Fam181b (family with sequence similarity 181, member B) - Rat Genome Database

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Gene: Fam181b (family with sequence similarity 181, member B) Rattus norvegicus
Analyze
Symbol: Fam181b
Name: family with sequence similarity 181, member B
RGD ID: 1564695
Description: Orthologous to human FAM181B (family with sequence similarity 181 member B); INTERACTS WITH 2,2',4,4'-Tetrabromodiphenyl ether; 2,3,7,8-tetrachlorodibenzodioxine; 6-propyl-2-thiouracil.
Type: protein-coding
RefSeq Status: PROVISIONAL
Previously known as: hypothetical protein LOC499205; LOC499205; RGD1564695; similar to A830059I20Rik protein; uncharacterized protein LOC499205
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: mRatBN7.2 - mRatBN7.2 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81156,578,821 - 156,580,318 (+)NCBIGRCr8
mRatBN7.21147,166,428 - 147,167,925 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1147,149,447 - 147,168,298 (-)EnsemblmRatBN7.2 Ensembl
mRatBN7.2 Ensembl1147,124,740 - 147,168,298 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1155,118,556 - 155,120,053 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01162,298,738 - 162,300,235 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01155,172,213 - 155,173,710 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01157,920,786 - 157,922,283 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1157,920,786 - 157,922,274 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01164,164,156 - 164,165,653 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41149,955,641 - 149,957,138 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera1145,344,573 - 145,346,070 (+)NCBICelera
Cytogenetic Map1q32NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

References - curated
# Reference Title Reference Citation
1. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:12477932  


Genomics

Comparative Map Data
Fam181b
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81156,578,821 - 156,580,318 (+)NCBIGRCr8
mRatBN7.21147,166,428 - 147,167,925 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1147,149,447 - 147,168,298 (-)EnsemblmRatBN7.2 Ensembl
mRatBN7.2 Ensembl1147,124,740 - 147,168,298 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1155,118,556 - 155,120,053 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01162,298,738 - 162,300,235 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01155,172,213 - 155,173,710 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01157,920,786 - 157,922,283 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1157,920,786 - 157,922,274 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01164,164,156 - 164,165,653 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41149,955,641 - 149,957,138 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera1145,344,573 - 145,346,070 (+)NCBICelera
Cytogenetic Map1q32NCBI
FAM181B
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381182,729,940 - 82,733,864 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1182,729,940 - 82,733,864 (-)EnsemblGRCh38hg38GRCh38
GRCh371182,440,982 - 82,444,906 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361182,120,694 - 82,122,554 (-)NCBINCBI36Build 36hg18NCBI36
Celera1179,752,906 - 79,754,766 (-)NCBICelera
Cytogenetic Map11q14.1NCBI
HuRef1178,740,310 - 78,742,170 (-)NCBIHuRef
CHM1_11182,327,034 - 82,328,894 (-)NCBICHM1_1
T2T-CHM13v2.01182,666,398 - 82,670,322 (-)NCBIT2T-CHM13v2.0
Fam181b
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39792,729,087 - 92,730,929 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl792,729,073 - 92,731,074 (+)EnsemblGRCm39 Ensembl
GRCm38793,079,879 - 93,081,722 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl793,079,865 - 93,081,867 (+)EnsemblGRCm38mm10GRCm38
MGSCv377100,228,389 - 100,230,232 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36792,955,111 - 92,956,914 (+)NCBIMGSCv36mm8
Celera790,359,125 - 90,360,963 (+)NCBICelera
Cytogenetic Map7E1NCBI
cM Map751.66NCBI
Fam181b
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0NW_0049554149,798,441 - 9,800,232 (+)NCBIChiLan1.0ChiLan1.0
FAM181B
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2983,662,436 - 83,668,793 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11184,713,661 - 84,717,591 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01177,796,801 - 77,800,010 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11181,409,866 - 81,415,350 (-)NCBIpanpan1.1PanPan1.1panPan2
FAM181B
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12116,355,669 - 16,357,654 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2116,355,847 - 16,357,249 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2116,233,421 - 16,235,033 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.02116,544,371 - 16,546,114 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2116,544,418 - 16,545,719 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12116,318,794 - 16,320,537 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02116,399,404 - 16,401,145 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02116,469,287 - 16,471,030 (+)NCBIUU_Cfam_GSD_1.0
FAM181B
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl916,921,724 - 16,923,001 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1916,921,290 - 16,923,142 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2918,783,549 - 18,785,401 (-)NCBISscrofa10.2Sscrofa10.2susScr3
FAM181B
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1173,924,794 - 73,927,035 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl173,925,227 - 73,926,507 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366604351,780,802 - 51,782,973 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Fam181b
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248457,174,693 - 7,175,949 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046248457,174,243 - 7,176,186 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Fam181b
6 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:89
Count of miRNA genes:78
Interacting mature miRNAs:82
Transcripts:ENSRNOT00000014284
Prediction methods:Microtar, Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
70225Bp58Blood pressure QTL 583.3arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)132356093162846471Rat
10059597Bp377Blood pressure QTL 3773.420.025arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)132737458199368955Rat
1578654Bss10Bone structure and strength QTL 104femur morphology trait (VT:0000559)femoral neck cortical cross-sectional area (CMO:0001702)149393172159356837Rat
634314Niddm44Non-insulin dependent diabetes mellitus QTL 44blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)149393289199050459Rat
2298545Neuinf8Neuroinflammation QTL 84.6nervous system integrity trait (VT:0010566)spinal cord beta-2 microglobulin mRNA level (CMO:0002125)157336763151090257Rat
1578780Cm52Cardiac mass QTL 523.30.0001heart mass (VT:0007028)heart wet weight (CMO:0000069)181591954219808434Rat
724529Cm16Cardiac mass QTL 162.7heart mass (VT:0007028)calculated heart weight (CMO:0000073)187580395150700247Rat
724521Uae1Urinary albumin excretion QTL 13.80.0001urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)190508614173018436Rat
1358902Bw47Body weight QTL 471.67body mass (VT:0001259)body weight (CMO:0000012)190508614180359386Rat
1331793Bp200Blood pressure QTL 2003.71601arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)194494440172949803Rat
1331751Bp199Blood pressure QTL 1993.60022arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)194494440181830018Rat
1331749Hrtrt11Heart rate QTL 112.973heart pumping trait (VT:2000009)heart rate (CMO:0000002)194494440198211706Rat
70209Niddm23Non-insulin dependent diabetes mellitus QTL 232.82blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)194494440198324465Rat
731168Bp154Blood pressure QTL 1543.4arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)194642644214537671Rat
8655649Arrd1Age-related retinal degeneration QTL 14.89retinal layer morphology trait (VT:0003727)percentage of study population developing retinopathy during a period of time (CMO:0002453)1100357752183970443Rat
2303591Gluco41Glucose level QTL 412blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)1102168504147168504Rat
61370Mcs3Mammary carcinoma susceptibility QTL 32.15mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)1102268556147268556Rat
1354623Rf46Renal function QTL 463.8blood creatinine amount (VT:0005328)plasma creatinine level (CMO:0000537)1102813953151162766Rat
1354591Cm36Cardiac mass QTL 364.1heart left ventricle mass (VT:0007031)calculated heart weight (CMO:0000073)1102813953201278233Rat
1354615Cm32Cardiac mass QTL 325.2heart left ventricle mass (VT:0007031)heart left ventricle wet weight (CMO:0000071)1102813953201278233Rat
1354606Bp246Blood pressure QTL 2463.6arterial blood pressure trait (VT:2000000)pulse pressure (CMO:0000292)1102813953218753816Rat
9590300Scort16Serum corticosterone level QTL 164.390.001blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)1103111621148111621Rat
8694370Bw154Body weight QTL 1548.910.001body lean mass (VT:0010483)lean tissue morphological measurement (CMO:0002184)1103111621148111621Rat
631496Bp97Blood pressure QTL 973.08arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)1106047847151047847Rat
1300158Bp173Blood pressure QTL 1733.48arterial blood pressure trait (VT:2000000)blood pressure time series experimental set point of the baroreceptor response (CMO:0002593)1115540693185145286Rat
7794788Mcs32Mammary carcinoma susceptibility QTL 322.61mammary gland integrity trait (VT:0010552)mammary tumor incidence/prevalence measurement (CMO:0000946)1115540693238914717Rat
631199Cm23Cardiac mass QTL 234.60.0004heart left ventricle mass (VT:0007031)heart left ventricle wet weight (CMO:0000071)1115585465172949803Rat
7421630Bp362Blood pressure QTL 3620.001arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)1118608292241799120Rat
2313060Bss71Bone structure and strength QTL 712.60.0001long bone metaphysis morphology trait (VT:0000133)tibia midshaft total cross-sectional area (CMO:0001715)1118944747163944747Rat
631205Bp196Blood pressure QTL 19640.0001arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)1118944897199050459Rat
1598850Bp297Blood pressure QTL 2972.1arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)1121006655166006655Rat
1598866Bp287Blood pressure QTL 2875.1arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)1121006655166006655Rat
61442Strs1Sensitivity to stroke QTL 17.4cerebrum integrity trait (VT:0010549)post-insult time to onset of cerebrovascular lesion (CMO:0002343)1121767634166767634Rat
2293140Bp313Blood pressure QTL 313arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)1121833674166833674Rat
631544Bp84Blood pressure QTL 845.6arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)1123350408181759564Rat
1358189Cstrr1Cold stress response QTL 10.0001catecholamine amount (VT:0010543)urine norepinephrine level (CMO:0001629)1123350408182418476Rat
1641895Bp298Blood pressure QTL 298arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)1123350408182418476Rat
1578770Stresp23Stress response QTL 23kidney sympathetic nerve activity (VT:0004050)stimulated renal sympathetic nerve activity to basal renal sympathetic nerve activity ratio (CMO:0001786)1123350408182418476Rat
631549Bp89Blood pressure QTL 895.7arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)1123350581201284552Rat
634348Bp138Blood pressure QTL 138arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)1125611501168883176Rat
9685799Bp375Blood pressure QTL 375arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)1125611501170611501Rat
631654Bp107Blood pressure QTL 107arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)1125611501170611501Rat
9685802Bp376Blood pressure QTL 376arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)1126540680171540680Rat
738006Anxrr14Anxiety related response QTL 1440.00035locomotor behavior trait (VT:0001392)amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)1130636910175636910Rat
738028Anxrr12Anxiety related response QTL 124.90.00001locomotor behavior trait (VT:0001392)amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)1130636910175636910Rat
631202Gluco13Glucose level QTL 130.0001blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)1131763437159756369Rat
6893347Bw98Body weight QTL 980.20.53body mass (VT:0001259)body weight (CMO:0000012)1133680936178680936Rat
6893361Bw104Body weight QTL 1040.590.27body mass (VT:0001259)body weight (CMO:0000012)1133680936178680936Rat
1558645Bw55Body weight QTL 553.20.004body mass (VT:0001259)body weight (CMO:0000012)1133680936178680936Rat
631206Niddm40Non-insulin dependent diabetes mellitus QTL 40blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)1136745990163747690Rat
71118Thym1Thymus enlargement QTL 110.170.001thymus mass (VT:0004954)thymus weight to body weight ratio (CMO:0000612)1136829932181829932Rat
724550Thym3Thymus enlargement QTL 37.820.001thymus mass (VT:0004954)thymus weight to body weight ratio (CMO:0000612)1136829932181829932Rat
631519Pia11Pristane induced arthritis QTL 115.3joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)1136830018181830018Rat
1598853Memor3Memory QTL 34.5exploratory behavior trait (VT:0010471)total horizontal distance resulting from voluntary locomotion in an experimental apparatus (CMO:0001443)1143506580212458660Rat
61348Bp30Blood pressure QTL 302.4arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)1144017057197814409Rat
70160Bw18Body weight QTL 185.7body mass (VT:0001259)body weight (CMO:0000012)1144267353196383668Rat
737828Hcas3Hepatocarcinoma susceptibility QTL 34.9liver integrity trait (VT:0010547)liver tumorous lesion volume to total liver volume ratio (CMO:0001082)1144267353222987745Rat
2302378Insul11Insulin level QTL 113.25blood insulin amount (VT:0001560)serum insulin level (CMO:0000358)1144267353251128347Rat
634315Niddm45Non-insulin dependent diabetes mellitus QTL 457.16blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)1144267916172949660Rat
61379Bp44Blood pressure QTL 4419.2arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)1144267916174133260Rat

Markers in Region
BE106340  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21147,166,714 - 147,166,898 (+)MAPPERmRatBN7.2
Rnor_6.01157,921,073 - 157,921,256NCBIRnor6.0
Rnor_5.01164,164,443 - 164,164,626UniSTSRnor5.0
RGSC_v3.41149,955,928 - 149,956,111UniSTSRGSC3.4
Celera1145,344,860 - 145,345,043UniSTS
RH 3.4 Map11133.9UniSTS
Cytogenetic Map1q32UniSTS
UniSTS:235710  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21147,167,803 - 147,168,190 (+)MAPPERmRatBN7.2
Rnor_6.01157,922,162 - 157,922,548NCBIRnor6.0
Rnor_5.01164,165,532 - 164,165,918UniSTSRnor5.0
RGSC_v3.41149,957,017 - 149,957,403UniSTSRGSC3.4
Celera1145,345,949 - 145,346,335UniSTS
Cytogenetic Map1q32UniSTS


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system appendage
High
Medium 64 3
Low 34 13 6 7 6 10 20 36 1
Below cutoff 2 9 8 3 7 10 11 2 7 7

Sequence


RefSeq Acc Id: ENSRNOT00000014284   ⟹   ENSRNOP00000014284
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1147,149,447 - 147,168,298 (-)Ensembl
Rnor_6.0 Ensembl1157,920,786 - 157,922,274 (+)Ensembl
RefSeq Acc Id: ENSRNOT00000014369   ⟹   ENSRNOP00000078671
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1147,124,773 - 147,167,931 (+)Ensembl
RefSeq Acc Id: ENSRNOT00000094920   ⟹   ENSRNOP00000080388
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1147,156,588 - 147,168,298 (-)Ensembl
RefSeq Acc Id: ENSRNOT00000112886   ⟹   ENSRNOP00000094271
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1147,124,740 - 147,168,298 (+)Ensembl
RefSeq Acc Id: ENSRNOT00000116885   ⟹   ENSRNOP00000083845
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1147,124,740 - 147,168,298 (+)Ensembl
RefSeq Acc Id: NM_001109150   ⟹   NP_001102620
RefSeq Status: PROVISIONAL
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81156,578,821 - 156,580,318 (+)NCBI
mRatBN7.21147,166,428 - 147,167,925 (+)NCBI
Rnor_6.01157,920,786 - 157,922,283 (+)NCBI
Rnor_5.01164,164,156 - 164,165,653 (+)NCBI
RGSC_v3.41149,955,641 - 149,957,138 (+)RGD
Celera1145,344,573 - 145,346,070 (+)RGD
Sequence:
Protein Sequences
Protein RefSeqs NP_001102620 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAI58704 (Get FASTA)   NCBI Sequence Viewer  
  EDM18510 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSRNOP00000014284.5
  ENSRNOP00000078671.1
  ENSRNOP00000080388.1
  ENSRNOP00000083845.1
  ENSRNOP00000094271
  ENSRNOP00000094271.1
RefSeq Acc Id: NP_001102620   ⟸   NM_001109150
- UniProtKB: B0BN67 (UniProtKB/TrEMBL),   A6I670 (UniProtKB/TrEMBL),   A0A8I5ZNU9 (UniProtKB/TrEMBL),   A0A8I5ZXH0 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSRNOP00000014284   ⟸   ENSRNOT00000014284
RefSeq Acc Id: ENSRNOP00000078671   ⟸   ENSRNOT00000014369
RefSeq Acc Id: ENSRNOP00000083845   ⟸   ENSRNOT00000116885
RefSeq Acc Id: ENSRNOP00000080388   ⟸   ENSRNOT00000094920
RefSeq Acc Id: ENSRNOP00000094271   ⟸   ENSRNOT00000112886

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-B0BN67-F1-model_v2 AlphaFold B0BN67 1-419 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

Promoters
RGD ID:13690200
Promoter ID:EPDNEW_R725
Type:single initiation site
Name:Fam181b_1
Description:family with sequence similarity 181, member B
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.01157,920,803 - 157,920,863EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1564695 AgrOrtholog
BioCyc Gene G2FUF-58486 BioCyc
Ensembl Genes ENSRNOG00000010763 Ensembl, UniProtKB/TrEMBL
  ENSRNOG00000069065 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000014284.5 UniProtKB/TrEMBL
  ENSRNOT00000014369.7 UniProtKB/TrEMBL
  ENSRNOT00000094920.1 UniProtKB/TrEMBL
  ENSRNOT00000112886 ENTREZGENE
  ENSRNOT00000112886.1 UniProtKB/TrEMBL
  ENSRNOT00000116885.1 UniProtKB/TrEMBL
IMAGE_CLONE IMAGE:9029854 IMAGE-MGC_LOAD
InterPro FAM181 UniProtKB/TrEMBL
KEGG Report rno:499205 UniProtKB/TrEMBL
MGC_CLONE MGC:187788 IMAGE-MGC_LOAD
NCBI Gene 499205 ENTREZGENE
PANTHER PROTEIN FAM181B UniProtKB/TrEMBL
  PTHR33766 UniProtKB/TrEMBL
Pfam FAM181 UniProtKB/TrEMBL
PhenoGen Fam181b PhenoGen
RatGTEx ENSRNOG00000010763 RatGTEx
  ENSRNOG00000069065 RatGTEx
UniProt A0A8I5ZNU9 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I5ZSZ5_RAT UniProtKB/TrEMBL
  A0A8I5ZXH0 ENTREZGENE, UniProtKB/TrEMBL
  A6I670 ENTREZGENE
  B0BN67 ENTREZGENE, UniProtKB/TrEMBL
  F7F956_RAT UniProtKB/TrEMBL
UniProt Secondary A6I670 UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2009-06-12 Fam181b  family with sequence similarity 181, member B  RGD1564695  similar to A830059I20Rik protein   Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2008-04-30 RGD1564695  similar to A830059I20Rik protein   RGD1564695_predicted  similar to A830059I20Rik protein (predicted)  'predicted' is removed 2292626 APPROVED
2006-03-07 RGD1564695_predicted  similar to A830059I20Rik protein (predicted)  LOC499205  similar to A830059I20Rik protein  Symbol and Name status set to approved 1299863 APPROVED
2006-02-09 LOC499205  similar to A830059I20Rik protein      Symbol and Name status set to provisional 70820 PROVISIONAL