Popdc1 (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCr8 | 20 | 50,401,611 - 50,442,653 (+) | NCBI | | GRCr8 | | | mRatBN7.2 | 20 | 48,819,241 - 48,860,282 (+) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 20 | 48,822,308 - 48,857,472 (+) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | 20 | 50,565,097 - 50,600,096 (+) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 20 | 50,214,848 - 50,249,847 (+) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 20 | 50,899,187 - 50,934,183 (+) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 20 | 50,439,885 - 50,474,678 (+) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 20 | 50,439,883 - 50,474,678 (+) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 20 | 52,052,628 - 52,086,539 (+) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 20 | 49,671,174 - 49,671,683 (+) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | Celera | 20 | 51,164,981 - 51,200,377 (-) | NCBI | | Celera | | | Cytogenetic Map | 20 | q13 | NCBI | | | | |
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POPDC1 (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCh38 | 6 | 105,096,822 - 105,137,157 (-) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 6 | 105,096,822 - 105,137,157 (-) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 6 | 105,544,697 - 105,585,032 (-) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 6 | 105,651,390 - 105,691,236 (-) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Build 34 | 6 | 105,651,393 - 105,690,914 | NCBI | | | | | Celera | 6 | 106,167,189 - 106,206,693 (-) | NCBI | | Celera | | | Cytogenetic Map | 6 | q21 | NCBI | | | | | HuRef | 6 | 102,987,978 - 103,028,002 (-) | NCBI | | HuRef | | | CHM1_1 | 6 | 105,806,724 - 105,846,753 (-) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 6 | 106,272,906 - 106,312,920 (-) | NCBI | | T2T-CHM13v2.0 | | |
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Popdc1 (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCm39 | 10 | 45,211,783 - 45,248,580 (+) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 10 | 45,211,868 - 45,248,575 (+) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 10 | 45,335,735 - 45,372,484 (+) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 10 | 45,335,772 - 45,372,479 (+) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 10 | 45,055,568 - 45,089,514 (+) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 10 | 45,024,177 - 45,058,123 (+) | NCBI | | MGSCv36 | mm8 | | Celera | 10 | 46,209,822 - 46,242,144 (+) | NCBI | | Celera | | | Cytogenetic Map | 10 | B2 | NCBI | | | | | cM Map | 10 | 23.47 | NCBI | | | | |
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Popdc1 (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChiLan1.0 Ensembl | NW_004955411 | 30,517,875 - 30,551,335 (-) | Ensembl | ChiLan1.0 | | | | ChiLan1.0 | NW_004955411 | 30,517,917 - 30,548,424 (-) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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POPDC1 (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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NHGRI_mPanPan1-v2 | 5 | 125,111,875 - 125,156,846 (-) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 6 | 122,998,350 - 123,043,287 (-) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 6 | 102,915,148 - 102,951,141 (-) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 6 | 106,784,465 - 106,822,050 (-) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 6 | 106,787,615 - 106,822,050 (-) | Ensembl | panpan1.1 | | panPan2 | |
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BVES (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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CanFam3.1 | 12 | 62,542,274 - 62,581,110 (-) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 12 | 62,545,666 - 62,579,548 (-) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 12 | 62,331,453 - 62,369,673 (-) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 12 | 63,393,637 - 63,432,405 (-) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 12 | 63,393,639 - 63,432,655 (-) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 12 | 62,748,894 - 62,787,110 (-) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 12 | 62,590,058 - 62,628,349 (-) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 12 | 62,868,831 - 62,907,346 (-) | NCBI | | UU_Cfam_GSD_1.0 | | |
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Popdc1 (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
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HiC_Itri_2 | NW_024404946 | 97,512,420 - 97,548,660 (-) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936564 | 1,788,317 - 1,823,084 (-) | Ensembl | SpeTri2.0 | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936564 | 1,791,733 - 1,823,421 (-) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
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BVES (Sus scrofa - pig) |
Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
Sscrofa11.1 Ensembl | 1 | 71,314,274 - 71,360,175 (-) | Ensembl | Sscrofa11.1 | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 1 | 71,316,354 - 71,360,255 (-) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 1 | 80,636,881 - 80,681,079 (-) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
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POPDC1 (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChlSab1.1 | 13 | 68,668,248 - 68,704,661 (+) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 13 | 68,668,321 - 68,707,885 (+) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666040 | 41,016,271 - 41,055,600 (+) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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Popdc1 (Heterocephalus glaber - naked mole-rat) |
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