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Gene: Ccar1 (cell division cycle and apoptosis regulator 1) Rattus norvegicus

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Symbol:

Ccar1

Name:

cell division cycle and apoptosis regulator 1

RGD ID:

1560358

Description:

Predicted to enable RNA polymerase II cis-regulatory region sequence-specific DNA binding activity; nuclear receptor coactivator activity; and transcription corepressor activity. Predicted to be involved in positive regulation of cell migration; positive regulation of cell population proliferation; and regulation of DNA-templated transcription. Predicted to act upstream of or within positive regulation of apoptotic process. Predicted to be located in nuclear envelope lumen. Predicted to be active in nucleus. Orthologous to human CCAR1 (cell division cycle and apoptosis regulator 1); INTERACTS WITH 1,3-dinitrobenzene; 6-propyl-2-thiouracil; bisphenol A.

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

cell division cycle and apoptosis regulator protein 1; cell division cycle and apoptosis regulator protein 1-like; LOC100911233; LOC361849; RGD1560358; similar to cell division cycle and apoptosis regulator 1

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

mRatBN7.2 - mRatBN7.2 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	20	31,228,624 - 31,271,233 (-)	NCBI		GRCr8
mRatBN7.2	20	30,685,916 - 30,728,531 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	20	30,685,916 - 30,728,526 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	20	31,696,838 - 31,739,436 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	20	31,087,757 - 31,130,353 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	20	31,824,546 - 31,867,127 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	20	32,373,443 - 32,416,044 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	20	32,373,443 - 32,416,044 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	20	34,157,349 - 34,199,950 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	20	29,997,000 - 30,039,602 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
Celera	20	32,104,396 - 32,146,977 (-)	NCBI		Celera
Cytogenetic Map	20	q11	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

1,2-dimethylhydrazine (ISO)

1,3-dinitrobenzene (EXP)

2,2',4,4'-Tetrabromodiphenyl ether (ISO)

2,3,7,8-tetrachlorodibenzodioxine (ISO)

6-propyl-2-thiouracil (EXP)

aflatoxin B1 (ISO)

Aroclor 1254 (ISO)

benzatropine (ISO)

benzo[a]pyrene (ISO)

beta-lapachone (ISO)

bisphenol A (EXP,ISO)

bortezomib (ISO)

Brodifacoum (EXP)

cadmium atom (ISO)

cadmium dichloride (EXP,ISO)

caffeine (ISO)

cannabidiol (ISO)

carbon nanotube (ISO)

chloroprene (EXP)

chlorpyrifos (ISO)

cisplatin (ISO)

clozapine (ISO)

copper atom (ISO)

copper(0) (ISO)

curcumin (ISO)

cypermethrin (ISO)

dexamethasone (ISO)

dibutyl phthalate (EXP,ISO)

dicrotophos (ISO)

disulfiram (ISO)

dorsomorphin (ISO)

doxorubicin (ISO)

emetine (ISO)

enzyme inhibitor (ISO)

ethanol (ISO)

FR900359 (ISO)

gentamycin (EXP)

hydroquinone O-beta-D-glucopyranoside (ISO)

ivermectin (ISO)

kojic acid (ISO)

methapyrilene (EXP)

methimazole (EXP)

methylmercury chloride (ISO)

miconazole (ISO)

N-nitrosodiethylamine (EXP)

nocodazole (ISO)

paclitaxel (ISO)

paracetamol (EXP,ISO)

perfluorooctanoic acid (ISO)

phenobarbital (ISO)

pregnenolone 16alpha-carbonitrile (EXP)

pyrazinecarboxamide (EXP)

rimonabant (ISO)

rotenone (ISO)

SB 431542 (ISO)

sodium arsenite (ISO)

sulindac sulfide (ISO)

sunitinib (ISO)

thiram (ISO)

titanium dioxide (ISO)

trichloroethene (EXP)

trimellitic anhydride (ISO)

triphenyl phosphate (ISO)

troglitazone (ISO)

tungsten (ISO)

tunicamycin (ISO)

valproic acid (ISO)

vinclozolin (EXP)

vincristine (ISO)

vorinostat (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

negative regulation of DNA-templated transcription (IEA)

positive regulation of apoptotic process (ISO)

positive regulation of cell migration (ISO)

positive regulation of cell population proliferation (ISO)

positive regulation of DNA-templated transcription (IEA)

regulation of DNA-templated transcription (IBA)

Cellular Component

cytoplasm (IEA)

nuclear envelope lumen (ISO)

nucleus (IBA)

Molecular Function

protein binding (ISO)

RNA polymerase II cis-regulatory region sequence-specific DNA binding (ISO)

transcription coactivator activity (ISO)

transcription corepressor activity (ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2.	GOA pipeline	RGD automated data pipeline
3.	ClinVar Automated Import and Annotation Pipeline	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
4.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

Additional References at PubMed

PMID:12816952	PMID:18722177	PMID:22082260	PMID:22658674	PMID:22681889	PMID:23887938	PMID:24245781	PMID:31505169

Genomics

Comparative Map Data

Ccar1
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	20	31,228,624 - 31,271,233 (-)	NCBI		GRCr8
mRatBN7.2	20	30,685,916 - 30,728,531 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	20	30,685,916 - 30,728,526 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	20	31,696,838 - 31,739,436 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	20	31,087,757 - 31,130,353 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	20	31,824,546 - 31,867,127 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	20	32,373,443 - 32,416,044 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	20	32,373,443 - 32,416,044 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	20	34,157,349 - 34,199,950 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	20	29,997,000 - 30,039,602 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
Celera	20	32,104,396 - 32,146,977 (-)	NCBI		Celera
Cytogenetic Map	20	q11	NCBI

CCAR1
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	10	68,721,239 - 68,792,377 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	10	68,721,012 - 68,792,377 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	10	70,480,996 - 70,552,134 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	10	70,150,977 - 70,221,315 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	10	70,150,976 - 70,221,315	NCBI
Celera	10	63,756,894 - 63,827,219 (+)	NCBI		Celera
Cytogenetic Map	10	q21.3	NCBI
HuRef	10	64,482,373 - 64,552,734 (+)	NCBI		HuRef
CHM1_1	10	70,764,405 - 70,834,746 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	10	69,590,457 - 69,661,544 (+)	NCBI		T2T-CHM13v2.0

Ccar1
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	10	62,579,707 - 62,628,147 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	10	62,579,707 - 62,628,065 (-)	Ensembl		GRCm39 Ensembl
GRCm38	10	62,743,928 - 62,792,368 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	10	62,743,928 - 62,792,286 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	10	62,206,676 - 62,255,116 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	10	62,139,819 - 62,187,613 (-)	NCBI		MGSCv36	mm8
Celera	10	63,845,207 - 63,893,505 (-)	NCBI		Celera
Cytogenetic Map	10	B4	NCBI
cM Map	10	32.47	NCBI

Ccar1
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955425	20,878,178 - 20,923,007 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955425	20,878,178 - 20,923,007 (+)	NCBI	ChiLan1.0	ChiLan1.0

CCAR1
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	8	80,872,893 - 80,946,096 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	10	80,878,321 - 80,951,422 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	10	65,193,942 - 65,267,857 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	10	67,731,224 - 67,801,821 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	10	67,732,584 - 67,801,530 (+)	Ensembl	panpan1.1		panPan2

CCAR1
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	4	19,916,298 - 19,977,632 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	4	19,918,229 - 19,977,121 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	4	20,047,474 - 20,108,824 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	4	20,188,654 - 20,250,501 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	4	20,189,363 - 20,249,993 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	4	20,089,858 - 20,151,176 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	4	20,293,084 - 20,354,422 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	4	20,635,339 - 20,697,252 (+)	NCBI		UU_Cfam_GSD_1.0

LOC101960775
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024407213	61,080,063 - 61,272,570 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936521	9,647,334 - 9,765,466 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0 Ensembl	NW_004936521	9,569,760 - 9,625,236 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936521	9,573,918 - 9,624,469 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

CCAR1
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	14	71,827,530 - 71,894,754 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	14	71,827,509 - 71,894,643 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	14	77,889,133 - 77,909,247 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

CCAR1
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	9	62,616,825 - 62,689,540 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	9	62,616,792 - 62,688,247 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666048	23,366,000 - 23,440,682 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Ccar1
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624754	2,981,661 - 3,033,411 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624754	2,981,845 - 3,035,304 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in Ccar1
337 total Variants

miRNA Target Status

Predicted Target Of

	Summary Value
Count of predictions:	59
Count of miRNA genes:	54
Interacting mature miRNAs:	56
Transcripts:	ENSRNOT00000067004
Prediction methods:	Miranda, Rnahybrid
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (mRatBN7.2)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
4889610	Pancm3	Pancreatic morphology QTL 3	3.75	0.001	pancreas mass (VT:0010144)	pancreas wet weight (CMO:0000626)	20	17617832	47606836	Rat
2303587	Bw93	Body weight QTL 93	13		body mass (VT:0001259)	body weight (CMO:0000012)	20	25106722	54435887	Rat
1641915	Colcr9	Colorectal carcinoma resistance QTL 9	2.97	0.0024	intestine integrity trait (VT:0010554)	benign colorectal tumor number (CMO:0001795)	20	1530655	46530655	Rat
7411668	Foco32	Food consumption QTL 32	8	0.001	eating behavior trait (VT:0001431)	feed conversion ratio (CMO:0001312)	20	1	36600972	Rat
2305926	Iddm37	Insulin dependent diabetes mellitus QTL 37	6		blood glucose amount (VT:0000188)	plasma glucose level (CMO:0000042)	20	1527842	46527842	Rat
2303626	Vencon10	Ventilatory control QTL 10		0.001	respiration trait (VT:0001943)	respiration rate (CMO:0000289)	20	19190721	54435887	Rat
1598869	Memor6	Memory QTL 6	3.1		exploratory behavior trait (VT:0010471)	total horizontal distance resulting from voluntary locomotion in an experimental apparatus (CMO:0001443)	20	29244388	54435887	Rat
7411652	Foco24	Food consumption QTL 24		0.001	eating behavior trait (VT:0001431)	feed conversion ratio (CMO:0001312)	20	11757515	54435887	Rat
1331747	Hrtrt16	Heart rate QTL 16	3.163		heart pumping trait (VT:2000009)	heart rate (CMO:0000002)	20	25209734	54435887	Rat
1598816	Memor12	Memory QTL 12	2.4		exploratory behavior trait (VT:0010471)	average horizontal distance between subject and target during voluntary locomotion in an experimental apparatus (CMO:0002674)	20	2606836	47606836	Rat
2303578	Gluco50	Glucose level QTL 50	2		blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	20	25106722	54435887	Rat
2317880	Alcrsp25	Alcohol response QTL 25	2.3		response to alcohol trait (VT:0010489)	duration of loss of righting reflex (CMO:0002289)	20	17697550	54435887	Rat
6893685	Bw111	Body weight QTL 111	2.7	0.004	body mass (VT:0001259)	body weight (CMO:0000012)	20	1	32578807	Rat
9590252	Scort12	Serum corticosterone level QTL 12	20.46	0.001	blood corticosterone amount (VT:0005345)	plasma corticosterone level (CMO:0001173)	20	1	36600972	Rat
9590092	Insglur9	Insulin/glucose ratio QTL 9	18.38	0.001	blood insulin amount (VT:0001560)	calculated plasma insulin level (CMO:0002170)	20	11757515	54435887	Rat
2300188	Bmd68	Bone mineral density QTL 68	6.4	0.0001	femur mineral mass (VT:0010011)	volumetric bone mineral density (CMO:0001553)	20	25106722	54435887	Rat

Markers in Region

RH131471

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	20	30,685,949 - 30,686,143 (+)	MAPPER	mRatBN7.2
Rnor_6.0	20	32,373,477 - 32,373,670	NCBI	Rnor6.0
Rnor_5.0	20	34,157,383 - 34,157,576	UniSTS	Rnor5.0
RGSC_v3.4	20	29,997,034 - 29,997,227	UniSTS	RGSC3.4
Celera	20	32,104,430 - 32,104,623	UniSTS
Cytogenetic Map	20	q11	UniSTS

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	nervous system	renal system	reproductive system	respiratory system
9	11	49	113	91	90	59	25	59	6	218	97	93	45	60	31

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001108535	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001434643	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001434644	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006256462	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006256463	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006256464	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008772894	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008772897	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039098883	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063279303	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063279304	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063279305	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063279306	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063279307	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063279308	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063279309	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063279310	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063279311	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	CH474016	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ227619	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ228218	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ233652	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000020	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000067004 ⟹ ENSRNOP00000059432

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	20	30,685,916 - 30,728,526 (-)	Ensembl
Rnor_6.0 Ensembl	20	32,373,443 - 32,416,044 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000097504 ⟹ ENSRNOP00000085003

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	20	30,685,916 - 30,728,526 (-)	Ensembl

RefSeq Acc Id:

NM_001108535 ⟹ NP_001102005

RefSeq Status:

PROVISIONAL

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	20	31,228,624 - 31,271,227 (-)	NCBI
mRatBN7.2	20	30,685,916 - 30,728,526 (-)	NCBI
Rnor_6.0	20	32,373,443 - 32,416,044 (-)	NCBI
Rnor_5.0	20	34,157,349 - 34,199,950 (-)	NCBI
RGSC_v3.4	20	29,997,000 - 30,039,602 (-)	RGD
Celera	20	32,104,396 - 32,146,977 (-)	RGD

Sequence:

show sequence

AACGTCCAGCCGCACGCGCCCGTTCCTCCTCGAGACCGGAGGAGGTGCGGCGTGGAGGAGGGGA
GCAGTGTGCGCATGCGCCTGAGCTTGACGGGTTTTGAAATGGCTTCTCTGTTAACCCCGGCCCG
ACTCAGGTGAAGATATCTGCTGTAGAAGAGAAGCAAGTGAAGGTTTCCCCCCCTTGCATCATGG
CTCAGTTTGGAGGACAGAAGAATCCTCCATGGGCTACTCAGTTTACAGCCACGGCGGTGTCACA
ACCAGCTGCACTAGGTGTTCAGCAGCCATCACTTCTGGGAGCATCCCCTACCATCTATACGCAG
CAGACTGCATTGGCGGCCGCAGGCCTTACCACGCAGACGCCAGCAAACTATCAGTTAACACAAA
CTGCGGCACTGCAGCAGCAAGCTGCAGCTGTCTTACAGCAGCAATATTCACAACCTCAGCAGGC
CTTGTATAGTGTGCAACAGCAGTTACAGCAACCCCAGCAGACCATTTTAACACAGCCAGCTGTT
GCATTGCCCACAAGCCTTAGCCTGTCTACTCCTCAGCCTGCAGCACAGATTACTGTGTCCTATC
CAACACCAAGGTCCAGTCAACAGCAGACTCAACCTCAGAAGCAGCGTGTTTTCACAGGAGTGGT
TACAAAACTACATGATACGTTTGGATTTGTGGATGAAGATGTATTCTTTCAGCTTGGTGCTGTT
AAAGGGAAAACCCCCCAAGTGGGTGATAGAGTCTTGGTTGAAGCAACCTATAATCCTAATATGC
CTTTTAAATGGAATGCACAAAGAATTCAAACACTACCAAATCAGAATCAGTCACAAACCCAACC
TTTACTGAAGACTCCTACTGCTGTTATCCAGCCGATTGTGCCACAGACAACATTTGGTGTTCAG
GCACAGCCCCAACCCCAGTCATTATTGCAAGCCCAGATCTCAGCTGCTTCTATTACACCCCTAT
TGCAGACGCAGCCACAGCCCTTACTACAGCAGCCACAGCAAAAAGCTGGCTTATTGCAGCCTCC
TGTCCGAATAGTATCACAGCCACAACCCGCACGGAGATTAGATCCGCCATCTAGATTTTCAGGA
AGAAATGACAGAGGGGATCAAGTACCTAATAGAAAAGATGACCGAAGTCGTGAAAGGGACAGAG
AAAGACGCAGATCCAGAGAAAGATCACCTCAGAGGAAACGTTCCCGGGAGAGGTCGCCCCGGAG
AGAAAGAGAGCGATCCCCTCGGAGAGTCCGCCGTGTCGTTCCACGGTACACAGTGCAGTTTTCA
AAGTTTTCTTTAGATTGTCCCAGTTGTGACATGATGGAATTAAGGCGCCGTTATCAGAACTTAT
ATATTCCTAGTGACTTTTTTGATGCTCAGTTTACATGGGTGGATGCTTTCCCTTTGTCAAGACC
ATTTCAACTGGGAAATTACTGCAATTTTTATGTGATGCACCGAGAAGTGGAGTCCTTAGAAAAA
AATGTGGCTGTTCTTGACCCACCTGATGCTGACCACCTGTACAGTGCAAAGGTAATGCTGATGG
CTAGCCCTAGTATGGAAGATTTGTATCATAAGTCATGTGCTCTTGCTGAAGACCCACAAGACCT
TCGTGATGGTTTTCAGCATCCTGCTAGACTTGTTAAGTTTCTAGTGGGAATGAAAGGCAAGGAT
GAAGCCATGGCCATTGGAGGCCACTGGTCTCCTTCGCTGGATGGACCAAACCCAGAAAAAGACC
CCTCTGTGTTGATTAAGACTGCCATTCGTTGTTGTAAGGCCCTGACAGGCATTGATCTAAGTGT
GTGCACACAATGGTACCGTTTTGCAGAGATTCGCTACCATCGCCCTGAGGAGACCCACAAGGGG
CGTACAGTTCCAGCTCATGTGGAGACAGTGGTTTTATTTTTCCCGGATGTTTGGCATTGCCTTC
CCACCCGCTCAGAGTGGGAAACCCTCTCCCGAGGATACAAGCAGCAGCTGGTCGAGAAGCTTCA
GGGTGAACGCAAGAAGGCTGATGGAGAACAGGATGAAGAAGAGAAGGATGATGGTGAAGTTAAA
GAAATTGCTACTCCTACCCATTGGTCTAAACTTGATCCAAAGGCAATGAAGGTAAACGATCTCC
GAAAAGAATTAGAAAGTCGAGCTCTTAGTTCCAAAGGACTAAAATCGCAGTTAATAGCTCGCCT
GACAAAGCAGCTTAAAATAGAAGAACAGAAAGAAGAGCAGAAGGAATTAGAGAAGTCTGAAAAG
GAAGAGGAAGATGAGGATGATAAGAAGTCTGAGGATGATAAAGAGGAAGAAGAAAGAAAACGTC
AAGAAGAAGTGGAACGCCAACGCCAAGAAAGAAGATACATTTTGCCTGATGAGCCTGCCATAAT
TGTCCATCCAAACTGGGCTGCAAAAAGTGGGAAGTTTGATTGCAGCATCATGTCTTTGAGTGTC
CTTTTAGACTACAGATTGGAAGATAATAAAGAACATTCGTTTGAGGTTTCATTGTTTGCAGAAC
TTTTCAATGAAATGCTTCAAAGAGATTTTGGGGTCAGAATATACAAATCATTACTCTCTCTTCC
TGAGAAAGAGGACAAAAAAGATAAGGAAAAGAAAAGCAAAAAAGAAGAGAGAAAAGATAAAAAA
GAAGAGAGAGAAGATGATATTGATGAACCAAAACCAAAACGGAGAAAATCGGGCGATGATAAAG
ACAAAAAAGAAGACAGAGATGAGAGGAAGAAAGAAGAGAAAAGAAAAGATGATTCTAAGGATGA
TGATGAAACTGAAGAAGATAACAATCAGGATGAGTATGACCCCATGGAGGCAGAGGAGGCGGAG
GAGGAGGAGGACGACAGGGAGGAGGAGGAAGTGAACAAACGAGACGACAAAAGGGACGTCAGCC
GATACTGCAAGGACAGACCCTCAAAGGACAAGGAAAAAGAGAAGCCTCAAATGGTCACAGTTAA
CAGGGATCTGCTAATGGCCTTTGTTTATTTTGATCAAAGTCATTGTGGTTACCTTCTTGAAAAG
GATTTGGAAGAAATACTTTATACTCTTGGACTGCATCTTTCTCGGGCTCAGGTAAAGAAACTGC
TCAATAAAGTAGTGCTCCGAGAATCGTGCTTCTATCGGAAATTAACAGACACCTCAAAAGACGG
CGAGAGCCATGACGAGCCAGAGTCGCTGCAGGGGGACACGACGCTGGGAAACAGGTTACTACTT
CCCACACCAACAGTGAAGCAGGAATCGAAGGATGGAGAAGAAAACGTAGGGCTTATTGTGTACA
ACGGTGCAATGGTGGATGTTGGGAGTCTCTTACAAAAGCTGGAAAAGAGTGAAAAAGTAAGAGC
TGAGGTAGAACAGAAGCTCCAGTTACTAGAGGAGAAAACAGATGAAGACGGAAAAACTATATTA
AACTTGGAGAATTCTAACAAAAGCCTCTCTGGTGAACTTAGAGAGGTCAAAAAAGACCTTGGTC
AATTACAAGAAAACTTGAAGGTTTCAGAAAACATGAATTTGCAATTTGAAAACCAATTGAATAA
AACACTCAGAAACTTATCCACAGTCATGGATGATATCCACACTGTCCTAAAAAAGGATAACGTA
AAGAATGAAGACAGAGATCAGAAATCCAAGGAGAATGGTTCAAGTGTATGATAAAATACATTTG
GTGATGAGGAGTGGTGTTAAATAATGTACTATATAAAAATCATGACACAGGAATGTTTGAGGGC
AATGCATGTTTGATTTTAGTAGTATAAACATATGTTAGTTCAAATGATGTATAAAGTTTTATGA
ATGTGAGTTTGCTTTTGAAAATTGCCTGTAATTTCTAGCATTCAAATTAAATACTCACTGAGTG
AAGAATTTTGCATTGCAAAATCTTTTAGGATGAACTTTGTTATAGTTTTAACCCCAATAAAGTT
CATCAGTTTAATTGACAATAACTTGTAATTACTAAATGTCTTTTATTGAAATATCTAGACATTT
TGCTTTTATTTATAGAACTATTGTTTTATAGTTTTATAGTTCACTTTTTTTAGTGTCAGTATGT
ATCATAAAATAGCATGCTCCTTAATATTTGCAACCTTTTTGGACTAGTATTTTCAGTGTTTAAA
TGTAGTTGTTAAGCCGTCTGCTCATGGTGGCACATCCCATTAACCCCAGTGAGACACTGTCTCA
GGAACAATGCAATTAATCCAAAAGACGCTGTGTAAAAGCCTACAACTGAGAAAGCGATCGAGCT
AGCATTGTGCTTAGAGTTTACACAAAGTAACCGTCTTGACAGTAGTTACTGTACTCAGTTAATT
GTTTTACTTGCCCTGGATACTTCTATTTTAATTTTCAGAAGTTAAAAAGGAGGCAGTGGACATC
AAATGCACAGCTTAGTGACAAGCCAGTACATCGTCAGTTTGATTGATGCCTTAAGTTAAGTCAT
TAAAAAATATTTTTTTAATTAA

hide sequence

RefSeq Acc Id:

XM_006256462 ⟹ XP_006256524

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	20	31,229,140 - 31,271,227 (-)	NCBI
mRatBN7.2	20	30,685,916 - 30,728,523 (-)	NCBI
Rnor_6.0	20	32,373,447 - 32,415,997 (-)	NCBI
Rnor_5.0	20	34,157,349 - 34,199,950 (-)	NCBI

Sequence:

show sequence

CGGCGTGGAGGAGGGGAGCAGTGTGCGCATGCGCCTGAGCTTGACGGGTTTTGAAATGGCTTCT
CTGTTAACCCCGGCCCGACTCAGGTGAAGATATCTGCTGTAGAAGAGAAGCAAGTGAAGGTTTC
CCCCCCTTGCATCATGGCTCAGTTTGGAGGACAGAAGAATCCTCCATGGGCTACTCAGTTTACA
GCCACGGCGGTGTCACAACCAGCTGCACTAGGTGTTCAGCAGCCATCACTTCTGGGAGCATCCC
CTACCATCTATACGCAGCAGACTGCATTGGCGGCCGCAGGCCTTACCACGCAGACGCCAGCAAA
CTATCAGTTAACACAAACTGCGGCACTGCAGCAGCAAGCTGCAGCTGTCTTACAGCAGCAATAT
TCACAACCTCAGCAGGCCTTGTATAGTGTGCAACAGCAGTTACAGCAACCCCAGCAGACCATTT
TAACACAGCCAGCTGTTGCATTGCCCACAAGCCTTAGCCTGTCTACTCCTCAGCCTGCAGCACA
GATTACTGTGTCCTATCCAACACCAAGGTCCAGTCAACAGCAGACTCAACCTCAGAAGCAGCGT
GTTTTCACAGGAGTGGTTACAAAACTACATGATACGTTTGGATTTGTGGATGAAGATGTATTCT
TTCAGCTTGGTGCTGTTAAAGGGAAAACCCCCCAAGTGGGTGATAGAGTCTTGGTTGAAGCAAC
CTATAATCCTAATATGCCTTTTAAATGGAATGCACAAAGAATTCAAACACTACCAAATCAGAAT
CAGTCACAAACCCAACCTTTACTGAAGACTCCTACTGCTGTTATCCAGCCGATTGTGCCACAGA
CAACATTTGGTGTTCAGGCACAGCCCCAACCCCAGTCATTATTGCAAGCCCAGATCTCAGCTGC
TTCTATTACACCCCTATTGCAGACGCAGCCACAGCCCTTACTACAGCAGCCACAGCAAAAAGCT
GGCTTATTGCAGCCTCCTGTCCGAATAGTATCACAGCCACAACCCGCACGGAGATTAGATCCGC
CATCTAGATTTTCAGGAAGAAATGACAGAGGGGATCAAGTACCTAATAGAAAAGATGACCGAAG
TCGTGAAAGGGACAGAGAAAGACGCAGATCCAGAGAAAGATCACCTCAGAGGAAACGTTCCCGG
GAGAGGTCGCCCCGGAGAGAAAGAGAGCGATCCCCTCGGAGAGTCCGCCGTGTCGTTCCACGGT
ACACAGTGCAGTTTTCAAAGTTTTCTTTAGATTGTCCCAGTTGTGACATGATGGAATTAAGGCG
CCGTTATCAGAACTTATATATTCCTAGTGACTTTTTTGATGCTCAGTTTACATGGGTGGATGCT
TTCCCTTTGTCAAGACCATTTCAACTGGGAAATTACTGCAATTTTTATGTGATGCACCGAGAAG
TGGAGTCCTTAGAAAAAAATGTGGCTGTTCTTGACCCACCTGATGCTGACCACCTGTACAGTGC
AAAGGTAATGCTGATGGCTAGCCCTAGTATGGAAGATTTGTATCATAAGTCATGTGCTCTTGCT
GAAGACCCACAAGACCTTCGTGATGGTTTTCAGCATCCTGCTAGACTTGTTAAGTTTCTAGTGG
GAATGAAAGGCAAGGATGAAGCCATGGCCATTGGAGGCCACTGGTCTCCTTCGCTGGATGGACC
AAACCCAGAAAAAGACCCCTCTGTGTTGATTAAGACTGCCATTCGTTGTTGTAAGGCCCTGACA
GGCATTGATCTAAGTGTGTGCACACAATGGTACCGTTTTGCAGAGATTCGCTACCATCGCCCTG
AGGAGACCCACAAGGGGCGTACAGTTCCAGCTCATGTGGAGACAGTGGTTTTATTTTTCCCGGA
TGTTTGGCATTGCCTTCCCACCCGCTCAGAGTGGGAAACCCTCTCCCGAGGATACAAGCAGCAG
CTGGTCGAGAAGCTTCAGGGTGAACGCAAGAAGGCTGATGGAGAACAGGATGAAGAAGAGAAGG
ATGATGGTGAAGTTAAAGAAATTGCTACTCCTACCCATTGGTCTAAACTTGATCCAAAGGCAAT
GAAGGTAAACGATCTCCGAAAAGAATTAGAAAGTCGAGCTCTTAGTTCCAAAGGACTAAAATCG
CAGTTAATAGCTCGCCTGACAAAGCAGCTTAAAATAGAAGAACAGAAAGAAGAGCAGAAGGAAT
TAGAGAAGTCTGAAAAGGAAGAGGAAGATGAGGATGATAAGAAGTCTGAGGATGATAAAGAGGA
AGAAGAAAGAAAACGTCAAGAAGAAGTGGAACGCCAACGCCAAGAAAGAAGATACATTTTGCCT
GATGAGCCTGCCATAATTGTCCATCCAAACTGGGCTGCAAAAAGTGGGAAGTTTGATTGCAGCA
TCATGTCTTTGAGTGTCCTTTTAGACTACAGATTGGAAGATAATAAAGAACATTCGTTTGAGGT
TTCATTGTTTGCAGAACTTTTCAATGAAATGCTTCAAAGAGATTTTGGGGTCAGAATATACAAA
TCATTACTCTCTCTTCCTGAGAAAGAGGACAAAAAAGATAAGGAAAAGAAAAGCAAAAAAGAAG
AGAGAAAAGATAAAAAAGAAGAGAGAGAAGATGATATTGATGAACCAAAACCAAAACGGAGAAA
ATCGGGCGATGATAAAGACAAAAAAGAAGACAGAGATGAGAGGAAGAAAGAAGAGAAAAGAAAA
GATGATTCTAAGGATGATGATGAAACTGAAGAAGATAACAATCAGGATGAGTATGACCCCATGG
AGGCAGAGGAGGCGGAGGAGGAGGAGGACGCGGACCTGTCTCCCCTTTGCTTTACAGACAGGGA
GGAGGAGGAAGTGAACAAACGAGACGACAAAAGGGACGTCAGCCGATACTGCAAGGACAGACCC
TCAAAGGACAAGGAAAAAGAGAAGCCTCAAATGGTCACAGTTAACAGGGATCTGCTAATGGCCT
TTGTTTATTTTGATCAAAGTCATTGTGGTTACCTTCTTGAAAAGGATTTGGAAGAAATACTTTA
TACTCTTGGACTGCATCTTTCTCGGGCTCAGGTAAAGAAACTGCTCAATAAAGTAGTGCTCCGA
GAATCGTGCTTCTATCGGAAATTAACAGACACCTCAAAAGACGGCGAGAGCCATGACGAGCCAG
AGTCGCTGCAGGGGGACACGACGCTGGGAAACAGGTTACTACTTCCCACACCAACAGTGAAGCA
GGAATCGAAGGATGGAGAAGAAAACGTAGGGCTTATTGTGTACAACGGTGCAATGGTGGATGTT
GGGAGTCTCTTACAAAAGCTGGAAAAGAGTGAAAAAGTAAGAGCTGAGGTAGAACAGAAGCTCC
AGTTACTAGAGGAGAAAACAGATGAAGACGGAAAAACTATATTAAACTTGGAGAATTCTAACAA
AAGCCTCTCTGGTGAACTTAGAGAGGTCAAAAAAGACCTTGGTCAATTACAAGAAAACTTGAAG
GTTTCAGAAAACATGAATTTGCAATTTGAAAACCAATTGAATAAAACACTCAGAAACTTATCCA
CAGTCATGGATGATATCCACACTGTCCTAAAAAAGGATAACGTAAAGAATGAAGACAGAGATCA
GAAATCCAAGGAGAATGGTTCAAGTGTATGATAAAATACATTTGGTGATGAGGAGTGGTGTTAA
ATAATGTACTATATAAAAATCATGACACAGGAATGTTTGAGGGCAATGCATGTTTGATTTTAGT
AGTATAAACATATGTTAGTTCAAATGATGTATAAAGTTTTATGAATGTGAGTTTGCTTTTGAAA
ATTGCCTGTAATTTCTAGCATTCAAATTAAATACTCACTGAGTGAAGAATTTTGCATTGCAAAA
TCTTTTAGGATGAACTTTGTTATAGTTTTAACCCCAATAAAGTTCATCAGTTTAATTGACAATA
ACTTGTAATTACTAAATGTCTTTTATTGAAATATCTAGACATTTTGCTTTTATTTATAGAACTA
TTGTTTTATAGTTTTATAGTTCACTTTTTTTAGTGTCAGTATGTATCATAAAATAGCATGCTCC
TTAATATTTGCAACCTTTTTGGACTAGTATTTTCAGTGTTTAAATGTAGTTGTTAAGCCGTCTG
CTCATGGTGGCACATCCCATTAACCCCAGTGAGACACTGTCTCAGGAACAATGCAATTAATCCA
AAAGACGCTGTGTAAAAGCCTACAACTGAGAAAGCGATCGAGCTAGCATTGTGCTTAGAGTTTA
CACAAAGTAACCGTCTTGACAGTAGTTACTGTACTCAGTTAATTGTTTTACTTGCCCTGGATAC
TTCTATTTTAATTTTCAGAAGTTAAAAAGGAGGCAGTGGACATCAAATGCACAGCTTAGTGACA
AGCCAGTACATCGTCAGTTTGATTGATGCCTTAAGTTAAGTCATTAAAAAATATTTTTTTAA

hide sequence

RefSeq Acc Id:

XM_006256463 ⟹ XP_006256525

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	20	31,229,140 - 31,271,233 (-)	NCBI
mRatBN7.2	20	30,685,916 - 30,728,531 (-)	NCBI
Rnor_6.0	20	32,373,447 - 32,415,999 (-)	NCBI
Rnor_5.0	20	34,157,349 - 34,199,950 (-)	NCBI

Sequence:

show sequence

TGCGGCGTGGAGGAGGGGAGCAGTGTGCGCATGCGCCTGAGCTTGACGGGTTTTGAAATGGCTT
CTCTGTTAACCCCGGCCCGACTCAGATATCTGCTGTAGAAGAGAAGCAAGTGAAGGTTTCCCCC
CCTTGCATCATGGCTCAGTTTGGAGGACAGAAGAATCCTCCATGGGCTACTCAGTTTACAGCCA
CGGCGGTGTCACAACCAGCTGCACTAGGTGTTCAGCAGCCATCACTTCTGGGAGCATCCCCTAC
CATCTATACGCAGCAGACTGCATTGGCGGCCGCAGGCCTTACCACGCAGACGCCAGCAAACTAT
CAGTTAACACAAACTGCGGCACTGCAGCAGCAAGCTGCAGCTGTCTTACAGCAGCAATATTCAC
AACCTCAGCAGGCCTTGTATAGTGTGCAACAGCAGTTACAGCAACCCCAGCAGACCATTTTAAC
ACAGCCAGCTGTTGCATTGCCCACAAGCCTTAGCCTGTCTACTCCTCAGCCTGCAGCACAGATT
ACTGTGTCCTATCCAACACCAAGGTCCAGTCAACAGCAGACTCAACCTCAGAAGCAGCGTGTTT
TCACAGGAGTGGTTACAAAACTACATGATACGTTTGGATTTGTGGATGAAGATGTATTCTTTCA
GCTTGGTGCTGTTAAAGGGAAAACCCCCCAAGTGGGTGATAGAGTCTTGGTTGAAGCAACCTAT
AATCCTAATATGCCTTTTAAATGGAATGCACAAAGAATTCAAACACTACCAAATCAGAATCAGT
CACAAACCCAACCTTTACTGAAGACTCCTACTGCTGTTATCCAGCCGATTGTGCCACAGACAAC
ATTTGGTGTTCAGGCACAGCCCCAACCCCAGTCATTATTGCAAGCCCAGATCTCAGCTGCTTCT
ATTACACCCCTATTGCAGACGCAGCCACAGCCCTTACTACAGCAGCCACAGCAAAAAGCTGGCT
TATTGCAGCCTCCTGTCCGAATAGTATCACAGCCACAACCCGCACGGAGATTAGATCCGCCATC
TAGATTTTCAGGAAGAAATGACAGAGGGGATCAAGTACCTAATAGAAAAGATGACCGAAGTCGT
GAAAGGGACAGAGAAAGACGCAGATCCAGAGAAAGATCACCTCAGAGGAAACGTTCCCGGGAGA
GGTCGCCCCGGAGAGAAAGAGAGCGATCCCCTCGGAGAGTCCGCCGTGTCGTTCCACGGTACAC
AGTGCAGTTTTCAAAGTTTTCTTTAGATTGTCCCAGTTGTGACATGATGGAATTAAGGCGCCGT
TATCAGAACTTATATATTCCTAGTGACTTTTTTGATGCTCAGTTTACATGGGTGGATGCTTTCC
CTTTGTCAAGACCATTTCAACTGGGAAATTACTGCAATTTTTATGTGATGCACCGAGAAGTGGA
GTCCTTAGAAAAAAATGTGGCTGTTCTTGACCCACCTGATGCTGACCACCTGTACAGTGCAAAG
GTAATGCTGATGGCTAGCCCTAGTATGGAAGATTTGTATCATAAGTCATGTGCTCTTGCTGAAG
ACCCACAAGACCTTCGTGATGGTTTTCAGCATCCTGCTAGACTTGTTAAGTTTCTAGTGGGAAT
GAAAGGCAAGGATGAAGCCATGGCCATTGGAGGCCACTGGTCTCCTTCGCTGGATGGACCAAAC
CCAGAAAAAGACCCCTCTGTGTTGATTAAGACTGCCATTCGTTGTTGTAAGGCCCTGACAGGCA
TTGATCTAAGTGTGTGCACACAATGGTACCGTTTTGCAGAGATTCGCTACCATCGCCCTGAGGA
GACCCACAAGGGGCGTACAGTTCCAGCTCATGTGGAGACAGTGGTTTTATTTTTCCCGGATGTT
TGGCATTGCCTTCCCACCCGCTCAGAGTGGGAAACCCTCTCCCGAGGATACAAGCAGCAGCTGG
TCGAGAAGCTTCAGGGTGAACGCAAGAAGGCTGATGGAGAACAGGATGAAGAAGAGAAGGATGA
TGGTGAAGTTAAAGAAATTGCTACTCCTACCCATTGGTCTAAACTTGATCCAAAGGCAATGAAG
GTAAACGATCTCCGAAAAGAATTAGAAAGTCGAGCTCTTAGTTCCAAAGGACTAAAATCGCAGT
TAATAGCTCGCCTGACAAAGCAGCTTAAAATAGAAGAACAGAAAGAAGAGCAGAAGGAATTAGA
GAAGTCTGAAAAGGAAGAGGAAGATGAGGATGATAAGAAGTCTGAGGATGATAAAGAGGAAGAA
GAAAGAAAACGTCAAGAAGAAGTGGAACGCCAACGCCAAGAAAGAAGATACATTTTGCCTGATG
AGCCTGCCATAATTGTCCATCCAAACTGGGCTGCAAAAAGTGGGAAGTTTGATTGCAGCATCAT
GTCTTTGAGTGTCCTTTTAGACTACAGATTGGAAGATAATAAAGAACATTCGTTTGAGGTTTCA
TTGTTTGCAGAACTTTTCAATGAAATGCTTCAAAGAGATTTTGGGGTCAGAATATACAAATCAT
TACTCTCTCTTCCTGAGAAAGAGGACAAAAAAGATAAGGAAAAGAAAAGCAAAAAAGAAGAGAG
AAAAGATAAAAAAGAAGAGAGAGAAGATGATATTGATGAACCAAAACCAAAACGGAGAAAATCG
GGCGATGATAAAGACAAAAAAGAAGACAGAGATGAGAGGAAGAAAGAAGAGAAAAGAAAAGATG
ATTCTAAGGATGATGATGAAACTGAAGAAGATAACAATCAGGATGAGTATGACCCCATGGAGGC
AGAGGAGGCGGAGGAGGAGGAGGACGCGGACCTGTCTCCCCTTTGCTTTACAGACAGGGAGGAG
GAGGAAGTGAACAAACGAGACGACAAAAGGGACGTCAGCCGATACTGCAAGGACAGACCCTCAA
AGGACAAGGAAAAAGAGAAGCCTCAAATGGTCACAGTTAACAGGGATCTGCTAATGGCCTTTGT
TTATTTTGATCAAAGTCATTGTGGTTACCTTCTTGAAAAGGATTTGGAAGAAATACTTTATACT
CTTGGACTGCATCTTTCTCGGGCTCAGGTAAAGAAACTGCTCAATAAAGTAGTGCTCCGAGAAT
CGTGCTTCTATCGGAAATTAACAGACACCTCAAAAGACGGCGAGAGCCATGACGAGCCAGAGTC
GCTGCAGGGGGACACGACGCTGGGAAACAGGTTACTACTTCCCACACCAACAGTGAAGCAGGAA
TCGAAGGATGGAGAAGAAAACGTAGGGCTTATTGTGTACAACGGTGCAATGGTGGATGTTGGGA
GTCTCTTACAAAAGCTGGAAAAGAGTGAAAAAGTAAGAGCTGAGGTAGAACAGAAGCTCCAGTT
ACTAGAGGAGAAAACAGATGAAGACGGAAAAACTATATTAAACTTGGAGAATTCTAACAAAAGC
CTCTCTGGTGAACTTAGAGAGGTCAAAAAAGACCTTGGTCAATTACAAGAAAACTTGAAGGTTT
CAGAAAACATGAATTTGCAATTTGAAAACCAATTGAATAAAACACTCAGAAACTTATCCACAGT
CATGGATGATATCCACACTGTCCTAAAAAAGGATAACGTAAAGAATGAAGACAGAGATCAGAAA
TCCAAGGAGAATGGTTCAAGTGTATGATAAAATACATTTGGTGATGAGGAGTGGTGTTAAATAA
TGTACTATATAAAAATCATGACACAGGAATGTTTGAGGGCAATGCATGTTTGATTTTAGTAGTA
TAAACATATGTTAGTTCAAATGATGTATAAAGTTTTATGAATGTGAGTTTGCTTTTGAAAATTG
CCTGTAATTTCTAGCATTCAAATTAAATACTCACTGAGTGAAGAATTTTGCATTGCAAAATCTT
TTAGGATGAACTTTGTTATAGTTTTAACCCCAATAAAGTTCATCAGTTTAATTGACAATAACTT
GTAATTACTAAATGTCTTTTATTGAAATATCTAGACATTTTGCTTTTATTTATAGAACTATTGT
TTTATAGTTTTATAGTTCACTTTTTTTAGTGTCAGTATGTATCATAAAATAGCATGCTCCTTAA
TATTTGCAACCTTTTTGGACTAGTATTTTCAGTGTTTAAATGTAGTTGTTAAGCCGTCTGCTCA
TGGTGGCACATCCCATTAACCCCAGTGAGACACTGTCTCAGGAACAATGCAATTAATCCAAAAG
ACGCTGTGTAAAAGCCTACAACTGAGAAAGCGATCGAGCTAGCATTGTGCTTAGAGTTTACACA
AAGTAACCGTCTTGACAGTAGTTACTGTACTCAGTTAATTGTTTTACTTGCCCTGGATACTTCT
ATTTTAATTTTCAGAAGTTAAAAAGGAGGCAGTGGACATCAAATGCACAGCTTAGTGACAAGCC
AGTACATCGTCAGTTTGATTGATGCCTTAAGTTAAGTCATTAAAAAATATTTTTTTAA

hide sequence

RefSeq Acc Id:

XM_006256464 ⟹ XP_006256526

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	20	31,229,140 - 31,271,227 (-)	NCBI
mRatBN7.2	20	30,685,916 - 30,728,523 (-)	NCBI
Rnor_6.0	20	32,373,447 - 32,415,997 (-)	NCBI
Rnor_5.0	20	34,157,349 - 34,199,950 (-)	NCBI

Sequence:

show sequence

CGGCGTGGAGGAGGGGAGCAGTGTGCGCATGCGCCTGAGCTTGACGGGTTTTGAAATGGCTTCT
CTGTTAACCCCGGCCCGACTCAGGTGAAGATATCTGCTGTAGAAGAGAAGCAAGTGAAGGTTTC
CCCCCCTTGCATCATGGCTCAGTTTGGAGGACAGAAGAATCCTCCATGGGCTACTCAGTTTACA
GCCACGGCGGTGTCACAACCAGCTGCACTAGGTGTTCAGCAGCCATCACTTCTGGGAGCATCCC
CTACCATCTATACGCAGCAGACTGCATTGGCGGCCGCAGGCCTTACCACGCAGACGCCAGCAAA
CTATCAGTTAACACAAACTGCGGCACTGCAGCAGCAAGCTGCAGCTGTCTTACAGCAGCAATAT
TCACAACCTCAGCAGGCCTTGTATAGTGTGCAACAGCAGTTACAGCAACCCCAGCAGACCATTT
TAACACAGCCAGCTGTTGCATTGCCCACAAGCCTTAGCCTGTCTACTCCTCAGCCTGCAGCACA
GATTACTGTGTCCTATCCAACACCAAGGTCCAGTCAACAGCAGACTCAACCTCAGAAGCAGCGT
GTTTTCACAGGAGTGGTTACAAAACTACATGATACGTTTGGATTTGTGGATGAAGATGTATTCT
TTCAGCTTGGTGCTGTTAAAGGGAAAACCCCCCAAGTGGGTGATAGAGTCTTGGTTGAAGCAAC
CTATAATCCTAATATGCCTTTTAAATGGAATGCACAAAGAATTCAAACACTACCAAATCAGAAT
CAGTCACAAACCCAACCTTTACTGAAGACTCCTACTGCTGTTATCCAGCCGATTGTGCCACAGA
CAACATTTGGTGTTCAGGCACAGCCCCAACCCCAGTCATTATTGCAAGCCCAGATCTCAGCTGC
TTCTATTACACCCCTATTGCAGACGCAGCCACAGCCCTTACTACAGCAGCCACAGCAAAAAGCT
GGCTTATTGCAGCCTCCTGTCCGAATAGTATCACAGCCACAACCCGCACGGAGATTAGATCCGC
CATCTAGATTTTCAGGAAGAAATGACAGAGGGGATCAAGTACCTAATAGAAAAGATGACCGAAG
TCGTGAAAGGGACAGAGAAAGACGCAGATCCAGAGAAAGATCACCTCAGAGGAAACGTTCCCGG
GAGAGGTCGCCCCGGAGAGAAAGAGAGCGATCCCCTCGGAGAGTCCGCCGTGTCGTTCCACGGT
ACACAGTGCAGTTTTCAAAGTTTTCTTTAGATTGTCCCAGTTGTGACATGATGGAATTAAGGCG
CCGTTATCAGAACTTATATATTCCTAGTGACTTTTTTGATGCTCAGTTTACATGGGTGGATGCT
TTCCCTTTGTCAAGACCATTTCAACTGGGAAATTACTGCAATTTTTATGTGATGCACCGAGAAG
TGGAGTCCTTAGAAAAAAATGTGGCTGTTCTTGACCCACCTGATGCTGACCACCTGTACAGTGC
AAAGGTAATGCTGATGGCTAGCCCTAGTATGGAAGATTTGTATCATAAGTCATGTGCTCTTGCT
GAAGACCCACAAGACCTTCGTGATGGTTTTCAGCATCCTGCTAGACTTGTTAAGTTTCTAGTGG
GAATGAAAGGCAAGGATGAAGCCATGGCCATTGGAGGCCACTGGTCTCCTTCGCTGGATGGACC
AAACCCAGAAAAAGACCCCTCTGTGTTGATTAAGACTGCCATTCGTTGTTGTAAGGCCCTGACA
GGCATTGATCTAAGTGTGTGCACACAATGGTACCGTTTTGCAGAGATTCGCTACCATCGCCCTG
AGGAGACCCACAAGGGGCGTACAGTTCCAGCTCATGTGGAGACAGTGGTTTTATTTTTCCCGGA
TGTTTGGCATTGCCTTCCCACCCGCTCAGAGTGGGAAACCCTCTCCCGAGGATACAAGCAGCAG
CTGGTCGAGAAGCTTCAGGGTGAACGCAAGAAGGCTGATGGAGAACAGGATGAAGAAGAGAAGG
ATGATGGTGAAGTTAAAGAAATTGCTACTCCTACCCATTGGTCTAAACTTGATCCAAAGGCAAT
GAAGGAAGAAGAAAGAAAACGTCAAGAAGAAGTGGAACGCCAACGCCAAGAAAGAAGATACATT
TTGCCTGATGAGCCTGCCATAATTGTCCATCCAAACTGGGCTGCAAAAAGTGGGAAGTTTGATT
GCAGCATCATGTCTTTGAGTGTCCTTTTAGACTACAGATTGGAAGATAATAAAGAACATTCGTT
TGAGGTTTCATTGTTTGCAGAACTTTTCAATGAAATGCTTCAAAGAGATTTTGGGGTCAGAATA
TACAAATCATTACTCTCTCTTCCTGAGAAAGAGGACAAAAAAGATAAGGAAAAGAAAAGCAAAA
AAGAAGAGAGAAAAGATAAAAAAGAAGAGAGAGAAGATGATATTGATGAACCAAAACCAAAACG
GAGAAAATCGGGCGATGATAAAGACAAAAAAGAAGACAGAGATGAGAGGAAGAAAGAAGAGAAA
AGAAAAGATGATTCTAAGGATGATGATGAAACTGAAGAAGATAACAATCAGGATGAGTATGACC
CCATGGAGGCAGAGGAGGCGGAGGAGGAGGAGGACGCGGACCTGTCTCCCCTTTGCTTTACAGA
CAGGGAGGAGGAGGAAGTGAACAAACGAGACGACAAAAGGGACGTCAGCCGATACTGCAAGGAC
AGACCCTCAAAGGACAAGGAAAAAGAGAAGCCTCAAATGGTCACAGTTAACAGGGATCTGCTAA
TGGCCTTTGTTTATTTTGATCAAAGTCATTGTGGTTACCTTCTTGAAAAGGATTTGGAAGAAAT
ACTTTATACTCTTGGACTGCATCTTTCTCGGGCTCAGGTAAAGAAACTGCTCAATAAAGTAGTG
CTCCGAGAATCGTGCTTCTATCGGAAATTAACAGACACCTCAAAAGACGGCGAGAGCCATGACG
AGCCAGAGTCGCTGCAGGGGGACACGACGCTGGGAAACAGGTTACTACTTCCCACACCAACAGT
GAAGCAGGAATCGAAGGATGGAGAAGAAAACGTAGGGCTTATTGTGTACAACGGTGCAATGGTG
GATGTTGGGAGTCTCTTACAAAAGCTGGAAAAGAGTGAAAAAGTAAGAGCTGAGGTAGAACAGA
AGCTCCAGTTACTAGAGGAGAAAACAGATGAAGACGGAAAAACTATATTAAACTTGGAGAATTC
TAACAAAAGCCTCTCTGGTGAACTTAGAGAGGTCAAAAAAGACCTTGGTCAATTACAAGAAAAC
TTGAAGGTTTCAGAAAACATGAATTTGCAATTTGAAAACCAATTGAATAAAACACTCAGAAACT
TATCCACAGTCATGGATGATATCCACACTGTCCTAAAAAAGGATAACGTAAAGAATGAAGACAG
AGATCAGAAATCCAAGGAGAATGGTTCAAGTGTATGATAAAATACATTTGGTGATGAGGAGTGG
TGTTAAATAATGTACTATATAAAAATCATGACACAGGAATGTTTGAGGGCAATGCATGTTTGAT
TTTAGTAGTATAAACATATGTTAGTTCAAATGATGTATAAAGTTTTATGAATGTGAGTTTGCTT
TTGAAAATTGCCTGTAATTTCTAGCATTCAAATTAAATACTCACTGAGTGAAGAATTTTGCATT
GCAAAATCTTTTAGGATGAACTTTGTTATAGTTTTAACCCCAATAAAGTTCATCAGTTTAATTG
ACAATAACTTGTAATTACTAAATGTCTTTTATTGAAATATCTAGACATTTTGCTTTTATTTATA
GAACTATTGTTTTATAGTTTTATAGTTCACTTTTTTTAGTGTCAGTATGTATCATAAAATAGCA
TGCTCCTTAATATTTGCAACCTTTTTGGACTAGTATTTTCAGTGTTTAAATGTAGTTGTTAAGC
CGTCTGCTCATGGTGGCACATCCCATTAACCCCAGTGAGACACTGTCTCAGGAACAATGCAATT
AATCCAAAAGACGCTGTGTAAAAGCCTACAACTGAGAAAGCGATCGAGCTAGCATTGTGCTTAG
AGTTTACACAAAGTAACCGTCTTGACAGTAGTTACTGTACTCAGTTAATTGTTTTACTTGCCCT
GGATACTTCTATTTTAATTTTCAGAAGTTAAAAAGGAGGCAGTGGACATCAAATGCACAGCTTA
GTGACAAGCCAGTACATCGTCAGTTTGATTGATGCCTTAAGTTAAGTCATTAAAAAATATTTTT
TTAA

hide sequence

RefSeq Acc Id:

XM_008772894 ⟹ XP_008771116

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	20	31,229,140 - 31,271,211 (-)	NCBI
mRatBN7.2	20	30,685,916 - 30,728,510 (-)	NCBI
Rnor_6.0	20	32,373,447 - 32,415,983 (-)	NCBI

Sequence:

show sequence

GGAGCAGTGTGCGCATGCGCCTGAGCTTGACGGGTTTTGAAATGGCTTCTCTGTTAACCCCGGC
CCGACTCAGGTGAAGGTCTGATATCTGCTGTAGAAGAGAAGCAAGTGAAGGTTTCCCCCCCTTG
CATCATGGCTCAGTTTGGAGGACAGAAGAATCCTCCATGGGCTACTCAGTTTACAGCCACGGCG
GTGTCACAACCAGCTGCACTAGGTGTTCAGCAGCCATCACTTCTGGGAGCATCCCCTACCATCT
ATACGCAGCAGACTGCATTGGCGGCCGCAGGCCTTACCACGCAGACGCCAGCAAACTATCAGTT
AACACAAACTGCGGCACTGCAGCAGCAAGCTGCAGCTGTCTTACAGCAGCAATATTCACAACCT
CAGCAGGCCTTGTATAGTGTGCAACAGCAGTTACAGCAACCCCAGCAGACCATTTTAACACAGC
CAGCTGTTGCATTGCCCACAAGCCTTAGCCTGTCTACTCCTCAGCCTGCAGCACAGATTACTGT
GTCCTATCCAACACCAAGGTCCAGTCAACAGCAGACTCAACCTCAGAAGCAGCGTGTTTTCACA
GGAGTGGTTACAAAACTACATGATACGTTTGGATTTGTGGATGAAGATGTATTCTTTCAGCTTG
GTGCTGTTAAAGGGAAAACCCCCCAAGTGGGTGATAGAGTCTTGGTTGAAGCAACCTATAATCC
TAATATGCCTTTTAAATGGAATGCACAAAGAATTCAAACACTACCAAATCAGAATCAGTCACAA
ACCCAACCTTTACTGAAGACTCCTACTGCTGTTATCCAGCCGATTGTGCCACAGACAACATTTG
GTGTTCAGGCACAGCCCCAACCCCAGTCATTATTGCAAGCCCAGATCTCAGCTGCTTCTATTAC
ACCCCTATTGCAGACGCAGCCACAGCCCTTACTACAGCAGCCACAGCAAAAAGCTGGCTTATTG
CAGCCTCCTGTCCGAATAGTATCACAGCCACAACCCGCACGGAGATTAGATCCGCCATCTAGAT
TTTCAGGAAGAAATGACAGAGGGGATCAAGTACCTAATAGAAAAGATGACCGAAGTCGTGAAAG
GGACAGAGAAAGACGCAGATCCAGAGAAAGATCACCTCAGAGGAAACGTTCCCGGGAGAGGTCG
CCCCGGAGAGAAAGAGAGCGATCCCCTCGGAGAGTCCGCCGTGTCGTTCCACGGTACACAGTGC
AGTTTTCAAAGTTTTCTTTAGATTGTCCCAGTTGTGACATGATGGAATTAAGGCGCCGTTATCA
GAACTTATATATTCCTAGTGACTTTTTTGATGCTCAGTTTACATGGGTGGATGCTTTCCCTTTG
TCAAGACCATTTCAACTGGGAAATTACTGCAATTTTTATGTGATGCACCGAGAAGTGGAGTCCT
TAGAAAAAAATGTGGCTGTTCTTGACCCACCTGATGCTGACCACCTGTACAGTGCAAAGGTAAT
GCTGATGGCTAGCCCTAGTATGGAAGATTTGTATCATAAGTCATGTGCTCTTGCTGAAGACCCA
CAAGACCTTCGTGATGGTTTTCAGCATCCTGCTAGACTTGTTAAGTTTCTAGTGGGAATGAAAG
GCAAGGATGAAGCCATGGCCATTGGAGGCCACTGGTCTCCTTCGCTGGATGGACCAAACCCAGA
AAAAGACCCCTCTGTGTTGATTAAGACTGCCATTCGTTGTTGTAAGGCCCTGACAGGCATTGAT
CTAAGTGTGTGCACACAATGGTACCGTTTTGCAGAGATTCGCTACCATCGCCCTGAGGAGACCC
ACAAGGGGCGTACAGTTCCAGCTCATGTGGAGACAGTGGTTTTATTTTTCCCGGATGTTTGGCA
TTGCCTTCCCACCCGCTCAGAGTGGGAAACCCTCTCCCGAGGATACAAGCAGCAGCTGGTCGAG
AAGCTTCAGGGTGAACGCAAGAAGGCTGATGGAGAACAGGATGAAGAAGAGAAGGATGATGGTG
AAGTTAAAGAAATTGCTACTCCTACCCATTGGTCTAAACTTGATCCAAAGGCAATGAAGGTAAA
CGATCTCCGAAAAGAATTAGAAAGTCGAGCTCTTAGTTCCAAAGGACTAAAATCGCAGTTAATA
GCTCGCCTGACAAAGCAGCTTAAAATAGAAGAACAGAAAGAAGAGCAGAAGGAATTAGAGAAGT
CTGAAAAGGAAGAGGAAGATGAGGATGATAAGAAGTCTGAGGATGATAAAGAGGAAGAAGAAAG
AAAACGTCAAGAAGAAGTGGAACGCCAACGCCAAGAAAGAAGATACATTTTGCCTGATGAGCCT
GCCATAATTGTCCATCCAAACTGGGCTGCAAAAAGTGGGAAGTTTGATTGCAGCATCATGTCTT
TGAGTGTCCTTTTAGACTACAGATTGGAAGATAATAAAGAACATTCGTTTGAGGTTTCATTGTT
TGCAGAACTTTTCAATGAAATGCTTCAAAGAGATTTTGGGGTCAGAATATACAAATCATTACTC
TCTCTTCCTGAGAAAGAGGACAAAAAAGATAAGGAAAAGAAAAGCAAAAAAGAAGAGAGAAAAG
ATAAAAAAGAAGAGAGAGAAGATGATATTGATGAACCAAAACCAAAACGGAGAAAATCGGGCGA
TGATAAAGACAAAAAAGAAGACAGAGATGAGAGGAAGAAAGAAGAGAAAAGAAAAGATGATTCT
AAGGATGATGATGAAACTGAAGAAGATAACAATCAGGATGAGTATGACCCCATGGAGGCAGAGG
AGGCGGAGGAGGAGGAGGACGCGGACCTGTCTCCCCTTTGCTTTACAGACAGGGAGGAGGAGGA
AGTGAACAAACGAGACGACAAAAGGGACGTCAGCCGATACTGCAAGGACAGACCCTCAAAGGAC
AAGGAAAAAGAGAAGCCTCAAATGGTCACAGTTAACAGGGATCTGCTAATGGCCTTTGTTTATT
TTGATCAAAGTCATTGTGGTTACCTTCTTGAAAAGGATTTGGAAGAAATACTTTATACTCTTGG
ACTGCATCTTTCTCGGGCTCAGGTAAAGAAACTGCTCAATAAAGTAGTGCTCCGAGAATCGTGC
TTCTATCGGAAATTAACAGACACCTCAAAAGACGGCGAGAGCCATGACGAGCCAGAGTCGCTGC
AGGGGGACACGACGCTGGGAAACAGGTTACTACTTCCCACACCAACAGTGAAGCAGGAATCGAA
GGATGGAGAAGAAAACGTAGGGCTTATTGTGTACAACGGTGCAATGGTGGATGTTGGGAGTCTC
TTACAAAAGCTGGAAAAGAGTGAAAAAGTAAGAGCTGAGGTAGAACAGAAGCTCCAGTTACTAG
AGGAGAAAACAGATGAAGACGGAAAAACTATATTAAACTTGGAGAATTCTAACAAAAGCCTCTC
TGGTGAACTTAGAGAGGTCAAAAAAGACCTTGGTCAATTACAAGAAAACTTGAAGGTTTCAGAA
AACATGAATTTGCAATTTGAAAACCAATTGAATAAAACACTCAGAAACTTATCCACAGTCATGG
ATGATATCCACACTGTCCTAAAAAAGGATAACGTAAAGAATGAAGACAGAGATCAGAAATCCAA
GGAGAATGGTTCAAGTGTATGATAAAATACATTTGGTGATGAGGAGTGGTGTTAAATAATGTAC
TATATAAAAATCATGACACAGGAATGTTTGAGGGCAATGCATGTTTGATTTTAGTAGTATAAAC
ATATGTTAGTTCAAATGATGTATAAAGTTTTATGAATGTGAGTTTGCTTTTGAAAATTGCCTGT
AATTTCTAGCATTCAAATTAAATACTCACTGAGTGAAGAATTTTGCATTGCAAAATCTTTTAGG
ATGAACTTTGTTATAGTTTTAACCCCAATAAAGTTCATCAGTTTAATTGACAATAACTTGTAAT
TACTAAATGTCTTTTATTGAAATATCTAGACATTTTGCTTTTATTTATAGAACTATTGTTTTAT
AGTTTTATAGTTCACTTTTTTTAGTGTCAGTATGTATCATAAAATAGCATGCTCCTTAATATTT
GCAACCTTTTTGGACTAGTATTTTCAGTGTTTAAATGTAGTTGTTAAGCCGTCTGCTCATGGTG
GCACATCCCATTAACCCCAGTGAGACACTGTCTCAGGAACAATGCAATTAATCCAAAAGACGCT
GTGTAAAAGCCTACAACTGAGAAAGCGATCGAGCTAGCATTGTGCTTAGAGTTTACACAAAGTA
ACCGTCTTGACAGTAGTTACTGTACTCAGTTAATTGTTTTACTTGCCCTGGATACTTCTATTTT
AATTTTCAGAAGTTAAAAAGGAGGCAGTGGACATCAAATGCACAGCTTAGTGACAAGCCAGTAC
ATCGTCAGTTTGATTGATGCCTTAAGTTAAGTCATTAAAAAATATTTTTTTAA

hide sequence

RefSeq Acc Id:

XM_008772897 ⟹ XP_008771119

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	20	31,229,140 - 31,263,893 (-)	NCBI
mRatBN7.2	20	30,685,916 - 30,721,195 (-)	NCBI
Rnor_6.0	20	32,373,447 - 32,408,715 (-)	NCBI

Sequence:

show sequence

CAATATTCACAACCTCAGCAGGCCTTGTATAGTGTGCAACAGCAGTTACAGCAACCCCAGCAGA
CCATTTTAACACAGTGCTGTTAAAGGGAAAACCCCCCAAGTGGGTGATAGAGTCTTGGTTGAAG
CAACCTATAATCCTAATATGCCTTTTAAATGGAATGCACAAAGAATTCAAACACTACCAAATCA
GAATCAGTCACAAACCCAACCTTTACTGAAGACTCCTACTGCTGTTATCCAGCCGATTGTGCCA
CAGACAACATTTGGTGTTCAGGCACAGCCCCAACCCCAGTCATTATTGCAAGCCCAGATCTCAG
CTGCTTCTATTACACCCCTATTGCAGACGCAGCCACAGCCCTTACTACAGCAGCCACAGCAAAA
AGCTGGCTTATTGCAGCCTCCTGTCCGAATAGTATCACAGCCACAACCCGCACGGAGATTAGAT
CCGCCATCTAGATTTTCAGGAAGAAATGACAGAGGGGATCAAGTACCTAATAGAAAAGATGACC
GAAGTCGTGAAAGGGACAGAGAAAGACGCAGATCCAGAGAAAGATCACCTCAGAGGAAACGTTC
CCGGGAGAGGTCGCCCCGGAGAGAAAGAGAGCGATCCCCTCGGAGAGTCCGCCGTGTCGTTCCA
CGGTACACAGTGCAGTTTTCAAAGTTTTCTTTAGATTGTCCCAGTTGTGACATGATGGAATTAA
GGCGCCGTTATCAGAACTTATATATTCCTAGTGACTTTTTTGATGCTCAGTTTACATGGGTGGA
TGCTTTCCCTTTGTCAAGACCATTTCAACTGGGAAATTACTGCAATTTTTATGTGATGCACCGA
GAAGTGGAGTCCTTAGAAAAAAATGTGGCTGTTCTTGACCCACCTGATGCTGACCACCTGTACA
GTGCAAAGGTAATGCTGATGGCTAGCCCTAGTATGGAAGATTTGTATCATAAGTCATGTGCTCT
TGCTGAAGACCCACAAGACCTTCGTGATGGTTTTCAGCATCCTGCTAGACTTGTTAAGTTTCTA
GTGGGAATGAAAGGCAAGGATGAAGCCATGGCCATTGGAGGCCACTGGTCTCCTTCGCTGGATG
GACCAAACCCAGAAAAAGACCCCTCTGTGTTGATTAAGACTGCCATTCGTTGTTGTAAGGCCCT
GACAGGCATTGATCTAAGTGTGTGCACACAATGGTACCGTTTTGCAGAGATTCGCTACCATCGC
CCTGAGGAGACCCACAAGGGGCGTACAGTTCCAGCTCATGTGGAGACAGTGGTTTTATTTTTCC
CGGATGTTTGGCATTGCCTTCCCACCCGCTCAGAGTGGGAAACCCTCTCCCGAGGATACAAGCA
GCAGCTGGTCGAGAAGCTTCAGGGTGAACGCAAGAAGGCTGATGGAGAACAGGATGAAGAAGAG
AAGGATGATGGTGAAGTTAAAGAAATTGCTACTCCTACCCATTGGTCTAAACTTGATCCAAAGG
CAATGAAGGTAAACGATCTCCGAAAAGAATTAGAAAGTCGAGCTCTTAGTTCCAAAGGACTAAA
ATCGCAGTTAATAGCTCGCCTGACAAAGCAGCTTAAAATAGAAGAACAGAAAGAAGAGCAGAAG
GAATTAGAGAAGTCTGAAAAGGAAGAGGAAGATGAGGATGATAAGAAGTCTGAGGATGATAAAG
AGGAAGAAGAAAGAAAACGTCAAGAAGAAGTGGAACGCCAACGCCAAGAAAGAAGATACATTTT
GCCTGATGAGCCTGCCATAATTGTCCATCCAAACTGGGCTGCAAAAAGTGGGAAGTTTGATTGC
AGCATCATGTCTTTGAGTGTCCTTTTAGACTACAGATTGGAAGATAATAAAGAACATTCGTTTG
AGGTTTCATTGTTTGCAGAACTTTTCAATGAAATGCTTCAAAGAGATTTTGGGGTCAGAATATA
CAAATCATTACTCTCTCTTCCTGAGAAAGAGGACAAAAAAGATAAGGAAAAGAAAAGCAAAAAA
GAAGAGAGAAAAGATAAAAAAGAAGAGAGAGAAGATGATATTGATGAACCAAAACCAAAACGGA
GAAAATCGGGCGATGATAAAGACAAAAAAGAAGACAGAGATGAGAGGAAGAAAGAAGAGAAAAG
AAAAGATGATTCTAAGGATGATGATGAAACTGAAGAAGATAACAATCAGGATGAGTATGACCCC
ATGGAGGCAGAGGAGGCGGAGGAGGAGGAGGACGCGGACCTGTCTCCCCTTTGCTTTACAGACA
GGGAGGAGGAGGAAGTGAACAAACGAGACGACAAAAGGGACGTCAGCCGATACTGCAAGGACAG
ACCCTCAAAGGACAAGGAAAAAGAGAAGCCTCAAATGGTCACAGTTAACAGGGATCTGCTAATG
GCCTTTGTTTATTTTGATCAAAGTCATTGTGGTTACCTTCTTGAAAAGGATTTGGAAGAAATAC
TTTATACTCTTGGACTGCATCTTTCTCGGGCTCAGGTAAAGAAACTGCTCAATAAAGTAGTGCT
CCGAGAATCGTGCTTCTATCGGAAATTAACAGACACCTCAAAAGACGGCGAGAGCCATGACGAG
CCAGAGTCGCTGCAGGGGGACACGACGCTGGGAAACAGGTTACTACTTCCCACACCAACAGTGA
AGCAGGAATCGAAGGATGGAGAAGAAAACGTAGGGCTTATTGTGTACAACGGTGCAATGGTGGA
TGTTGGGAGTCTCTTACAAAAGCTGGAAAAGAGTGAAAAAGTAAGAGCTGAGGTAGAACAGAAG
CTCCAGTTACTAGAGGAGAAAACAGATGAAGACGGAAAAACTATATTAAACTTGGAGAATTCTA
ACAAAAGCCTCTCTGGTGAACTTAGAGAGGTCAAAAAAGACCTTGGTCAATTACAAGAAAACTT
GAAGGTTTCAGAAAACATGAATTTGCAATTTGAAAACCAATTGAATAAAACACTCAGAAACTTA
TCCACAGTCATGGATGATATCCACACTGTCCTAAAAAAGGATAACGTAAAGAATGAAGACAGAG
ATCAGAAATCCAAGGAGAATGGTTCAAGTGTATGATAAAATACATTTGGTGATGAGGAGTGGTG
TTAAATAATGTACTATATAAAAATCATGACACAGGAATGTTTGAGGGCAATGCATGTTTGATTT
TAGTAGTATAAACATATGTTAGTTCAAATGATGTATAAAGTTTTATGAATGTGAGTTTGCTTTT
GAAAATTGCCTGTAATTTCTAGCATTCAAATTAAATACTCACTGAGTGAAGAATTTTGCATTGC
AAAATCTTTTAGGATGAACTTTGTTATAGTTTTAACCCCAATAAAGTTCATCAGTTTAATTGAC
AATAACTTGTAATTACTAAATGTCTTTTATTGAAATATCTAGACATTTTGCTTTTATTTATAGA
ACTATTGTTTTATAGTTTTATAGTTCACTTTTTTTAGTGTCAGTATGTATCATAAAATAGCATG
CTCCTTAATATTTGCAACCTTTTTGGACTAGTATTTTCAGTGTTTAAATGTAGTTGTTAAGCCG
TCTGCTCATGGTGGCACATCCCATTAACCCCAGTGAGACACTGTCTCAGGAACAATGCAATTAA
TCCAAAAGACGCTGTGTAAAAGCCTACAACTGAGAAAGCGATCGAGCTAGCATTGTGCTTAGAG
TTTACACAAAGTAACCGTCTTGACAGTAGTTACTGTACTCAGTTAATTGTTTTACTTGCCCTGG
ATACTTCTATTTTAATTTTCAGAAGTTAAAAAGGAGGCAGTGGACATCAAATGCACAGCTTAGT
GACAAGCCAGTACATCGTCAGTTTGATTGATGCCTTAAGTTAAGTCATTAAAAAATATTTTTTT
AA

hide sequence

RefSeq Acc Id:

XM_039098883 ⟹ XP_038954811

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	20	31,229,140 - 31,271,227 (-)	NCBI
mRatBN7.2	20	30,685,916 - 30,728,523 (-)	NCBI

RefSeq Acc Id:

XM_063279303 ⟹ XP_063135373

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	20	31,229,140 - 31,270,845 (-)	NCBI

RefSeq Acc Id:

XM_063279304 ⟹ XP_063135374

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	20	31,229,140 - 31,270,893 (-)	NCBI

RefSeq Acc Id:

XM_063279305 ⟹ XP_063135375

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	20	31,229,140 - 31,271,100 (-)	NCBI

RefSeq Acc Id:

XM_063279306 ⟹ XP_063135376

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	20	31,229,140 - 31,271,233 (-)	NCBI

RefSeq Acc Id:

XM_063279307 ⟹ XP_063135377

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	20	31,229,140 - 31,271,233 (-)	NCBI

RefSeq Acc Id:

XM_063279308 ⟹ XP_063135378

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	20	31,229,140 - 31,271,233 (-)	NCBI

RefSeq Acc Id:

XM_063279309 ⟹ XP_063135379

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	20	31,229,140 - 31,271,211 (-)	NCBI

RefSeq Acc Id:

XM_063279310 ⟹ XP_063135380

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	20	31,229,140 - 31,270,891 (-)	NCBI

RefSeq Acc Id:

XM_063279311 ⟹ XP_063135381

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	20	31,229,140 - 31,271,227 (-)	NCBI

Protein Sequences


Protein RefSeqs	NP_001102005	(Get FASTA)	NCBI Sequence Viewer
	NP_001421572	(Get FASTA)	NCBI Sequence Viewer
	NP_001421573	(Get FASTA)	NCBI Sequence Viewer
	XP_006256524	(Get FASTA)	NCBI Sequence Viewer
	XP_006256525	(Get FASTA)	NCBI Sequence Viewer
	XP_006256526	(Get FASTA)	NCBI Sequence Viewer
	XP_008771116	(Get FASTA)	NCBI Sequence Viewer
	XP_008771119	(Get FASTA)	NCBI Sequence Viewer
	XP_038954811	(Get FASTA)	NCBI Sequence Viewer
	XP_063135373	(Get FASTA)	NCBI Sequence Viewer
	XP_063135374	(Get FASTA)	NCBI Sequence Viewer
	XP_063135375	(Get FASTA)	NCBI Sequence Viewer
	XP_063135376	(Get FASTA)	NCBI Sequence Viewer
	XP_063135377	(Get FASTA)	NCBI Sequence Viewer
	XP_063135378	(Get FASTA)	NCBI Sequence Viewer
	XP_063135379	(Get FASTA)	NCBI Sequence Viewer
	XP_063135380	(Get FASTA)	NCBI Sequence Viewer
	XP_063135381	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	EDL92955	(Get FASTA)	NCBI Sequence Viewer
	EDL92956	(Get FASTA)	NCBI Sequence Viewer
	EDL92957	(Get FASTA)	NCBI Sequence Viewer
	EDL92958	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000059432.3
	ENSRNOP00000085003.1

RefSeq Acc Id:

NP_001102005 ⟸ NM_001108535

- UniProtKB:

A6K465 (UniProtKB/TrEMBL), A0A8I6A183 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MAQFGGQKNPPWATQFTATAVSQPAALGVQQPSLLGASPTIYTQQTALAAAGLTTQTPANYQLT
QTAALQQQAAAVLQQQYSQPQQALYSVQQQLQQPQQTILTQPAVALPTSLSLSTPQPAAQITVS
YPTPRSSQQQTQPQKQRVFTGVVTKLHDTFGFVDEDVFFQLGAVKGKTPQVGDRVLVEATYNPN
MPFKWNAQRIQTLPNQNQSQTQPLLKTPTAVIQPIVPQTTFGVQAQPQPQSLLQAQISAASITP
LLQTQPQPLLQQPQQKAGLLQPPVRIVSQPQPARRLDPPSRFSGRNDRGDQVPNRKDDRSRERD
RERRRSRERSPQRKRSRERSPRRERERSPRRVRRVVPRYTVQFSKFSLDCPSCDMMELRRRYQN
LYIPSDFFDAQFTWVDAFPLSRPFQLGNYCNFYVMHREVESLEKNVAVLDPPDADHLYSAKVML
MASPSMEDLYHKSCALAEDPQDLRDGFQHPARLVKFLVGMKGKDEAMAIGGHWSPSLDGPNPEK
DPSVLIKTAIRCCKALTGIDLSVCTQWYRFAEIRYHRPEETHKGRTVPAHVETVVLFFPDVWHC
LPTRSEWETLSRGYKQQLVEKLQGERKKADGEQDEEEKDDGEVKEIATPTHWSKLDPKAMKVND
LRKELESRALSSKGLKSQLIARLTKQLKIEEQKEEQKELEKSEKEEEDEDDKKSEDDKEEEERK
RQEEVERQRQERRYILPDEPAIIVHPNWAAKSGKFDCSIMSLSVLLDYRLEDNKEHSFEVSLFA
ELFNEMLQRDFGVRIYKSLLSLPEKEDKKDKEKKSKKEERKDKKEEREDDIDEPKPKRRKSGDD
KDKKEDRDERKKEEKRKDDSKDDDETEEDNNQDEYDPMEAEEAEEEEDDREEEEVNKRDDKRDV
SRYCKDRPSKDKEKEKPQMVTVNRDLLMAFVYFDQSHCGYLLEKDLEEILYTLGLHLSRAQVKK
LLNKVVLRESCFYRKLTDTSKDGESHDEPESLQGDTTLGNRLLLPTPTVKQESKDGEENVGLIV
YNGAMVDVGSLLQKLEKSEKVRAEVEQKLQLLEEKTDEDGKTILNLENSNKSLSGELREVKKDL
GQLQENLKVSENMNLQFENQLNKTLRNLSTVMDDIHTVLKKDNVKNEDRDQKSKENGSSV

hide sequence

RefSeq Acc Id:	XP_006256525 ⟸ XM_006256463
- Peptide Label:	isoform X1
- UniProtKB:	D4A2P1 (UniProtKB/TrEMBL), A0A8I6A183 (UniProtKB/TrEMBL)
- Sequence:	show sequence MAQFGGQKNPPWATQFTATAVSQPAALGVQQPSLLGASPTIYTQQTALAAAGLTTQTPANYQLT QTAALQQQAAAVLQQQYSQPQQALYSVQQQLQQPQQTILTQPAVALPTSLSLSTPQPAAQITVS YPTPRSSQQQTQPQKQRVFTGVVTKLHDTFGFVDEDVFFQLGAVKGKTPQVGDRVLVEATYNPN MPFKWNAQRIQTLPNQNQSQTQPLLKTPTAVIQPIVPQTTFGVQAQPQPQSLLQAQISAASITP LLQTQPQPLLQQPQQKAGLLQPPVRIVSQPQPARRLDPPSRFSGRNDRGDQVPNRKDDRSRERD RERRRSRERSPQRKRSRERSPRRERERSPRRVRRVVPRYTVQFSKFSLDCPSCDMMELRRRYQN LYIPSDFFDAQFTWVDAFPLSRPFQLGNYCNFYVMHREVESLEKNVAVLDPPDADHLYSAKVML MASPSMEDLYHKSCALAEDPQDLRDGFQHPARLVKFLVGMKGKDEAMAIGGHWSPSLDGPNPEK DPSVLIKTAIRCCKALTGIDLSVCTQWYRFAEIRYHRPEETHKGRTVPAHVETVVLFFPDVWHC LPTRSEWETLSRGYKQQLVEKLQGERKKADGEQDEEEKDDGEVKEIATPTHWSKLDPKAMKVND LRKELESRALSSKGLKSQLIARLTKQLKIEEQKEEQKELEKSEKEEEDEDDKKSEDDKEEEERK RQEEVERQRQERRYILPDEPAIIVHPNWAAKSGKFDCSIMSLSVLLDYRLEDNKEHSFEVSLFA ELFNEMLQRDFGVRIYKSLLSLPEKEDKKDKEKKSKKEERKDKKEEREDDIDEPKPKRRKSGDD KDKKEDRDERKKEEKRKDDSKDDDETEEDNNQDEYDPMEAEEAEEEEDADLSPLCFTDREEEEV NKRDDKRDVSRYCKDRPSKDKEKEKPQMVTVNRDLLMAFVYFDQSHCGYLLEKDLEEILYTLGL HLSRAQVKKLLNKVVLRESCFYRKLTDTSKDGESHDEPESLQGDTTLGNRLLLPTPTVKQESKD GEENVGLIVYNGAMVDVGSLLQKLEKSEKVRAEVEQKLQLLEEKTDEDGKTILNLENSNKSLSG ELREVKKDLGQLQENLKVSENMNLQFENQLNKTLRNLSTVMDDIHTVLKKDNVKNEDRDQKSKE NGSSV hide sequence

RefSeq Acc Id:

XP_006256524 ⟸ XM_006256462

- Peptide Label:

isoform X1

- Sequence:

show sequence

MAQFGGQKNPPWATQFTATAVSQPAALGVQQPSLLGASPTIYTQQTALAAAGLTTQTPANYQLT
QTAALQQQAAAVLQQQYSQPQQALYSVQQQLQQPQQTILTQPAVALPTSLSLSTPQPAAQITVS
YPTPRSSQQQTQPQKQRVFTGVVTKLHDTFGFVDEDVFFQLGAVKGKTPQVGDRVLVEATYNPN
MPFKWNAQRIQTLPNQNQSQTQPLLKTPTAVIQPIVPQTTFGVQAQPQPQSLLQAQISAASITP
LLQTQPQPLLQQPQQKAGLLQPPVRIVSQPQPARRLDPPSRFSGRNDRGDQVPNRKDDRSRERD
RERRRSRERSPQRKRSRERSPRRERERSPRRVRRVVPRYTVQFSKFSLDCPSCDMMELRRRYQN
LYIPSDFFDAQFTWVDAFPLSRPFQLGNYCNFYVMHREVESLEKNVAVLDPPDADHLYSAKVML
MASPSMEDLYHKSCALAEDPQDLRDGFQHPARLVKFLVGMKGKDEAMAIGGHWSPSLDGPNPEK
DPSVLIKTAIRCCKALTGIDLSVCTQWYRFAEIRYHRPEETHKGRTVPAHVETVVLFFPDVWHC
LPTRSEWETLSRGYKQQLVEKLQGERKKADGEQDEEEKDDGEVKEIATPTHWSKLDPKAMKVND
LRKELESRALSSKGLKSQLIARLTKQLKIEEQKEEQKELEKSEKEEEDEDDKKSEDDKEEEERK
RQEEVERQRQERRYILPDEPAIIVHPNWAAKSGKFDCSIMSLSVLLDYRLEDNKEHSFEVSLFA
ELFNEMLQRDFGVRIYKSLLSLPEKEDKKDKEKKSKKEERKDKKEEREDDIDEPKPKRRKSGDD
KDKKEDRDERKKEEKRKDDSKDDDETEEDNNQDEYDPMEAEEAEEEEDADLSPLCFTDREEEEV
NKRDDKRDVSRYCKDRPSKDKEKEKPQMVTVNRDLLMAFVYFDQSHCGYLLEKDLEEILYTLGL
HLSRAQVKKLLNKVVLRESCFYRKLTDTSKDGESHDEPESLQGDTTLGNRLLLPTPTVKQESKD
GEENVGLIVYNGAMVDVGSLLQKLEKSEKVRAEVEQKLQLLEEKTDEDGKTILNLENSNKSLSG
ELREVKKDLGQLQENLKVSENMNLQFENQLNKTLRNLSTVMDDIHTVLKKDNVKNEDRDQKSKE
NGSSV

hide sequence

RefSeq Acc Id:

XP_006256526 ⟸ XM_006256464

- Peptide Label:

isoform X4

- Sequence:

show sequence

MAQFGGQKNPPWATQFTATAVSQPAALGVQQPSLLGASPTIYTQQTALAAAGLTTQTPANYQLT
QTAALQQQAAAVLQQQYSQPQQALYSVQQQLQQPQQTILTQPAVALPTSLSLSTPQPAAQITVS
YPTPRSSQQQTQPQKQRVFTGVVTKLHDTFGFVDEDVFFQLGAVKGKTPQVGDRVLVEATYNPN
MPFKWNAQRIQTLPNQNQSQTQPLLKTPTAVIQPIVPQTTFGVQAQPQPQSLLQAQISAASITP
LLQTQPQPLLQQPQQKAGLLQPPVRIVSQPQPARRLDPPSRFSGRNDRGDQVPNRKDDRSRERD
RERRRSRERSPQRKRSRERSPRRERERSPRRVRRVVPRYTVQFSKFSLDCPSCDMMELRRRYQN
LYIPSDFFDAQFTWVDAFPLSRPFQLGNYCNFYVMHREVESLEKNVAVLDPPDADHLYSAKVML
MASPSMEDLYHKSCALAEDPQDLRDGFQHPARLVKFLVGMKGKDEAMAIGGHWSPSLDGPNPEK
DPSVLIKTAIRCCKALTGIDLSVCTQWYRFAEIRYHRPEETHKGRTVPAHVETVVLFFPDVWHC
LPTRSEWETLSRGYKQQLVEKLQGERKKADGEQDEEEKDDGEVKEIATPTHWSKLDPKAMKEEE
RKRQEEVERQRQERRYILPDEPAIIVHPNWAAKSGKFDCSIMSLSVLLDYRLEDNKEHSFEVSL
FAELFNEMLQRDFGVRIYKSLLSLPEKEDKKDKEKKSKKEERKDKKEEREDDIDEPKPKRRKSG
DDKDKKEDRDERKKEEKRKDDSKDDDETEEDNNQDEYDPMEAEEAEEEEDADLSPLCFTDREEE
EVNKRDDKRDVSRYCKDRPSKDKEKEKPQMVTVNRDLLMAFVYFDQSHCGYLLEKDLEEILYTL
GLHLSRAQVKKLLNKVVLRESCFYRKLTDTSKDGESHDEPESLQGDTTLGNRLLLPTPTVKQES
KDGEENVGLIVYNGAMVDVGSLLQKLEKSEKVRAEVEQKLQLLEEKTDEDGKTILNLENSNKSL
SGELREVKKDLGQLQENLKVSENMNLQFENQLNKTLRNLSTVMDDIHTVLKKDNVKNEDRDQKS
KENGSSV

hide sequence

RefSeq Acc Id:	XP_008771116 ⟸ XM_008772894
- Peptide Label:	isoform X1
- UniProtKB:	D4A2P1 (UniProtKB/TrEMBL), A0A8I6A183 (UniProtKB/TrEMBL)
- Sequence:	show sequence MAQFGGQKNPPWATQFTATAVSQPAALGVQQPSLLGASPTIYTQQTALAAAGLTTQTPANYQLT QTAALQQQAAAVLQQQYSQPQQALYSVQQQLQQPQQTILTQPAVALPTSLSLSTPQPAAQITVS YPTPRSSQQQTQPQKQRVFTGVVTKLHDTFGFVDEDVFFQLGAVKGKTPQVGDRVLVEATYNPN MPFKWNAQRIQTLPNQNQSQTQPLLKTPTAVIQPIVPQTTFGVQAQPQPQSLLQAQISAASITP LLQTQPQPLLQQPQQKAGLLQPPVRIVSQPQPARRLDPPSRFSGRNDRGDQVPNRKDDRSRERD RERRRSRERSPQRKRSRERSPRRERERSPRRVRRVVPRYTVQFSKFSLDCPSCDMMELRRRYQN LYIPSDFFDAQFTWVDAFPLSRPFQLGNYCNFYVMHREVESLEKNVAVLDPPDADHLYSAKVML MASPSMEDLYHKSCALAEDPQDLRDGFQHPARLVKFLVGMKGKDEAMAIGGHWSPSLDGPNPEK DPSVLIKTAIRCCKALTGIDLSVCTQWYRFAEIRYHRPEETHKGRTVPAHVETVVLFFPDVWHC LPTRSEWETLSRGYKQQLVEKLQGERKKADGEQDEEEKDDGEVKEIATPTHWSKLDPKAMKVND LRKELESRALSSKGLKSQLIARLTKQLKIEEQKEEQKELEKSEKEEEDEDDKKSEDDKEEEERK RQEEVERQRQERRYILPDEPAIIVHPNWAAKSGKFDCSIMSLSVLLDYRLEDNKEHSFEVSLFA ELFNEMLQRDFGVRIYKSLLSLPEKEDKKDKEKKSKKEERKDKKEEREDDIDEPKPKRRKSGDD KDKKEDRDERKKEEKRKDDSKDDDETEEDNNQDEYDPMEAEEAEEEEDADLSPLCFTDREEEEV NKRDDKRDVSRYCKDRPSKDKEKEKPQMVTVNRDLLMAFVYFDQSHCGYLLEKDLEEILYTLGL HLSRAQVKKLLNKVVLRESCFYRKLTDTSKDGESHDEPESLQGDTTLGNRLLLPTPTVKQESKD GEENVGLIVYNGAMVDVGSLLQKLEKSEKVRAEVEQKLQLLEEKTDEDGKTILNLENSNKSLSG ELREVKKDLGQLQENLKVSENMNLQFENQLNKTLRNLSTVMDDIHTVLKKDNVKNEDRDQKSKE NGSSV hide sequence

RefSeq Acc Id:	XP_008771119 ⟸ XM_008772897
- Peptide Label:	isoform X7
- UniProtKB:	A0A8I6A183 (UniProtKB/TrEMBL)
- Sequence:	show sequence MPFKWNAQRIQTLPNQNQSQTQPLLKTPTAVIQPIVPQTTFGVQAQPQPQSLLQAQISAASITP LLQTQPQPLLQQPQQKAGLLQPPVRIVSQPQPARRLDPPSRFSGRNDRGDQVPNRKDDRSRERD RERRRSRERSPQRKRSRERSPRRERERSPRRVRRVVPRYTVQFSKFSLDCPSCDMMELRRRYQN LYIPSDFFDAQFTWVDAFPLSRPFQLGNYCNFYVMHREVESLEKNVAVLDPPDADHLYSAKVML MASPSMEDLYHKSCALAEDPQDLRDGFQHPARLVKFLVGMKGKDEAMAIGGHWSPSLDGPNPEK DPSVLIKTAIRCCKALTGIDLSVCTQWYRFAEIRYHRPEETHKGRTVPAHVETVVLFFPDVWHC LPTRSEWETLSRGYKQQLVEKLQGERKKADGEQDEEEKDDGEVKEIATPTHWSKLDPKAMKVND LRKELESRALSSKGLKSQLIARLTKQLKIEEQKEEQKELEKSEKEEEDEDDKKSEDDKEEEERK RQEEVERQRQERRYILPDEPAIIVHPNWAAKSGKFDCSIMSLSVLLDYRLEDNKEHSFEVSLFA ELFNEMLQRDFGVRIYKSLLSLPEKEDKKDKEKKSKKEERKDKKEEREDDIDEPKPKRRKSGDD KDKKEDRDERKKEEKRKDDSKDDDETEEDNNQDEYDPMEAEEAEEEEDADLSPLCFTDREEEEV NKRDDKRDVSRYCKDRPSKDKEKEKPQMVTVNRDLLMAFVYFDQSHCGYLLEKDLEEILYTLGL HLSRAQVKKLLNKVVLRESCFYRKLTDTSKDGESHDEPESLQGDTTLGNRLLLPTPTVKQESKD GEENVGLIVYNGAMVDVGSLLQKLEKSEKVRAEVEQKLQLLEEKTDEDGKTILNLENSNKSLSG ELREVKKDLGQLQENLKVSENMNLQFENQLNKTLRNLSTVMDDIHTVLKKDNVKNEDRDQKSKE NGSSV hide sequence

Ensembl Acc Id:

ENSRNOP00000059432 ⟸ ENSRNOT00000067004

RefSeq Acc Id:	XP_038954811 ⟸ XM_039098883
- Peptide Label:	isoform X3
- UniProtKB:	A0A8I6A183 (UniProtKB/TrEMBL)

Ensembl Acc Id:

ENSRNOP00000085003 ⟸ ENSRNOT00000097504

RefSeq Acc Id:	XP_063135377 ⟸ XM_063279307
- Peptide Label:	isoform X3
- UniProtKB:	A0A8I6A183 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063135378 ⟸ XM_063279308
- Peptide Label:	isoform X4
- UniProtKB:	A0A8I6A183 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063135376 ⟸ XM_063279306
- Peptide Label:	isoform X2
- UniProtKB:	A6K465 (UniProtKB/TrEMBL), A0A8I6A183 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063135381 ⟸ XM_063279311
- Peptide Label:	isoform X6
- UniProtKB:	A0A8I6A183 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063135379 ⟸ XM_063279309
- Peptide Label:	isoform X4
- UniProtKB:	A0A8I6A183 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063135375 ⟸ XM_063279305
- Peptide Label:	isoform X1
- UniProtKB:	D4A2P1 (UniProtKB/TrEMBL), A0A8I6A183 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063135374 ⟸ XM_063279304
- Peptide Label:	isoform X1
- UniProtKB:	D4A2P1 (UniProtKB/TrEMBL), A0A8I6A183 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063135380 ⟸ XM_063279310
- Peptide Label:	isoform X5
- UniProtKB:	A0A8I6A183 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063135373 ⟸ XM_063279303
- Peptide Label:	isoform X1
- UniProtKB:	D4A2P1 (UniProtKB/TrEMBL), A0A8I6A183 (UniProtKB/TrEMBL)

Protein Domains

SAP

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-D4A2P1-F1-model_v2	AlphaFold	D4A2P1	1-1148	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Promoters

RGD ID:

13701618

Promoter ID:

EPDNEW_R12142

Type:

multiple initiation site

Name:

Ccar1_1

Description:

cell division cycle and apoptosis regulator 1

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0	20	32,415,978 - 32,416,038	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1560358	AgrOrtholog
BioCyc Gene	G2FUF-3675	BioCyc
Ensembl Genes	ENSRNOG00000000397	Ensembl, UniProtKB/TrEMBL
Ensembl Transcript	ENSRNOT00000067004.3	UniProtKB/TrEMBL
	ENSRNOT00000097504.1	UniProtKB/TrEMBL
Gene3D-CATH	1.10.720.30	UniProtKB/TrEMBL
InterPro	BURAN	UniProtKB/TrEMBL
	DBC1/CARP1	UniProtKB/TrEMBL
	DBC1/CARP1_inactive_NUDIX_dom	UniProtKB/TrEMBL
	EF-hand-dom_pair	UniProtKB/TrEMBL
	LAIKA	UniProtKB/TrEMBL
	S1-like_RNA_bd_dom	UniProtKB/TrEMBL
	SAP_dom	UniProtKB/TrEMBL
	SAP_dom_sf	UniProtKB/TrEMBL
KEGG Report	rno:361849	UniProtKB/TrEMBL
NCBI Gene	361849	ENTREZGENE
PANTHER	CELL DIVISION CYCLE AND APOPTOSIS REGULATOR PROTEIN 1	UniProtKB/TrEMBL
	PTHR14304	UniProtKB/TrEMBL
Pfam	BURAN	UniProtKB/TrEMBL
	DBC1	UniProtKB/TrEMBL
	LAIKA	UniProtKB/TrEMBL
	S1-like	UniProtKB/TrEMBL
	SAP	UniProtKB/TrEMBL
PhenoGen	Ccar1	PhenoGen
PROSITE	SAP	UniProtKB/TrEMBL
RatGTEx	ENSRNOG00000000397	RatGTEx
SMART	DBC1	UniProtKB/TrEMBL
	SAP	UniProtKB/TrEMBL
Superfamily-SCOP	SSF47473	UniProtKB/TrEMBL
	SSF68906	UniProtKB/TrEMBL
UniProt	A0A8I6A183	ENTREZGENE, UniProtKB/TrEMBL
	A6K465	ENTREZGENE, UniProtKB/TrEMBL
	D4A2P1	ENTREZGENE, UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2021-03-09	Ccar1	cell division cycle and apoptosis regulator 1	LOC100911233	cell division cycle and apoptosis regulator protein 1-like	Data merged from RGD:6494440	737654	PROVISIONAL
2012-07-05	LOC100911233	cell division cycle and apoptosis regulator protein 1-like			Symbol and Name status set to provisional	70820	PROVISIONAL
2008-02-28	Ccar1	cell division cycle and apoptosis regulator 1	RGD1560358_predicted	similar to cell division cycle and apoptosis regulator 1 (predicted)	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2006-03-07	RGD1560358_predicted	similar to cell division cycle and apoptosis regulator 1 (predicted)	LOC361849	similar to cell division cycle and apoptosis regulator 1	Symbol and Name status set to approved	1299863	APPROVED
2006-02-09	LOC361849	similar to cell division cycle and apoptosis regulator 1			Symbol and Name status set to provisional	70820	PROVISIONAL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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