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Gene: Camsap1 (calmodulin regulated spectrin-associated protein 1) Rattus norvegicus

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Symbol:

Camsap1

Name:

calmodulin regulated spectrin-associated protein 1

RGD ID:

1565022

Description:

Enables calmodulin binding activity and spectrin binding activity. Involved in neuron projection development. Predicted to be located in microtubule. Predicted to colocalize with microtubule minus-end. Human ortholog(s) of this gene implicated in complex cortical dysplasia with other brain malformations. Orthologous to human CAMSAP1 (calmodulin regulated spectrin associated protein 1); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; allethrin; bisphenol A.

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

calmodulin-regulated spectrin-associated protein 1; LOC296580; RGD1565022; similar to calmodulin regulated spectrin-associated protein 1

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

mRatBN7.2 - mRatBN7.2 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	3	29,144,318 - 29,206,382 (-)	NCBI		GRCr8
mRatBN7.2	3	8,746,176 - 8,806,067 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	3	8,746,176 - 8,806,072 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	3	11,800,468 - 11,860,341 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	3	20,383,682 - 20,443,558 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	3	18,638,999 - 18,698,877 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	3	3,373,971 - 3,434,027 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	3	3,373,971 - 3,434,027 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	3	8,736,053 - 8,796,109 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	3	4,098,538 - 4,159,591 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
Celera	3	3,569,327 - 3,629,181 (-)	NCBI		Celera
Cytogenetic Map	3	p13	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

Adams-Oliver Syndrome 5 (ISO)

autosomal dominant intellectual developmental disorder 8 (ISO)

autosomal dominant nocturnal frontal lobe epilepsy 5 (ISO)

Complex Cortical Dysplasia with Other Brain Malformations 12 (ISO)

developmental and epileptic encephalopathy 14 (ISO)

Ehlers-Danlos syndrome classic type 1 (ISO)

genetic disease (ISO)

Joubert syndrome 1 (ISO)

juvenile rheumatoid arthritis (ISO)

Kleefstra syndrome 1 (ISO)

Leigh disease (ISO)

primary coenzyme Q10 deficiency 7 (ISO)

Rafiq syndrome (ISO)

tuberous sclerosis 1 (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

1,2-dimethylhydrazine (ISO)

17beta-estradiol (ISO)

2,3',4,4',5-Pentachlorobiphenyl (ISO)

2,3,7,8-tetrachlorodibenzodioxine (EXP)

2-methylcholine (ISO)

3,4-methylenedioxymethamphetamine (ISO)

3-isobutyl-1-methyl-7H-xanthine (ISO)

acrolein (ISO)

aflatoxin B1 (ISO)

allethrin (EXP)

alpha-pinene (ISO)

antirheumatic drug (ISO)

arsane (ISO)

arsenic atom (ISO)

arsenite(3-) (ISO)

atrazine (ISO)

benzo[a]pyrene (ISO)

benzo[a]pyrene diol epoxide I (ISO)

bisphenol A (EXP)

bisphenol F (ISO)

butanal (ISO)

caffeine (ISO)

carbon nanotube (ISO)

choline (ISO)

cobalt dichloride (ISO)

copper atom (EXP)

copper(0) (EXP)

coumarin (ISO)

crocidolite asbestos (ISO)

cyclosporin A (ISO)

cyhalothrin (EXP)

cypermethrin (EXP)

dexamethasone (ISO)

dicrotophos (ISO)

dorsomorphin (ISO)

ethanol (ISO)

fenvalerate (EXP)

folic acid (ISO)

FR900359 (ISO)

fulvestrant (ISO)

gentamycin (EXP)

indometacin (ISO)

L-methionine (ISO)

lead(0) (ISO)

methylmercury chloride (ISO)

N,N,N',N'-tetrakis(2-pyridylmethyl)ethylenediamine (ISO)

ozone (ISO)

paracetamol (ISO)

pentachlorophenol (ISO)

pyrethrins (EXP)

SB 431542 (ISO)

sunitinib (ISO)

tetrachloromethane (EXP)

thioacetamide (EXP)

titanium dioxide (ISO)

triphenyl phosphate (ISO)

valproic acid (ISO)

zoledronic acid (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

cytoplasmic microtubule organization (IBA)

cytoskeleton organization (ISO)

microtubule cytoskeleton organization (ISO,ISS)

negative regulation of microtubule depolymerization (IBA)

neuron projection development (IEA,IMP,ISO)

regulation of cell morphogenesis (ISO)

regulation of microtubule polymerization (ISO,ISS)

Cellular Component

cytoplasm (IEA)

microtubule (IEA,ISO,ISS)

microtubule minus-end (IBA,ISO,ISS)

Molecular Function

calmodulin binding (IDA,IEA)

microtubule binding (IEA,ISO,ISS)

microtubule minus-end binding (IBA,ISO,ISS)

protein binding (ISO)

spectrin binding (IDA,IEA,ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	The CKK domain (DUF1781) binds microtubules and defines the CAMSAP/ssp4 family of animal proteins.	Baines AJ, etal., Mol Biol Evol. 2009 Sep;26(9):2005-14. doi: 10.1093/molbev/msp115. Epub 2009 Jun 9.
2.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
3.	A conserved sequence in calmodulin regulated spectrin-associated protein 1 links its interaction with spectrin and calmodulin to neurite outgrowth.	King MD, etal., J Neurochem. 2014 Feb;128(3):391-402. doi: 10.1111/jnc.12462. Epub 2013 Oct 24.
4.	ClinVar Automated Import and Annotation Pipeline	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
5.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

Additional References at PubMed

PMID:21834987	PMID:24486153	PMID:24706919	PMID:38825498

Genomics

Comparative Map Data

Camsap1
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	3	29,144,318 - 29,206,382 (-)	NCBI		GRCr8
mRatBN7.2	3	8,746,176 - 8,806,067 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	3	8,746,176 - 8,806,072 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	3	11,800,468 - 11,860,341 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	3	20,383,682 - 20,443,558 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	3	18,638,999 - 18,698,877 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	3	3,373,971 - 3,434,027 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	3	3,373,971 - 3,434,027 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	3	8,736,053 - 8,796,109 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	3	4,098,538 - 4,159,591 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
Celera	3	3,569,327 - 3,629,181 (-)	NCBI		Celera
Cytogenetic Map	3	p13	NCBI

CAMSAP1
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	9	135,808,487 - 135,907,546 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	9	135,808,487 - 135,907,546 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	9	138,700,333 - 138,799,392 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	9	137,841,248 - 137,914,570 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Celera	9	109,218,269 - 109,316,951 (-)	NCBI		Celera
Cytogenetic Map	9	q34.3	NCBI
HuRef	9	108,162,072 - 108,261,017 (-)	NCBI		HuRef
CHM1_1	9	138,848,836 - 138,947,490 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	9	148,035,587 - 148,134,968 (-)	NCBI		T2T-CHM13v2.0

Camsap1
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	2	25,816,850 - 25,873,574 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	2	25,816,850 - 25,873,294 (-)	Ensembl		GRCm39 Ensembl
GRCm38	2	25,926,838 - 25,983,562 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	2	25,926,838 - 25,983,282 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	2	25,782,358 - 25,838,802 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	2	25,748,973 - 25,806,035 (-)	NCBI		MGSCv36	mm8
Celera	2	25,649,057 - 25,705,208 (-)	NCBI		Celera
Cytogenetic Map	2	A3	NCBI
cM Map	2	18.29	NCBI

Camsap1
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955513	4,667,292 - 4,705,910 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955513	4,649,816 - 4,704,282 (+)	NCBI	ChiLan1.0	ChiLan1.0

CAMSAP1
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	11	3,480,114 - 3,577,135 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	9	3,482,325 - 3,580,555 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	9	106,881,023 - 106,979,501 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	9	135,866,980 - 135,939,757 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	9	135,866,980 - 135,944,911 (-)	Ensembl	panpan1.1		panPan2

CAMSAP1
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	9	49,458,701 - 49,523,056 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	9	49,458,694 - 49,521,332 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	9	48,711,241 - 48,775,615 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	9	50,337,967 - 50,402,417 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	9	50,337,511 - 50,401,534 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	9	49,118,155 - 49,182,479 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	9	49,412,259 - 49,476,607 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	9	49,460,426 - 49,524,786 (+)	NCBI		UU_Cfam_GSD_1.0

Camsap1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404947	201,543,182 - 201,604,114 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936669	1,770,870 - 1,831,930 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936669	1,785,229 - 1,831,876 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

CAMSAP1
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa10.2	1	308,851,713 - 308,883,589 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

CAMSAP1
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	12	2,298,341 - 2,395,392 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	12	2,298,666 - 2,396,503 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666058	2,769,476 - 2,907,318 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Camsap1
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624760	1,179,756 - 1,267,285 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624760	1,220,036 - 1,267,345 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in Camsap1
166 total Variants

miRNA Target Status

Predicted Target Of

	Summary Value
Count of predictions:	639
Count of miRNA genes:	281
Interacting mature miRNAs:	357
Transcripts:	ENSRNOT00000024163
Prediction methods:	Microtar, Miranda, Rnahybrid
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (mRatBN7.2)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
1358357	Srcrtb1	Stress Responsive Cort Basal QTL 1	6.36	0.002	blood corticosterone amount (VT:0005345)	plasma corticosterone level (CMO:0001173)	3	8658162	27494778	Rat
4889966	Bss95	Bone structure and strength QTL 95	4.4		tibia area (VT:1000281)	tibia-fibula cross-sectional area (CMO:0001718)	3	1	36847613	Rat
2292615	Ept17	Estrogen-induced pituitary tumorigenesis QTL 17	6.7		pituitary gland mass (VT:0010496)	pituitary gland wet weight (CMO:0000853)	3	6537645	10778823	Rat
10401810	Kidm53	Kidney mass QTL 53			kidney mass (VT:0002707)	both kidneys wet weight to body weight ratio (CMO:0000340)	3	8227194	47233430	Rat
1298526	Arunc3	Aerobic running capacity QTL 3	2.2		exercise endurance trait (VT:0002332)	maximum distance run on treadmill (CMO:0001406)	3	8227194	33703538	Rat
631545	Bp85	Blood pressure QTL 85	3.1		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	3	1	33278763	Rat
631679	Cm10	Cardiac mass QTL 10	7.34	0.0001	heart left ventricle mass (VT:0007031)	heart left ventricle weight to body weight ratio (CMO:0000530)	3	1	31158234	Rat
2290452	Scl56	Serum cholesterol level QTL 56	2.26		blood cholesterol amount (VT:0000180)	plasma total cholesterol level (CMO:0000585)	3	1	91609953	Rat
631568	Bp92	Blood pressure QTL 92	2.2	0.005	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	3	1	39874793	Rat
70203	Gcr2	Gastric cancer resistance QTL 2	2.6		stomach morphology trait (VT:0000470)	stomach tumor susceptibility score (CMO:0002043)	3	8658162	27494778	Rat
70202	Alc19	Alcohol consumption QTL 19	2.5		drinking behavior trait (VT:0001422)	ethanol intake volume to total fluid intake volume ratio (CMO:0001591)	3	1	27494778	Rat
2312664	Scl62	Serum cholesterol level QTL 62		0.05	blood cholesterol amount (VT:0000180)	serum total cholesterol level (CMO:0000363)	3	1	38710544	Rat
61468	Bp15	Blood pressure QTL 15	4.4		blood pressure trait (VT:0000183)	pulse pressure (CMO:0000292)	3	1	33278763	Rat
1358185	Ept6	Estrogen-induced pituitary tumorigenesis QTL 6	6.7		pituitary gland mass (VT:0010496)	pituitary gland wet weight (CMO:0000853)	3	6537645	10778823	Rat
631831	Alc8	Alcohol consumption QTL 8	2.7		consumption behavior trait (VT:0002069)	calculated ethanol drink intake rate (CMO:0001615)	3	1	33230976	Rat

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	nervous system	renal system	reproductive system	respiratory system
9	11	49	113	91	90	59	25	59	6	218	97	93	45	60	31

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001168549	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001415687	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006233672	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006233674	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006233675	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006233677	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017591633	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017591634	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017591635	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017591636	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017591637	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039104722	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039104723	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063283467	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	CH474001	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ211685	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000003	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000024163 ⟹ ENSRNOP00000024163

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	3	8,746,176 - 8,806,072 (-)	Ensembl
Rnor_6.0 Ensembl	3	3,373,971 - 3,434,027 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000078020 ⟹ ENSRNOP00000073547

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	3	8,746,176 - 8,805,146 (-)	Ensembl
Rnor_6.0 Ensembl	3	3,375,247 - 3,433,148 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000099628 ⟹ ENSRNOP00000081912

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	3	8,746,176 - 8,806,072 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000101799 ⟹ ENSRNOP00000088653

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	3	8,746,176 - 8,806,072 (-)	Ensembl

RefSeq Acc Id:

NM_001168549 ⟹ NP_001162021

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	29,144,318 - 29,204,184 (-)	NCBI
mRatBN7.2	3	8,746,176 - 8,806,045 (-)	NCBI
Rnor_6.0	3	3,373,971 - 3,434,027 (-)	NCBI
Rnor_5.0	3	8,736,053 - 8,796,109 (-)	NCBI
RGSC_v3.4	3	4,098,538 - 4,159,591 (-)	RGD
Celera	3	3,569,327 - 3,629,181 (-)	RGD

Sequence:

show sequence

AGTGCGCCTGCGTGACGCGGCGGCGGCGCGTTAGCTCCCACCCGTTGGCAGCCGCCTCAGCTGC
CGCTTCTCCGGGGCCGCGCACGCGCCGCCGCCGCCGCCCCCGGCCCGTGCTCGCACCGCGCCTG
CCTCGCGCCTACCTTGGCCGGCGCTTGCCCGCTGCCGCCTGCCCGGCCTGCTCGGCGCCTTCTC
GGCCTCGGCTCGGCGCCCGGAGCATGCAGCAGCAGCCTGGGTGGCGGCGGCGGCCGTGAAGTAA
GGGCCGTGCGCCCGGGCGGGCGGCGCGGGAGGGCGGCGGCGTCTTTGTTGCGGCCGGGCCGCCG
CGGCCTTTGTCTGCAGATGGTGGACGCGGGCGGTCGCTCTGCCGCCGAAGGCTGGAGGAGGATG
GAGGCACCCCCGGAGGGCGCGGACCTGGTGCCGCTGGACCGCTACGACGCGGCGCGGGCCAAGA
TCGCCGCCAACCTGCAGTGGATCTGTGCGAAGGCCTATGGCCTAGACAACATCCCTGAGGATCT
CCGAGACCCGTTTTACATCGACCAGTATGAGCAGGAGCACATTAAGCCACCTGTTATTAAGCTG
CTCCTGTCCAGTGAGCTGTACTGCCGTGTCTGCAGCCTCATCTTGAAAGGGGACCAGGCAGCTA
CCTTGCAAGGACATCAGTCTGTCATCCAGGCCCTGTCCCGGAAGGGCATCTATGTGATGGAGAG
TGATGATACCCCTGTGACAGATGCTGATCTCAGCCAGGCACCTATTAAGATGAGTGGCCACATG
GCGATGGTGGATGCCCTGATGATGGCCTATACTGTGGAGATGATCAGCATTGAGAAGGTGGTGG
CCAGTGTCAAGCGTTTTTCTACGTTCAGCGCCTCAAAAGAACTTCCTTATGACCTTGAGGATGC
CATGGTGTTCTGGATCAATAAGGTAAATCTTAAAATGAGAGAGATAACAGAGAAAGAAGTTAAA
TTAAAACAGCAGCCACTGGAAAGTCCCGCTCATCAAAAGCCTGGCCTGGAGCATGCTGTGATGC
ACTGCATGCTGGAACCTGTGGACTTTGCACGTGTGGTCCGCTATCGGCGAGAACACCTCTCTGC
TAGGCAGTCACCCTACTTCCCGTTGTTGGAGGACTTGATGAGAGACGGCAGTGATGGCGCTGCT
CTCTTAGCAGTGGTTCACTATTACTGCCCAGAGCAGATGAAACTGGATGACATTTGCCTGAAGG
AGGTGCCATCGATGGCTGACAGCCTGTATAACATCCGGCTTCTGAGGGAGTTTTCCAACGAGCA
TCTGAACAAGTGTTTCTATCTCACCCTGGAGGATATGCTGTATGCTCCCCTAGTGCTGAAGCCA
AACGTTATGGTTTTTATCGCTGAGCTCTTCTGGTGGTTTGAGAACGTCAAACCCGATTTTGTTC
AGCCCCGAGATATTCAAGAGCTGAAGGATGCTAAAACGGTGTTACAGCAGAAGAGCAGCCGACC
TCCTGTCCCGATCTCCAATGCAACCAAGCGCAGCTTCCTAGGTAGTCCTGCTGCCATGAGCCCC
GCTGACCTGCCGCCATCCACCCAGCCTCTCACTGAAGGCAGTCATCGGTACCACCTCCACTCAG
AAGAACCTGAGTGTCTTGGGAAAGGAGCCTCCACGTTTAGTCCATCCCATCCTTTGTTGCCACT
GAGACAGAAGCAGCAGAAAGTGTCACAGGCTGAGGAGATCCCTGATCAGCGACACAGATCGAAT
TCTTTAACTCGGGCTGATGGTCAGCCACGAGGTGCAGCAATAGCATGGCCAGATAAAAAAAACA
GGCCTGTGTCACAGCCAACATCATTTGCTCTCCATCATGCAGCAAGTTGTGATGTGGACCCCAG
TTCTGGTGACAGTATCAGCTTAGCCCGCTCTATCAGCAAAGATAGCCTAGCATCTAACATCATC
CACCTGACGCCACAGAACCAACCCCATCCTTCTGCCGGAAAGACCAATGGGAAAAGCCTCCTGA
GCAACGTCAACATTGAGGATGATGAGGAGGAGGAGCTTGTAGCCATCATCAGGACAGATGTGTC
TCCTCATTCCCCAGAGATTCCCAGGACCTCACCTCAGGCCCCAGGCTTGGTGGCAAGTATCAGG
TCTCCCCAGAGACAGGCAGACACTTTGGAGAGTAAGCCTGACAGTTTTTACTTAGAGCCCCTGA
TGCCAGCAGTACTCCGGCCAGCCAAAGAGAAACAGATTATCACTAAGGAAGATGAGCGCGGAGA
AGGGAGGCCAAGGACCATCATGGCCAAGAGGCCTAGTGAGGGCTCCCAGCCTCTGGTACGGAAG
AAAGTGACTGGTAGTCATGGTAGTCGTGACCTGAACAGAACTTTCACCCCAATTCCTTGTTCAG
AATTTGCTGCGAGCATTGATCCTACAGAGGTGGGACCACAGTCAACAGAAGCCACAGGGGAAGG
ACAGCCTCTGGCTCTGGGTAGATTTGATCCAGTACCTCAGGGGCAGGTTGCTGATGGCTTCTTT
CTCCATGTAGGCAGGGCCGAGGAAGATGAGGGGAGGTGGTATGTTGGTTCACAGAGTCCCAGCT
CCCATGACTCTGAACCCTGGACCATCCTGAGGCAGGACTCGGACTCCGATGTGGTGGATGTAGA
GGATGCAGAGCAGGATTTTATTGGTGAGGACCATCCTGTAGTCATCCCCAGATACGCTGGTGAG
GAAGAATCAGCCAAGCTACAAGAGGATATGAAAGTGAAGGAGCACGAAGACAAGGATGACGCTA
GTGGCCGCTCGAGCCCTTGTCTGAGCACGACTTCTCAGCTCAGCAGCATGTCCATGGCCAGTGG
AAGTGTGAAGATGACCAGTTTTGCTGAAAGAAAACTGCAGCGGCTCAACAGCTGCGAGACCAAG
TCCAGCACCAGCAGCTCCCAGAAGACCACCCCAGATGCCTCGGAAAGCTGCCCAGCCCCTCTGA
CAACATGGCGTCAGAAGAGGGAGCAGAGCCCCAGCCGGCACAGCAAGGACCCCGCCAGCCTGCT
GGCTTCTGAGCTGGTGCAGCTTCACATGCAGCTGGAGGAGAAGCGCAGAGCCATTGAAGCTCAG
AAGAAAAAGATGGAGGCGCTGTCTGCACGGCAGCGTCTGAAGCTGGGGAAGGCGGCTTTTCTGC
ACGTGGTGAAAAAAGGGAAGGCTGATGGTGCCCCACAGCCACTGAGACCCGAACACTTCACGAA
GGAATTCACACAACACAATGGGGAGGACTTGGATGACGGCACTTGTAAAACTGAAGGGTTCCTT
GTCAAAGAAGAGCAGAGAGATCTCAGTGACTCTCAGGATGTGGCATTTGTCCAGCTCCATAAAC
CCAGGGACCCAGCTACTCTGCATGACGGAGAGAAGCACAGAGTGATTTCTGCTGCTCTCCTAGA
GGACAGTGTTGGTGAGGTAGACGTGAATGAATGTGACCTGTCCATTGAGAAGCTCAACGAGACC
ATCAGTACACTGCAGCAGGCCATATTGAAGATCTCCCAGCAGCAAGAGCAGCTTCTCATGAAGT
CCCCTACAGTGCCAACATCAGGCACTAAAAACAACTGCCAGGACCAAAAAGTAAAGGCCCCAGT
CCACTTTGTTGAGCCGCTCTCTCCAACTGGGGTGCCTGGCCACCGCAAACCCCCACGGCTCGGC
CAGGGCCGCAATTCCCGCTCAGGAAGGCCAGCTGAACTGAAGGTTCCAAAAGACAGGCAGCAGG
GTTGTTCTCGGAGCAAAACACCAACACCCAGTGTGGAGACACTCCCACATTCAAGGTCTTTACC
CCCAAGCACCCATCCACGGTCACCCTTGGACCCAGGTGGGGAACTCCCTGAGAAGTGTCTCTTT
GACAGTTACAGGCTCCATGATGAGAGTAACCATCGGACATTTGGTCTGTCCTCTTGTAAAGATG
CCAACATCGTATCAGAACAGATGAACTTTAAAGAGGGTCTGGATACAAGTGTCCAAGAGGCAGA
GCTGAGCTCCTCTGCCATCACAGGGAAAGAGCATACTCCCATGGAGGAGCCGCTGAGGAGCAAG
GCCAGCCTCATTGAGGTGGACCTCTCTGACCTGAAGGCCCCTGATGAGGATGGAGAGGTGGTTG
GACATGAGAGCTCGCTGGAGCTTGGTGGAGAGAGTGACCAGAAGCCTGGGGTTGGCTTCTTCTT
CAAGGATGAACAGAAAGCAGAGGATGAGCTTGCTAAGAAGCGGGCAGCCTTCCTTCTGAAACAG
CAGCGCAAGGCTGAAGAGGCTCGTGCACGCAAGCAGCAGCTGGAGGCGGAAGTGGAGCTCAAGC
GAGATGAAGCCCGGCGTAAGGCCGAAGAGGACCGATTACGGAAGGAGGAGGAGAAGGCGAGGCG
AGAGCTCATTAAACAGGAGTACTTGCGGAGGAAGCAGCAGCAAGCCTTGGAGGAGCAAGGGCTT
GGCAAACCTAAATCAAAGCCTAAAAAGCCTCGGCCAAAGTCAGTTCACCGGGAGGAGTCTTGCA
GCGACTCTGGCACCAAGTGCTCTTCTACCCCAGATAACTTGAGCCAGACTCACTCTGGCTCTAG
CCTGTCCTTGGCATCTGCAGCAACGACAGAACCTGAAAGTGTTCACTCGGGGGGCACACCTTCT
CACCGAGTTGAATCACTGGAAGCCTTACCTATCCTGAGTCGCAACCCCAGTCGGAGCACAGACC
GAGACTGGGAGACTGCATCGGCAGCTTCCTCTTTGGCCTCTGTGGCCGAGTACACAGGTCCTAA
ACTGTTTAAGGAGCCCAGTAGCAAATCAAACAAACCAATTATTCACAACGCCATCTCCCACTGC
TGTCTGGCTGGAAAAGTGAATGAACCTCACAAGAATTCAATATTGGAGGAGCTGGAGAAGTGTG
ACGCCAACCACTATATCATCCTGTTCCGAGACGCCGGCTGCCAGTTCAGGGCTCTTTACTGCTA
CCAGCCCGACACTGAAGAGATCTACAAACTCACTGGCACGGGGCCCAAGAGCATCACCAAGAAG
ATGATTGACAAACTGTATAAATACAGCTCAGACCGGAAGCAGTTTAACCTGATCCCAGCCAAGA
CCATGTCTGTCAGCGTGGATGCACTCACGATCCATAACCACTTGTGGCAGCCCAAGCGGCCCAC
AGTGCCAAAGAAGACCCAGACTCGTAAGTGACCACGGCAGGCAGGACCCTGAGCGGATGTGCTG
ACGGGATCCCTATTTATTATTTTCATGCATTTGGTACGAAGCGTGGCGGGCCTCGGACAGTTCC
CTACAGAGGTTCTTAGAGAACAGGAGATCCTCTCCCCCTGCACACACGGACGGATGCGTCTACA
GGACTGACCTGTGCTCTCATGGGCATGGCTGCTGTGACCCTGCTGACCACTGAGGTCCTCACAA
TAAGGGACACCATGGAGTGAGTGAGATCCTGGGCTGTGGCCCCCTCACTTGAAGTCCGTCAGGA
TAAGTTAAATGTGATCTGCGCTCTGGCCTCCCTTCACCCCGTGCACATTGCCCGACGCCCCCTG
CTGGCAGCTGTAATCATGCGCGGTTATAGGGCCGAGGCTCGTTCGGGTCAGGGTGTGTGAATGT
CTTCATAAAAGGAGTTCGTATGGGAAATGTTTTTCACTTTAGAAATTGTATGATATTTATTGAC
TGTGTCTACTGCCAACCTTTATATCCAGTTCTAAGATTTCTGAAAAAAACAAAACAAAACAAAA
AAAACCTGTTCCTTGCTGCTCAGAAAAAGTTTACTGAAAAATGTCAGTTCACTAAAAGCACTGA
AATCAGCAAAGTTTGTCTTCTGCTAAAATGACGTTTACATATTTGGAGTGAGTATTTCTGCCAC
ACAGTCGGGAGGGTTGTGGGGTGCTGCTAGCTGATGCTGACTTCATTGGGAGCAGACAGCTAAG
CCGACGTTAGCCACCACCGGTTAGGTCTGAGGTATGTGCTGGTGTATTCACTTTCATAAAGGCA
GACTTTGGTATAGTAGCGACTTTCCACCCTTGGCTGCCAGTTCCTTCGTGGTGTTATGGTGGCC
TGGCTGGCTACCATAGCTGTTGCTTCTGGAAGAACGCATGCTCGGTGCGGTGTGCAGTCTCAGG
TGAGGTTGGTGATTCTGCTTTTTGCCTCCTTTAAAACTTGGTGGTTATTTGCAATTATTTCAGA
ATGGCGTAGCTGCTTCAGGTCTCTTCCCCCTGGTCCCTGTGGTGGCTGATTGCCTCAGAACAGT
TCCTGGGGAGCAGGGGCGCCCCAGCGATGGGTCAGCAGAGTGAAAGAAGACCCTGGAGCCACTC
GTAGTTTTGCACATTTCTTTTTGAGAGTGTTACTTGAATCTGTCCCAACCACAGGAGAGCATTG
AAGATAACAGAGGGGACTCAGATGTCCACGGCTTAGCCCACCCCGGCAGTGTCAGGTAGATAGC
AAAGGAGCATGGGGCAGAAATGCTGGAGGGGTGAGCTGAGGTCTTGTCTTCTCCTTTGTGACTG
TGTATCCAGTCGGGTGGCGCTGTGCTGTGTGAGCATTAAAGTCTGTGACTACCTGTCACCAGCT
GCCCCGTGTCTTCATTTCTCACTGTGCACTTGATGTTACCATATTTATTTTAAGAGAGCACTAA
AATGTAATAAAGTAATGAGCTGGCTTTCTGTTAA

hide sequence

RefSeq Acc Id:

NM_001415687 ⟹ NP_001402616

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	29,144,318 - 29,204,184 (-)	NCBI
mRatBN7.2	3	8,746,176 - 8,806,045 (-)	NCBI

RefSeq Acc Id:

XM_006233672 ⟹ XP_006233734

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	29,144,318 - 29,206,382 (-)	NCBI
mRatBN7.2	3	8,746,176 - 8,806,067 (-)	NCBI
Rnor_6.0	3	3,373,971 - 3,433,776 (-)	NCBI
Rnor_5.0	3	8,736,053 - 8,796,109 (-)	NCBI

Sequence:

show sequence

AGTAAGGGCCGTGCGCCCGGGCGGGCGGCGCGGGAGGGCGGCGGCGTCTTTGTTGCGGCCGGGC
CGCCGCGGCCTTTGTCTGCAGATGGTGGACGCGGGCGGTCGCTCTGCCGCCGAAGGCTGGAGGA
GGATGGAGGCACCCCCGGAGGGCGCGGACCTGGTGCCGCTGGACCGCTACGACGCGGCGCGGGC
CAAGATCGCCGCCAACCTGCAGTGGATCTGTGCGAAGGCCTATGGCCTAGACAACATCCCTGAG
GATCTCCGAGACCCGTTTTACATCGACCAGTATGAGCAGGAGCACATTAAGCCACCTGTTATTA
AGCTGCTCCTGTCCAGTGAGCTGTACTGCCGTGTCTGCAGCCTCATCTTGAAAGGGGACCAGGC
AGCTACCTTGCAAGGACATCAGTCTGTCATCCAGGCCCTGTCCCGGAAGGGCATCTATGTGATG
GAGAGTGATGATACCCCTGTGACAGATGCTGATCTCAGCCAGGCACCTATTAAGATGAGTGGCC
ACATGGCGATGGTGGATGCCCTGATGATGGCCTATACTGTGGAGATGATCAGCATTGAGAAGGT
GGTGGCCAGTGTCAAGCGTTTTTCTACGTTCAGCGCCTCAAAAGAACTTCCTTATGACCTTGAG
GATGCCATGGTGTTCTGGATCAATAAGGTAAATCTTAAAATGAGAGAGATAACAGAGAAAGAAG
TTAAATTAAAACAGCAGCCACTGGAAAGTCCCGCTCATCAAAAGTCTCCCTCCAAGTGGTATTG
GAAGTTAGTACCCGTCCGCTATCGGCGAGAACACCTCTCTGCTAGGCAGTCACCCTACTTCCCG
TTGTTGGAGGACTTGATGAGAGACGGCAGTGATGGCGCTGCTCTCTTAGCAGTGGTTCACTATT
ACTGCCCAGAGCAGATGAAACTGGATGACATTTGCCTGAAGGAGGTGCCATCGATGGCTGACAG
CCTGTATAACATCCGGCTTCTGAGGGAGTTTTCCAACGAGCATCTGAACAAGTGTTTCTATCTC
ACCCTGGAGGATATGCTGTATGCTCCCCTAGTGCTGAAGCCAAACGTTATGGTTTTTATCGCTG
AGCTCTTCTGGTGGTTTGAGAACGTCAAACCCGATTTTGTTCAGCCCCGAGATATTCAAGAGCT
GAAGGATGCTAAAACGGTGTTACAGCAGAAGAGCAGCCGACCTCCTGTCCCGATCTCCAATGCA
ACCAAGCGCAGCTTCCTAGGTAGTCCTGCTGCCATGAGCCCCGCTGACCTGCCGCCATCCACCC
AGCCTCTCACTGAAGGCAGTCATCGGTACCACCTCCACTCAGAAGAACCTGAGTGTCTTGGGAA
AGGAGCCTCCACGTTTAGTCCATCCCATCCTTTGTTGCCACTGAGACAGAAGCAGCAGAAAGTG
TCACAGGCTGAGGAGATCCCTGATCAGCGACACAGATCGAATTCTTTAACTCGGGCTGATGGTC
AGCCACGAGGTGCAGCAATAGCATGGCCAGATAAAAAAAACAGGCCTGTGTCACAGCCAACATC
ATTTGCTCTCCATCATGCAGCAAGTTGTGATGTGGACCCCAGTTCTGGTGACAGTATCAGCTTA
GCCCGCTCTATCAGCAAAGATAGCCTAGCATCTAACATCATCCACCTGACGCCACAGAACCAAC
CCCATCCTTCTGCCGGAAAGACCAATGGGAAAAGCCTCCTGAGCAACGTCAACATTGAGGATGA
TGAGGAGGAGGAGCTTGTAGCCATCATCAGGACAGATGTGTCTCCTCATTCCCCAGAGATTCCC
AGGACCTCACCTCAGGCCCCAGGCTTGGTGGCAAGTATCAGGTCTCCCCAGAGACAGGCAGACA
CTTTGGAGAGTAAGCCTGACAGTTTTTACTTAGAGCCCCTGATGCCAGCAGTACTCCGGCCAGC
CAAAGAGAAACAGATTATCACTAAGGAAGATGAGCGCGGAGAAGGGAGGCCAAGGACCATCATG
GCCAAGAGGCCTAGTGAGGGCTCCCAGCCTCTGGTACGGAAGAAAGTGACTGGTAGTCATGGTA
GTCGTGACCTGAACAGAACTTTCACCCCAATTCCTTGTTCAGAATTTGCTGCGAGCATTGATCC
TACAGAGGTGGGACCACAGTCAACAGAAGCCACAGGGGAAGGACAGCCTCTGGCTCTGGGTAGA
TTTGATCCAGTACCTCAGGGGCAGGTTGCTGATGGCTTCTTTCTCCATGTAGGCAGGGCCGAGG
AAGATGAGGGGAGGTGGTATGTTGGTTCACAGAGTCCCAGCTCCCATGACTCTGAACCCTGGAC
CATCCTGAGGCAGGACTCGGACTCCGATGTGGTGGATGTAGAGGATGCAGAGCAGGATTTTATT
GGTGAGGACCATCCTGTAGTCATCCCCAGATACGCTGGTGAGGAAGAATCAGCCAAGCTACAAG
AGGATATGAAAGTGAAGGAGCACGAAGACAAGGATGACGCTAGTGGCCGCTCGAGCCCTTGTCT
GAGCACGACTTCTCAGCTCAGCAGCATGTCCATGGCCAGTGGAAGTGTGAAGATGACCAGTTTT
GCTGAAAGAAAACTGCAGCGGCTCAACAGCTGCGAGACCAAGTCCAGCACCAGCAGCTCCCAGA
AGACCACCCCAGATGCCTCGGAAAGCTGCCCAGCCCCTCTGACAACATGGCGTCAGAAGAGGGA
GCAGAGCCCCAGCCGGCACAGCAAGGACCCCGCCAGCCTGCTGGCTTCTGAGCTGGTGCAGCTT
CACATGCAGCTGGAGGAGAAGCGCAGAGCCATTGAAGCTCAGAAGAAAAAGATGGAGGCGCTGT
CTGCACGGCAGCGTCTGAAGCTGGGGAAGGCGGCTTTTCTGCACGTGGTGAAAAAAGGGAAGGC
TGATGGTGCCCCACAGCCACTGAGACCCGAACACTTCACGAAGGAATTCACACAACACAATGGG
GAGGACTTGGATGACGGCACTTGTAAAACTGAAGGGTTCCTTGTCAAAGAAGAGCAGAGAGATC
TCAGTGACTCTCAGGATGTGGCATTTGTCCAGCTCCATAAACCCAGGGACCCAGCTACTCTGCA
TGACGGAGAGAAGCACAGAGTGATTTCTGCTGCTCTCCTAGAGGACAGTGTTGGTGAGGTAGAC
GTGAATGAATGTGACCTGTCCATTGAGAAGCTCAACGAGACCATCAGTACACTGCAGCAGGCCA
TATTGAAGATCTCCCAGCAGCAAGAGCAGCTTCTCATGAAGTCCCCTACAGTGCCAACATCAGG
CACTAAAAACAACTGCCAGGACCAAAAAGTAAAGGCCCCAGTCCACTTTGTTGAGCCGCTCTCT
CCAACTGGGGTGCCTGGCCACCGCAAACCCCCACGGCTCGGCCAGGGCCGCAATTCCCGCTCAG
GAAGGCCAGCTGAACTGAAGGTTCCAAAAGACAGGCAGCAGGGTTGTTCTCGGAGCAAAACACC
AACACCCAGTGTGGAGACACTCCCACATTCAAGGTCTTTACCCCCAAGCACCCATCCACGGTCA
CCCTTGGACCCAGGTGGGGAACTCCCTGAGAAGTGTCTCTTTGACAGTTACAGGCTCCATGATG
AGAGTAACCATCGGACATTTGGTCTGTCCTCTTGTAAAGATGCCAACATCGTATCAGAACAGAT
GAACTTTAAAGAGGGTCTGGATACAAGTGTCCAAGAGGCAGAGCTGAGCTCCTCTGCCATCACA
GGGAAAGAGCATACTCCCATGGAGGAGCCGCTGAGGAGCAAGGCCAGCCTCATTGAGGTGGACC
TCTCTGACCTGAAGGCCCCTGATGAGGATGGAGAGGTGGTTGGACATGAGAGCTCGCTGGAGCT
TGGTGGAGAGAGTGACCAGAAGCCTGGGGTTGGCTTCTTCTTCAAGGATGAACAGAAAGCAGAG
GATGAGCTTGCTAAGAAGCGGGCAGCCTTCCTTCTGAAACAGCAGCGCAAGGCTGAAGAGGCTC
GTGCACGCAAGCAGCAGCTGGAGGCGGAAGTGGAGCTCAAGCGAGATGAAGCCCGGCGTAAGGC
CGAAGAGGACCGATTACGGAAGGAGGAGGAGAAGGCGAGGCGAGAGCTCATTAAACAGGAGTAC
TTGCGGAGGAAGCAGCAGCAAGCCTTGGAGGAGCAAGGGCTTGGCAAACCTAAATCAAAGCCTA
AAAAGCCTCGGCCAAAGTCAGTTCACCGGGAGGAGTCTTGCAGCGACTCTGGCACCAAGTGCTC
TTCTACCCATAACTTGAGCCAGACTCACTCTGGCTCTAGCCTGTCCTTGGCATCTGCAGCAACG
ACAGAACCTGAAAGTGTTCACTCGGGGGGCACACCTTCTCACCGAGTTGAATCACTGGAAGCCT
TACCTATCCTGAGTCGCAACCCCAGTCGGAGCACAGACCGAGACTGGGAGACTGCATCGGCAGC
TTCCTCTTTGGCCTCTGTGGCCGAGTACACAGGTCCTAAACTGTTTAAGGAGCCCAGTAGCAAA
TCAAACAAACCAATTATTCACAACGCCATCTCCCACTGCTGTCTGGCTGGAAAAGTGAATGAAC
CTCACAAGAATTCAATATTGGAGGAGCTGGAGAAGTGTGACGCCAACCACTATATCATCCTGTT
CCGAGACGCCGGCTGCCAGTTCAGGGCTCTTTACTGCTACCAGCCCGACACTGAAGAGATCTAC
AAACTCACTGGCACGGGGCCCAAGAGCATCACCAAGAAGATGATTGACAAACTGTATAAATACA
GCTCAGACCGGAAGCAGTTTAACCTGATCCCAGCCAAGACCATGTCTGTCAGCGTGGATGCACT
CACGATCCATAACCACTTGTGGCAGCCCAAGCGGCCCACAGTGCCAAAGAAGACCCAGACTCGT
AAGTGACCACGGCAGGCAGGACCCTGAGCGGATGTGCTGACGGGATCCCTATTTATTATTTTCA
TGCATTTGGTACGAAGCGTGGCGGGCCTCGGACAGTTCCCTACAGAGGTTCTTAGAGAACAGGA
GATCCTCTCCCCCTGCACACACGGACGGATGCGTCTACAGGACTGACCTGTGCTCTCATGGGCA
TGGCTGCTGTGACCCTGCTGACCACTGAGGTCCTCACAATAAGGGACACCATGGAGTGAGTGAG
ATCCTGGGCTGTGGCCCCCTCACTTGAAGTCCGTCAGGATAAGTTAAATGTGATCTGCGCTCTG
GCCTCCCTTCACCCCGTGCACATTGCCCGACGCCCCCTGCTGGCAGCTGTAATCATGCGCGGTT
ATAGGGCCGAGGCTCGTTCGGGTCAGGGTGTGTGAATGTCTTCATAAAAGGAGTTCGTATGGGA
AATGTTTTTCACTTTAGAAATTGTATGATATTTATTGACTGTGTCTACTGCCAACCTTTATATC
CAGTTCTAAGATTTCTGAAAAAAACAAAACAAAACAAAAAAAACCTGTTCCTTGCTGCTCAGAA
AAAGTTTACTGAAAAATGTCAGTTCACTAAAAGCACTGAAATCAGCAAAGTTTGTCTTCTGCTA
AAATGACGTTTACATATTTGGAGTGAGTATTTCTGCCACACAGTCGGGAGGGTTGTGGGGTGCT
GCTAGCTGATGCTGACTTCATTGGGAGCAGACAGCTAAGCCGACGTTAGCCACCACCGGTTAGG
TCTGAGGTATGTGCTGGTGTATTCACTTTCATAAAGGCAGACTTTGGTATAGTAGCGACTTTCC
ACCCTTGGCTGCCAGTTCCTTCGTGGTGTTATGGTGGCCTGGCTGGCTACCATAGCTGTTGCTT
CTGGAAGAACGCATGCTCGGTGCGGTGTGCAGTCTCAGGTGAGGTTGGTGATTCTGCTTTTTGC
CTCCTTTAAAACTTGGTGGTTATTTGCAATTATTTCAGAATGGCGTAGCTGCTTCAGGTCTCTT
CCCCCTGGTCCCTGTGGTGGCTGATTGCCTCAGAACAGTTCCTGGGGAGCAGGGGCGCCCCAGC
GATGGGTCAGCAGAGTGAAAGAAGACCCTGGAGCCACTCGTAGTTTTGCACATTTCTTTTTGAG
AGTGTTACTTGAATCTGTCCCAACCACAGGAGAGCATTGAAGATAACAGAGGGGACTCAGATGT
CCACGGCTTAGCCCACCCCGGCAGTGTCAGGTAGATAGCAAAGGAGCATGGGGCAGAAATGCTG
GAGGGGTGAGCTGAGGTCTTGTCTTCTCCTTTGTGACTGTGTATCCAGTCGGGTGGCGCTGTGC
TGTGTGAGCATTAAAGTCTGTGACTACCTGTCACCAGCTGCCCCGTGTCTTCATTTCTCACTGT
GCACTTGATGTTACCATATTTATTTTAAGAGAGCACTAAAATGTAATAAAGTAATGAGCTGGCT
TTCTGTTAA

hide sequence

RefSeq Acc Id:

XM_006233674 ⟹ XP_006233736

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	29,144,318 - 29,206,381 (-)	NCBI
mRatBN7.2	3	8,746,176 - 8,806,067 (-)	NCBI
Rnor_6.0	3	3,373,971 - 3,433,776 (-)	NCBI
Rnor_5.0	3	8,736,053 - 8,796,109 (-)	NCBI

Sequence:

show sequence

AGTAAGGGCCGTGCGCCCGGGCGGGCGGCGCGGGAGGGCGGCGGCGTCTTTGTTGCGGCCGGGC
CGCCGCGGCCTTTGTCTGCAGATGGTGGACGCGGGCGGTCGCTCTGCCGCCGAAGGCTGGAGGA
GGATGGAGGCACCCCCGGAGGGCGCGGACCTGGTGCCGCTGGACCGCTACGACGCGGCGCGGGC
CAAGATCGCCGCCAACCTGCAGTGGATCTGTGCGAAGGCCTATGGCCTAGACAACATCCCTGAG
GATCTCCGAGACCCGTTTTACATCGACCAGTATGAGCAGGAGCACATTAAGCCACCTGTTATTA
AGCTGCTCCTGTCCAGTGAGCTGTACTGCCGTGTCTGCAGCCTCATCTTGAAAGGGGACCAGGC
AGCTACCTTGCAAGGACATCAGTCTGTCATCCAGGCCCTGTCCCGGAAGGGCATCTATGTGATG
GAGAGTGATGATACCCCTGTGACAGATGCTGATCTCAGCCAGGCACCTATTAAGATGAGTGGCC
ACATGGCGATGGTGGATGCCCTGATGATGGCCTATACTGTGGAGATGATCAGCATTGAGAAGGT
GGTGGCCAGTGTCAAGCGTTTTTCTACGTTCAGCGCCTCAAAAGAACTTCCTTATGACCTTGAG
GATGCCATGGTGTTCTGGATCAATAAGGTAAATCTTAAAATGAGAGAGATAACAGAGAAAGAAG
TTAAATTAAAACAGCAGCCACTGGAAAGTCCCGCTCATCAAAAGGTCCGCTATCGGCGAGAACA
CCTCTCTGCTAGGCAGTCACCCTACTTCCCGTTGTTGGAGGACTTGATGAGAGACGGCAGTGAT
GGCGCTGCTCTCTTAGCAGTGGTTCACTATTACTGCCCAGAGCAGATGAAACTGGATGACATTT
GCCTGAAGGAGGTGCCATCGATGGCTGACAGCCTGTATAACATCCGGCTTCTGAGGGAGTTTTC
CAACGAGCATCTGAACAAGTGTTTCTATCTCACCCTGGAGGATATGCTGTATGCTCCCCTAGTG
CTGAAGCCAAACGTTATGGTTTTTATCGCTGAGCTCTTCTGGTGGTTTGAGAACGTCAAACCCG
ATTTTGTTCAGCCCCGAGATATTCAAGAGCTGAAGGATGCTAAAACGGTGTTACAGCAGAAGAG
CAGCCGACCTCCTGTCCCGATCTCCAATGCAACCAAGCGCAGCTTCCTAGGTAGTCCTGCTGCC
ATGAGCCCCGCTGACCTGCCGCCATCCACCCAGCCTCTCACTGAAGGCAGTCATCGGTACCACC
TCCACTCAGAAGAACCTGAGTGTCTTGGGAAAGGAGCCTCCACGTTTAGTCCATCCCATCCTTT
GTTGCCACTGAGACAGAAGCAGCAGAAAGTGTCACAGGCTGAGGAGATCCCTGATCAGCGACAC
AGATCGAATTCTTTAACTCGGGCTGATGGTCAGCCACGAGGTGCAGCAATAGCATGGCCAGATA
AAAAAAACAGGCCTGTGTCACAGCCAACATCATTTGCTCTCCATCATGCAGCAAGTTGTGATGT
GGACCCCAGTTCTGGTGACAGTATCAGCTTAGCCCGCTCTATCAGCAAAGATAGCCTAGCATCT
AACATCATCCACCTGACGCCACAGAACCAACCCCATCCTTCTGCCGGAAAGACCAATGGGAAAA
GCCTCCTGAGCAACGTCAACATTGAGGATGATGAGGAGGAGGAGCTTGTAGCCATCATCAGGAC
AGATGTGTCTCCTCATTCCCCAGAGATTCCCAGGACCTCACCTCAGGCCCCAGGCTTGGTGGCA
AGTATCAGGTCTCCCCAGAGACAGGCAGACACTTTGGAGAGTAAGCCTGACAGTTTTTACTTAG
AGCCCCTGATGCCAGCAGTACTCCGGCCAGCCAAAGAGAAACAGATTATCACTAAGGAAGATGA
GCGCGGAGAAGGGAGGCCAAGGACCATCATGGCCAAGAGGCCTAGTGAGGGCTCCCAGCCTCTG
GTACGGAAGAAAGTGACTGGTAGTCATGGTAGTCGTGACCTGAACAGAACTTTCACCCCAATTC
CTTGTTCAGAATTTGCTGCGAGCATTGATCCTACAGAGGTGGGACCACAGTCAACAGAAGCCAC
AGGGGAAGGACAGCCTCTGGCTCTGGGTAGATTTGATCCAGTACCTCAGGGGCAGGTTGCTGAT
GGCTTCTTTCTCCATGTAGGCAGGGCCGAGGAAGATGAGGGGAGGTGGTATGTTGGTTCACAGA
GTCCCAGCTCCCATGACTCTGAACCCTGGACCATCCTGAGGCAGGACTCGGACTCCGATGTGGT
GGATGTAGAGGATGCAGAGCAGGATTTTATTGGTGAGGACCATCCTGTAGTCATCCCCAGATAC
GCTGGTGAGGAAGAATCAGCCAAGCTACAAGAGGATATGAAAGTGAAGGAGCACGAAGACAAGG
ATGACGCTAGTGGCCGCTCGAGCCCTTGTCTGAGCACGACTTCTCAGCTCAGCAGCATGTCCAT
GGCCAGTGGAAGTGTGAAGATGACCAGTTTTGCTGAAAGAAAACTGCAGCGGCTCAACAGCTGC
GAGACCAAGTCCAGCACCAGCAGCTCCCAGAAGACCACCCCAGATGCCTCGGAAAGCTGCCCAG
CCCCTCTGACAACATGGCGTCAGAAGAGGGAGCAGAGCCCCAGCCGGCACAGCAAGGACCCCGC
CAGCCTGCTGGCTTCTGAGCTGGTGCAGCTTCACATGCAGCTGGAGGAGAAGCGCAGAGCCATT
GAAGCTCAGAAGAAAAAGATGGAGGCGCTGTCTGCACGGCAGCGTCTGAAGCTGGGGAAGGCGG
CTTTTCTGCACGTGGTGAAAAAAGGGAAGGCTGATGGTGCCCCACAGCCACTGAGACCCGAACA
CTTCACGAAGGAATTCACACAACACAATGGGGAGGACTTGGATGACGGCACTTGTAAAACTGAA
GGGTTCCTTGTCAAAGAAGAGCAGAGAGATCTCAGTGACTCTCAGGATGTGGCATTTGTCCAGC
TCCATAAACCCAGGGACCCAGCTACTCTGCATGACGGAGAGAAGCACAGAGTGATTTCTGCTGC
TCTCCTAGAGGACAGTGTTGGTGAGGTAGACGTGAATGAATGTGACCTGTCCATTGAGAAGCTC
AACGAGACCATCAGTACACTGCAGCAGGCCATATTGAAGATCTCCCAGCAGCAAGAGCAGCTTC
TCATGAAGTCCCCTACAGTGCCAACATCAGGCACTAAAAACAACTGCCAGGACCAAAAAGTAAA
GGCCCCAGTCCACTTTGTTGAGCCGCTCTCTCCAACTGGGGTGCCTGGCCACCGCAAACCCCCA
CGGCTCGGCCAGGGCCGCAATTCCCGCTCAGGAAGGCCAGCTGAACTGAAGGTTCCAAAAGACA
GGCAGCAGGGTTGTTCTCGGAGCAAAACACCAACACCCAGTGTGGAGACACTCCCACATTCAAG
GTCTTTACCCCCAAGCACCCATCCACGGTCACCCTTGGACCCAGGTGGGGAACTCCCTGAGAAG
TGTCTCTTTGACAGTTACAGGCTCCATGATGAGAGTAACCATCGGACATTTGGTCTGTCCTCTT
GTAAAGATGCCAACATCGTATCAGAACAGATGAACTTTAAAGAGGGTCTGGATACAAGTGTCCA
AGAGGCAGAGCTGAGCTCCTCTGCCATCACAGGGAAAGAGCATACTCCCATGGAGGAGCCGCTG
AGGAGCAAGGCCAGCCTCATTGAGGTGGACCTCTCTGACCTGAAGGCCCCTGATGAGGATGGAG
AGGTGGTTGGACATGAGAGCTCGCTGGAGCTTGGTGGAGAGAGTGACCAGAAGCCTGGGGTTGG
CTTCTTCTTCAAGGATGAACAGAAAGCAGAGGATGAGCTTGCTAAGAAGCGGGCAGCCTTCCTT
CTGAAACAGCAGCGCAAGGCTGAAGAGGCTCGTGCACGCAAGCAGCAGCTGGAGGCGGAAGTGG
AGCTCAAGCGAGATGAAGCCCGGCGTAAGGCCGAAGAGGACCGATTACGGAAGGAGGAGGAGAA
GGCGAGGCGAGAGCTCATTAAACAGGAGTACTTGCGGAGGAAGCAGCAGCAAGCCTTGGAGGAG
CAAGGGCTTGGCAAACCTAAATCAAAGCCTAAAAAGCCTCGGCCAAAGTCAGTTCACCGGGAGG
AGTCTTGCAGCGACTCTGGCACCAAGTGCTCTTCTACCCATAACTTGAGCCAGACTCACTCTGG
CTCTAGCCTGTCCTTGGCATCTGCAGCAACGACAGAACCTGAAAGTGTTCACTCGGGGGGCACA
CCTTCTCACCGAGTTGAATCACTGGAAGCCTTACCTATCCTGAGTCGCAACCCCAGTCGGAGCA
CAGACCGAGACTGGGAGACTGCATCGGCAGCTTCCTCTTTGGCCTCTGTGGCCGAGTACACAGG
TCCTAAACTGTTTAAGGAGCCCAGTAGCAAATCAAACAAACCAATTATTCACAACGCCATCTCC
CACTGCTGTCTGGCTGGAAAAGTGAATGAACCTCACAAGAATTCAATATTGGAGGAGCTGGAGA
AGTGTGACGCCAACCACTATATCATCCTGTTCCGAGACGCCGGCTGCCAGTTCAGGGCTCTTTA
CTGCTACCAGCCCGACACTGAAGAGATCTACAAACTCACTGGCACGGGGCCCAAGAGCATCACC
AAGAAGATGATTGACAAACTGTATAAATACAGCTCAGACCGGAAGCAGTTTAACCTGATCCCAG
CCAAGACCATGTCTGTCAGCGTGGATGCACTCACGATCCATAACCACTTGTGGCAGCCCAAGCG
GCCCACAGTGCCAAAGAAGACCCAGACTCGTAAGTGACCACGGCAGGCAGGACCCTGAGCGGAT
GTGCTGACGGGATCCCTATTTATTATTTTCATGCATTTGGTACGAAGCGTGGCGGGCCTCGGAC
AGTTCCCTACAGAGGTTCTTAGAGAACAGGAGATCCTCTCCCCCTGCACACACGGACGGATGCG
TCTACAGGACTGACCTGTGCTCTCATGGGCATGGCTGCTGTGACCCTGCTGACCACTGAGGTCC
TCACAATAAGGGACACCATGGAGTGAGTGAGATCCTGGGCTGTGGCCCCCTCACTTGAAGTCCG
TCAGGATAAGTTAAATGTGATCTGCGCTCTGGCCTCCCTTCACCCCGTGCACATTGCCCGACGC
CCCCTGCTGGCAGCTGTAATCATGCGCGGTTATAGGGCCGAGGCTCGTTCGGGTCAGGGTGTGT
GAATGTCTTCATAAAAGGAGTTCGTATGGGAAATGTTTTTCACTTTAGAAATTGTATGATATTT
ATTGACTGTGTCTACTGCCAACCTTTATATCCAGTTCTAAGATTTCTGAAAAAAACAAAACAAA
ACAAAAAAAACCTGTTCCTTGCTGCTCAGAAAAAGTTTACTGAAAAATGTCAGTTCACTAAAAG
CACTGAAATCAGCAAAGTTTGTCTTCTGCTAAAATGACGTTTACATATTTGGAGTGAGTATTTC
TGCCACACAGTCGGGAGGGTTGTGGGGTGCTGCTAGCTGATGCTGACTTCATTGGGAGCAGACA
GCTAAGCCGACGTTAGCCACCACCGGTTAGGTCTGAGGTATGTGCTGGTGTATTCACTTTCATA
AAGGCAGACTTTGGTATAGTAGCGACTTTCCACCCTTGGCTGCCAGTTCCTTCGTGGTGTTATG
GTGGCCTGGCTGGCTACCATAGCTGTTGCTTCTGGAAGAACGCATGCTCGGTGCGGTGTGCAGT
CTCAGGTGAGGTTGGTGATTCTGCTTTTTGCCTCCTTTAAAACTTGGTGGTTATTTGCAATTAT
TTCAGAATGGCGTAGCTGCTTCAGGTCTCTTCCCCCTGGTCCCTGTGGTGGCTGATTGCCTCAG
AACAGTTCCTGGGGAGCAGGGGCGCCCCAGCGATGGGTCAGCAGAGTGAAAGAAGACCCTGGAG
CCACTCGTAGTTTTGCACATTTCTTTTTGAGAGTGTTACTTGAATCTGTCCCAACCACAGGAGA
GCATTGAAGATAACAGAGGGGACTCAGATGTCCACGGCTTAGCCCACCCCGGCAGTGTCAGGTA
GATAGCAAAGGAGCATGGGGCAGAAATGCTGGAGGGGTGAGCTGAGGTCTTGTCTTCTCCTTTG
TGACTGTGTATCCAGTCGGGTGGCGCTGTGCTGTGTGAGCATTAAAGTCTGTGACTACCTGTCA
CCAGCTGCCCCGTGTCTTCATTTCTCACTGTGCACTTGATGTTACCATATTTATTTTAAGAGAG
CACTAAAATGTAATAAAGTAATGAGCTGGCTTTCTGTTAA

hide sequence

RefSeq Acc Id:

XM_006233675 ⟹ XP_006233737

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	29,144,318 - 29,206,381 (-)	NCBI
mRatBN7.2	3	8,746,176 - 8,806,067 (-)	NCBI
Rnor_6.0	3	3,373,971 - 3,433,776 (-)	NCBI
Rnor_5.0	3	8,736,053 - 8,796,109 (-)	NCBI

Sequence:

show sequence

AGTAAGGGCCGTGCGCCCGGGCGGGCGGCGCGGGAGGGCGGCGGCGTCTTTGTTGCGGCCGGGC
CGCCGCGGCCTTTGTCTGCAGATGGTGGACGCGGGCGGTCGCTCTGCCGCCGAAGGCTGGAGGA
GGATGGAGGCACCCCCGGAGGGCGCGGACCTGGTGCCGCTGGACCGCTACGACGCGGCGCGGGC
CAAGATCGCCGCCAACCTGCAGTGGATCTGTGCGAAGGCCTATGGCCTAGACAACATCCCTGAG
GATCTCCGAGACCCGTTTTACATCGACCAGTATGAGCAGGAGCACATTAAGCCACCTGTTATTA
AGCTGCTCCTGTCCAGTGAGCTGTACTGCCGTGTCTGCAGCCTCATCTTGAAAGGGGACCAGGC
AGCTACCTTGCAAGGACATCAGTCTGTCATCCAGGCCCTGTCCCGGAAGGGCATCTATGTGATG
GAGAGTGATGATACCCCTGTGACAGATGCTGATCTCAGCCAGGCACCTATTAAGATGAGTGGCC
ACATGGCGATGGTGGATGCCCTGATGATGGCCTATACTGTGGAGATGATCAGCATTGAGAAGGT
GGTGGCCAGTGTCAAGCGTTTTTCTACGTTCAGCGCCTCAAAAGAACTTCCTTATGACCTTGAG
GATGCCATGGTGTTCTGGATCAATAAGGTAAATCTTAAAATGAGAGAGATAACAGAGAAAGAAG
TTAAATTAAAACAGCAGCCACTGGAAAGTCCCGCTCATCAAAAGTCTCCCTCCAAGTGGTATTG
GAAGTTAGTACCCGTCCGCTATCGGCGAGAACACCTCTCTGCTAGGCAGTCACCCTACTTCCCG
TTGTTGGAGGACTTGATGAGAGACGGCAGTGATGGCGCTGCTCTCTTAGCAGTGGTTCACTATT
ACTGCCCAGAGCAGATGAAACTGGATGACATTTGCCTGAAGGAGGTGCCATCGATGGCTGACAG
CCTGTATAACATCCGGCTTCTGAGGGAGTTTTCCAACGAGCATCTGAACAAGTGTTTCTATCTC
ACCCTGGAGGATATGCTGTATGCTCCCCTAGTGCTGAAGCCAAACGTTATGGTTTTTATCGCTG
AGCTCTTCTGGTGGTTTGAGAACGTCAAACCCGATTTTGTTCAGCCCCGAGATATTCAAGAGCT
GAAGGATGCTAAAACGGTGTTACAGCAGAAGAGCAGCCGACCTCCTGTCCCGATCTCCAATGCA
ACCAAGCGCAGCTTCCTAGGTAGTCCTGCTGCCATGAGCCCCGCTGACCTGCCGCCATCCACCC
AGCCTCTCACTGAAGGCAGTCATCGGTACCACCTCCACTCAGAAGAACCTGAGTGTCTTGGGAA
AGGAGCCTCCACGTTTAGTCCATCCCATCCTTTGTTGCCACTGAGACAGAAGCAGCAGAAAGTG
TCACAGGCTGAGGAGATCCCTGATCAGCGACACAGATCGAATTCTTTAACTCGGGCTGATGGTC
AGCCACGAGGTGCAGCAATAGCATGGCCAGATAAAAAAAACAGGCCTGTGTCACAGCCAACATC
ATTTGCTCTCCATCATGCAGCAAGTTGTGATGTGGACCCCAGTTCTGGTGACAGTATCAGCTTA
GCCCGCTCTATCAGCAAAGATAGCCTAGCATCTAACATCATCCACCTGACGCCACAGAACCAAC
CCCATCCTTCTGCCGGAAAGACCAATGGGAAAAGCCTCCTGAGCAACGTCAACATTGAGGATGA
TGAGGAGGAGGAGCTTGTAGCCATCATCAGGACAGATGTGTCTCCTCATTCCCCAGAGATTCCC
AGGACCTCACCTCAGGCCCCAGGCTTGGTGGCAAGTATCAGGTCTCCCCAGAGACAGGCAGACA
CTTTGGAGAGTAAGCCTGACAGTTTTTACTTAGAGCCCCTGATGCCAGCAGTACTCCGGCCAGC
CAAAGAGAAACAGATTATCACTAAGGAAGATGAGCGCGGAGAAGGGAGGCCAAGGACCATCATG
GCCAAGAGGCCTAGTGAGGGCTCCCAGCCTCTGGTACGGAAGAAAGTGACTGGTAGTCATGGTA
GTCGTGACCTGAACAGAACTTTCACCCCAATTCCTTGTTCAGAATTTGCTGCGAGCATTGATCC
TACAGAGGTGGGACCACAGTCAACAGAAGCCACAGGGGAAGGACAGCCTCTGGCTCTGGGTAGA
TTTGATCCAGTACCTCAGGGGCAGGTTGCTGATGGCTTCTTTCTCCATGTAGGCAGGGCCGAGG
AAGATGAGGGGAGGTGGTATGTTGGTTCACAGAGTCCCAGCTCCCATGACTCTGAACCCTGGAC
CATCCTGAGGCAGGACTCGGACTCCGATGTGGTGGATGTAGAGGATGCAGAGCAGGATTTTATT
GGTGAGGACCATCCTGTAGTCATCCCCAGATACGCTGGTGAGGAAGAATCAGCCAAGCTACAAG
AGGATATGAAAGTGAAGGAGCACGAAGACAAGGATGACGCTAGTGGCCGCTCGAGCCCTTGTCT
GAGCACGACTTCTCAGCTCAGCAGCATGTCCATGGCCAGTGGAAGTGTGAAGATGACCAGTTTT
GCTGAAAGAAAACTGCAGCGGCTCAACAGCTGCGAGACCAAGTCCAGCACCAGCAGCTCCCAGA
AGACCACCCCAGATGCCTCGGAAAGCTGCCCAGCCCCTCTGACAACATGGCGTCAGAAGAGGGA
GCAGAGCCCCAGCCGGCACAGCAAGGACCCCGCCAGCCTGCTGGCTTCTGAGCTGGTGCAGCTT
CACATGCAGCTGGAGGAGAAGCGCAGAGCCATTGAAGCTCAGAAGAAAAAGATGGAGGCGCTGT
CTGCACGGCAGCGTCTGAAGCTGGGGAAGGCGGCTTTTCTGCACGTGGTGAAAAAAGGGAAGGC
TGATGGTGCCCCACAGCCACTGAGACCCGAACACTTCACGAAGGAATTCACACAACACAATGGG
GAGGACTTGGATGACGGCACTTGTAAAACTGAAGGGTTCCTTGTCAAAGAAGAGCAGAGAGATC
TCAGTGACTCTCAGGATGTGGCATTTGTCCAGCTCCATAAACCCAGGGACCCAGCTACTCTGCA
TGACGGAGAGAAGCACAGAGTGATTTCTGCTGCTCTCCTAGAGGACAGTGTTGGTGAGGTAGAC
GTGAATGAATGTGACCTGTCCATTGAGAAGCTCAACGAGACCATCAGTACACTGCAGCAGGCCA
TATTGAAGATCTCCCAGCAGCAAGAGCAGCTTCTCATGAAGTCCCCTACAGTGCCAACATCAGG
CACTAAAAACAACTGCCAGGACCAAAAAGTAAAGGCCCCAGTCCACTTTGTTGAGCCGCTCTCT
CCAACTGGGGTGCCTGGCCACCGCAAACCCCCACGGCTCGGCCAGGGCCGCAATTCCCGCTCAG
GAAGGCCAGCTGAACTGAAGGTTCCAAAAGACAGGCAGCAGGGTTGTTCTCGGAGCAAAACACC
AACACCCAGTGTGGAGACACTCCCACATTCAAGGTCTTTACCCCCAAGCACCCATCCACGGTCA
CCCTTGGACCCAGGTGGGGAACTCCCTGAGAAGTGTCTCTTTGACAGTTACAGGCTCCATGATG
AGAGTAACCATCGGACATTTGGTCTGTCCTCTTGTAAAGATGCCAACATCGTATCAGAACAGAT
GAACTTTAAAGAGGGTCTGGATACAAGTGTCCAAGAGGCAGAGCTGAGCTCCTCTGCCATCACA
GGGAAAGAGCATACTCCCATGGAGGAGCCGCTGAGGAGCAAGGCCAGCCTCATTGAGGTGGACC
TCTCTGACCTGAAGGCCCCTGATGAGGATGGAGAGGTGGTTGGACATGAGAGCTCGCTGGAGCT
TGGTGGAGAGAGTGACCAGAAGCCTGGGGTTGGCTTCTTCTTCAAGGATGAACAGAAAGCAGAG
GATGAGCTTGCTAAGAAGCGGGCAGCCTTCCTTCTGAAACAGCAGCGCAAGGCTGAAGAGGCTC
GTGCACGCAAGCAGCAGCTGGAGGCGGAAGTGGAGCTCAAGCGAGATGAAGCCCGGCGTAAGGC
CGAAGAGGACCGATTACGGAAGGAGGAGGAGAAGGCGAGGCGAGAGCTCATTAAACAGGAGTAC
TTGCGGAGGAAGCAGCAGCAAGCCTTGGAGGAGCAAGGGCTTGGCAAACCTAAATCAAAGCCTA
AAAAGCCTCGGCCAAAGTCAGTTCACCGGGAGGAGTCTTGCAGCGACTCTGGCACCAAGTGCTC
TTCTACCCCAGATAACTTGAGCCAGACTCACTCTGGCTCTAGCCTGTCCTTGGCATCTGCAGCA
ACGACAGAACCTGAAAGTGTTCACTCGGGGGGCACACCTTCTCACCGAGTTGAATCACTGGAAG
CCTTACCTATCCTGAGTCGCAACCCCAGTCGGAGCACAGACCGAGACTGGGAGACTGCATCGGC
AGCTTCCTCTTTGGCCTCTGTGGCCGAGTACACAGGTCCTAAACTGTTTAAGGAGCCCAGTAGC
AAATCAAACAAACCAATTATTCACAACGCCATCTCCCACTGCTGTCTGGCTGGAAAAGTGAATG
AACCTCACAAGAATTCAATATTGGAGGAGCTGGAGAAGTGTGACGCCAACCACTATATCATCCT
GTTCCGAGACGCCGGCTGCCAGTTCAGGGCTCTTTACTGCTACCAGCCCGACACTGAAGAGATC
TACAAACTCACTGGCACGGGGCCCAAGAGCATCACCAAGAAGATGATTGACAAACTGTATAAAT
ACAGCTCAGACCGGAAGCAGTTTAACCTGATCCCAGCCAAGACCATGTCTGTCAGCGTGGATGC
ACTCACGATCCATAACCACTTGTGGCAGCCCAAGCGGCCCACAGTGCCAAAGAAGACCCAGACT
CGTAAGTGACCACGGCAGGCAGGACCCTGAGCGGATGTGCTGACGGGATCCCTATTTATTATTT
TCATGCATTTGGTACGAAGCGTGGCGGGCCTCGGACAGTTCCCTACAGAGGTTCTTAGAGAACA
GGAGATCCTCTCCCCCTGCACACACGGACGGATGCGTCTACAGGACTGACCTGTGCTCTCATGG
GCATGGCTGCTGTGACCCTGCTGACCACTGAGGTCCTCACAATAAGGGACACCATGGAGTGAGT
GAGATCCTGGGCTGTGGCCCCCTCACTTGAAGTCCGTCAGGATAAGTTAAATGTGATCTGCGCT
CTGGCCTCCCTTCACCCCGTGCACATTGCCCGACGCCCCCTGCTGGCAGCTGTAATCATGCGCG
GTTATAGGGCCGAGGCTCGTTCGGGTCAGGGTGTGTGAATGTCTTCATAAAAGGAGTTCGTATG
GGAAATGTTTTTCACTTTAGAAATTGTATGATATTTATTGACTGTGTCTACTGCCAACCTTTAT
ATCCAGTTCTAAGATTTCTGAAAAAAACAAAACAAAACAAAAAAAACCTGTTCCTTGCTGCTCA
GAAAAAGTTTACTGAAAAATGTCAGTTCACTAAAAGCACTGAAATCAGCAAAGTTTGTCTTCTG
CTAAAATGACGTTTACATATTTGGAGTGAGTATTTCTGCCACACAGTCGGGAGGGTTGTGGGGT
GCTGCTAGCTGATGCTGACTTCATTGGGAGCAGACAGCTAAGCCGACGTTAGCCACCACCGGTT
AGGTCTGAGGTATGTGCTGGTGTATTCACTTTCATAAAGGCAGACTTTGGTATAGTAGCGACTT
TCCACCCTTGGCTGCCAGTTCCTTCGTGGTGTTATGGTGGCCTGGCTGGCTACCATAGCTGTTG
CTTCTGGAAGAACGCATGCTCGGTGCGGTGTGCAGTCTCAGGTGAGGTTGGTGATTCTGCTTTT
TGCCTCCTTTAAAACTTGGTGGTTATTTGCAATTATTTCAGAATGGCGTAGCTGCTTCAGGTCT
CTTCCCCCTGGTCCCTGTGGTGGCTGATTGCCTCAGAACAGTTCCTGGGGAGCAGGGGCGCCCC
AGCGATGGGTCAGCAGAGTGAAAGAAGACCCTGGAGCCACTCGTAGTTTTGCACATTTCTTTTT
GAGAGTGTTACTTGAATCTGTCCCAACCACAGGAGAGCATTGAAGATAACAGAGGGGACTCAGA
TGTCCACGGCTTAGCCCACCCCGGCAGTGTCAGGTAGATAGCAAAGGAGCATGGGGCAGAAATG
CTGGAGGGGTGAGCTGAGGTCTTGTCTTCTCCTTTGTGACTGTGTATCCAGTCGGGTGGCGCTG
TGCTGTGTGAGCATTAAAGTCTGTGACTACCTGTCACCAGCTGCCCCGTGTCTTCATTTCTCAC
TGTGCACTTGATGTTACCATATTTATTTTAAGAGAGCACTAAAATGTAATAAAGTAATGAGCTG
GCTTTCTGTTAA

hide sequence

RefSeq Acc Id:

XM_039104722 ⟹ XP_038960650

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	29,144,318 - 29,206,380 (-)	NCBI
mRatBN7.2	3	8,746,176 - 8,805,966 (-)	NCBI

RefSeq Acc Id:

XM_039104723 ⟹ XP_038960651

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	29,144,318 - 29,183,801 (-)	NCBI
mRatBN7.2	3	8,746,176 - 8,785,668 (-)	NCBI

RefSeq Acc Id:

XM_063283467 ⟹ XP_063139537

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	29,144,318 - 29,206,381 (-)	NCBI

Protein Sequences


Protein RefSeqs	NP_001162021	(Get FASTA)	NCBI Sequence Viewer
	NP_001402616	(Get FASTA)	NCBI Sequence Viewer
	XP_006233734	(Get FASTA)	NCBI Sequence Viewer
	XP_006233736	(Get FASTA)	NCBI Sequence Viewer
	XP_006233737	(Get FASTA)	NCBI Sequence Viewer
	XP_038960650	(Get FASTA)	NCBI Sequence Viewer
	XP_038960651	(Get FASTA)	NCBI Sequence Viewer
	XP_063139537	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	D3Z8E6	(Get FASTA)	NCBI Sequence Viewer
	EDL93530	(Get FASTA)	NCBI Sequence Viewer
	EDL93531	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000024163.6
	ENSRNOP00000073547.2
	ENSRNOP00000081912.1
	ENSRNOP00000088653.1

RefSeq Acc Id:	NP_001162021 ⟸ NM_001168549
- Peptide Label:	isoform 1
- UniProtKB:	D3Z8E6 (UniProtKB/Swiss-Prot), A0A0G2K5T1 (UniProtKB/TrEMBL)
- Sequence:	show sequence MVDAGGRSAAEGWRRMEAPPEGADLVPLDRYDAARAKIAANLQWICAKAYGLDNIPEDLRDPFY IDQYEQEHIKPPVIKLLLSSELYCRVCSLILKGDQAATLQGHQSVIQALSRKGIYVMESDDTPV TDADLSQAPIKMSGHMAMVDALMMAYTVEMISIEKVVASVKRFSTFSASKELPYDLEDAMVFWI NKVNLKMREITEKEVKLKQQPLESPAHQKPGLEHAVMHCMLEPVDFARVVRYRREHLSARQSPY FPLLEDLMRDGSDGAALLAVVHYYCPEQMKLDDICLKEVPSMADSLYNIRLLREFSNEHLNKCF YLTLEDMLYAPLVLKPNVMVFIAELFWWFENVKPDFVQPRDIQELKDAKTVLQQKSSRPPVPIS NATKRSFLGSPAAMSPADLPPSTQPLTEGSHRYHLHSEEPECLGKGASTFSPSHPLLPLRQKQQ KVSQAEEIPDQRHRSNSLTRADGQPRGAAIAWPDKKNRPVSQPTSFALHHAASCDVDPSSGDSI SLARSISKDSLASNIIHLTPQNQPHPSAGKTNGKSLLSNVNIEDDEEEELVAIIRTDVSPHSPE IPRTSPQAPGLVASIRSPQRQADTLESKPDSFYLEPLMPAVLRPAKEKQIITKEDERGEGRPRT IMAKRPSEGSQPLVRKKVTGSHGSRDLNRTFTPIPCSEFAASIDPTEVGPQSTEATGEGQPLAL GRFDPVPQGQVADGFFLHVGRAEEDEGRWYVGSQSPSSHDSEPWTILRQDSDSDVVDVEDAEQD FIGEDHPVVIPRYAGEEESAKLQEDMKVKEHEDKDDASGRSSPCLSTTSQLSSMSMASGSVKMT SFAERKLQRLNSCETKSSTSSSQKTTPDASESCPAPLTTWRQKREQSPSRHSKDPASLLASELV QLHMQLEEKRRAIEAQKKKMEALSARQRLKLGKAAFLHVVKKGKADGAPQPLRPEHFTKEFTQH NGEDLDDGTCKTEGFLVKEEQRDLSDSQDVAFVQLHKPRDPATLHDGEKHRVISAALLEDSVGE VDVNECDLSIEKLNETISTLQQAILKISQQQEQLLMKSPTVPTSGTKNNCQDQKVKAPVHFVEP LSPTGVPGHRKPPRLGQGRNSRSGRPAELKVPKDRQQGCSRSKTPTPSVETLPHSRSLPPSTHP RSPLDPGGELPEKCLFDSYRLHDESNHRTFGLSSCKDANIVSEQMNFKEGLDTSVQEAELSSSA ITGKEHTPMEEPLRSKASLIEVDLSDLKAPDEDGEVVGHESSLELGGESDQKPGVGFFFKDEQK AEDELAKKRAAFLLKQQRKAEEARARKQQLEAEVELKRDEARRKAEEDRLRKEEEKARRELIKQ EYLRRKQQQALEEQGLGKPKSKPKKPRPKSVHREESCSDSGTKCSSTPDNLSQTHSGSSLSLAS AATTEPESVHSGGTPSHRVESLEALPILSRNPSRSTDRDWETASAASSLASVAEYTGPKLFKEP SSKSNKPIIHNAISHCCLAGKVNEPHKNSILEELEKCDANHYIILFRDAGCQFRALYCYQPDTE EIYKLTGTGPKSITKKMIDKLYKYSSDRKQFNLIPAKTMSVSVDALTIHNHLWQPKRPTVPKKT QTRK hide sequence

RefSeq Acc Id:	XP_006233737 ⟸ XM_006233675
- Peptide Label:	isoform X1
- UniProtKB:	A0A8I6GHB0 (UniProtKB/TrEMBL), A0A0G2K5T1 (UniProtKB/TrEMBL)
- Sequence:	show sequence MVDAGGRSAAEGWRRMEAPPEGADLVPLDRYDAARAKIAANLQWICAKAYGLDNIPEDLRDPFY IDQYEQEHIKPPVIKLLLSSELYCRVCSLILKGDQAATLQGHQSVIQALSRKGIYVMESDDTPV TDADLSQAPIKMSGHMAMVDALMMAYTVEMISIEKVVASVKRFSTFSASKELPYDLEDAMVFWI NKVNLKMREITEKEVKLKQQPLESPAHQKSPSKWYWKLVPVRYRREHLSARQSPYFPLLEDLMR DGSDGAALLAVVHYYCPEQMKLDDICLKEVPSMADSLYNIRLLREFSNEHLNKCFYLTLEDMLY APLVLKPNVMVFIAELFWWFENVKPDFVQPRDIQELKDAKTVLQQKSSRPPVPISNATKRSFLG SPAAMSPADLPPSTQPLTEGSHRYHLHSEEPECLGKGASTFSPSHPLLPLRQKQQKVSQAEEIP DQRHRSNSLTRADGQPRGAAIAWPDKKNRPVSQPTSFALHHAASCDVDPSSGDSISLARSISKD SLASNIIHLTPQNQPHPSAGKTNGKSLLSNVNIEDDEEEELVAIIRTDVSPHSPEIPRTSPQAP GLVASIRSPQRQADTLESKPDSFYLEPLMPAVLRPAKEKQIITKEDERGEGRPRTIMAKRPSEG SQPLVRKKVTGSHGSRDLNRTFTPIPCSEFAASIDPTEVGPQSTEATGEGQPLALGRFDPVPQG QVADGFFLHVGRAEEDEGRWYVGSQSPSSHDSEPWTILRQDSDSDVVDVEDAEQDFIGEDHPVV IPRYAGEEESAKLQEDMKVKEHEDKDDASGRSSPCLSTTSQLSSMSMASGSVKMTSFAERKLQR LNSCETKSSTSSSQKTTPDASESCPAPLTTWRQKREQSPSRHSKDPASLLASELVQLHMQLEEK RRAIEAQKKKMEALSARQRLKLGKAAFLHVVKKGKADGAPQPLRPEHFTKEFTQHNGEDLDDGT CKTEGFLVKEEQRDLSDSQDVAFVQLHKPRDPATLHDGEKHRVISAALLEDSVGEVDVNECDLS IEKLNETISTLQQAILKISQQQEQLLMKSPTVPTSGTKNNCQDQKVKAPVHFVEPLSPTGVPGH RKPPRLGQGRNSRSGRPAELKVPKDRQQGCSRSKTPTPSVETLPHSRSLPPSTHPRSPLDPGGE LPEKCLFDSYRLHDESNHRTFGLSSCKDANIVSEQMNFKEGLDTSVQEAELSSSAITGKEHTPM EEPLRSKASLIEVDLSDLKAPDEDGEVVGHESSLELGGESDQKPGVGFFFKDEQKAEDELAKKR AAFLLKQQRKAEEARARKQQLEAEVELKRDEARRKAEEDRLRKEEEKARRELIKQEYLRRKQQQ ALEEQGLGKPKSKPKKPRPKSVHREESCSDSGTKCSSTPDNLSQTHSGSSLSLASAATTEPESV HSGGTPSHRVESLEALPILSRNPSRSTDRDWETASAASSLASVAEYTGPKLFKEPSSKSNKPII HNAISHCCLAGKVNEPHKNSILEELEKCDANHYIILFRDAGCQFRALYCYQPDTEEIYKLTGTG PKSITKKMIDKLYKYSSDRKQFNLIPAKTMSVSVDALTIHNHLWQPKRPTVPKKTQTRK hide sequence

RefSeq Acc Id:	XP_006233736 ⟸ XM_006233674
- Peptide Label:	isoform X4
- UniProtKB:	A0A0G2K5T1 (UniProtKB/TrEMBL)
- Sequence:	show sequence MVDAGGRSAAEGWRRMEAPPEGADLVPLDRYDAARAKIAANLQWICAKAYGLDNIPEDLRDPFY IDQYEQEHIKPPVIKLLLSSELYCRVCSLILKGDQAATLQGHQSVIQALSRKGIYVMESDDTPV TDADLSQAPIKMSGHMAMVDALMMAYTVEMISIEKVVASVKRFSTFSASKELPYDLEDAMVFWI NKVNLKMREITEKEVKLKQQPLESPAHQKVRYRREHLSARQSPYFPLLEDLMRDGSDGAALLAV VHYYCPEQMKLDDICLKEVPSMADSLYNIRLLREFSNEHLNKCFYLTLEDMLYAPLVLKPNVMV FIAELFWWFENVKPDFVQPRDIQELKDAKTVLQQKSSRPPVPISNATKRSFLGSPAAMSPADLP PSTQPLTEGSHRYHLHSEEPECLGKGASTFSPSHPLLPLRQKQQKVSQAEEIPDQRHRSNSLTR ADGQPRGAAIAWPDKKNRPVSQPTSFALHHAASCDVDPSSGDSISLARSISKDSLASNIIHLTP QNQPHPSAGKTNGKSLLSNVNIEDDEEEELVAIIRTDVSPHSPEIPRTSPQAPGLVASIRSPQR QADTLESKPDSFYLEPLMPAVLRPAKEKQIITKEDERGEGRPRTIMAKRPSEGSQPLVRKKVTG SHGSRDLNRTFTPIPCSEFAASIDPTEVGPQSTEATGEGQPLALGRFDPVPQGQVADGFFLHVG RAEEDEGRWYVGSQSPSSHDSEPWTILRQDSDSDVVDVEDAEQDFIGEDHPVVIPRYAGEEESA KLQEDMKVKEHEDKDDASGRSSPCLSTTSQLSSMSMASGSVKMTSFAERKLQRLNSCETKSSTS SSQKTTPDASESCPAPLTTWRQKREQSPSRHSKDPASLLASELVQLHMQLEEKRRAIEAQKKKM EALSARQRLKLGKAAFLHVVKKGKADGAPQPLRPEHFTKEFTQHNGEDLDDGTCKTEGFLVKEE QRDLSDSQDVAFVQLHKPRDPATLHDGEKHRVISAALLEDSVGEVDVNECDLSIEKLNETISTL QQAILKISQQQEQLLMKSPTVPTSGTKNNCQDQKVKAPVHFVEPLSPTGVPGHRKPPRLGQGRN SRSGRPAELKVPKDRQQGCSRSKTPTPSVETLPHSRSLPPSTHPRSPLDPGGELPEKCLFDSYR LHDESNHRTFGLSSCKDANIVSEQMNFKEGLDTSVQEAELSSSAITGKEHTPMEEPLRSKASLI EVDLSDLKAPDEDGEVVGHESSLELGGESDQKPGVGFFFKDEQKAEDELAKKRAAFLLKQQRKA EEARARKQQLEAEVELKRDEARRKAEEDRLRKEEEKARRELIKQEYLRRKQQQALEEQGLGKPK SKPKKPRPKSVHREESCSDSGTKCSSTHNLSQTHSGSSLSLASAATTEPESVHSGGTPSHRVES LEALPILSRNPSRSTDRDWETASAASSLASVAEYTGPKLFKEPSSKSNKPIIHNAISHCCLAGK VNEPHKNSILEELEKCDANHYIILFRDAGCQFRALYCYQPDTEEIYKLTGTGPKSITKKMIDKL YKYSSDRKQFNLIPAKTMSVSVDALTIHNHLWQPKRPTVPKKTQTRK hide sequence

RefSeq Acc Id:	XP_006233734 ⟸ XM_006233672
- Peptide Label:	isoform X2
- UniProtKB:	A0A0G2K5T1 (UniProtKB/TrEMBL)
- Sequence:	show sequence MVDAGGRSAAEGWRRMEAPPEGADLVPLDRYDAARAKIAANLQWICAKAYGLDNIPEDLRDPFY IDQYEQEHIKPPVIKLLLSSELYCRVCSLILKGDQAATLQGHQSVIQALSRKGIYVMESDDTPV TDADLSQAPIKMSGHMAMVDALMMAYTVEMISIEKVVASVKRFSTFSASKELPYDLEDAMVFWI NKVNLKMREITEKEVKLKQQPLESPAHQKSPSKWYWKLVPVRYRREHLSARQSPYFPLLEDLMR DGSDGAALLAVVHYYCPEQMKLDDICLKEVPSMADSLYNIRLLREFSNEHLNKCFYLTLEDMLY APLVLKPNVMVFIAELFWWFENVKPDFVQPRDIQELKDAKTVLQQKSSRPPVPISNATKRSFLG SPAAMSPADLPPSTQPLTEGSHRYHLHSEEPECLGKGASTFSPSHPLLPLRQKQQKVSQAEEIP DQRHRSNSLTRADGQPRGAAIAWPDKKNRPVSQPTSFALHHAASCDVDPSSGDSISLARSISKD SLASNIIHLTPQNQPHPSAGKTNGKSLLSNVNIEDDEEEELVAIIRTDVSPHSPEIPRTSPQAP GLVASIRSPQRQADTLESKPDSFYLEPLMPAVLRPAKEKQIITKEDERGEGRPRTIMAKRPSEG SQPLVRKKVTGSHGSRDLNRTFTPIPCSEFAASIDPTEVGPQSTEATGEGQPLALGRFDPVPQG QVADGFFLHVGRAEEDEGRWYVGSQSPSSHDSEPWTILRQDSDSDVVDVEDAEQDFIGEDHPVV IPRYAGEEESAKLQEDMKVKEHEDKDDASGRSSPCLSTTSQLSSMSMASGSVKMTSFAERKLQR LNSCETKSSTSSSQKTTPDASESCPAPLTTWRQKREQSPSRHSKDPASLLASELVQLHMQLEEK RRAIEAQKKKMEALSARQRLKLGKAAFLHVVKKGKADGAPQPLRPEHFTKEFTQHNGEDLDDGT CKTEGFLVKEEQRDLSDSQDVAFVQLHKPRDPATLHDGEKHRVISAALLEDSVGEVDVNECDLS IEKLNETISTLQQAILKISQQQEQLLMKSPTVPTSGTKNNCQDQKVKAPVHFVEPLSPTGVPGH RKPPRLGQGRNSRSGRPAELKVPKDRQQGCSRSKTPTPSVETLPHSRSLPPSTHPRSPLDPGGE LPEKCLFDSYRLHDESNHRTFGLSSCKDANIVSEQMNFKEGLDTSVQEAELSSSAITGKEHTPM EEPLRSKASLIEVDLSDLKAPDEDGEVVGHESSLELGGESDQKPGVGFFFKDEQKAEDELAKKR AAFLLKQQRKAEEARARKQQLEAEVELKRDEARRKAEEDRLRKEEEKARRELIKQEYLRRKQQQ ALEEQGLGKPKSKPKKPRPKSVHREESCSDSGTKCSSTHNLSQTHSGSSLSLASAATTEPESVH SGGTPSHRVESLEALPILSRNPSRSTDRDWETASAASSLASVAEYTGPKLFKEPSSKSNKPIIH NAISHCCLAGKVNEPHKNSILEELEKCDANHYIILFRDAGCQFRALYCYQPDTEEIYKLTGTGP KSITKKMIDKLYKYSSDRKQFNLIPAKTMSVSVDALTIHNHLWQPKRPTVPKKTQTRK hide sequence

Ensembl Acc Id:

ENSRNOP00000024163 ⟸ ENSRNOT00000024163

Ensembl Acc Id:

ENSRNOP00000073547 ⟸ ENSRNOT00000078020

RefSeq Acc Id:	XP_038960650 ⟸ XM_039104722
- Peptide Label:	isoform X5
- UniProtKB:	A0A0G2K5T1 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038960651 ⟸ XM_039104723
- Peptide Label:	isoform X6
- UniProtKB:	A0A0G2K5T1 (UniProtKB/TrEMBL)

Ensembl Acc Id:

ENSRNOP00000081912 ⟸ ENSRNOT00000099628

Ensembl Acc Id:

ENSRNOP00000088653 ⟸ ENSRNOT00000101799

RefSeq Acc Id:	NP_001402616 ⟸ NM_001415687
- Peptide Label:	isoform 2
- UniProtKB:	A0A8I5ZW13 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063139537 ⟸ XM_063283467
- Peptide Label:	isoform X3
- UniProtKB:	A0A8I5ZW13 (UniProtKB/TrEMBL)

Protein Domains

Calponin-homology (CH) CKK

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-D3Z8E6-F1-model_v2	AlphaFold	D3Z8E6	1-1604	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Promoters

RGD ID:

13691894

Promoter ID:

EPDNEW_R2419

Type:

initiation region

Name:

Camsap1_1

Description:

calmodulin regulated spectrin-associated protein 1

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0	3	3,434,000 - 3,434,060	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1565022	AgrOrtholog
BioCyc Gene	G2FUF-50408	BioCyc
Ensembl Genes	ENSRNOG00000017883	Ensembl, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript	ENSRNOT00000024163.8	UniProtKB/Swiss-Prot
	ENSRNOT00000078020.2	UniProtKB/TrEMBL
	ENSRNOT00000099628.1	UniProtKB/TrEMBL
	ENSRNOT00000101799.1	UniProtKB/TrEMBL
Gene3D-CATH	3.10.20.360	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro	CAMSAP	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	CAMSAP_CC1	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	CAMSAP_CH	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	CH-domain	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	CH_dom_sf	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	CKK_dom_sf	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	CKK_domain	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	PRC_barrel-like_sf	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report	rno:296580	UniProtKB/Swiss-Prot
NCBI Gene	296580	ENTREZGENE
PANTHER	CALMODULIN-REGULATED SPECTRIN-ASSOCIATED PROTEIN 1	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	PTHR21595	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam	CAMSAP_CC1	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	CAMSAP_CH	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	CAMSAP_CKK	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen	Camsap1	PhenoGen
PROSITE	CKK	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	PS50021	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
RatGTEx	ENSRNOG00000017883	RatGTEx
SMART	CAMSAP_CKK	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP	SSF47576	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	SSF50346	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt	A0A0G2K5T1	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I5ZW13	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I6GHB0	ENTREZGENE, UniProtKB/TrEMBL
	CAMP1_RAT	UniProtKB/Swiss-Prot, ENTREZGENE

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2008-03-07	Camsap1	calmodulin regulated spectrin-associated protein 1	RGD1565022_predicted	similar to calmodulin regulated spectrin-associated protein 1 (predicted)	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2006-03-07	RGD1565022_predicted	similar to calmodulin regulated spectrin-associated protein 1 (predicted)	LOC296580	similar to calmodulin regulated spectrin-associated protein 1	Symbol and Name status set to approved	1299863	APPROVED
2006-02-09	LOC296580	similar to calmodulin regulated spectrin-associated protein 1			Symbol and Name status set to provisional	70820	PROVISIONAL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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