸ XM_006241818
- Peptide Label:	isoform X4
- UniProtKB:	D3ZWS0 (UniProtKB/TrEMBL), A6HS52 (UniProtKB/TrEMBL)
- Sequence:	show sequence MLKCIPLWRCNRHVESVDKRHCSLQVVPEEIYRYSRSLEELLLDANQLRELPKPFFRLLNLRKL GLSDNEIQRLPPEVANFMQLVELDVSRNDIPEIPESIKFCKALEIADFSGNPLSRLPDGFTQLR SLAHLALNDVSLQALPGDVGNLANLVTLELRENLLKSLPASLSFLVKLEQLDLGGNDLEVLPDT LGALPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENRLEELPVELGGLALLTDLLLSQNLLQ RLPEGIGQLKQLSILKVDQNRLCEVTEAIGDCENLSELILTENLLTALPRSLGKLTKLTNLNVD RNHLEVLPPEIGGCVALSVLSLRDNRLAVLPPELAHTAELHVLDVAGNRLRSLPFALTHLNLKA LWLAENQAQPMLRFQTEDDAQTGEKVLTCYLLPQQPLPSLEDPGQQSSPSESCSDAPLSRVSVI QFEDPLEGEEDAEEAAAEKRGLQRRATPHPSELKVMKRGIEERRNEAFVCKPDPSPPSPSEEER RLSAESALSGNSVPSASTASDGEPETLPAEVQGLGQQEAMPGQEEYPEEDYNEPTVHFAEDTLI PREDGEGEEGQPEAPWPLPSGRQRLIRKDTPHYKKHFKISKLPQPEAVVALLQGVQTDREGPTA GWHNGPHTPWAPRAHEEEEEEENRDEEEGEASMEEDDKEEAVASAPSVKGVSFDQANNLLIEPA RIEEEELTLTIVRQTGGLGISIAGGKGSTPYKGDDEGIFISRVSEEGPAAHAGVRVGDKLLEVN GVALQDAEHHEAVEALRGAGAAVQMRVWRERMVEPENAVTITPLRPEDDYSPREWRGGGLRLPL LQPETPVPLRQRHAACLVRSEKGLGFSIAGGKGSTPYRAGDAGIFISRIAEGGAAHRAGTLQVG DRVLSINGVDMTEARHDHAVSLLTAASTTISLLLERETGGAYPPSPPPHSSSTPTATVAATMTT AIPGEPLLPRLSPSLLATALEGPYPVEEICLPRAGGPLGLSIVGGSDHSSHPFGVQDPGVFISK VLPRGLAARCGLRVGDRILAVNGQDVREATHQEAVSALLRPCLELCLLVRRDPPPPGMRELCIQ KAPGEKLGISIRGGAKGHAGNPCDPTDEGIFISKVSPTGAAGRDGRLRVGLRLLEVNQQSLLGL THAEAVQLLRSVGDTLTVLVCDGFDTSTTTALEVSPGVIANPFAAGLGHRNSLESISSIDRELS PEGPGKEKELASQTLPWEPESAETTGRNQEPLKLDYRVLAAVPSAGSLQRGPCATTGGKMTEAP SSPGSQQTKPGVIQPLAQAWPRDSPAPRGRDGPCSPPSPDELPANVKQAYRAFAAVPTVHPPEN SATQPPTPGPAASPEQLSFRERQKYFELEVRVPQAEGPPKRVSLVGADDLRKMQEEEARKLQQK RAQMLREEAVTSGPDTGLASDRESLDDEQEAEQPWAGPSHAGGLSPSSPTPLGGSAPVRTAKAE RRHQERLRMQSPELPAPERALSPAERRALEAEKRALWRAARMKSLEQDALRAQMVLSKSQEGRG KRGPLERLAEAPSPAPTPSPTPLEDFGLQTSTSPGRLSPDFVEELRTLDPSPSPGPQEEDGEVA LVLLGRPSPGTVGPEDMTLCSSRRAMRPGRRGLGPVPS hide sequence

RefSeq Acc Id:	XP_008763800 ⟸ XM_008765578
- Peptide Label:	isoform X5
- UniProtKB:	A6HS51 (UniProtKB/TrEMBL)
- Sequence:	show sequence MLKCIPLWRCNRHVESVDKRHCSLQVVPEEIYRYSRSLEELLLDANQLRELPKPFFRLLNLRKL GLSDNEIQRLPPEVANFMQLVELDVSRNDIPEIPESIKFCKALEIADFSGNPLSRLPDGFTQLR SLAHLALNDVSLQALPGDVGNLANLVTLELRENLLKSLPASLSFLVKLEQLDLGGNDLEVLPDT LGALPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENRLEELPVELGGLALLTDLLLSQNLLQ RLPEGIGQLKQLSILKVDQNRLCEVTEAIGDCENLSELILTENLLTALPRSLGKLTKLTNLNVD RNHLEVLPPEIGGCVALSVLSLRDNRLAVLPPELAHTAELHVLDVAGNRLRSLPFALTHLNLKA LWLAENQAQPMLRFQTEDDAQTGEKVLTCYLLPQQPLPSLEDPGQQSSPSESCSDAPLSRVSVI QFEDPLEGEEDAEEAAAEKRGLQRRATPHPSELKVMKRGIEERRNEAFVCKPDPSPPSPSEEER RLSAESALSGNSVPSASTASDGEPETLPAEVQGLGQQEAMPGQEEYPEEDYNEPTVHFAEDTLI PREDGEGEEGQPEAPWPLPSGRQRLIRKDTPHYKKHFKISKLPQPEAVVALLQGVQTDREGPTA GWHNGPHTPWAPRAHEEEEEEENRDEEEGEASMEEDDKEEAVASAPSVKGVSFDQANNLLIEPA RIEEEELTLTIVRQTGGLGISIAGGKGSTPYKGDDEGIFISRVSEEGPAAHAGVRVGDKLLEVN GVALQDAEHHEAVEALRGAGAAVQMRVWRERMVEPENAVTITPLRPEDDYSPREWRGGGLRLPL LQPETPVPLRQRHAACLVRSEKGLGFSIAGGKGSTPYRAGDAGIFISRIAEGGAAHRAGTLQVG DRVLSINGVDMTEARHDHAVSLLTAASTTISLLLERETGGAYPPSPPPHSSSTPTATVAATMTT AIPGEPLLPRLSPSLLATALEGPYPVEEICLPRAGGPLGLSIVGGSDHSSHPFGVQDPGVFISK VLPRGLAARCGLRVGDRILAVNGQDVREATHQEAVSALLRPCLELCLLVRRDPPPPGMRELCIQ KAPGEKLGISIRGGAKGHAGNPCDPTDEGIFISKVSPTGAAGRDGRLRVGLRLLEVNQQSLLGL THAEAVQLLRSVGDTLTVLVCDGFDTSTTTALEVSPGVIANPFAAGLGHRNSLESISSIDRELS PEGPGKEKELASQTLPWEPESAETTGRNQEPLKLDYRVLAAVPSAGSLQRGPCATTGGKMTEAP SSPGSQQPPSPDELPANVKQAYRAFAAVPTVHPPENSATQPPTPGPAASPEQLSFRERQKYFEL EVRVPQAEGPPKRVSLVGADDLRKMQEEEARKLQQKRAQMLREEAVTSGPDTGLASDRESLDDE QEAEQPWAGPSHAGGLSPSSPTPLGGSAPVRTAKAERRHQERLRMQSPELPAPERALSPAERRA LEAEKRALWRAARMKSLEQDALRAQMVLSKSQEGRGKRGPLERLAEAPSPAPTPSPTPLEDFGL QTSTSPGRLPLSGKKFDYRAFAALPSSRPVYDIQSPDFVEELRTLDPSPSPGPQEEDGEVALVL LGRPSPGTVGPEDMTLCSSRRAMRPGRRGLGPVPS hide sequence

RefSeq Acc Id:

XP_017450457 ⟸ XM_017594968

- Peptide Label:

isoform X1

- Sequence:

show sequence

MLKCIPLWRCNRHVESVDKRHCSLQVVPEEIYRYSRSLEELLLDANQLRELPKPFFRLLNLRKL
GLSDNEIQRLPPEVANFMQLVELDVSRNDIPEIPESIKFCKALEIADFSGNPLSRLPDGFTQLR
SLAHLALNDVSLQALPGDVGNLANLVTLELRENLLKSLPASLSFLVKLEQLDLGGNDLEVLPDT
LGALPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENRLEELPVELGGLALLTDLLLSQNLLQ
RLPEGIGQLKQLSILKVDQNRLCEVTEAIGDCENLSELILTENLLTALPRSLGKLTKLTNLNVD
RNHLEVLPPEIGGCVALSVLSLRDNRLAVLPPELAHTAELHVLDVAGNRLRSLPFALTHLNLKA
LWLAENQAQPMLRFQTEDDAQTGEKVLTCYLLPQQPLPSLDPGQQSSPSESCSDAPLSRVSVIQ
FEDPLEGEEDAEEAAAEKRGLQRRATPHPSELKVMKRGIEERRNEAFVCKPDPSPPSPSEEERR
LSAESALSGNSVPSASTASDGEPETLPAEVQGLGQQEAMPGQEEYPEEDYNEPTVHFAEDTLIP
REDGEGEEGQPEAPWPLPSGRQRLIRKDTPHYKKHFKISKLPQPEAVVALLQGVQTDREGPTAG
WHNGPHTPWAPRAHEEEEEEENRDEEEGEASMEEDDKEEAVASAPSVKGVSFDQANNLLIEPAR
IEEEELTLTIVRQTGGLGISIAGGKGSTPYKGDDEGIFISRVSEEGPAAHAGVRVGDKLLEVNG
VALQDAEHHEAVEALRGAGAAVQMRVWRERMVEPENAVTITPLRPEDDYSPREWRGGGLRLPLL
QPETPVPLRQRHAACLVRSEKGLGFSIAGGKGSTPYRAGDAGIFISRIAEGGAAHRAGTLQVGD
RVLSINGVDMTEARHDHAVSLLTAASTTISLLLERETGGAYPPSPPPHSSSTPTATVAATMTTA
IPGEPLLPRLSPSLLATALEGPYPVEEICLPRAGGPLGLSIVGGSDHSSHPFGVQDPGVFISKV
LPRGLAARCGLRVGDRILAVNGQDVREATHQEAVSALLRPCLELCLLVRRDPPPPGMRELCIQK
APGEKLGISIRGGAKGHAGNPCDPTDEGIFISKVSPTGAAGRDGRLRVGLRLLEVNQQSLLGLT
HAEAVQLLRSVGDTLTVLVCDGFDTSTTTALEVSPGVIANPFAAGLGHRNSLESISSIDRELSP
EGPGKEKELASQTLPWEPESAETTGRNQEPLKLDYRVLAAVPSAGSLQRGPCATTGGKMTEAPS
SPGSQQTKPGVIQPLAQAWPRDSPAPRGRDGPCSPPSPDELPANVKQAYRAFAAVPTVHPPENS
ATQPPTPGPAASPEQLSFRERQKYFELEVRVPQAEGPPKRVSLVGADDLRKMQEEEARKLQQKR
AQMLREEAVTSGPDTGLASDRESLDDEQEAEQPWAGPSHAGGLSPSSPTPLGGSAPVRTAKAER
RHQERLRMQSPELPAPERALSPAERRALEAEKRALWRAARMKSLEQDALRAQMVLSKSQEGRGK
RGPLERLAEAPSPAPTPSPTPLEDFGLQTSTSPGRLPLSGKKFDYRAFAALPSSRPVYDIQVLG
ATWPICTLLPPHPCLSPAFLHSFLCASYSVSCVWSLPTHLGVSPVCSDHDLGSVGLAPDSHACM
GKFRQVWDLP

hide sequence

Ensembl Acc Id:

ENSRNOP00000044022 ⟸ ENSRNOT00000045280

RefSeq Acc Id:	XP_038935471 ⟸ XM_039079543
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_038935473 ⟸ XM_039079545
- Peptide Label:	isoform X7

RefSeq Acc Id:	XP_038935472 ⟸ XM_039079544
- Peptide Label:	isoform X3

Ensembl Acc Id:

ENSRNOP00000090189 ⟸ ENSRNOT00000101717

Ensembl Acc Id:

ENSRNOP00000095517 ⟸ ENSRNOT00000102170

Ensembl Acc Id:

ENSRNOP00000095752 ⟸ ENSRNOT00000097559

RefSeq Acc Id:	XP_063119943 ⟸ XM_063263873
- Peptide Label:	isoform X11

RefSeq Acc Id:	XP_063119942 ⟸ XM_063263872
- Peptide Label:	isoform X10
- UniProtKB:	A0A8I6ANK4 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063119941 ⟸ XM_063263871
- Peptide Label:	isoform X9
- UniProtKB:	A0A8I6ABB5 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063119940 ⟸ XM_063263870
- Peptide Label:	isoform X6

Protein Domains

PDZ

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-D3ZWS0-F1-model_v2	AlphaFold	D3ZWS0	1-1663	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Promoters

RGD ID:

13695401

Promoter ID:

EPDNEW_R5924

Type:

initiation region

Name:

Scrib_1

Description:

scribbled planar cell polarity protein

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0	7	117,128,817 - 117,128,877	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1565055	AgrOrtholog
BioCyc Gene	G2FUF-32962	BioCyc
Ensembl Genes	ENSRNOG00000032574	Ensembl, UniProtKB/TrEMBL
Ensembl Transcript	ENSRNOT00000045280.5	UniProtKB/TrEMBL
	ENSRNOT00000097559.1	UniProtKB/TrEMBL
	ENSRNOT00000101717.1	UniProtKB/TrEMBL
	ENSRNOT00000102170.1	UniProtKB/TrEMBL
Gene3D-CATH	2.30.42.10	UniProtKB/TrEMBL
	3.80.10.10	UniProtKB/TrEMBL
InterPro	L_dom-like	UniProtKB/TrEMBL
	Leu-rich_rpt	UniProtKB/TrEMBL
	Leu-rich_rpt_typical-subtyp	UniProtKB/TrEMBL
	PDZ/DHR/GLGF	UniProtKB/TrEMBL
	PDZ_sf	UniProtKB/TrEMBL
	Synaptic_Scaffolding_LAP-MAGUK	UniProtKB/TrEMBL
KEGG Report	rno:362938	UniProtKB/TrEMBL
NCBI Gene	362938	ENTREZGENE
PANTHER	DISCS LARGE	UniProtKB/TrEMBL
	PROTEIN SCRIBBLE HOMOLOG	UniProtKB/TrEMBL
Pfam	LRR_8	UniProtKB/TrEMBL
	PDZ	UniProtKB/TrEMBL
PhenoGen	Scrib	PhenoGen
PROSITE	LRR	UniProtKB/TrEMBL
	PDZ	UniProtKB/TrEMBL
RatGTEx	ENSRNOG00000032574	RatGTEx
SMART	LRR_BAC	UniProtKB/TrEMBL
	LRR_TYP	UniProtKB/TrEMBL
	PDZ	UniProtKB/TrEMBL
Superfamily-SCOP	L domain-like	UniProtKB/TrEMBL
	PDZ	UniProtKB/TrEMBL
UniProt	A0A8I6ABB5	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I6ANK4	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I6APB3	ENTREZGENE, UniProtKB/TrEMBL
	A6HS51	ENTREZGENE, UniProtKB/TrEMBL
	A6HS52	ENTREZGENE, UniProtKB/TrEMBL
	A6HS53	ENTREZGENE, UniProtKB/TrEMBL
	D3ZWS0	ENTREZGENE, UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2019-04-02	Scrib	scribble planar cell polarity protein	Scrib	scribbled planar cell polarity protein	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2013-03-20	Scrib	scribbled planar cell polarity protein	Scrib	scribbled homolog (Drosophila)	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2009-06-15	Scrib	scribbled homolog (Drosophila)	Scrib_predicted	scribbled homolog (Drosophila) (predicted)	Data merged from RGD:1310522	1643240	APPROVED
2008-03-06	Scrib	scribbled homolog (Drosophila)	RGD1565055_predicted	similar to PDZ-domain protein scribble (predicted)	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2006-03-07	RGD1565055_predicted	similar to PDZ-domain protein scribble (predicted)	LOC362938	similar to PDZ-domain protein scribble	Symbol and Name status set to approved	1299863	APPROVED
2006-02-09	LOC362938	similar to PDZ-domain protein scribble			Symbol and Name status set to provisional	70820	PROVISIONAL
2005-01-12	Scrib_predicted	scribbled homolog (Drosophila) (predicted)			Symbol and Name status set to approved	70820	APPROVED

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Imported Disease Annotations - ClinVar

RGD Manual Annotations

Send us a Message

Imported Disease Annotations - ClinVar

RGD Manual Annotations