Kiaa1328 (KIAA1328 homolog) - Rat Genome Database

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Gene: Kiaa1328 (KIAA1328 homolog) Rattus norvegicus
Analyze
Symbol: Kiaa1328 (Ensembl: RGD1562608)
Name: KIAA1328 homolog (Ensembl:similar to KIAA1328 protein)
RGD ID: 1562608
Description: Orthologous to human KIAA1328 (KIAA1328); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 2,5-hexanedione; 6-propyl-2-thiouracil.
Type: protein-coding
RefSeq Status: PROVISIONAL
Previously known as: hypothetical protein LOC498831; LOC102554494; LOC498831; LOC498832; MGC188779; RGD1562608; RGD1564140; similar to AW554918 protein; similar to KIAA1328 protein; uncharacterized LOC102554494; uncharacterized protein KIAA1328 homolog; uncharacterized protein LOC498831
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: mRatBN7.2 - mRatBN7.2 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81816,762,421 - 17,061,439 (+)NCBIGRCr8
mRatBN7.21816,488,569 - 16,776,373 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1816,489,408 - 16,775,548 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1816,682,654 - 16,953,769 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01817,465,314 - 17,736,441 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01816,744,586 - 17,018,482 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01817,394,586 - 17,678,605 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1817,403,407 - 17,676,049 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01817,149,133 - 17,432,367 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41817,205,204 - 17,333,938 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera1816,407,003 - 16,676,223 (+)NCBICelera
Cytogenetic Map18p12NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:12477932  


Genomics

Comparative Map Data
Kiaa1328
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81816,762,421 - 17,061,439 (+)NCBIGRCr8
mRatBN7.21816,488,569 - 16,776,373 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1816,489,408 - 16,775,548 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1816,682,654 - 16,953,769 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01817,465,314 - 17,736,441 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01816,744,586 - 17,018,482 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01817,394,586 - 17,678,605 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1817,403,407 - 17,676,049 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01817,149,133 - 17,432,367 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41817,205,204 - 17,333,938 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera1816,407,003 - 16,676,223 (+)NCBICelera
Cytogenetic Map18p12NCBI
KIAA1328
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381836,829,127 - 37,232,172 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1836,829,106 - 37,232,172 (+)EnsemblGRCh38hg38GRCh38
GRCh371834,409,090 - 34,812,135 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361832,663,078 - 33,059,286 (+)NCBINCBI36Build 36hg18NCBI36
Build 341832,663,077 - 33,059,285NCBI
Celera1831,218,516 - 31,615,191 (+)NCBICelera
Cytogenetic Map18q12.2NCBI
HuRef1831,267,966 - 31,664,168 (+)NCBIHuRef
CHM1_11834,336,097 - 34,732,301 (+)NCBICHM1_1
T2T-CHM13v2.01837,022,186 - 37,425,243 (+)NCBIT2T-CHM13v2.0
AW554918
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391825,301,825 - 25,600,378 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1825,302,056 - 25,600,378 (+)EnsemblGRCm39 Ensembl
GRCm381825,168,730 - 25,467,321 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1825,168,999 - 25,467,321 (+)EnsemblGRCm38mm10GRCm38
MGSCv371825,327,521 - 25,625,822 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361825,312,030 - 25,433,918 (+)NCBIMGSCv36mm8
Celera1825,654,554 - 25,953,134 (+)NCBICelera
Cytogenetic Map18A2NCBI
cM Map1813.74NCBI
Kiaa1328
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495540223,306,672 - 23,589,057 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495540223,298,244 - 23,591,420 (+)NCBIChiLan1.0ChiLan1.0
KIAA1328
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21754,223,409 - 54,617,099 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11839,913,490 - 40,309,688 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01830,081,706 - 30,477,445 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11833,639,555 - 34,034,686 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1833,639,535 - 34,031,582 (+)Ensemblpanpan1.1panPan2
KIAA1328
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1753,022,077 - 53,400,208 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl753,027,322 - 53,291,418 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha752,437,973 - 52,815,527 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0752,982,184 - 53,359,821 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl752,986,764 - 53,359,936 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1752,677,622 - 53,043,140 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0752,695,459 - 53,066,979 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0752,982,015 - 53,359,597 (-)NCBIUU_Cfam_GSD_1.0
Kiaa1328
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494448,992,660 - 49,245,123 (-)NCBIHiC_Itri_2
SpeTri2.0NW_0049365178,320,062 - 8,572,408 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
KIAA1328
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl6120,670,342 - 121,035,931 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.16120,670,317 - 121,035,937 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.26113,547,251 - 113,806,703 (+)NCBISscrofa10.2Sscrofa10.2susScr3
KIAA1328
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11843,653,351 - 44,004,935 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1843,656,406 - 43,998,882 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366605018,199,362 - 18,552,851 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Kiaa1328
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_00462477911,107,359 - 11,428,028 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Kiaa1328
1348 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:501
Count of miRNA genes:248
Interacting mature miRNAs:304
Transcripts:ENSRNOT00000045150
Prediction methods:Microtar, Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
2301410Bp317Blood pressure QTL 3170.004arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)181194427326548295Rat
1358358Sradr6Stress Responsive Adrenal Weight QTL 62.49adrenal gland mass (VT:0010420)both adrenal glands wet weight (CMO:0000164)181194429959330563Rat
61382Bp46Blood pressure QTL 4618.8arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)181194179131393320Rat
8552968Pigfal19Plasma insulin-like growth factor 1 level QTL 1911.4blood insulin-like growth factor amount (VT:0010479)plasma insulin-like growth factor 1 level (CMO:0001299)18125758124Rat
61388Bp2Blood pressure QTL 23.23arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)18135374722Rat
1331781Scl28Serum cholesterol level QTL 283.995blood HDL cholesterol amount (VT:0000184)serum high density lipoprotein cholesterol level (CMO:0000361)181194429924797117Rat
6903359Bp355Blood pressure QTL 3553.6arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)181194454459796478Rat
2313082Bss85Bone structure and strength QTL 850.80.0001long bone metaphysis morphology trait (VT:0000133)tibia midshaft total cross-sectional area (CMO:0001715)181495133759951337Rat
2312568Glom21Glomerulus QTL 2120.005kidney glomerulus morphology trait (VT:0005325)index of glomerular damage (CMO:0001135)18518585840503530Rat
1331766Bp236Blood pressure QTL 2363.022arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)181194429931359530Rat
631264Scl22Serum cholesterol level QTL 226.2blood cholesterol amount (VT:0000180)serum total cholesterol level (CMO:0000363)181194179131393320Rat
12904680Bw189Body weight QTL 1890.019body mass (VT:0001259)body weight (CMO:0000012)181194427326548295Rat
2293708Bss46Bone structure and strength QTL 468.80.0001lumbar vertebra morphology trait (VT:0010494)lumbar vertebra cortical cross-sectional area (CMO:0001690)181179151863636873Rat
1641910Colcr3Colorectal carcinoma resistance QTL 35.020.000007intestine integrity trait (VT:0010554)poorly differentiated malignant colorectal tumor number (CMO:0002076)18224947722066430Rat
12904693Am20Aortic mass QTL 200.001aorta mass (VT:0002845)aorta weight to aorta length to body weight ratio (CMO:0002722)181194427326548295Rat
9589153Insul31Insulin level QTL 317.150.05blood insulin amount (VT:0001560)plasma insulin level (CMO:0000342)18142547119Rat
1578667Bss21Bone structure and strength QTL 213.5femur morphology trait (VT:0000559)femoral neck cortical cross-sectional area (CMO:0001702)181179151883218561Rat
12904695Kidm73Kidney mass QTL 730.001kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)181194427326548295Rat
2312598Bp340Blood pressure QTL 3400.05arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)18130558703Rat
12904689Cm128Cardiac mass QTL 1280.001heart mass (VT:0007028)heart wet weight to body weight ratio (CMO:0002408)181194427326548295Rat
12904690Cm129Cardiac mass QTL 1290.001heart left ventricle mass (VT:0007031)heart left ventricle weight to body weight ratio (CMO:0000530)181194427326548295Rat
2300180Bmd67Bone mineral density QTL 674.80.0001femur mineral mass (VT:0010011)bone mineral density (CMO:0001226)18134291613Rat
12904691Cm130Cardiac mass QTL 1300.001heart right ventricle mass (VT:0007033)heart right ventricle weight to body weight ratio (CMO:0000914)181194427326548295Rat
9590248Scort10Serum corticosterone level QTL 1019.710.001blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)18125758124Rat
2299160Iddm35Insulin dependent diabetes mellitus QTL 352.79blood glucose amount (VT:0000188)age at onset/diagnosis of type 1 diabetes mellitus (CMO:0001140)18420794160377792Rat
1578661Bss20Bone structure and strength QTL 203.7femur morphology trait (VT:0000559)femoral neck cross-sectional area (CMO:0001697)181179151883218561Rat
1331753Bp231Blood pressure QTL 2313.643arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)181194429952293055Rat
2293661Bss50Bone structure and strength QTL 504.640.0003lumbar vertebra size trait (VT:0010518)lumbar vertebra trabecular cross-sectional area (CMO:0001692)18134291613Rat
61375Bp41Blood pressure QTL 412.4blood pressure trait (VT:0000183)systolic blood pressure (CMO:0000004)181194429941122201Rat

Markers in Region
D18Chm7  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21816,758,934 - 16,759,137 (+)MAPPERmRatBN7.2
Rnor_6.01817,661,173 - 17,661,373NCBIRnor6.0
Rnor_5.01817,415,071 - 17,415,271UniSTSRnor5.0
RGSC_v3.41817,318,631 - 17,318,831UniSTSRGSC3.4
Celera1816,662,064 - 16,662,255UniSTS
Cytogenetic Map18p12UniSTS
RH144313  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21816,706,240 - 16,706,413 (+)MAPPERmRatBN7.2
Rnor_6.01817,609,809 - 17,609,981NCBIRnor6.0
Rnor_5.01817,363,707 - 17,363,879UniSTSRnor5.0
RGSC_v3.41817,265,940 - 17,266,112UniSTSRGSC3.4
Celera1816,609,380 - 16,609,552UniSTS
RH 3.4 Map18192.4UniSTS
Cytogenetic Map18p12UniSTS
RH141581  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21816,520,969 - 16,521,163 (+)MAPPERmRatBN7.2
mRatBN7.21211,317,019 - 11,317,213 (-)MAPPERmRatBN7.2
mRatBN7.21211,317,019 - 11,317,213 (+)MAPPERmRatBN7.2
mRatBN7.21816,520,969 - 16,521,163 (-)MAPPERmRatBN7.2
Rnor_6.01817,428,863 - 17,429,056NCBIRnor6.0
Rnor_6.01213,370,553 - 13,370,746NCBIRnor6.0
Rnor_5.01215,411,303 - 15,411,496UniSTSRnor5.0
Rnor_5.01817,182,865 - 17,183,058UniSTSRnor5.0
RGSC_v3.41817,099,133 - 17,099,326UniSTSRGSC3.4
RGSC_v3.41211,677,551 - 11,677,744UniSTSRGSC3.4
Celera1213,110,368 - 13,110,561UniSTS
Celera1816,431,882 - 16,432,075UniSTS
Cytogenetic Map18p12UniSTS
Cytogenetic Map12p11UniSTS


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system appendage
High
Medium 6 1 10 1 12 8
Low 3 43 47 37 18 37 8 10 64 34 29 3 8
Below cutoff 4 4 4 1

Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001134607 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_003751756 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017601011 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017601012 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039097027 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039097028 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039097029 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039097030 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039097031 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039097032 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039097033 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039097034 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039097035 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039097036 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063277515 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063277516 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide BC166863 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH473974 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAXUCZ010000018 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

RefSeq Acc Id: ENSRNOT00000045150   ⟹   ENSRNOP00000048010
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1816,489,880 - 16,773,817 (+)Ensembl
Rnor_6.0 Ensembl1817,403,407 - 17,676,049 (+)Ensembl
RefSeq Acc Id: ENSRNOT00000078870   ⟹   ENSRNOP00000069550
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1816,645,883 - 16,703,363 (+)Ensembl
Rnor_6.0 Ensembl1817,550,350 - 17,607,108 (+)Ensembl
RefSeq Acc Id: ENSRNOT00000103230   ⟹   ENSRNOP00000080158
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1816,489,408 - 16,773,817 (+)Ensembl
RefSeq Acc Id: ENSRNOT00000103608   ⟹   ENSRNOP00000088715
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1816,489,880 - 16,775,548 (+)Ensembl
RefSeq Acc Id: ENSRNOT00000116047   ⟹   ENSRNOP00000079204
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1816,501,199 - 16,773,817 (+)Ensembl
RefSeq Acc Id: NM_001134607   ⟹   NP_001128079
RefSeq Status: PROVISIONAL
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81816,770,799 - 17,048,523 (+)NCBI
mRatBN7.21816,496,091 - 16,773,817 (+)NCBI
Rnor_6.01817,403,407 - 17,676,049 (+)NCBI
Rnor_5.01817,149,133 - 17,432,367 (+)NCBI
RGSC_v3.41817,205,204 - 17,333,938 (+)RGD
Celera1816,407,003 - 16,676,223 (+)RGD
Sequence:
RefSeq Acc Id: XM_003751756   ⟹   XP_003751804
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81816,764,369 - 17,061,439 (+)NCBI
mRatBN7.21816,489,625 - 16,776,373 (+)NCBI
Rnor_6.01817,396,951 - 17,678,605 (+)NCBI
Rnor_5.01817,149,133 - 17,432,367 (+)NCBI
Sequence:
RefSeq Acc Id: XM_017601011   ⟹   XP_017456500
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81816,764,369 - 17,061,439 (+)NCBI
mRatBN7.21816,489,625 - 16,776,373 (+)NCBI
Rnor_6.01817,396,951 - 17,678,605 (+)NCBI
Sequence:
RefSeq Acc Id: XM_017601012   ⟹   XP_017456501
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81816,762,421 - 17,061,439 (+)NCBI
mRatBN7.21816,488,569 - 16,776,373 (+)NCBI
Rnor_6.01817,394,586 - 17,678,605 (+)NCBI
Sequence:
RefSeq Acc Id: XM_039097027   ⟹   XP_038952955
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81816,764,369 - 16,984,336 (+)NCBI
mRatBN7.21816,489,625 - 16,722,296 (+)NCBI
RefSeq Acc Id: XM_039097028   ⟹   XP_038952956
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81816,764,369 - 16,981,278 (+)NCBI
mRatBN7.21816,489,625 - 16,706,575 (+)NCBI
RefSeq Acc Id: XM_039097029   ⟹   XP_038952957
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81816,765,527 - 17,061,439 (+)NCBI
mRatBN7.21816,489,814 - 16,776,373 (+)NCBI
RefSeq Acc Id: XM_039097030   ⟹   XP_038952958
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81816,765,527 - 17,061,439 (+)NCBI
mRatBN7.21816,489,814 - 16,776,373 (+)NCBI
RefSeq Acc Id: XM_039097031   ⟹   XP_038952959
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81816,764,945 - 17,061,439 (+)NCBI
mRatBN7.21816,489,814 - 16,776,373 (+)NCBI
RefSeq Acc Id: XM_039097032   ⟹   XP_038952960
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81816,764,747 - 17,061,439 (+)NCBI
mRatBN7.21816,489,814 - 16,776,373 (+)NCBI
RefSeq Acc Id: XM_039097033   ⟹   XP_038952961
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81816,771,471 - 17,061,439 (+)NCBI
mRatBN7.21816,496,772 - 16,776,373 (+)NCBI
RefSeq Acc Id: XM_039097034   ⟹   XP_038952962
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81816,776,653 - 17,061,439 (+)NCBI
mRatBN7.21816,516,843 - 16,776,373 (+)NCBI
RefSeq Acc Id: XM_039097035   ⟹   XP_038952963
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81816,764,548 - 17,061,439 (+)NCBI
mRatBN7.21816,489,840 - 16,776,373 (+)NCBI
RefSeq Acc Id: XM_039097036   ⟹   XP_038952964
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81816,795,137 - 17,061,439 (+)NCBI
mRatBN7.21816,534,229 - 16,776,373 (+)NCBI
RefSeq Acc Id: XM_063277515   ⟹   XP_063133585
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81816,764,369 - 16,996,997 (+)NCBI
RefSeq Acc Id: XM_063277516   ⟹   XP_063133586
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81816,764,369 - 16,886,990 (+)NCBI
RefSeq Acc Id: NP_001128079   ⟸   NM_001134607
- UniProtKB: A6J2L5 (UniProtKB/TrEMBL),   A0A8I5ZMY6 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_003751804   ⟸   XM_003751756
- Peptide Label: isoform X1
- UniProtKB: A0A8I6G470 (UniProtKB/TrEMBL),   F1LT68 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_017456501   ⟸   XM_017601012
- Peptide Label: isoform X5
- UniProtKB: F1LT68 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_017456500   ⟸   XM_017601011
- Peptide Label: isoform X2
- UniProtKB: F1LT68 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSRNOP00000048010   ⟸   ENSRNOT00000045150
RefSeq Acc Id: ENSRNOP00000069550   ⟸   ENSRNOT00000078870
RefSeq Acc Id: XP_038952955   ⟸   XM_039097027
- Peptide Label: isoform X4
- UniProtKB: F1LT68 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038952956   ⟸   XM_039097028
- Peptide Label: isoform X6
RefSeq Acc Id: XP_038952957   ⟸   XM_039097029
- Peptide Label: isoform X7
- UniProtKB: A0A8I5ZMY6 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038952958   ⟸   XM_039097030
- Peptide Label: isoform X7
- UniProtKB: A0A8I5ZMY6 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038952959   ⟸   XM_039097031
- Peptide Label: isoform X7
- UniProtKB: A0A8I5ZMY6 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038952960   ⟸   XM_039097032
- Peptide Label: isoform X7
- UniProtKB: A0A8I5ZMY6 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038952963   ⟸   XM_039097035
- Peptide Label: isoform X8
RefSeq Acc Id: XP_038952961   ⟸   XM_039097033
- Peptide Label: isoform X8
RefSeq Acc Id: XP_038952962   ⟸   XM_039097034
- Peptide Label: isoform X8
RefSeq Acc Id: XP_038952964   ⟸   XM_039097036
- Peptide Label: isoform X8
RefSeq Acc Id: ENSRNOP00000080158   ⟸   ENSRNOT00000103230
RefSeq Acc Id: ENSRNOP00000079204   ⟸   ENSRNOT00000116047
RefSeq Acc Id: ENSRNOP00000088715   ⟸   ENSRNOT00000103608
RefSeq Acc Id: XP_063133585   ⟸   XM_063277515
- Peptide Label: isoform X3
- UniProtKB: F1LT68 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063133586   ⟸   XM_063277516
- Peptide Label: isoform X9

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-F1LT68-F1-model_v2 AlphaFold F1LT68 1-516 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen


Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1562608 AgrOrtholog
BioCyc Gene G2FUF-8138 BioCyc
Ensembl Genes ENSRNOG00000029466 Ensembl, UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000045150.5 UniProtKB/TrEMBL
  ENSRNOT00000078870.2 UniProtKB/TrEMBL
  ENSRNOT00000103230.1 UniProtKB/TrEMBL
  ENSRNOT00000103608.1 UniProtKB/TrEMBL
  ENSRNOT00000116047.1 UniProtKB/TrEMBL
InterPro Hinderin UniProtKB/TrEMBL
KEGG Report rno:498831 UniProtKB/TrEMBL
NCBI Gene 498831 ENTREZGENE
PANTHER PROTEIN HINDERIN UniProtKB/TrEMBL
  PTHR28375 UniProtKB/TrEMBL
Pfam KIAA1328 UniProtKB/TrEMBL
PhenoGen Kiaa1328 PhenoGen
RatGTEx ENSRNOG00000029466 RatGTEx
UniProt A0A8I5ZMY6 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I6G470 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I6GHC9_RAT UniProtKB/TrEMBL
  A6J2L5 ENTREZGENE, UniProtKB/TrEMBL
  B2RYQ4_RAT UniProtKB/TrEMBL
  F1LT68 ENTREZGENE, UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2023-09-19 Kiaa1328  KIAA1328 homolog  RGD1562608  similar to KIAA1328 protein  Symbol and Name Changed 1299863 APPROVED
2021-03-09 RGD1562608  similar to KIAA1328 protein  LOC102554494  uncharacterized LOC102554494  Data merged from RGD:7562104 737654 PROVISIONAL
2015-11-04 RGD1562608  similar to KIAA1328 protein  RGD1564140  similar to AW554918 protein  Data merged from RGD:1564140 737654 APPROVED
2013-12-17 LOC102554494  uncharacterized LOC102554494      Symbol and Name status set to provisional 70820 PROVISIONAL
2008-04-30 RGD1564140  similar to AW554918 protein   RGD1564140_predicted  similar to AW554918 protein (predicted)  'predicted' is removed 2292626 APPROVED
2008-04-30 RGD1562608  similar to KIAA1328 protein   RGD1562608_predicted  similar to KIAA1328 protein (predicted)  'predicted' is removed 2292626 APPROVED
2006-03-07 RGD1564140_predicted  similar to AW554918 protein (predicted)  LOC498832  similar to AW554918 protein  Symbol and Name status set to approved 1299863 APPROVED
2006-03-07 RGD1562608_predicted  similar to KIAA1328 protein (predicted)  LOC498831  similar to KIAA1328 protein  Symbol and Name status set to approved 1299863 APPROVED
2006-02-09 LOC498832  similar to AW554918 protein      Symbol and Name status set to provisional 70820 PROVISIONAL
2006-02-09 LOC498831  similar to KIAA1328 protein      Symbol and Name status set to provisional 70820 PROVISIONAL