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Gene: Atp11b (ATPase phospholipid transporting 11B (putative)) Rattus norvegicus
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Symbol: Atp11b
Name: ATPase phospholipid transporting 11B (putative)
Description: Predicted to have ATPase-coupled intramembrane lipid transporter activity. Predicted to be involved in phospholipid translocation. Predicted to localize to several cellular components, including endoplasmic reticulum; recycling endosome; and trans-Golgi network. Orthologous to human ATP11B (ATPase phospholipid transporting 11B (putative)); INTERACTS WITH acrylamide; bisphenol A; oxaliplatin.
Type: protein-coding
RefSeq Status: MODEL
Also known as: ATPase, class VI, type 11B; LOC361929; probable phospholipid-transporting ATPase IF; similar to Potential phospholipid-transporting ATPase IF (ATPase class I type 11B) (ATPase IR)
Orthologs:
Homo sapiens (human) : ATP11B (ATPase phospholipid transporting 11B (putative))  HGNC  Alliance
Mus musculus (house mouse) : Atp11b (ATPase, class VI, type 11B)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Atp11b (ATPase phospholipid transporting 11B (putative))
Pan paniscus (bonobo/pygmy chimpanzee) : ATP11B (ATPase phospholipid transporting 11B (putative))
Canis lupus familiaris (dog) : ATP11B (ATPase phospholipid transporting 11B (putative))
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Atp11b (ATPase phospholipid transporting 11B (putative))
Sus scrofa (pig) : ATP11B (ATPase phospholipid transporting 11B (putative))
Chlorocebus sabaeus (African green monkey) : ATP11B (ATPase phospholipid transporting 11B (putative))
Heterocephalus glaber (naked mole-rat) : Atp11b (ATPase phospholipid transporting 11B (putative))
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.02122,337,757 - 122,445,090 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl2122,368,265 - 122,444,878 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.02141,975,343 - 142,081,548 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.42122,139,635 - 122,306,306 (+)NCBIRGSC3.4rn4RGSC3.4
Celera2113,557,016 - 113,660,657 (+)NCBICelera
Cytogenetic Map2q25NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Atp11b
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1561719
Created: 2006-02-09
Species: Rattus norvegicus
Last Modified: 2020-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.