Kiaa1328 (KIAA1328 homolog) - Rat Genome Database

Name: Kiaa1328
Creator: Rat Genome Database
License: Creative Commons CC BY 4.0
Keywords: Rat Gene RGD Genome

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Gene: Kiaa1328 (KIAA1328 homolog) Rattus norvegicus

Analyze

Symbol:

Kiaa1328 (Ensembl: RGD1562608)

Name:

KIAA1328 homolog (Ensembl:similar to KIAA1328 protein)

RGD ID:

1562608

Description:

Orthologous to human KIAA1328 (KIAA1328); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 2,5-hexanedione; 6-propyl-2-thiouracil.

Type:

protein-coding

RefSeq Status:

PROVISIONAL

Previously known as:

hypothetical protein LOC498831; LOC102554494; LOC498831; LOC498832; MGC188779; RGD1562608; RGD1564140; similar to AW554918 protein; similar to KIAA1328 protein; uncharacterized LOC102554494; uncharacterized protein KIAA1328 homolog; uncharacterized protein LOC498831

RGD Orthologs

Alliance Genes

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	KIAA1328 (KIAA1328)	HGNC	EggNOG, Ensembl, Inparanoid, OMA, OrthoDB, Treefam
Mus musculus (house mouse):	AW554918 (expressed sequence AW554918)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Kiaa1328 (KIAA1328 ortholog)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	KIAA1328 (KIAA1328 ortholog)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	KIAA1328 (KIAA1328)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Kiaa1328 (KIAA1328 ortholog)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	KIAA1328 (KIAA1328)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	KIAA1328 (KIAA1328 ortholog)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Kiaa1328 (KIAA1328 ortholog)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Other homologs ²
Homo sapiens (human):	SOX21 (SRY-box transcription factor 21)	HGNC	OMA
Alliance orthologs ³
Homo sapiens (human):	KIAA1328	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Mus musculus (house mouse):	AW554918 (expressed sequence AW554918)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	zgc:162344	Alliance	DIOPT (Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)

Latest Assembly:

mRatBN7.2 - mRatBN7.2 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
mRatBN7.2	18	16,488,569 - 16,776,373 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	18	16,489,408 - 16,775,548 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	18	16,682,654 - 16,953,769 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	18	17,465,314 - 17,736,441 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	18	16,744,586 - 17,018,482 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	18	17,394,586 - 17,678,605 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	18	17,403,407 - 17,676,049 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	18	17,149,133 - 17,432,367 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	18	17,205,204 - 17,333,938 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
Celera	18	16,407,003 - 16,676,223 (+)	NCBI		Celera
Cytogenetic Map	18	p12	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

genetic disease (ISO)

intellectual disability (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

(-)-epigallocatechin 3-gallate (ISO)

2,3,7,8-tetrachlorodibenzodioxine (EXP)

2,5-hexanedione (EXP)

4,4'-sulfonyldiphenol (ISO)

6-propyl-2-thiouracil (EXP)

acetamide (EXP)

aflatoxin B1 (ISO)

Aflatoxin B2 alpha (ISO)

all-trans-retinoic acid (ISO)

antirheumatic drug (ISO)

aristolochic acid A (ISO)

benzo[a]pyrene (ISO)

bisphenol A (EXP)

bisphenol F (ISO)

butanal (ISO)

cadmium dichloride (EXP)

caffeine (ISO)

doxorubicin (ISO)

fulvestrant (ISO)

gentamycin (EXP)

N,N-diethyl-m-toluamide (EXP)

O-methyleugenol (ISO)

paracetamol (EXP,ISO)

pentanal (ISO)

permethrin (EXP)

potassium chromate (ISO)

resveratrol (ISO)

sodium arsenite (ISO)

sunitinib (ISO)

titanium dioxide (ISO)

vinclozolin (EXP)

Gene Ontology Annotations Click to see Annotation Detail View

Molecular Function

protein binding (ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

Additional References at PubMed

PMID:12477932

Genomics

Comparative Map Data

Kiaa1328
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
mRatBN7.2	18	16,488,569 - 16,776,373 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	18	16,489,408 - 16,775,548 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	18	16,682,654 - 16,953,769 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	18	17,465,314 - 17,736,441 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	18	16,744,586 - 17,018,482 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	18	17,394,586 - 17,678,605 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	18	17,403,407 - 17,676,049 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	18	17,149,133 - 17,432,367 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	18	17,205,204 - 17,333,938 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
Celera	18	16,407,003 - 16,676,223 (+)	NCBI		Celera
Cytogenetic Map	18	p12	NCBI

KIAA1328
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	18	36,829,127 - 37,232,172 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	18	36,829,106 - 37,232,172 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	18	34,409,090 - 34,812,135 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	18	32,663,078 - 33,059,286 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	18	32,663,077 - 33,059,285	NCBI
Celera	18	31,218,516 - 31,615,191 (+)	NCBI		Celera
Cytogenetic Map	18	q12.2	NCBI
HuRef	18	31,267,966 - 31,664,168 (+)	NCBI		HuRef
CHM1_1	18	34,336,097 - 34,732,301 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	18	37,022,186 - 37,425,243 (+)	NCBI		T2T-CHM13v2.0

AW554918
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	18	25,301,825 - 25,600,378 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	18	25,302,056 - 25,600,378 (+)	Ensembl		GRCm39 Ensembl
GRCm38	18	25,168,730 - 25,467,321 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	18	25,168,999 - 25,467,321 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	18	25,327,521 - 25,625,822 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	18	25,312,030 - 25,433,918 (+)	NCBI		MGSCv36	mm8
Celera	18	25,654,554 - 25,953,134 (+)	NCBI		Celera
Cytogenetic Map	18	A2	NCBI
cM Map	18	13.74	NCBI

Kiaa1328
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955402	23,306,672 - 23,589,057 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955402	23,298,244 - 23,591,420 (+)	NCBI	ChiLan1.0	ChiLan1.0

KIAA1328
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1	18	39,913,490 - 40,309,688 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	18	30,081,706 - 30,477,445 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	18	33,639,555 - 34,034,686 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	18	33,639,535 - 34,031,582 (+)	Ensembl	panpan1.1		panPan2

KIAA1328
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	7	53,022,077 - 53,400,208 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	7	53,027,322 - 53,291,418 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	7	52,437,973 - 52,815,527 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	7	52,982,184 - 53,359,821 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	7	52,986,764 - 53,359,936 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	7	52,677,622 - 53,043,140 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	7	52,695,459 - 53,066,979 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	7	52,982,015 - 53,359,597 (-)	NCBI		UU_Cfam_GSD_1.0

Kiaa1328
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404944	48,992,660 - 49,245,123 (-)	NCBI		HiC_Itri_2
SpeTri2.0	NW_004936517	8,320,062 - 8,572,408 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

KIAA1328
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	6	120,670,342 - 121,035,931 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	6	120,670,317 - 121,035,937 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	6	113,547,251 - 113,806,703 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

KIAA1328
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	18	43,653,351 - 44,004,935 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	18	43,656,406 - 43,998,882 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666050	18,199,362 - 18,552,851 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Kiaa1328
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla 1.0	NW_004624779	11,107,359 - 11,428,028 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in Kiaa1328
1227 total Variants

miRNA Target Status

Predicted Target Of

	Summary Value
Count of predictions:	501
Count of miRNA genes:	248
Interacting mature miRNAs:	304
Transcripts:	ENSRNOT00000045150
Prediction methods:	Microtar, Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (mRatBN7.2)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
8552968	Pigfal19	Plasma insulin-like growth factor 1 level QTL 19	11.4		blood insulin-like growth factor amount (VT:0010479)	plasma insulin-like growth factor 1 level (CMO:0001299)	18	1	25758124	Rat
9590248	Scort10	Serum corticosterone level QTL 10	19.71	0.001	blood corticosterone amount (VT:0005345)	plasma corticosterone level (CMO:0001173)	18	1	25758124	Rat
2312598	Bp340	Blood pressure QTL 340		0.05	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	18	1	30558703	Rat
2300180	Bmd67	Bone mineral density QTL 67	4.8	0.0001	femur mineral mass (VT:0010011)	bone mineral density (CMO:0001226)	18	1	34291613	Rat
2293661	Bss50	Bone structure and strength QTL 50	4.64	0.0003	lumbar vertebra size trait (VT:0010518)	lumbar vertebra trabecular cross-sectional area (CMO:0001692)	18	1	34291613	Rat
61388	Bp2	Blood pressure QTL 2	3.23		arterial blood pressure trait (VT:2000000)	diastolic blood pressure (CMO:0000005)	18	1	35374722	Rat
9589153	Insul31	Insulin level QTL 31	7.15	0.05	blood insulin amount (VT:0001560)	plasma insulin level (CMO:0000342)	18	1	42547119	Rat
1641910	Colcr3	Colorectal carcinoma resistance QTL 3	5.02	0.000007	intestine integrity trait (VT:0010554)	poorly differentiated malignant colorectal tumor surface area measurement (CMO:0002078)	18	2249477	22066430	Rat
1641910	Colcr3	Colorectal carcinoma resistance QTL 3	5.02	0.000007	intestine integrity trait (VT:0010554)	poorly differentiated malignant colorectal tumor number (CMO:0002076)	18	2249477	22066430	Rat
2299160	Iddm35	Insulin dependent diabetes mellitus QTL 35	2.79		blood glucose amount (VT:0000188)	age at onset/diagnosis of type 1 diabetes mellitus (CMO:0001140)	18	4207941	60377792	Rat
2312568	Glom21	Glomerulus QTL 21	2	0.005	kidney glomerulus morphology trait (VT:0005325)	index of glomerular damage (CMO:0001135)	18	5185858	40503530	Rat
2293708	Bss46	Bone structure and strength QTL 46	8.8	0.0001	lumbar vertebra morphology trait (VT:0010494)	lumbar vertebra cortical cross-sectional area (CMO:0001690)	18	11791518	63636873	Rat
1578661	Bss20	Bone structure and strength QTL 20	3.7		femur morphology trait (VT:0000559)	femoral neck cross-sectional area (CMO:0001697)	18	11791518	83218561	Rat
1578667	Bss21	Bone structure and strength QTL 21	3.5		femur morphology trait (VT:0000559)	femoral neck cortical cross-sectional area (CMO:0001702)	18	11791518	83218561	Rat
61382	Bp46	Blood pressure QTL 46	18.8		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	18	11941791	31393320	Rat
631264	Scl22	Serum cholesterol level QTL 22	6.2		blood cholesterol amount (VT:0000180)	serum total cholesterol level (CMO:0000363)	18	11941791	31393320	Rat
12904690	Cm129	Cardiac mass QTL 129		0.001	heart left ventricle mass (VT:0007031)	heart left ventricle weight to body weight ratio (CMO:0000530)	18	11944273	26548295	Rat
12904689	Cm128	Cardiac mass QTL 128		0.001	heart mass (VT:0007028)	heart wet weight to body weight ratio (CMO:0002408)	18	11944273	26548295	Rat
12904693	Am20	Aortic mass QTL 20		0.001	aorta mass (VT:0002845)	aorta weight to aorta length to body weight ratio (CMO:0002722)	18	11944273	26548295	Rat
12904695	Kidm73	Kidney mass QTL 73		0.001	kidney mass (VT:0002707)	both kidneys wet weight to body weight ratio (CMO:0000340)	18	11944273	26548295	Rat
12904691	Cm130	Cardiac mass QTL 130		0.001	heart right ventricle mass (VT:0007033)	heart right ventricle weight to body weight ratio (CMO:0000914)	18	11944273	26548295	Rat
12904680	Bw189	Body weight QTL 189		0.019	body mass (VT:0001259)	body weight (CMO:0000012)	18	11944273	26548295	Rat
2301410	Bp317	Blood pressure QTL 317		0.004	arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	18	11944273	26548295	Rat
1331781	Scl28	Serum cholesterol level QTL 28	3.995		blood HDL cholesterol amount (VT:0000184)	serum high density lipoprotein cholesterol level (CMO:0000361)	18	11944299	24797117	Rat
1331766	Bp236	Blood pressure QTL 236	3.022		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	18	11944299	31359530	Rat
61375	Bp41	Blood pressure QTL 41	2.4		blood pressure trait (VT:0000183)	systolic blood pressure (CMO:0000004)	18	11944299	41122201	Rat
1331753	Bp231	Blood pressure QTL 231	3.643		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	18	11944299	52293055	Rat
1358358	Sradr6	Stress Responsive Adrenal Weight QTL 6	2.49		adrenal gland mass (VT:0010420)	both adrenal glands wet weight (CMO:0000164)	18	11944299	59330563	Rat
6903359	Bp355	Blood pressure QTL 355	3.6		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	18	11944544	59796478	Rat
2313082	Bss85	Bone structure and strength QTL 85	0.8	0.0001	long bone metaphysis morphology trait (VT:0000133)	tibia midshaft total cross-sectional area (CMO:0001715)	18	14951337	59951337	Rat

Markers in Region

D18Chm7

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	18	16,758,934 - 16,759,137 (+)	MAPPER	mRatBN7.2
Rnor_6.0	18	17,661,173 - 17,661,373	NCBI	Rnor6.0
Rnor_5.0	18	17,415,071 - 17,415,271	UniSTS	Rnor5.0
RGSC_v3.4	18	17,318,631 - 17,318,831	UniSTS	RGSC3.4
Celera	18	16,662,064 - 16,662,255	UniSTS
Cytogenetic Map	18	p12	UniSTS

RH144313

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	18	16,706,240 - 16,706,413 (+)	MAPPER	mRatBN7.2
Rnor_6.0	18	17,609,809 - 17,609,981	NCBI	Rnor6.0
Rnor_5.0	18	17,363,707 - 17,363,879	UniSTS	Rnor5.0
RGSC_v3.4	18	17,265,940 - 17,266,112	UniSTS	RGSC3.4
Celera	18	16,609,380 - 16,609,552	UniSTS
RH 3.4 Map	18	192.4	UniSTS
Cytogenetic Map	18	p12	UniSTS

RH141581

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	18	16,520,969 - 16,521,163 (+)	MAPPER	mRatBN7.2
mRatBN7.2	12	11,317,019 - 11,317,213 (-)	MAPPER	mRatBN7.2
mRatBN7.2	12	11,317,019 - 11,317,213 (+)	MAPPER	mRatBN7.2
mRatBN7.2	18	16,520,969 - 16,521,163 (-)	MAPPER	mRatBN7.2
Rnor_6.0	18	17,428,863 - 17,429,056	NCBI	Rnor6.0
Rnor_6.0	12	13,370,553 - 13,370,746	NCBI	Rnor6.0
Rnor_5.0	12	15,411,303 - 15,411,496	UniSTS	Rnor5.0
Rnor_5.0	18	17,182,865 - 17,183,058	UniSTS	Rnor5.0
RGSC_v3.4	18	17,099,133 - 17,099,326	UniSTS	RGSC3.4
RGSC_v3.4	12	11,677,551 - 11,677,744	UniSTS	RGSC3.4
Celera	12	13,110,368 - 13,110,561	UniSTS
Celera	18	16,431,882 - 16,432,075	UniSTS
Cytogenetic Map	18	p12	UniSTS
Cytogenetic Map	12	p11	UniSTS

Expression

RNA-SEQ Expression

High: > 1000 TPM value Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM Below Cutoff: < 0.5 TPM

	alimentary part of gastrointestinal system	circulatory system	endocrine system	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	appendage
High
Medium			6		1				10	1	12	8
Low	3	43	47	37	18	37	8	10	64	34	29	3	8
Below cutoff			4	4		4		1

View RNA-SEQ Expression Data

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001134607	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_003751756	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017601011	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017601012	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039097026	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039097027	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039097028	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039097029	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039097030	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039097031	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039097032	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039097033	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039097034	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039097035	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039097036	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	BC166863	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH473974	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JACYVU010000299	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSRNOT00000045150 ⟹ ENSRNOP00000048010

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	18	16,489,880 - 16,773,817 (+)	Ensembl
Rnor_6.0 Ensembl	18	17,403,407 - 17,676,049 (+)	Ensembl

RefSeq Acc Id:

ENSRNOT00000078870 ⟹ ENSRNOP00000069550

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	18	16,645,883 - 16,703,363 (+)	Ensembl
Rnor_6.0 Ensembl	18	17,550,350 - 17,607,108 (+)	Ensembl

RefSeq Acc Id:

ENSRNOT00000103230 ⟹ ENSRNOP00000080158

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	18	16,489,408 - 16,773,817 (+)	Ensembl

RefSeq Acc Id:

ENSRNOT00000103608 ⟹ ENSRNOP00000088715

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	18	16,489,880 - 16,775,548 (+)	Ensembl

RefSeq Acc Id:

ENSRNOT00000116047 ⟹ ENSRNOP00000079204

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	18	16,501,199 - 16,773,817 (+)	Ensembl

RefSeq Acc Id:

NM_001134607 ⟹ NP_001128079

RefSeq Status:

PROVISIONAL

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	18	16,496,091 - 16,773,817 (+)	NCBI
Rnor_6.0	18	17,403,407 - 17,676,049 (+)	NCBI
Rnor_5.0	18	17,149,133 - 17,432,367 (+)	NCBI
RGSC_v3.4	18	17,205,204 - 17,333,938 (+)	RGD
Celera	18	16,407,003 - 16,676,223 (+)	RGD

Sequence:

show sequence

TCTGATGAAGAACAATCCGTAGTTTATGTTCCAGGAATCTCCACAGAAAGAAATACAAGATCAA
GGCTCAAGTTGATAAATCCAAAAGTTGATGCTAAAGTTAAGGTTCCCAAGGTGACTGATATTCC
TGCCTCCATGGAGTCTTTAAAAGGTGCAGGAGATTCAGTAGCTGAACAGAGTTTCTGCAAGAGA
GGACTGAAGAGTGCGTCATTGAAAGATTTATGTGTTGAGGACAAAAGGCGCATTGCCAATTTAA
TTAAAGAACTGGCCAGAGTAAGTGAAGAAAAGGAGGTGACAGAGGAGCGACTGAAAACTGAGCA
GGAGTCCTTTGAGAAGAAGATCCGGCAGTTGGAGGAACAGAATGAACTGATCATCAAAGAAAGG
GAAGATATCCTTTTGAAATATAGAGAATGTCAAGAACTTCTAAGTCTCTACCAGAAGTACCTGT
CAGAGCAGCAAGAGAAGCTTACCATGTCGCTCTCAGAGCTTGGAGCTGCTAGAGCACAGGAACA
GCAGATAACCAAGAAGAAAATCACTCACCAGTCTTCATTGGTGAACCTGGATGGTTCCTATCTG
AGTGTAGCCAAACCGCAAACCTGCCAGACCAGGGCCAGGCCTAAGTCAGAAAACCAGGACTCAG
CTTCAGAATCCCACACAGCATTAAGGAATAATTCTTTGAAACCAGTAACACTTCATCATCCCAA
ACAGGATTTAGAGAGGATGTCAACAGAAACCAGAACGTGTACTTATGAATCTCCAGGGAGGAGA
CTAATAAATGCAGCCCCAGTAGAGGAAGCTCTCCCAGAAGAGTTGAAGATAAAGGACTATCCAA
ACCTTCTGCCTACTCCATCTAGTCAGTACTGTGGTCATAAATACTCTGAAAGTGAAGCTTATGT
TCATGAGAACTATCATCCTACGAACATGGCCTCTCAGTGTTGTAAGACACATCCAGAATCATGC
AGTCATTGTAGGATGTCCTGGGCATCTCTCATGCATGATGGAGTGACACTGCAACCCAGAGAAA
CCGACATCGAAAAACAACTCTCAGAAGATCGAAGGCAGCAGCTGATGCTTCAGAAAATGGAACT
GGAAATTGAAAAGGAACGCCTTCAGCAACTCCTGGCCCAACAAGAGACAAAGCTTCTCCTTAAA
CAGCAGCAGCTGCACCAATCCCGACTAGATTACAATTGTTTATTGAAGCCGAAATGTGATGGAT
GGCTGCGTGGAACCTCATCGTCCTTCAGAAAGTGCCCAGACTCTCCAAACAGTGCGCAAAACCA
GAAGGAGAAGAAAACTGTTGAGTTTCAGTCACACGTGGAGAATGGCATTCAATGGACATGTCAA
CAGAATGACACATGCAGACTCCAGAGAGAGACAGCAACTGGAGTTAGAAAAGATGCTTCCACAT
CTCCTATGTCAACACAAAGCCCTAAACACCCCCTGACACCAGCCTCATCGTCATCCAAGCACAA
AACCTCAAGGTATGAGACATCTCTGTTGGACTTGGTTCAGTCTCTGAGCCCAAATTCTGCTCCT
AAATGTCAGCCCCATTCCTCCAGAGCAGCAGGGACATGGAGTGCTCTCCGACCTACCCCTAAGA
CATCTACCTGGAAGAAAGTGGGGACACATAAGAGCCCTGAGGACCTGGAGGAGAATCAGATTCT
GGAAGACATATTTTTCATATGACTCTGAAGCACATGCTACAGAATTTCCACAGGAAATATTTGA
GTTTCTTTCCATATTGATGTAGGATGTTAAACTGAAAAGAAGCCGTGTCTCTCCTTTCGTGGAG
ACCTCTTGCTGGCATCCTTTTATAGTATTGAATATAGAAAGCATTCTTATAAATCAGGGTGGTT
TTTGTCAGACCAGTTAGCAGAAACAGACTAAAGGGGGTCACTTAGAGGTAGGATCTTTTCTATA
CCAAACAGAAATTAGAAATTGTGGATACTGCCTGCATAGTAAAACCCATGAATGTCTAGTGTCA
TTTTAAGAGTGTTTTCAATTTACTACTGCAAAAAGTTGACTCTTTACAGATGGAAAACGTTCCC
ATTGACAGACCCCTTAAATATGAAAGTAGCCACTTCAGAAAGGCTCTTCTCTCCTCACCAATGC
TAAGTGTGGCGCTTCATTCCGACGTTGAAGTTGGTGACTCTAATATCATCTTACATGGGACCAA
TACTTGTGGGTCATAGTGGTCAACCGAGTCATTGCCACCCCTTAAACCAAAAGGCTGAATGACT
TAGAGGGAAGTTTGCAACCAGACAGTGGCATTAGACCACATGAGGGCATGGCCGCCTGGGGAAA
TTTACCAGTGTCCAGGCAGCCACCTCTCCAGTGTTCCATGATGGGTGTTTCTTGTCGACTTCAG
TGTTGTAAACTTTACCTGTGGTTGTGTCTGAGGAAGATAGCACTAGAGGAAGAGTGGTGTCGAG
TGGCTGCAGGCTGGCAGGTTCCTTCTGCCCCACCTCACACCATAGGACGAGTATCCTCCTCTGA
GCACCGTGGATGCAGAGTCTGAGAACGCTCTGCTGATTACCCTTCTTGGCCCAGATCTAGATCT
TTTCTCCTCAGGCTGAGCTCAGTGCT

hide sequence

RefSeq Acc Id:

XM_003751756 ⟹ XP_003751804

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	18	16,489,625 - 16,776,373 (+)	NCBI
Rnor_6.0	18	17,396,951 - 17,678,605 (+)	NCBI
Rnor_5.0	18	17,149,133 - 17,432,367 (+)	NCBI

Sequence:

show sequence

GCGCCTGAGGGCTCCGCCAGGAGAGGATGGGCGGCCCGGGCGGCTTTGGCAGCAGCGGTTCCGC
CGGGCGCTCGTTCCCGCGACCCTGGCCCGGGCCTCACTTCACATCTCCGCAACCCCGCCTCACC
TCGGCCCGGAGCCTCTCCCCTCGCCGGGGCCGGAGGCGCAAGCGGGGGCGGGCCTCTGCGCCGA
GTGGCCAATGGGGACGGAGCCTGGCGGTCGGGGCGTGGCGGCCCCGACTCGACGCCTCGAGTGG
CGGTTGTTTCAAGATGGCGGGCGCGGCGGGCCCCTCCCTGCCGGGCTCCGCGTTCTGGAGCCGC
GACTTTTCTGATGAAGAACAATCCGTAGTTTATGTTCCAGGAATCTCCACAGAAAGAAATACAA
GATCAAGGCTCAAGTTGATAAATCCAAAAGTTGATGCTAAAGTTAAGGTTCCCAAGGTGACTGA
TATTCCTGCCTCCATGGAGTCTTTAAAAGGTGCAGGAGATTCAGTAGCTGAACAGAGTTTCTGC
AAGAGAGGACTGAAGAGTGCGTCATTGAAAGATTTATGTGTTGAGGACAAAAGGCGCATTGCCA
ATTTAATTAAAGAACTGGCCAGAGTAAGTGAAGAAAAGGAGGTGACAGAGGAGCGACTGAAAAC
TGAGCAGGAGTCCTTTGAGAAGAAGATCCGGCAGTTGGAGGAACAGAATGAACTGATCATCAAA
GAAAGGGAAGCTCTTCAGCTACAGTATAGAGAATGTCAAGAACTTCTAAGTCTCTACCAGAAGT
ACCTGTCAGAGCAGCAAGAGAAGCTTACCATGTCGCTCTCAGAGCTTGGAGCTGCTAGAGCACA
GGAACAGCAGATAACCAAGAAGAAAATCACTCACCAGTCTTCATTGGTGAACCTGGATGGTTCC
TATCTGAGTGTAGCCAAACCGCAAACCTGCCAGACCAGGGCCAGGCCTAAGTCAGAAAACCAGG
ACTCAGCTTCAGAATCCCACACAGCATTAAGGAATAATTCTTTGAAACCAGTAACACTTCATCA
TCCCAAACAGGATTTAGAGAGGATGTCAACAGAAACCAGAACGTGTACTTATGAATCTCCAGGG
AGGAGACTAATAAATGCAGCCCCAGTAGAGGAAGCTCTCCCAGAAGAGTTGAAGATAAAGGACT
ATCCAAACCTTCTGCCTACTCCATCTAGTCAGTACTGTGGTCATAAATACTCTGAAAGTGAAGC
TTATGTTCATGAGAACTATCATCCTACGAACATGGCCTCTCAGTGTTGTAAGACACATCCAGAA
TCATGCAGTCATTGTAGGATGTCCTGGGCATCTCTCATGCATGATGGAGTGACACTGCAACCCA
GAGAAACCGACATCGAAAAACAACTCTCAGAAGATCGAAGGCAGCAGCTGATGCTTCAGAAAAT
GGAACTGGAAATTGAAAAGGAACGCCTTCAGCAACTCCTGGCCCAACAAGAGACAAAGCTTCTC
CTTAAACAGCAGCAGCTGCACCAATCCCGACTAGATTACAATTGGTTAAGAACTCAAGCTGTGT
TTAGATCTCGAGAACTGGTTGCTGATAAAGACTTTCCTAAACCTGGAAGTGACTCTGGACCAAG
TTTATTGAAGCCGAAATGTGATGGATGGCTGCGTGGAACCTCATCGTCCTTCAGAAAGTGCCCA
GACTCTCCAAACAGTGCGCAAAACCAGAAGGAGAAGAAAACTGTTGAGTTTCAGTCACACGTGG
AGAATGGCATTCAATGGACATGTCAACAGAATGACACATGCAGACTCCAGAGAGAGACAGCAAC
TGGAGTTAGAAAAGATGCTTCCACATCTCCTATGTCAACACAAAGCCCTAAACACCCCCTGACA
CCAGCCTCATCGTCATCCAAGCACAAAACCTCAAGGTATGAGACATCTCTGTTGGACTTGGTTC
AGTCTCTGAGCCCAAATTCTGCTCCTAAATGTCAGCCCCATTCCTCCAGAGCAGCAGGGACATG
GAGTGCTCTCCGACCTACCCCTAAGACATCTACCTGGAAGAAAGTGGGGACACATAAGAGCCCT
GAGGACCTGGAGGAGAATCAGATTCTGGAAGACATATTTTTCATATGACTCTGAAGCACATGCT
ACAGAATTTCCACAGGAAATATTTGAGTTTCTTTCCATATTGATGTAGGATGTTAAACTGAAAA
GAAGCCGTGTCTCTCCTTTCGTGGAGACCTCTTGCTGGCATCCTTTTATAGTATTGAATATAGA
AAGCATTCTTATAAATCAGGGTGGTTTTTGTCAGACCAGTTAGCAGAAACAGACTAAAGGGGGT
CACTTAGAGGTAGGATCTTTTCTATACCAAACAGAAATTAGAAATTGTGGATACTGCCTGCATA
GTAAAACCCATGAATGTCTAGTGTCATTTTAAGAGTGTTTTCAATTTACTACTGCAAAAAGTTG
ACTCTTTACAGATGGAAAACGTTCCCATTGACAGACCCCTTAAATATGAAAGTAGCCACTTCAG
AAAGGCTCTTCTCTCCTCACCAATGCTAAGTGTGGCGCTTCATTCCGACGTTGAAGTTGGTGAC
TCTAATATCATCTTACATGGGACCAATACTTGTGGGTCATAGTGGTCAACCGAGTCATTGCCAC
CCCTTAAACCAAAAGGCTGAATGACTTAGAGGGAAGTTTGCAACCAGACAGTGGCATTAGACCA
CATGAGGGCATGGCCGCCTGGGGAAATTTACCAGTGTCCAGGCAGCCACCTCTCCAGTGTTCCA
TGATGGGTGTTTCTTGTCGACTTCAGTGTTGTAAACTTTACCTGTGGTTGTGTCTGAGGAAGAT
AGCACTAGAGGAAGAGTGGTGTCGAGTGGCTGCAGGCTGGCAGGTTCCTTCTGCCCCACCTCAC
ACCATAGGACGAGTATCCTCCTCTGAGCACCGTGGATGCAGAGTCTGAGAACGCTCTGCTGATT
ACCCTTCTTGGCCCAGATCTAGATCTTTTCTCCTCAGGCTGAGCTCAGTGCTGTTGGTTCTACT
CAGGCTCCCTCCCAAGCTCATACTCTTCCTCTGAAGCAGCTGCAAGGGCAAGACTAATTACCCT
TTGGAAATTTAAAGTTCATTGAAAATTCCAATTTTCTTTTCAAATTCAGCCTGAGAGTAACTAG
AACAGACTTGTTCTACTTCAAAACACCTTTAGGATATGCCTTTGGAGGGGCAGAAATAGCCATA
TTCTCAGTTGGGTTTCCAGAAACATCTTTTCTCTATCTTGTGTCAAAGACAGCTTAACTATACC
TATTTCTTTACACCTGCTATAACCATAGTCACCGTTCTGAGCATCAGTAGTCTTACTACTCCTG
TATATCTCCAGAAGGAAAAGAAAGAGAATCTGATCTCCTTAAGAAGCTTATTTACAGGTAGAAG
AGTTGTAAACGGCCTAAAAATGAAAGCTTTTGTGCAGTGACATGCCAGTGAATAGAATTTAATT
GCTTCTTCACCAGCATGGGAAGTTTGGAAGAGAAAAAAGGGGGGTTTTCAGTCAGTACACTTTT
TATACTTCACAGATCTGCCATGCGTTACCTTCTTCTCATGCATATACATACATACATACACACA
CACACACACACACACGGATATATATATATATATATATATATATATATATATATATATATATATC
CTAGTGACTTTGTTATTAACCAAATAGTATATTGTGGCCCATCCCACAGAAGAATGGGAAGAAA
GTAGGAGCCATGTGCCTCCCTGGATAATGCTCTCTTCGGTGGTTGGTTGGGACTTGCTTGGCCA
GCTCCTAGATGTTTCCTCCAAGCAAAACTGCACTCAATGATAAAAATTTAGTTTAACAAGATTC
ACCAAGGTCACCAGATAGTAAGGAGCAATTCAAACCCAGAGGTGAAGATGGGGGGAAGGGGAGT
CATTGTTCTTTTCTTTACTTCTCTTTCCTATTTTGAGTAAATATCAAAACCATCAAGACCATTT
TCTACAGTCCAGTTATTATTTATCAGACACATGGATTGGTAAGGAGAGGAGAGCAGTGGGAAGA
AGGGATTAAAGGAAACAGGCCTACATCCCTTTGCAGCCTTGGTACAATTCCTTATTGCATGCAG
TTCTCTCATAAAGGAGAAGAGGACCAGAAGAGAGAAATGGAGATGGTGGGCTCTGGGACCCTTC
CACTGCTCCTTCCTCAGTGCCTTATCTGCAGTGTTTAATGTTTTTCTTCCAAATTTAAGATTTC
TAACTCTCATACTTGGAAATACAAAGAACTCCCCAGGGCTTACAGGTCAAGGGGCACAGGCCCT
AGAGAGGCACATCAGGGCTCTCTGTCTCCAGCCCCATGTCCCTTTGCTGCATCAGCCGCCTCCA
TTACCCTCTTCTTTGCTCCCCATTGCAGCTCACCACTGTTAGACACATCCCAATGGCACACTTC
TCTTCCCAGGTCCTTCTGGGTGAATAACTTAAGACTAAGTTTTTACCACTTTGTGAAATTTTCC
TTATGTTCCTGGCACTGTGTACTGTTGACTCCAGTAAGATGTGCAGATATGTCCAACCCATAAG
CCATAAGCTGTGACGTATGGTCAAGGATAGCTGTGAATGTGGCCCAACACAAAATTGTAAACGT
AAGACATTTTGAGTAGTGTGGTTATTTTTGTTTTTCACTTTTGTGTGTGTGACTTGATTGTGCA
GCTCTCAAACATGAACATTGTATATAATAAATCATGTCATCATGTTGCTGTGTCAAAGGCTGGC
CATGCGGCAAGTCCAAGCCTCTGTGGTGGCCCTCCTCGTCATGCCACATTGTACTGGGTACTGT
TTGCCTTTCTTGTTAGAGTTCCAGGTGTCCAGACTAACATATGCTATGTCGGAGAAGCCAAGTT
CACCATTTGTAACATACAGACATGCAGGTGAGTTATTGATACCTTCAGATAATGATAATTCTAC
CTGCAGTTTTAGGCCTTATCTGCTGACCTAGCCCTAAAAGCCTAGACCAGAGAAAAGCTAGAAT
GAGAAGGTCAAAGTTCCCAAGAATGTGAAGCTGACAGTTGGGGGGCACTGAGACCCATCTCCTT
AGAACATGGGGCAACCAACAGACCCAAAGGCAGGGAGCAGAGTCAGTGTTAGAACAGTACAGAG
CTGGTTGACCAGAACAGTTTCATTCCAGAGCTGACACCCCTCTGCCCTCTGTGGTCTGACACCT
GATTGGCTCATGCCAAGCAAGCACTAGCACAAACATTGCCCACAGTGACTCCCACCCAGAAGCT
CCCTCTTTCTCTTCCCCAGATGCTGCCCCACACTCTCCTCCACACTCTTTCCAGCTCTAGGTCC
TAAGGTGGCCAGGAGGCTGCTGAGATGAGGGAGACCATGCTGTATCCCAGGGAAATGGGGTGAG
CCCTTAGTTTTCAAACCTCCTCTGAGAGATTTTAACTTGTTGGATTTATGTAGCATTGGAAAAT
GATAAACTGTATGAATTTTCTGTATTTTCCATGGACAGTTATTTATGGAGGGGCGTTTTTAACT
CAAGTGCTAGAAATGTTAAATCATCATAATAAATTCATGCTATTCAGA

hide sequence

RefSeq Acc Id:

XM_017601011 ⟹ XP_017456500

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	18	16,489,625 - 16,776,373 (+)	NCBI
Rnor_6.0	18	17,396,951 - 17,678,605 (+)	NCBI

Sequence:

show sequence

GCGCCTGAGGGCTCCGCCAGGAGAGGATGGGCGGCCCGGGCGGCTTTGGCAGCAGCGGTTCCGC
CGGGCGCTCGTTCCCGCGACCCTGGCCCGGGCCTCACTTCACATCTCCGCAACCCCGCCTCACC
TCGGCCCGGAGCCTCTCCCCTCGCCGGGGCCGGAGGCGCAAGCGGGGGCGGGCCTCTGCGCCGA
GTGGCCAATGGGGACGGAGCCTGGCGGTCGGGGCGTGGCGGCCCCGACTCGACGCCTCGAGTGG
CGGTTGTTTCAAGATGGCGGGCGCGGCGGGCCCCTCCCTGCCGGGCTCCGCGTTCTGGAGCCGC
GACTTTTCTGATGAAGAACAATCCGTAGTTTATGTTCCAGGAATCTCCACAGAAAGAAATACAA
GATCAAGGCTCAAGTTGATAAATCCAAAAGTTGATGCTAAAGTTAAGGTTCCCAAGGTGACTGA
TATTCCTGCCTCCATGGAGTCTTTAAAAGGTGCAGGAGATTCAGTAGCTGAACAGAGTTTCTGC
AAGAGAGGACTGAAGAGTGCGTCATTGAAAGATTTATGTGTTGAGGACAAAAGGCGCATTGCCA
ATTTAATTAAAGAACTGGCCAGAGTAAGTGAAGAAAAGGAGGTGACAGAGGAGCGACTGAAAAC
TGAGCAGGAGTCCTTTGAGAAGAAGATCCGGCAGTTGGAGGAACAGAATGAACTGATCATCAAA
GAAAGGGAAGCTCTTCAGCTACAGTATAGAGAATGTCAAGAACTTCTAAGTCTCTACCAGAAGT
ACCTGTCAGAGCAGCAAGAGAAGCTTACCATGTCGCTCTCAGAGCTTGGAGCTGCTAGAGCACA
GGAACAGCAGATAACCAAGAAGAAAATCACTCACCAGTCTTCATTGGTGAACCTGGATGGTTCC
TATCTGAGTGTAGCCAAACCGCAAACCTGCCAGACCAGGGCCAGGCCTAAGTCAGAAAACCAGG
ACTCAGCTTCAGAATCCCACACAGCATTAAGGAATAATTCTTTGAAACCAGTAACACTTCATCA
TCCCAAACAGGATTTAGAGAGGATGTCAACAGAAACCAGAACGTGTACTTATGAATCTCCAGGG
AGGAGACTAATAAATGCAGCCCCAGTAGAGGAAGCTCTCCCAGAAGAGTTGAAGATAAAGGACT
ATCCAAACCTTCTGCCTACTCCATCTAGTCAGTACTGTGGTCATAAATACTCTGAAAGTGAAGC
TTATGTTCATGAGAACTATCATCCTACGAACATGGCCTCTCAGTGTTGTAAGACACATCCAGAA
TCATGCAGTCATTGTAGGATGTCCTGGGCATCTCTCATGCATGATGGAGTGACACTGCAACCCA
GAGAAACCGACATCGAAAAACAACTCTCAGAAGATCGAAGGCAGCAGCTGATGCTTCAGAAAAT
GGAACTGGAAATTGAAAAGGAACGCCTTCAGCAACTCCTGGCCCAACAAGAGACAAAGCTTCTC
CTTAAACAGCAGCAGCTGCACCAATCCCGACTAGATTACAATTGTTTATTGAAGCCGAAATGTG
ATGGATGGCTGCGTGGAACCTCATCGTCCTTCAGAAAGTGCCCAGACTCTCCAAACAGTGCGCA
AAACCAGAAGGAGAAGAAAACTGTTGAGTTTCAGTCACACGTGGAGAATGGCATTCAATGGACA
TGTCAACAGAATGACACATGCAGACTCCAGAGAGAGACAGCAACTGGAGTTAGAAAAGATGCTT
CCACATCTCCTATGTCAACACAAAGCCCTAAACACCCCCTGACACCAGCCTCATCGTCATCCAA
GCACAAAACCTCAAGGTATGAGACATCTCTGTTGGACTTGGTTCAGTCTCTGAGCCCAAATTCT
GCTCCTAAATGTCAGCCCCATTCCTCCAGAGCAGCAGGGACATGGAGTGCTCTCCGACCTACCC
CTAAGACATCTACCTGGAAGAAAGTGGGGACACATAAGAGCCCTGAGGACCTGGAGGAGAATCA
GATTCTGGAAGACATATTTTTCATATGACTCTGAAGCACATGCTACAGAATTTCCACAGGAAAT
ATTTGAGTTTCTTTCCATATTGATGTAGGATGTTAAACTGAAAAGAAGCCGTGTCTCTCCTTTC
GTGGAGACCTCTTGCTGGCATCCTTTTATAGTATTGAATATAGAAAGCATTCTTATAAATCAGG
GTGGTTTTTGTCAGACCAGTTAGCAGAAACAGACTAAAGGGGGTCACTTAGAGGTAGGATCTTT
TCTATACCAAACAGAAATTAGAAATTGTGGATACTGCCTGCATAGTAAAACCCATGAATGTCTA
GTGTCATTTTAAGAGTGTTTTCAATTTACTACTGCAAAAAGTTGACTCTTTACAGATGGAAAAC
GTTCCCATTGACAGACCCCTTAAATATGAAAGTAGCCACTTCAGAAAGGCTCTTCTCTCCTCAC
CAATGCTAAGTGTGGCGCTTCATTCCGACGTTGAAGTTGGTGACTCTAATATCATCTTACATGG
GACCAATACTTGTGGGTCATAGTGGTCAACCGAGTCATTGCCACCCCTTAAACCAAAAGGCTGA
ATGACTTAGAGGGAAGTTTGCAACCAGACAGTGGCATTAGACCACATGAGGGCATGGCCGCCTG
GGGAAATTTACCAGTGTCCAGGCAGCCACCTCTCCAGTGTTCCATGATGGGTGTTTCTTGTCGA
CTTCAGTGTTGTAAACTTTACCTGTGGTTGTGTCTGAGGAAGATAGCACTAGAGGAAGAGTGGT
GTCGAGTGGCTGCAGGCTGGCAGGTTCCTTCTGCCCCACCTCACACCATAGGACGAGTATCCTC
CTCTGAGCACCGTGGATGCAGAGTCTGAGAACGCTCTGCTGATTACCCTTCTTGGCCCAGATCT
AGATCTTTTCTCCTCAGGCTGAGCTCAGTGCTGTTGGTTCTACTCAGGCTCCCTCCCAAGCTCA
TACTCTTCCTCTGAAGCAGCTGCAAGGGCAAGACTAATTACCCTTTGGAAATTTAAAGTTCATT
GAAAATTCCAATTTTCTTTTCAAATTCAGCCTGAGAGTAACTAGAACAGACTTGTTCTACTTCA
AAACACCTTTAGGATATGCCTTTGGAGGGGCAGAAATAGCCATATTCTCAGTTGGGTTTCCAGA
AACATCTTTTCTCTATCTTGTGTCAAAGACAGCTTAACTATACCTATTTCTTTACACCTGCTAT
AACCATAGTCACCGTTCTGAGCATCAGTAGTCTTACTACTCCTGTATATCTCCAGAAGGAAAAG
AAAGAGAATCTGATCTCCTTAAGAAGCTTATTTACAGGTAGAAGAGTTGTAAACGGCCTAAAAA
TGAAAGCTTTTGTGCAGTGACATGCCAGTGAATAGAATTTAATTGCTTCTTCACCAGCATGGGA
AGTTTGGAAGAGAAAAAAGGGGGGTTTTCAGTCAGTACACTTTTTATACTTCACAGATCTGCCA
TGCGTTACCTTCTTCTCATGCATATACATACATACATACACACACACACACACACACACGGATA
TATATATATATATATATATATATATATATATATATATATATATCCTAGTGACTTTGTTATTAAC
CAAATAGTATATTGTGGCCCATCCCACAGAAGAATGGGAAGAAAGTAGGAGCCATGTGCCTCCC
TGGATAATGCTCTCTTCGGTGGTTGGTTGGGACTTGCTTGGCCAGCTCCTAGATGTTTCCTCCA
AGCAAAACTGCACTCAATGATAAAAATTTAGTTTAACAAGATTCACCAAGGTCACCAGATAGTA
AGGAGCAATTCAAACCCAGAGGTGAAGATGGGGGGAAGGGGAGTCATTGTTCTTTTCTTTACTT
CTCTTTCCTATTTTGAGTAAATATCAAAACCATCAAGACCATTTTCTACAGTCCAGTTATTATT
TATCAGACACATGGATTGGTAAGGAGAGGAGAGCAGTGGGAAGAAGGGATTAAAGGAAACAGGC
CTACATCCCTTTGCAGCCTTGGTACAATTCCTTATTGCATGCAGTTCTCTCATAAAGGAGAAGA
GGACCAGAAGAGAGAAATGGAGATGGTGGGCTCTGGGACCCTTCCACTGCTCCTTCCTCAGTGC
CTTATCTGCAGTGTTTAATGTTTTTCTTCCAAATTTAAGATTTCTAACTCTCATACTTGGAAAT
ACAAAGAACTCCCCAGGGCTTACAGGTCAAGGGGCACAGGCCCTAGAGAGGCACATCAGGGCTC
TCTGTCTCCAGCCCCATGTCCCTTTGCTGCATCAGCCGCCTCCATTACCCTCTTCTTTGCTCCC
CATTGCAGCTCACCACTGTTAGACACATCCCAATGGCACACTTCTCTTCCCAGGTCCTTCTGGG
TGAATAACTTAAGACTAAGTTTTTACCACTTTGTGAAATTTTCCTTATGTTCCTGGCACTGTGT
ACTGTTGACTCCAGTAAGATGTGCAGATATGTCCAACCCATAAGCCATAAGCTGTGACGTATGG
TCAAGGATAGCTGTGAATGTGGCCCAACACAAAATTGTAAACGTAAGACATTTTGAGTAGTGTG
GTTATTTTTGTTTTTCACTTTTGTGTGTGTGACTTGATTGTGCAGCTCTCAAACATGAACATTG
TATATAATAAATCATGTCATCATGTTGCTGTGTCAAAGGCTGGCCATGCGGCAAGTCCAAGCCT
CTGTGGTGGCCCTCCTCGTCATGCCACATTGTACTGGGTACTGTTTGCCTTTCTTGTTAGAGTT
CCAGGTGTCCAGACTAACATATGCTATGTCGGAGAAGCCAAGTTCACCATTTGTAACATACAGA
CATGCAGGTGAGTTATTGATACCTTCAGATAATGATAATTCTACCTGCAGTTTTAGGCCTTATC
TGCTGACCTAGCCCTAAAAGCCTAGACCAGAGAAAAGCTAGAATGAGAAGGTCAAAGTTCCCAA
GAATGTGAAGCTGACAGTTGGGGGGCACTGAGACCCATCTCCTTAGAACATGGGGCAACCAACA
GACCCAAAGGCAGGGAGCAGAGTCAGTGTTAGAACAGTACAGAGCTGGTTGACCAGAACAGTTT
CATTCCAGAGCTGACACCCCTCTGCCCTCTGTGGTCTGACACCTGATTGGCTCATGCCAAGCAA
GCACTAGCACAAACATTGCCCACAGTGACTCCCACCCAGAAGCTCCCTCTTTCTCTTCCCCAGA
TGCTGCCCCACACTCTCCTCCACACTCTTTCCAGCTCTAGGTCCTAAGGTGGCCAGGAGGCTGC
TGAGATGAGGGAGACCATGCTGTATCCCAGGGAAATGGGGTGAGCCCTTAGTTTTCAAACCTCC
TCTGAGAGATTTTAACTTGTTGGATTTATGTAGCATTGGAAAATGATAAACTGTATGAATTTTC
TGTATTTTCCATGGACAGTTATTTATGGAGGGGCGTTTTTAACTCAAGTGCTAGAAATGTTAAA
TCATCATAATAAATTCATGCTATTCAGA

hide sequence

RefSeq Acc Id:

XM_017601012 ⟹ XP_017456501

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	18	16,488,569 - 16,776,373 (+)	NCBI
Rnor_6.0	18	17,394,586 - 17,678,605 (+)	NCBI

Sequence:

show sequence

TAGTTTTAATATCCTTCAAAAGACTTTTACTGTTTTAGTGCAAAAGTCACAGACTTCTTTGTTA
ACTTAATTTCATTTTTGTATTGCCTTTTGCTACTGTATAGTGTGTGTGTGAGTGAATTATTTAG
GGTTAATTTGTAAGAGTTTATAATTTGCAAACAGGCATCTTTAGTTTTCTTATTATTGATTTCA
TTTTCCTGCCTACTTCCCTGGCCATAATTTCTATTACAAAGCTGAGTAGAAATGCTAGAATTGA
AAAAAATCAAGCATAGTAGAGTGGAGACTGCAGATGTTTACAAGACCTTGGATGGCCTTTGAGA
AGCTGGATTTCAGTGAGGTTTCCCTCATCATTAGATGAAAATGTCTCACTATCTGTAAACTGGA
ATGCAAATAAAGTGTGGAATATATTTTTCTTTTGAGAGACTGGAAGTTGGTACATGCTAGGTAA
AGGAAATTCTGGACTCCTTAGTTTGAGAGGACACTTTAGACATACTGTTACAAAGGTGTTGCTA
GACAAATTAAGTATGTCCTGTGTGGTTTCAGTGAGAAGACTCTTGAAAACGCTCACATAATTTT
CTTTTTTATTAGCTTCCTTGCCTGCATTTTCTCCTTTGTTGATTTTTGTTTTATCTCTTTCTGC
TGGGGCAAAATGAGCCTAGTGAATCCGCACACCTGGACCATTTGCTGCCCTTTCAGCATATTGT
GGTGTTGAGCGTAAGGGTAAAGCAGGTAGTCCTTCAACACAAAAGACTGTGAGATTATTCACAG
ATGCCCCTTATCAAGATAACGTTTTTTATTCTATTTTTTATTATTTTGAGGGAAAAAATCTTAT
TAGCTCAGCCTGACTTTGTGATCACCGTCATCATACTCCTTTCCCCGTGAAGGAATTACAGACA
TATGTCAATATTACTAGTATATTCTATTTGTAACATTTCCCCCCCATTTTTCAATCAAGAAAGT
GCTGGATTTTTGTCAAGGACCATTTTGGCAGTTTCTGAAAATGTAGGCTTTGTCCTTTGTTCTA
CTAACATTCTATTTACATCCTTTTTTTTTTTTTTACATATTAAACAAATCACACATTCCTAGAA
TAAATCAGCCTGGTCTCAGATTTCTACTACAGAAAAGGACCAAATAAAACACATAATTTCACAC
ACTGCTCATAGCTGTTAATAAGGTGGAAAAAAAAAAGGTTTACGAGAGAGCAATATGGGAAGGT
GTATGTAAGGCTTATTAGACGTAATACTTCGATCAGAAATTTAGACAAAGAACAGGAGACATTG
GGATGGAGATAATTCCAGGTGGAGGAAACTAAAAATGGTTACAGGAATCTCCACAGAAAGAAAT
ACAAGATCAAGGCTCAAGTTGATAAATCCAAAAGTTGATGCTAAAGTTAAGGTTCCCAAGGTGA
CTGATATTCCTGCCTCCATGGAGTCTTTAAAAGGTGCAGGAGATTCAGTAGCTGAACAGAGTTT
CTGCAAGAGAGGACTGAAGAGTGCGTCATTGAAAGATTTATGTGTTGAGGACAAAAGGCGCATT
GCCAATTTAATTAAAGAACTGGCCAGAGTAAGTGAAGAAAAGGAGGTGACAGAGGAGCGACTGA
AAACTGAGCAGGAGTCCTTTGAGAAGAAGATCCGGCAGTTGGAGGAACAGAATGAACTGATCAT
CAAAGAAAGGGAAGCTCTTCAGCTACAGTATAGAGAATGTCAAGAACTTCTAAGTCTCTACCAG
AAGTACCTGTCAGAGCAGCAAGAGAAGCTTACCATGTCGCTCTCAGAGCTTGGAGCTGCTAGAG
CACAGGAACAGCAGATAACCAAGAAGAAAATCACTCACCAGTCTTCATTGGTGAACCTGGATGG
TTCCTATCTGAGTGTAGCCAAACCGCAAACCTGCCAGACCAGGGCCAGGCCTAAGTCAGAAAAC
CAGGACTCAGCTTCAGAATCCCACACAGCATTAAGGAATAATTCTTTGAAACCAGTAACACTTC
ATCATCCCAAACAGGATTTAGAGAGGATGTCAACAGAAACCAGAACGTGTACTTATGAATCTCC
AGGGAGGAGACTAATAAATGCAGCCCCAGTAGAGGAAGCTCTCCCAGAAGAGTTGAAGATAAAG
GACTATCCAAACCTTCTGCCTACTCCATCTAGTCAGTACTGTGGTCATAAATACTCTGAAAGTG
AAGCTTATGTTCATGAGAACTATCATCCTACGAACATGGCCTCTCAGTGTTGTAAGACACATCC
AGAATCATGCAGTCATTGTAGGATGTCCTGGGCATCTCTCATGCATGATGGAGTGACACTGCAA
CCCAGAGAAACCGACATCGAAAAACAACTCTCAGAAGATCGAAGGCAGCAGCTGATGCTTCAGA
AAATGGAACTGGAAATTGAAAAGGAACGCCTTCAGCAACTCCTGGCCCAACAAGAGACAAAGCT
TCTCCTTAAACAGCAGCAGCTGCACCAATCCCGACTAGATTACAATTGGTTAAGAACTCAAGCT
GTGTTTAGATCTCGAGAACTGGTTGCTGATAAAGACTTTCCTAAACCTGGAAGTGACTCTGGAC
CAAGTTTATTGAAGCCGAAATGTGATGGATGGCTGCGTGGAACCTCATCGTCCTTCAGAAAGTG
CCCAGACTCTCCAAACAGTGCGCAAAACCAGAAGGAGAAGAAAACTGTTGAGTTTCAGTCACAC
GTGGAGAATGGCATTCAATGGACATGTCAACAGAATGACACATGCAGACTCCAGAGAGAGACAG
CAACTGGAGTTAGAAAAGATGCTTCCACATCTCCTATGTCAACACAAAGCCCTAAACACCCCCT
GACACCAGCCTCATCGTCATCCAAGCACAAAACCTCAAGGTATGAGACATCTCTGTTGGACTTG
GTTCAGTCTCTGAGCCCAAATTCTGCTCCTAAATGTCAGCCCCATTCCTCCAGAGCAGCAGGGA
CATGGAGTGCTCTCCGACCTACCCCTAAGACATCTACCTGGAAGAAAGTGGGGACACATAAGAG
CCCTGAGGACCTGGAGGAGAATCAGATTCTGGAAGACATATTTTTCATATGACTCTGAAGCACA
TGCTACAGAATTTCCACAGGAAATATTTGAGTTTCTTTCCATATTGATGTAGGATGTTAAACTG
AAAAGAAGCCGTGTCTCTCCTTTCGTGGAGACCTCTTGCTGGCATCCTTTTATAGTATTGAATA
TAGAAAGCATTCTTATAAATCAGGGTGGTTTTTGTCAGACCAGTTAGCAGAAACAGACTAAAGG
GGGTCACTTAGAGGTAGGATCTTTTCTATACCAAACAGAAATTAGAAATTGTGGATACTGCCTG
CATAGTAAAACCCATGAATGTCTAGTGTCATTTTAAGAGTGTTTTCAATTTACTACTGCAAAAA
GTTGACTCTTTACAGATGGAAAACGTTCCCATTGACAGACCCCTTAAATATGAAAGTAGCCACT
TCAGAAAGGCTCTTCTCTCCTCACCAATGCTAAGTGTGGCGCTTCATTCCGACGTTGAAGTTGG
TGACTCTAATATCATCTTACATGGGACCAATACTTGTGGGTCATAGTGGTCAACCGAGTCATTG
CCACCCCTTAAACCAAAAGGCTGAATGACTTAGAGGGAAGTTTGCAACCAGACAGTGGCATTAG
ACCACATGAGGGCATGGCCGCCTGGGGAAATTTACCAGTGTCCAGGCAGCCACCTCTCCAGTGT
TCCATGATGGGTGTTTCTTGTCGACTTCAGTGTTGTAAACTTTACCTGTGGTTGTGTCTGAGGA
AGATAGCACTAGAGGAAGAGTGGTGTCGAGTGGCTGCAGGCTGGCAGGTTCCTTCTGCCCCACC
TCACACCATAGGACGAGTATCCTCCTCTGAGCACCGTGGATGCAGAGTCTGAGAACGCTCTGCT
GATTACCCTTCTTGGCCCAGATCTAGATCTTTTCTCCTCAGGCTGAGCTCAGTGCTGTTGGTTC
TACTCAGGCTCCCTCCCAAGCTCATACTCTTCCTCTGAAGCAGCTGCAAGGGCAAGACTAATTA
CCCTTTGGAAATTTAAAGTTCATTGAAAATTCCAATTTTCTTTTCAAATTCAGCCTGAGAGTAA
CTAGAACAGACTTGTTCTACTTCAAAACACCTTTAGGATATGCCTTTGGAGGGGCAGAAATAGC
CATATTCTCAGTTGGGTTTCCAGAAACATCTTTTCTCTATCTTGTGTCAAAGACAGCTTAACTA
TACCTATTTCTTTACACCTGCTATAACCATAGTCACCGTTCTGAGCATCAGTAGTCTTACTACT
CCTGTATATCTCCAGAAGGAAAAGAAAGAGAATCTGATCTCCTTAAGAAGCTTATTTACAGGTA
GAAGAGTTGTAAACGGCCTAAAAATGAAAGCTTTTGTGCAGTGACATGCCAGTGAATAGAATTT
AATTGCTTCTTCACCAGCATGGGAAGTTTGGAAGAGAAAAAAGGGGGGTTTTCAGTCAGTACAC
TTTTTATACTTCACAGATCTGCCATGCGTTACCTTCTTCTCATGCATATACATACATACATACA
CACACACACACACACACACGGATATATATATATATATATATATATATATATATATATATATATA
TATCCTAGTGACTTTGTTATTAACCAAATAGTATATTGTGGCCCATCCCACAGAAGAATGGGAA
GAAAGTAGGAGCCATGTGCCTCCCTGGATAATGCTCTCTTCGGTGGTTGGTTGGGACTTGCTTG
GCCAGCTCCTAGATGTTTCCTCCAAGCAAAACTGCACTCAATGATAAAAATTTAGTTTAACAAG
ATTCACCAAGGTCACCAGATAGTAAGGAGCAATTCAAACCCAGAGGTGAAGATGGGGGGAAGGG
GAGTCATTGTTCTTTTCTTTACTTCTCTTTCCTATTTTGAGTAAATATCAAAACCATCAAGACC
ATTTTCTACAGTCCAGTTATTATTTATCAGACACATGGATTGGTAAGGAGAGGAGAGCAGTGGG
AAGAAGGGATTAAAGGAAACAGGCCTACATCCCTTTGCAGCCTTGGTACAATTCCTTATTGCAT
GCAGTTCTCTCATAAAGGAGAAGAGGACCAGAAGAGAGAAATGGAGATGGTGGGCTCTGGGACC
CTTCCACTGCTCCTTCCTCAGTGCCTTATCTGCAGTGTTTAATGTTTTTCTTCCAAATTTAAGA
TTTCTAACTCTCATACTTGGAAATACAAAGAACTCCCCAGGGCTTACAGGTCAAGGGGCACAGG
CCCTAGAGAGGCACATCAGGGCTCTCTGTCTCCAGCCCCATGTCCCTTTGCTGCATCAGCCGCC
TCCATTACCCTCTTCTTTGCTCCCCATTGCAGCTCACCACTGTTAGACACATCCCAATGGCACA
CTTCTCTTCCCAGGTCCTTCTGGGTGAATAACTTAAGACTAAGTTTTTACCACTTTGTGAAATT
TTCCTTATGTTCCTGGCACTGTGTACTGTTGACTCCAGTAAGATGTGCAGATATGTCCAACCCA
TAAGCCATAAGCTGTGACGTATGGTCAAGGATAGCTGTGAATGTGGCCCAACACAAAATTGTAA
ACGTAAGACATTTTGAGTAGTGTGGTTATTTTTGTTTTTCACTTTTGTGTGTGTGACTTGATTG
TGCAGCTCTCAAACATGAACATTGTATATAATAAATCATGTCATCATGTTGCTGTGTCAAAGGC
TGGCCATGCGGCAAGTCCAAGCCTCTGTGGTGGCCCTCCTCGTCATGCCACATTGTACTGGGTA
CTGTTTGCCTTTCTTGTTAGAGTTCCAGGTGTCCAGACTAACATATGCTATGTCGGAGAAGCCA
AGTTCACCATTTGTAACATACAGACATGCAGGTGAGTTATTGATACCTTCAGATAATGATAATT
CTACCTGCAGTTTTAGGCCTTATCTGCTGACCTAGCCCTAAAAGCCTAGACCAGAGAAAAGCTA
GAATGAGAAGGTCAAAGTTCCCAAGAATGTGAAGCTGACAGTTGGGGGGCACTGAGACCCATCT
CCTTAGAACATGGGGCAACCAACAGACCCAAAGGCAGGGAGCAGAGTCAGTGTTAGAACAGTAC
AGAGCTGGTTGACCAGAACAGTTTCATTCCAGAGCTGACACCCCTCTGCCCTCTGTGGTCTGAC
ACCTGATTGGCTCATGCCAAGCAAGCACTAGCACAAACATTGCCCACAGTGACTCCCACCCAGA
AGCTCCCTCTTTCTCTTCCCCAGATGCTGCCCCACACTCTCCTCCACACTCTTTCCAGCTCTAG
GTCCTAAGGTGGCCAGGAGGCTGCTGAGATGAGGGAGACCATGCTGTATCCCAGGGAAATGGGG
TGAGCCCTTAGTTTTCAAACCTCCTCTGAGAGATTTTAACTTGTTGGATTTATGTAGCATTGGA
AAATGATAAACTGTATGAATTTTCTGTATTTTCCATGGACAGTTATTTATGGAGGGGCGTTTTT
AACTCAAGTGCTAGAAATGTTAAATCATCATAATAAATTCATGCTATTCAGA

hide sequence

RefSeq Acc Id:

XM_039097026 ⟹ XP_038952954

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	18	16,489,625 - 16,748,774 (+)	NCBI

RefSeq Acc Id:

XM_039097027 ⟹ XP_038952955

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	18	16,489,625 - 16,722,296 (+)	NCBI

RefSeq Acc Id:

XM_039097028 ⟹ XP_038952956

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	18	16,489,625 - 16,706,575 (+)	NCBI

RefSeq Acc Id:

XM_039097029 ⟹ XP_038952957

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	18	16,489,814 - 16,776,373 (+)	NCBI

RefSeq Acc Id:

XM_039097030 ⟹ XP_038952958

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	18	16,489,814 - 16,776,373 (+)	NCBI

RefSeq Acc Id:

XM_039097031 ⟹ XP_038952959

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	18	16,489,814 - 16,776,373 (+)	NCBI

RefSeq Acc Id:

XM_039097032 ⟹ XP_038952960

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	18	16,489,814 - 16,776,373 (+)	NCBI

RefSeq Acc Id:

XM_039097033 ⟹ XP_038952961

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	18	16,496,772 - 16,776,373 (+)	NCBI

RefSeq Acc Id:

XM_039097034 ⟹ XP_038952962

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	18	16,516,843 - 16,776,373 (+)	NCBI

RefSeq Acc Id:

XM_039097035 ⟹ XP_038952963

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	18	16,489,840 - 16,776,373 (+)	NCBI

RefSeq Acc Id:

XM_039097036 ⟹ XP_038952964

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	18	16,534,229 - 16,776,373 (+)	NCBI

Protein Sequences


Protein RefSeqs	NP_001128079	(Get FASTA)	NCBI Sequence Viewer
	XP_003751804	(Get FASTA)	NCBI Sequence Viewer
	XP_017456500	(Get FASTA)	NCBI Sequence Viewer
	XP_017456501	(Get FASTA)	NCBI Sequence Viewer
	XP_038952954	(Get FASTA)	NCBI Sequence Viewer
	XP_038952955	(Get FASTA)	NCBI Sequence Viewer
	XP_038952956	(Get FASTA)	NCBI Sequence Viewer
	XP_038952957	(Get FASTA)	NCBI Sequence Viewer
	XP_038952958	(Get FASTA)	NCBI Sequence Viewer
	XP_038952959	(Get FASTA)	NCBI Sequence Viewer
	XP_038952960	(Get FASTA)	NCBI Sequence Viewer
	XP_038952961	(Get FASTA)	NCBI Sequence Viewer
	XP_038952962	(Get FASTA)	NCBI Sequence Viewer
	XP_038952963	(Get FASTA)	NCBI Sequence Viewer
	XP_038952964	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAI66863	(Get FASTA)	NCBI Sequence Viewer
	EDL76147	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:

NP_001128079 ⟸ NM_001134607

- UniProtKB:

F1LT68 (UniProtKB/TrEMBL), A6J2L5 (UniProtKB/TrEMBL), A0A8I5ZMY6 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MESLKGAGDSVAEQSFCKRGLKSASLKDLCVEDKRRIANLIKELARVSEEKEVTEERLKTEQES
FEKKIRQLEEQNELIIKEREDILLKYRECQELLSLYQKYLSEQQEKLTMSLSELGAARAQEQQI
TKKKITHQSSLVNLDGSYLSVAKPQTCQTRARPKSENQDSASESHTALRNNSLKPVTLHHPKQD
LERMSTETRTCTYESPGRRLINAAPVEEALPEELKIKDYPNLLPTPSSQYCGHKYSESEAYVHE
NYHPTNMASQCCKTHPESCSHCRMSWASLMHDGVTLQPRETDIEKQLSEDRRQQLMLQKMELEI
EKERLQQLLAQQETKLLLKQQQLHQSRLDYNCLLKPKCDGWLRGTSSSFRKCPDSPNSAQNQKE
KKTVEFQSHVENGIQWTCQQNDTCRLQRETATGVRKDASTSPMSTQSPKHPLTPASSSSKHKTS
RYETSLLDLVQSLSPNSAPKCQPHSSRAAGTWSALRPTPKTSTWKKVGTHKSPEDLEENQILED
IFFI

hide sequence

RefSeq Acc Id:	XP_003751804 ⟸ XM_003751756
- Peptide Label:	isoform X1
- UniProtKB:	A0A8I6G470 (UniProtKB/TrEMBL), F1LT68 (UniProtKB/TrEMBL)
- Sequence:	show sequence MGGPGGFGSSGSAGRSFPRPWPGPHFTSPQPRLTSARSLSPRRGRRRKRGRASAPSGQWGRSLA VGAWRPRLDASSGGCFKMAGAAGPSLPGSAFWSRDFSDEEQSVVYVPGISTERNTRSRLKLINP KVDAKVKVPKVTDIPASMESLKGAGDSVAEQSFCKRGLKSASLKDLCVEDKRRIANLIKELARV SEEKEVTEERLKTEQESFEKKIRQLEEQNELIIKEREALQLQYRECQELLSLYQKYLSEQQEKL TMSLSELGAARAQEQQITKKKITHQSSLVNLDGSYLSVAKPQTCQTRARPKSENQDSASESHTA LRNNSLKPVTLHHPKQDLERMSTETRTCTYESPGRRLINAAPVEEALPEELKIKDYPNLLPTPS SQYCGHKYSESEAYVHENYHPTNMASQCCKTHPESCSHCRMSWASLMHDGVTLQPRETDIEKQL SEDRRQQLMLQKMELEIEKERLQQLLAQQETKLLLKQQQLHQSRLDYNWLRTQAVFRSRELVAD KDFPKPGSDSGPSLLKPKCDGWLRGTSSSFRKCPDSPNSAQNQKEKKTVEFQSHVENGIQWTCQ QNDTCRLQRETATGVRKDASTSPMSTQSPKHPLTPASSSSKHKTSRYETSLLDLVQSLSPNSAP KCQPHSSRAAGTWSALRPTPKTSTWKKVGTHKSPEDLEENQILEDIFFI hide sequence

RefSeq Acc Id:	XP_017456501 ⟸ XM_017601012
- Peptide Label:	isoform X5
- UniProtKB:	F1LT68 (UniProtKB/TrEMBL)
- Sequence:	show sequence MVTGISTERNTRSRLKLINPKVDAKVKVPKVTDIPASMESLKGAGDSVAEQSFCKRGLKSASLK DLCVEDKRRIANLIKELARVSEEKEVTEERLKTEQESFEKKIRQLEEQNELIIKEREALQLQYR ECQELLSLYQKYLSEQQEKLTMSLSELGAARAQEQQITKKKITHQSSLVNLDGSYLSVAKPQTC QTRARPKSENQDSASESHTALRNNSLKPVTLHHPKQDLERMSTETRTCTYESPGRRLINAAPVE EALPEELKIKDYPNLLPTPSSQYCGHKYSESEAYVHENYHPTNMASQCCKTHPESCSHCRMSWA SLMHDGVTLQPRETDIEKQLSEDRRQQLMLQKMELEIEKERLQQLLAQQETKLLLKQQQLHQSR LDYNWLRTQAVFRSRELVADKDFPKPGSDSGPSLLKPKCDGWLRGTSSSFRKCPDSPNSAQNQK EKKTVEFQSHVENGIQWTCQQNDTCRLQRETATGVRKDASTSPMSTQSPKHPLTPASSSSKHKT SRYETSLLDLVQSLSPNSAPKCQPHSSRAAGTWSALRPTPKTSTWKKVGTHKSPEDLEENQILE DIFFI hide sequence

RefSeq Acc Id:	XP_017456500 ⟸ XM_017601011
- Peptide Label:	isoform X2
- UniProtKB:	F1LT68 (UniProtKB/TrEMBL)
- Sequence:	show sequence MGGPGGFGSSGSAGRSFPRPWPGPHFTSPQPRLTSARSLSPRRGRRRKRGRASAPSGQWGRSLA VGAWRPRLDASSGGCFKMAGAAGPSLPGSAFWSRDFSDEEQSVVYVPGISTERNTRSRLKLINP KVDAKVKVPKVTDIPASMESLKGAGDSVAEQSFCKRGLKSASLKDLCVEDKRRIANLIKELARV SEEKEVTEERLKTEQESFEKKIRQLEEQNELIIKEREALQLQYRECQELLSLYQKYLSEQQEKL TMSLSELGAARAQEQQITKKKITHQSSLVNLDGSYLSVAKPQTCQTRARPKSENQDSASESHTA LRNNSLKPVTLHHPKQDLERMSTETRTCTYESPGRRLINAAPVEEALPEELKIKDYPNLLPTPS SQYCGHKYSESEAYVHENYHPTNMASQCCKTHPESCSHCRMSWASLMHDGVTLQPRETDIEKQL SEDRRQQLMLQKMELEIEKERLQQLLAQQETKLLLKQQQLHQSRLDYNCLLKPKCDGWLRGTSS SFRKCPDSPNSAQNQKEKKTVEFQSHVENGIQWTCQQNDTCRLQRETATGVRKDASTSPMSTQS PKHPLTPASSSSKHKTSRYETSLLDLVQSLSPNSAPKCQPHSSRAAGTWSALRPTPKTSTWKKV GTHKSPEDLEENQILEDIFFI hide sequence

RefSeq Acc Id:

ENSRNOP00000048010 ⟸ ENSRNOT00000045150

RefSeq Acc Id:

ENSRNOP00000069550 ⟸ ENSRNOT00000078870

RefSeq Acc Id:	XP_038952954 ⟸ XM_039097026
- Peptide Label:	isoform X3
- UniProtKB:	F1LT68 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038952955 ⟸ XM_039097027
- Peptide Label:	isoform X4
- UniProtKB:	F1LT68 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038952956 ⟸ XM_039097028
- Peptide Label:	isoform X6

RefSeq Acc Id:	XP_038952957 ⟸ XM_039097029
- Peptide Label:	isoform X7
- UniProtKB:	A0A8I5ZMY6 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038952958 ⟸ XM_039097030
- Peptide Label:	isoform X7
- UniProtKB:	A0A8I5ZMY6 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038952959 ⟸ XM_039097031
- Peptide Label:	isoform X7
- UniProtKB:	A0A8I5ZMY6 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038952960 ⟸ XM_039097032
- Peptide Label:	isoform X7
- UniProtKB:	A0A8I5ZMY6 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038952963 ⟸ XM_039097035
- Peptide Label:	isoform X8

RefSeq Acc Id:	XP_038952961 ⟸ XM_039097033
- Peptide Label:	isoform X8

RefSeq Acc Id:	XP_038952962 ⟸ XM_039097034
- Peptide Label:	isoform X8

RefSeq Acc Id:	XP_038952964 ⟸ XM_039097036
- Peptide Label:	isoform X8

RefSeq Acc Id:

ENSRNOP00000080158 ⟸ ENSRNOT00000103230

RefSeq Acc Id:

ENSRNOP00000079204 ⟸ ENSRNOT00000116047

RefSeq Acc Id:

ENSRNOP00000088715 ⟸ ENSRNOT00000103608

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-F1LT68-F1-model_v2	AlphaFold	F1LT68	1-516	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1562608	AgrOrtholog
BioCyc Gene	G2FUF-8138	BioCyc
Ensembl Genes	ENSRNOG00000029466	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Protein	ENSRNOP00000048010	ENTREZGENE
	ENSRNOP00000048010.5	UniProtKB/TrEMBL
	ENSRNOP00000069550.1	UniProtKB/TrEMBL
	ENSRNOP00000079204	ENTREZGENE
	ENSRNOP00000079204.1	UniProtKB/TrEMBL
	ENSRNOP00000080158	ENTREZGENE
	ENSRNOP00000080158.1	UniProtKB/TrEMBL
	ENSRNOP00000088715.1	UniProtKB/TrEMBL
Ensembl Transcript	ENSRNOT00000045150	ENTREZGENE
	ENSRNOT00000045150.5	UniProtKB/TrEMBL
	ENSRNOT00000078870.2	UniProtKB/TrEMBL
	ENSRNOT00000103230	ENTREZGENE
	ENSRNOT00000103230.1	UniProtKB/TrEMBL
	ENSRNOT00000103608.1	UniProtKB/TrEMBL
	ENSRNOT00000116047	ENTREZGENE
	ENSRNOT00000116047.1	UniProtKB/TrEMBL
InterPro	Hinderin	UniProtKB/TrEMBL
KEGG Report	rno:498831	UniProtKB/TrEMBL
NCBI Gene	498831	ENTREZGENE
PANTHER	PROTEIN HINDERIN	UniProtKB/TrEMBL
	PTHR28375	UniProtKB/TrEMBL
Pfam	KIAA1328	UniProtKB/TrEMBL
PhenoGen	Kiaa1328	PhenoGen
UniProt	A0A8I5ZMY6	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I6G470	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I6GHC9_RAT	UniProtKB/TrEMBL
	A6J2L5	ENTREZGENE, UniProtKB/TrEMBL
	B2RYQ4_RAT	UniProtKB/TrEMBL
	F1LT68	ENTREZGENE, UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2023-09-19	Kiaa1328	KIAA1328 homolog	RGD1562608	similar to KIAA1328 protein	Symbol and Name Changed	1299863	APPROVED
2021-03-09	RGD1562608	similar to KIAA1328 protein	LOC102554494	uncharacterized LOC102554494	Data Merged	737654	PROVISIONAL
2015-11-04	RGD1562608	similar to KIAA1328 protein	RGD1564140	similar to AW554918 protein	Data Merged	737654	APPROVED
2013-12-17	LOC102554494	uncharacterized LOC102554494			Symbol and Name status set to provisional	70820	PROVISIONAL
2008-04-30	RGD1564140	similar to AW554918 protein	RGD1564140_predicted	similar to AW554918 protein (predicted)	'predicted' is removed	2292626	APPROVED
2008-04-30	RGD1562608	similar to KIAA1328 protein	RGD1562608_predicted	similar to KIAA1328 protein (predicted)	'predicted' is removed	2292626	APPROVED
2006-03-07	RGD1564140_predicted	similar to AW554918 protein (predicted)	LOC498832	similar to AW554918 protein	Symbol and Name status set to approved	1299863	APPROVED
2006-03-07	RGD1562608_predicted	similar to KIAA1328 protein (predicted)	LOC498831	similar to KIAA1328 protein	Symbol and Name status set to approved	1299863	APPROVED
2006-02-09	LOC498832	similar to AW554918 protein			Symbol and Name status set to provisional	70820	PROVISIONAL
2006-02-09	LOC498831	similar to KIAA1328 protein			Symbol and Name status set to provisional	70820	PROVISIONAL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - ClinVar