Dnajc19 (DnaJ heat shock protein family (Hsp40) member C19)

	Submit Data \| Help \| Video Tutorials \| News \| Publications \| Download \| REST API \| Citing RGD \| Contact
	Search RGD Grant Resources Citing RGD About Us Contact Us Genes QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) (beta) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer) Overgo Probe Designer Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease COVID-19 Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease Find Models new Genetic Models Autism Models PhenoMiner (Quantitative Phenotypes) Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes GERRC (Gene Editing Rat Resource Center) Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive Pathways Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Poster Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
	Advanced Search (OLGA)

Gene: Dnajc19 (DnaJ heat shock protein family (Hsp40) member C19) Rattus norvegicus

Analyze

Symbol:

Dnajc19

Name:

DnaJ heat shock protein family (Hsp40) member C19

RGD ID:

1560220

Description:

Predicted to enable ATPase activator activity. Predicted to be involved in several processes, including protein import into mitochondrial matrix; regulation of cardiolipin metabolic process; and visual perception. Predicted to be located in matrix side of mitochondrial inner membrane. Predicted to be part of PAM complex, Tim23 associated import motor. Human ortholog(s) of this gene implicated in 3-methylglutaconic aciduria type 5. Orthologous to human DNAJC19 (DnaJ heat shock protein family (Hsp40) member C19); PARTICIPATES IN presequence pathway of mitochondrial protein import; INTERACTS WITH (+)-schisandrin B; 2,3,7,8-tetrachlorodibenzodioxine; 4,4'-sulfonyldiphenol.

Type:

protein-coding

RefSeq Status:

PROVISIONAL

Previously known as:

DnaJ (Hsp40) homolog, subfamily C, member 19; hypothetical protein LOC502525; LOC502525; mitochondrial import inner membrane translocase subunit TIM14; RGD1560220; similar to homolog of yeast TIM14 isoform c; similar to translocase of the inner mitochondrial membrane 14 isoform a; uncharacterized protein LOC502525

RGD Orthologs

Human

Mouse

Chinchilla

Bonobo

Dog

Squirrel

Pig

Green Monkey

Naked Mole-Rat

Alliance Genes

More Info

more info ...

Latest Assembly:

mRatBN7.2 - mRatBN7.2 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
mRatBN7.2	2	116,923,272 - 116,945,312 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	2	116,923,272 - 116,945,264 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	2	123,512,875 - 123,534,874 (-)	NCBI	Rnor_SHR
UTH_Rnor_SHRSP_BbbUtx_1.0	2	121,625,542 - 121,647,543 (-)	NCBI	Rnor_SHRSP
UTH_Rnor_WKY_Bbb_1.0	2	116,253,290 - 116,275,296 (-)	NCBI	Rnor_WKY
Rnor_6.0	2	120,503,093 - 120,531,782 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	2	120,504,130 - 120,531,782 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	2	140,149,956 - 140,174,575 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
Celera	2	111,962,564 - 111,984,600 (-)	NCBI		Celera
Cytogenetic Map	2	q24	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

3-methylglutaconic aciduria (ISO)

3-methylglutaconic aciduria type 3 (ISO)

3-methylglutaconic aciduria type 5 (ISO)

Currarino syndrome (ISO)

genetic disease (ISO)

syndromic microphthalmia 3 (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

(+)-dexrazoxane (ISO)

(+)-schisandrin B (EXP)

(-)-epigallocatechin 3-gallate (ISO)

(1->4)-beta-D-glucan (ISO)

1,1-dichloroethene (ISO)

1,2-dimethylhydrazine (ISO)

17alpha-ethynylestradiol (ISO)

2,2',4,4'-Tetrabromodiphenyl ether (ISO)

2,3,7,8-tetrachlorodibenzodioxine (EXP,ISO)

3,3',5,5'-tetrabromobisphenol A (ISO)

3-isobutyl-1-methyl-7H-xanthine (ISO)

4,4'-sulfonyldiphenol (EXP,ISO)

acetamide (EXP)

aflatoxin B1 (ISO)

all-trans-retinoic acid (ISO)

aristolochic acid A (ISO)

arsane (ISO)

arsenic atom (ISO)

atrazine (ISO)

bisphenol A (EXP,ISO)

bisphenol F (EXP)

carbon nanotube (ISO)

chenodeoxycholic acid (ISO)

choline (ISO)

copper(II) sulfate (ISO)

cyclosporin A (ISO)

deoxycholic acid (ISO)

dexamethasone (ISO)

dibutyl phthalate (ISO)

dicrotophos (ISO)

doxorubicin (ISO)

fenofibrate (ISO)

fenthion (ISO)

folic acid (ISO)

glycochenodeoxycholic acid (ISO)

glycocholic acid (ISO)

glycodeoxycholic acid (ISO)

gold atom (ISO)

gold(0) (ISO)

indometacin (ISO)

L-methionine (ISO)

leflunomide (ISO)

methylmercury chloride (ISO)

nefazodone (ISO)

paracetamol (ISO)

perfluorooctane-1-sulfonic acid (ISO)

phenobarbital (ISO)

phlorizin (ISO)

pirinixic acid (ISO)

potassium chromate (ISO)

propiconazole (ISO)

silver atom (ISO)

silver(0) (ISO)

silver(1+) nitrate (ISO)

sodium arsenate (ISO)

tetrachloromethane (EXP)

thalidomide (ISO)

thioacetamide (EXP)

toluene (EXP)

trichloroethene (ISO)

triptonide (ISO)

tungsten (ISO)

valproic acid (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

biological_process (ND)

genitalia development (ISO)

protein import into mitochondrial matrix (IBA)

regulation of cardiolipin metabolic process (ISO)

visual perception (ISO)

Cellular Component

inner mitochondrial membrane protein complex (ISO)

matrix side of mitochondrial inner membrane (ISO)

mitochondrial inner membrane (ISO)

mitochondrion (ISO)

PAM complex, Tim23 associated import motor (IBA)

protein-containing complex (ISO)

Molecular Function

ATPase activator activity (IBA)

protein binding (ISO)

Molecular Pathway Annotations Click to see Annotation Detail View

presequence pathway of mitochondrial protein import (ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2.	OMIM Disease Annotation Pipeline	OMIM Disease Annotation Pipeline
3.	ClinVar Automated Import and Annotation Pipeline	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
4.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions
5.	Comprehensive gene review and curation	RGD comprehensive gene curation
6.	Unlocking the presequence import pathway.	Schulz C, etal., Trends Cell Biol. 2015 May;25(5):265-75. doi: 10.1016/j.tcb.2014.12.001. Epub 2014 Dec 23.

Additional References at PubMed

PMID:12592411	PMID:16055927	PMID:18614015	PMID:19564938	PMID:20053669

Genomics

Comparative Map Data

Dnajc19
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
mRatBN7.2	2	116,923,272 - 116,945,312 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	2	116,923,272 - 116,945,264 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	2	123,512,875 - 123,534,874 (-)	NCBI	Rnor_SHR
UTH_Rnor_SHRSP_BbbUtx_1.0	2	121,625,542 - 121,647,543 (-)	NCBI	Rnor_SHRSP
UTH_Rnor_WKY_Bbb_1.0	2	116,253,290 - 116,275,296 (-)	NCBI	Rnor_WKY
Rnor_6.0	2	120,503,093 - 120,531,782 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	2	120,504,130 - 120,531,782 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	2	140,149,956 - 140,174,575 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
Celera	2	111,962,564 - 111,984,600 (-)	NCBI		Celera
Cytogenetic Map	2	q24	NCBI

DNAJC19
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	3	180,983,709 - 180,989,838 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p13 Ensembl	3	180,983,697 - 180,989,774 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	3	180,701,497 - 180,707,626 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	3	182,184,197 - 182,190,224 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Celera	3	179,133,934 - 179,140,000 (-)	NCBI		Celera
Cytogenetic Map	3	q26.33	NCBI
HuRef	3	178,105,493 - 178,111,557 (-)	NCBI		HuRef
CHM1_1	3	180,664,781 - 180,670,846 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	3	183,785,491 - 183,791,620 (-)	NCBI		T2T-CHM13v2.0

Dnajc19
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	3	34,111,429 - 34,135,503 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	3	34,110,169 - 34,135,470 (-)	Ensembl		GRCm39 Ensembl
GRCm38	3	34,057,280 - 34,081,354 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	3	34,056,020 - 34,081,321 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	3	33,956,680 - 33,980,248 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	3	34,249,307 - 34,272,875 (-)	NCBI		MGSCv36	mm8
Celera	3	33,953,924 - 33,977,453 (-)	NCBI		Celera
Cytogenetic Map	3	A3	NCBI

Dnajc19
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955420	9,953,045 - 9,978,789 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955420	9,974,466 - 9,978,789 (-)	NCBI	ChiLan1.0	ChiLan1.0

DNAJC19
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1	3	178,861,138 - 178,866,350 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	3	178,019,161 - 178,025,272 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	3	186,191,128 - 186,197,156 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	3	186,191,128 - 186,195,666 (-)	Ensembl	panpan1.1		panPan2

DNAJC19
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	34	14,199,507 - 14,204,736 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	34	14,199,675 - 14,204,687 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	34	18,281,677 - 18,286,739 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	34	14,101,051 - 14,106,123 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	34	14,098,572 - 14,106,041 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	34	14,146,876 - 14,151,940 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	34	14,129,181 - 14,134,245 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	34	14,373,244 - 14,378,316 (-)	NCBI		UU_Cfam_GSD_1.0

Dnajc19
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405602	110,872,579 - 110,877,731 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936566	2,343,013 - 2,368,213 (+)	Ensembl	SpeTri2.0
SpeTri2.0	NW_004936566	2,342,995 - 2,348,345 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

DNAJC19
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	13	118,902,666 - 118,913,270 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	13	118,907,299 - 118,913,270 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	13	128,168,301 - 128,255,013 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

DNAJC19
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	15	8,408,615 - 8,426,838 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	15	8,408,400 - 8,429,990 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666063	17,240,292 - 17,259,188 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Dnajc19
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624730	58,730,413 - 58,755,688 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624730	58,746,824 - 58,755,544 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in Dnajc19
50 total Variants

miRNA Target Status

Predicted Target Of

	Summary Value
Count of predictions:	624
Count of miRNA genes:	275
Interacting mature miRNAs:	336
Transcripts:	ENSRNOT00000071944
Prediction methods:	Microtar, Miranda, Rnahybrid
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (mRatBN7.2)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
1302794	Stl27	Serum triglyceride level QTL 27	4.4	0.0001	blood triglyceride amount (VT:0002644)	plasma triglyceride level (CMO:0000548)	2	25413423	143657569	Rat
1358894	Kidm24	Kidney mass QTL 24	4.03		kidney mass (VT:0002707)	both kidneys wet weight to body weight ratio (CMO:0000340)	2	25413423	157142209	Rat
1358899	Kidm23	Kidney mass QTL 23	3.88		kidney mass (VT:0002707)	both kidneys wet weight to body weight ratio (CMO:0000340)	2	25413423	157142209	Rat
1358901	Cm38	Cardiac mass QTL 38	2		heart mass (VT:0007028)	heart weight to body weight ratio (CMO:0000074)	2	25413423	157142209	Rat
1358904	Cm39	Cardiac mass QTL 39	2.26		heart mass (VT:0007028)	heart weight to body weight ratio (CMO:0000074)	2	25413423	157142209	Rat
1358910	Kidm27	Kidney mass QTL 27	5.77		kidney mass (VT:0002707)	both kidneys wet weight to body weight ratio (CMO:0000340)	2	25413423	157142209	Rat
1358911	Kidm28	Kidney mass QTL 28	5.42		kidney mass (VT:0002707)	both kidneys wet weight to body weight ratio (CMO:0000340)	2	25413423	157142209	Rat
1358913	Cm41	Cardiac mass QTL 41	2.73		heart mass (VT:0007028)	heart weight to body weight ratio (CMO:0000074)	2	25413423	203928301	Rat
1358917	Cm42	Cardiac mass QTL 42	2.82		heart mass (VT:0007028)	heart weight to body weight ratio (CMO:0000074)	2	25413423	203928301	Rat
1358887	Bw50	Body weight QTL 50	2.39		body mass (VT:0001259)	body weight (CMO:0000012)	2	25413652	157142078	Rat
1358908	Bw49	Body weight QTL 49	3.36		body mass (VT:0001259)	body weight (CMO:0000012)	2	25413652	157142078	Rat
1354603	Bp243	Blood pressure QTL 243	3.9		arterial blood pressure trait (VT:2000000)	diastolic blood pressure (CMO:0000005)	2	26917817	127469484	Rat
2290453	Scl55	Serum cholesterol level QTL 55	2.83		blood cholesterol amount (VT:0000180)	plasma total cholesterol level (CMO:0000585)	2	26917817	136917119	Rat
2293835	Kiddil5	Kidney dilation QTL 5	3.8		kidney pelvis morphology trait (VT:0004194)	hydronephrosis severity score (CMO:0001208)	2	42804607	157142209	Rat
2293843	Kiddil6	Kidney dilation QTL 6	3.1		kidney pelvis morphology trait (VT:0004194)	hydronephrosis severity score (CMO:0001208)	2	42804607	182042367	Rat
1298074	Bp164	Blood pressure QTL 164		0.003	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	2	42804607	202447032	Rat
1298085	Bp165	Blood pressure QTL 165		0.0006	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	2	42804607	202447032	Rat
61467	Bp14	Blood pressure QTL 14	2.2		arterial blood pressure trait (VT:2000000)	diastolic blood pressure (CMO:0000005)	2	43154682	202446871	Rat
61467	Bp14	Blood pressure QTL 14	2.2		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	2	43154682	202446871	Rat
2293671	Bss44	Bone structure and strength QTL 44	10.97	0.0001	lumbar vertebra morphology trait (VT:0010494)	lumbar vertebra cortical cross-sectional area (CMO:0001690)	2	43162366	148478373	Rat
1354601	Slep1	Serum leptin concentration QTL 1	5.39		blood leptin amount (VT:0005667)	serum leptin level (CMO:0000780)	2	43171017	184114403	Rat
631266	Bp132	Blood pressure QTL 132		0.0005	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	2	46123260	202447032	Rat
1331760	Bp206	Blood pressure QTL 206	3.62454		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	2	56043031	202447032	Rat
1558648	Smcn1	Smooth muscle cell number QTL 1		0.039	blood vessel smooth muscle cell quantity (VT:0010525)	aorta smooth muscle cell count per unit vessel length (CMO:0001646)	2	59134147	127460910	Rat
61438	Cia7	Collagen induced arthritis QTL 7	4.6	0.0001	joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	2	59324377	141596857	Rat
1298080	Bp163	Blood pressure QTL 163		0.02	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	2	66118275	202447032	Rat
1354648	Bp239	Blood pressure QTL 239		0.001	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	2	66118463	226797303	Rat
1558653	Prcr1	Prostate cancer resistance QTL 1	5		prostate integrity trait (VT:0010571)	area of ventral prostate occupied by tumorous lesions to total ventral prostate area ratio (CMO:0000899)	2	72532993	157142209	Rat
1354605	Rf48	Renal function QTL 48	2.9		blood creatinine amount (VT:0005328)	plasma creatinine level (CMO:0000537)	2	74786664	206665859	Rat
631198	Cm22	Cardiac mass QTL 22	4.3	0.0008	heart left ventricle mass (VT:0007031)	heart left ventricle weight to body weight ratio (CMO:0000530)	2	76539322	150540526	Rat
61374	Edpm2	Estrogen-dependent pituitary mass QTL 2	4.42	0.86	pituitary gland mass (VT:0010496)	pituitary gland wet weight (CMO:0000853)	2	76539322	202447032	Rat
2299162	Iddm32	Insulin dependent diabetes mellitus QTL 32	2.36		blood glucose amount (VT:0000188)	age at onset/diagnosis of type 1 diabetes mellitus (CMO:0001140)	2	78665616	143657569	Rat
1581569	Uae32	Urinary albumin excretion QTL 32		0.0001	urine protein amount (VT:0005160)	urine albumin excretion rate (CMO:0000757)	2	78665619	219826953	Rat
724534	Uae6	Urinary albumin excretion QTL 6	10		urine albumin amount (VT:0002871)	urine albumin level (CMO:0000130)	2	78665619	249053267	Rat
61392	Bp6	Blood pressure QTL 6	7		arterial blood pressure trait (VT:2000000)	pulse pressure (CMO:0000292)	2	80270434	125270434	Rat
1598865	Bp296	Blood pressure QTL 296	2.1		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	2	81018907	126018907	Rat
8662832	Vetf7	Vascular elastic tissue fragility QTL 7	3.5		aorta elastin amount (VT:0003905)	aorta wall extracellular elastin dry weight to aorta wall dry weight ratio (CMO:0002002)	2	81689826	221035911	Rat
1354622	Kidm16	Kidney mass QTL 16	3		kidney mass (VT:0002707)	left kidney wet weight (CMO:0000083)	2	81754530	222436696	Rat
1354649	Kidm17	Kidney mass QTL 17	2.9		kidney mass (VT:0002707)	calculated kidney weight (CMO:0000160)	2	81754530	227146641	Rat
1578772	Stresp14	Stress response QTL 14	5	0.001	blood renin amount (VT:0003349)	plasma renin activity level (CMO:0000116)	2	82345893	130923501	Rat
7207808	Bmd89	Bone mineral density QTL 89	4.1		femur strength trait (VT:0010010)	femoral neck ultimate force (CMO:0001703)	2	88862519	133862519	Rat
2300165	Bmd49	Bone mineral density QTL 49	4.8	0.0001	lumbar vertebra mineral mass (VT:0010511)	bone mineral density (CMO:0001226)	2	88862519	133862519	Rat
2300170	Bmd45	Bone mineral density QTL 45	12.1	0.0001	lumbar vertebra mineral mass (VT:0010511)	volumetric bone mineral density (CMO:0001553)	2	88862519	133862519	Rat
2300185	Bmd46	Bone mineral density QTL 46	8.4	0.0001	femur mineral mass (VT:0010011)	volumetric bone mineral density (CMO:0001553)	2	88862519	133862519	Rat
1598862	Glom9	Glomerulus QTL 9	3.5		kidney glomerulus morphology trait (VT:0005325)	index of glomerular damage (CMO:0001135)	2	92337601	137337601	Rat
1598863	Cm65	Cardiac mass QTL 65	2.3		heart mass (VT:0007028)	heart weight to body weight ratio (CMO:0000074)	2	92337601	137337601	Rat
631566	Bp90	Blood pressure QTL 90		0.0001	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	2	102803808	147803808	Rat
8662836	Vetf8	Vascular elastic tissue fragility QTL 8	0.66		thoracic aorta molecular composition trait (VT:0010568)	aorta wall extracellular elastin dry weight to aorta wall extracellular collagen weight ratio (CMO:0002003)	2	104559726	149559726	Rat
1581552	Pur12	Proteinuria QTL 12	5.19	0.0009	urine total protein amount (VT:0000032)	urine protein excretion rate (CMO:0000759)	2	112103657	148076632	Rat
631507	Bp105	Blood pressure QTL 105		0.001	arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	2	112456140	212696837	Rat
634308	Sach6	Saccharin preference QTL 6	4.9		taste sensitivity trait (VT:0001986)	saccharin intake volume to total fluid intake volume ratio (CMO:0001601)	2	112456140	212696837	Rat
1354594	Despr10	Despair related QTL 10		0.00000249	locomotor behavior trait (VT:0001392)	amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)	2	114654253	159654253	Rat
1359035	Bp276	Blood pressure QTL 276			arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	2	114837527	143657569	Rat
1359035	Bp276	Blood pressure QTL 276			arterial blood pressure trait (VT:2000000)	diastolic blood pressure (CMO:0000005)	2	114837527	143657569	Rat
1359030	Bp277	Blood pressure QTL 277			arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	2	114837527	185876470	Rat
1359030	Bp277	Blood pressure QTL 277			arterial blood pressure trait (VT:2000000)	diastolic blood pressure (CMO:0000005)	2	114837527	185876470	Rat
1578648	Bss11	Bone structure and strength QTL 11	4.7		femur morphology trait (VT:0000559)	femoral neck cortical cross-sectional area (CMO:0001702)	2	114837527	211674221	Rat
1554319	Bmd2	Bone mineral density QTL 2	13.4	0.0001	lumbar vertebra area (VT:0010570)	lumbar vertebra cross-sectional area (CMO:0001689)	2	114837675	212549332	Rat

Markers in Region

RH130227

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	2	116,943,105 - 116,944,207 (-)	MAPPER	mRatBN7.2
mRatBN7.2	2	183,874,347 - 183,874,544 (+)	MAPPER	mRatBN7.2
Rnor_6.0	2	198,453,117 - 198,453,313	NCBI	Rnor6.0
Rnor_6.0	2	120,505,187 - 120,506,288	NCBI	Rnor6.0
Rnor_5.0	2	217,938,876 - 217,939,072	UniSTS	Rnor5.0
Rnor_5.0	2	140,151,029 - 140,152,130	UniSTS	Rnor5.0
RGSC_v3.4	2	191,118,700 - 191,118,896	UniSTS	RGSC3.4
Celera	2	176,401,946 - 176,402,142	UniSTS
Celera	2	111,982,442 - 111,983,543	UniSTS
RH 3.4 Map	2	683.4	UniSTS
Cytogenetic Map	2	q25	UniSTS

RH132222

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	2	116,932,491 - 116,932,685 (-)	MAPPER	mRatBN7.2
Rnor_6.0	2	120,516,718 - 120,516,911	NCBI	Rnor6.0
Rnor_5.0	2	140,162,560 - 140,162,753	UniSTS	Rnor5.0
RGSC_v3.4	2	120,379,472 - 120,379,665	UniSTS	RGSC3.4
Celera	2	111,971,786 - 111,971,979	UniSTS
RH 3.4 Map	2	683.6	UniSTS
Cytogenetic Map	2	q25	UniSTS

X90875

Rat Assembly	Chr	Position (strand)	Source	JBrowse
Rnor_5.0	2	140,158,874 - 140,159,032	UniSTS	Rnor5.0
Rnor_5.0	2	140,165,423 - 140,165,581	UniSTS	Rnor5.0
Celera	2	111,975,507 - 111,975,665	UniSTS
Cytogenetic Map	2	q25	UniSTS

RH139070

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	2	116,924,570 - 116,924,704 (-)	MAPPER	mRatBN7.2
Rnor_6.0	2	120,530,350 - 120,530,483	NCBI	Rnor6.0
Rnor_5.0	2	140,173,143 - 140,173,276	UniSTS	Rnor5.0
Celera	2	111,963,863 - 111,963,996	UniSTS
RH 3.4 Map	2	684.9	UniSTS
Cytogenetic Map	2	q25	UniSTS

BI274570

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	2	116,935,372 - 116,936,240 (-)	MAPPER	mRatBN7.2
Rnor_6.0	2	120,519,947 - 120,520,151	NCBI	Rnor6.0
Rnor_6.0	2	120,513,163 - 120,514,030	NCBI	Rnor6.0
Rnor_5.0	2	140,159,005 - 140,159,872	UniSTS	Rnor5.0
Rnor_5.0	2	140,165,554 - 140,165,758	UniSTS	Rnor5.0
Celera	2	111,974,667 - 111,975,534	UniSTS
RH 3.4 Map	1	16.7	UniSTS
Cytogenetic Map	2	q25	UniSTS

BI281166

Rat Assembly	Chr	Position (strand)	Source	JBrowse
Rnor_6.0	2	120,520,007 - 120,520,204	NCBI	Rnor6.0
Rnor_5.0	2	140,165,614 - 140,165,811	UniSTS	Rnor5.0
RH 3.4 Map	1	16.7	UniSTS
Cytogenetic Map	2	q25	UniSTS

G34972

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	2	183,874,210 - 183,874,356 (+)	MAPPER	mRatBN7.2
Rnor_6.0	2	198,452,980 - 198,453,125	NCBI	Rnor6.0
Rnor_5.0	2	217,938,739 - 217,938,884	UniSTS	Rnor5.0
RGSC_v3.4	2	191,118,563 - 191,118,708	UniSTS	RGSC3.4
Celera	2	176,401,809 - 176,401,954	UniSTS
Cytogenetic Map	2	q25	UniSTS

RH66895

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	2	183,874,210 - 183,874,356 (+)	MAPPER	mRatBN7.2
Rnor_6.0	2	198,452,980 - 198,453,125	NCBI	Rnor6.0
Rnor_5.0	2	217,938,739 - 217,938,884	UniSTS	Rnor5.0
RGSC_v3.4	2	191,118,563 - 191,118,708	UniSTS	RGSC3.4
Celera	2	176,401,809 - 176,401,954	UniSTS
Cytogenetic Map	2	q25	UniSTS

UniSTS:479111

Rat Assembly	Chr	Position (strand)	Source	JBrowse
Rnor_6.0	2	120,520,193 - 120,520,822	NCBI	Rnor6.0
Rnor_5.0	2	140,165,800 - 140,166,429	UniSTS	Rnor5.0
Cytogenetic Map	2	q25	UniSTS

Expression

RNA-SEQ Expression

High: > 1000 TPM value Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM Below Cutoff: < 0.5 TPM

	alimentary part of gastrointestinal system	circulatory system	endocrine system	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	appendage
High
Medium	3	41	56	41	19	41	8	10	72	35	34	11	8
Low		2	1					1	2		7
Below cutoff

View RNA-SEQ Expression Data

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001134640	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006232259	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017591049	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	CH473961	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ212146	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JACYVU010000067	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Reference Sequences

RefSeq Acc Id:

ENSRNOT00000071944 ⟹ ENSRNOP00000065070

RefSeq Status:

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	2	116,923,272 - 116,945,264 (-)	Ensembl
Rnor_6.0 Ensembl	2	120,504,130 - 120,531,782 (+)	Ensembl

RefSeq Acc Id:

ENSRNOT00000104976 ⟹ ENSRNOP00000089472

RefSeq Status:

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	2	116,941,140 - 116,944,961 (-)	Ensembl

RefSeq Acc Id:

ENSRNOT00000108781 ⟹ ENSRNOP00000079072

RefSeq Status:

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	2	116,923,272 - 116,945,109 (-)	Ensembl

RefSeq Acc Id:

ENSRNOT00000109197 ⟹ ENSRNOP00000086942

RefSeq Status:

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	2	116,941,140 - 116,945,109 (-)	Ensembl

RefSeq Acc Id:

ENSRNOT00000118294 ⟹ ENSRNOP00000080178

RefSeq Status:

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	2	116,942,435 - 116,945,264 (-)	Ensembl

RefSeq Acc Id:

ENSRNOT00000118548 ⟹ ENSRNOP00000083629

RefSeq Status:

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	2	116,941,140 - 116,945,164 (-)	Ensembl

RefSeq Acc Id:

ENSRNOT00000118761 ⟹ ENSRNOP00000083714

RefSeq Status:

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	2	116,923,272 - 116,944,268 (-)	Ensembl

RefSeq Acc Id:

NM_001134640 ⟹ NP_001128112

RefSeq Status:

PROVISIONAL

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	2	116,923,272 - 116,945,264 (-)	NCBI
Rnor_6.0	2	120,504,130 - 120,531,782 (+)	NCBI
Rnor_5.0	2	140,149,956 - 140,174,575 (+)	NCBI
Celera	2	111,962,564 - 111,984,600 (-)	RGD

Sequence:

show sequence

GCGCCCCTGCCGTGTTGCGCGGCGCTGTGGAAGTGGCGGCAGTGCTGGCTCGGCCCTATCGTTC
TACTCAAGCGTACTGTGGCGGTGGGCTCGCGCTGGGATGAGCCCGCGGTGCCGAGCCGCGAAGT
GGAGTCATGGCCAGTACAGTGGTAGCAGTCGGATTGACCATTGCTGCTGCAGGATTTGCAGGCC
GTTATGTTTTACAAGCCATGAAGCATGTGGAGCCTCAAGTAAAACAAGTTTTTCAGAGTCTACC
AAAATCTGCCTTCAGTGGTGGGTACTATAGAGGTGGGTTTGAACCCAAAATGACAAAACGGGAA
GCAGCATTAATACTAGGTGTAAGCCCTACTGCCAATAAAGGGAAGATCAGGGATGCTCATCGAC
GGATTATGCTCTTAAACCACCCAGACAAGGGCCCTCTGGTGGAAGAAGGTCTGAAACCCATACC
AATCTGTCGCAGCTGTTCATCGATCTGCAGGCGTTCCATTCTTAGTTGTTCCACTTCCTACAAT
CAAAACAAAGACTGTTTTATACACTGTGTGTGTCTATGTGCATTCATGAATGCACCTATGGGTA
CACCTGTCAGACACTGTGAGACCCACTTGACCCATCTTCCCCAGCCCACATCCTCTACAGGTTT
GACATGTTTTGGACTAGAGCTAGAACTGTAGAGTATACACCAAAGAAACAAACTGTGATCTTTT
GAAATCATCTCATAAAGCAGAACTGTATTCACGAGGTCATTTGGGGGTCAACTCAAGAAACACT
GAAAGCTTTTTGCTATAAGCAAACAGTATAATTCTTTCAAGTAACTGTTCTATTGCAGTAACTT
ATCTGTTATTGTTATCTAATATTACCAAATACTGTCCTTTTTTTGCTTTTGAGTGCATGTGTAT
ACATGCGCATATAAGTTTATATATACCATCATGCACCTGTGGAGATCTAACTGTAACTTGAAGT
AGTTGATTCTCTCCTACAATGTGAGTTTTATGTATGTATGTAAGCTTAGCTGCAAAAACTTTAA
TGCACGGAGTCAGCCCACTGGCCAAATACTGTCTCTTTAAAAAGGGAGTTAAATATTCTATTAA
AGGTATTATTAACAAGCTATTTCACGAGCAACATTTTCATTTATGACTGAGATAGACAAGCTGA
TCTGATCATTTAGAAACTGAGGTCCTGCAACAGTGAAGGTATCCAATCTAAAGAGTTATCTGCT
GGGACTACAGAAGATAAAAAAGCATTTGCTTACAAGGCCAGGATTGATAAAATTCCAAGAAATT
GAATGGTGTTATCAAATGTGCTTTCAAATTGCTTGTACAAGAATAATATCAGAATACAAGGAAA
ATATACTATGAATAGAGAGCAGGTTAGGATTATTACTGGAACTATGAACAACAAAAAAAGAAGA
GAAAAACAAAAAACTGACGCTTACTGGTAGTCACTTTTTTCTATAATCCTTGTGTATTATATTT
CAACCGAAATTAACAAATGGGGGCTGAGGATAGAACACAGAAACTGATGCCTGTTTTGTTTACC
GTGCCCTTGGCTCTGGTTTGCATCTTCAGCAACTCACCCTTCCCTCAAAATTGATGGAATGCAG
TGTACTGGGGCAAGGACGCTAGCTCACATAATACCAGGGTTATCAAAGAAACCCAATTTCACCT
GTGTAGATGGCTAAAACTCAAAAACAGAAACAAAATGGCCCTAGTAGAGCACATAATTATTGTA
AACAATGAACTCTTCAAACGTGAAGAGTTTGAAGTCTTCAAACGTGAAGTCTTTGGGGGGGGGG
GTAAAGACTCTACCACCCCTTACAAAAGTGTTAAGGGCAAAGAACATGTTACTCTCAAGTTAAC
AAAAACAGGGCAAAACTTAATTAAAATATTTAATTACCCAAAAACATTACCATAACAAACAAGA
ACGTTCAACCTGCAGACACCTTGTTTATACTAGGTATACAACATTGACAGAGAAAATGCAGCAG
AATGATACATGACAAAGTGAGCTGTGCCCATACCTTTAAGTAAGCAATGTGATACTCTAGAAGA
ACTTGCACATTTCCAATACTTTCTTTAGTGCCAACAAATACAAATGGAACCATTCCCTGTAAGA
AAACATAAGTTCCTCAATTTTTTTAGAGATTTTTCAATGTCTTACTTGTACTAAAATTTACATT
TCAGTTTGCTAAAAAAAAAAAAAAAAAAGTATCAGTTTGTGCTAGTTTTCTGGATTTTAATCAA
TGTAATGTCCCAAGAATACAAACCACTTTTTAAGCAAAATACTCAAAATACTCTTTCAGACTAG
AAAAATTATCATAGTAGGCACAGCTAGAAAATAATGAAATAATGAAAAGAAAG

hide sequence

RefSeq Acc Id:

XM_006232259 ⟹ XP_006232321

RefSeq Status:

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	2	116,941,099 - 116,945,312 (-)	NCBI
Rnor_6.0	2	120,504,119 - 120,508,303 (+)	NCBI
Rnor_5.0	2	140,149,956 - 140,174,575 (+)	NCBI

Sequence:

show sequence

CGCACTTTACGGCGCCCCTGCCGTGTTGCGCGGCGCTGTGGAAGTGGCGGCAGTGCTGGCTCGG
CCCTATCGTTCTACTCAAGCGTACTGTGGCGGTGGGCTCGCGCTGGGATGAGCCCGCGGTGCCG
AGCCGCGAAGTGGAGTCATGGCCAGTACAGTGGTAGCAGTCGGATTGACCATTGCTGCTGCAGG
ATTTGCAGGCCGTTATGTTTTACAAGCCATGAAGCATGTGGAGCCTCAAGTAAAACAAGTTTTT
CAGAGTCTACCAAAATCTGCCTTCAGTGGTGGGTACTATAGAGGTGGGTTTGAACCCAAAATGA
CAAAACGGGAAGCAGCATTAATACTAGGTGTAAGCCCTACTGCCAATAAAGGGAAGATCAGGGA
TGCTCATCGACGGATTATGCTCTTAAACCACCCAGACAAGGGAGGATCTCCTTATATAGCAGCC
AAAATCAATGAAGCTAAAGACTTACTAGAAGGACAAGCTAAAAAATAAAGTAATCTGATGAATT
TTAAGTCCATTAGTCTACTTATGAGCATGTTTTTAAATAAAATGCCTCAGAGCTGTAACTCATG
ATGTAACTCATGAAAATTTCTTGGCAAAAGCTAAA

hide sequence

Protein Sequences


Protein RefSeqs	NP_001128112	(Get FASTA)	NCBI Sequence Viewer
	XP_006232321	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	EDM01234	(Get FASTA)	NCBI Sequence Viewer
	EDM01235	(Get FASTA)	NCBI Sequence Viewer
	EDM01236	(Get FASTA)	NCBI Sequence Viewer

Reference Sequences

RefSeq Acc Id:	NP_001128112 ⟸ NM_001134640
- UniProtKB:	M0R6L8 (UniProtKB/TrEMBL)
- Sequence:	show sequence MASTVVAVGLTIAAAGFAGRYVLQAMKHVEPQVKQVFQSLPKSAFSGGYYRGGFEPKMTKREAA LILGVSPTANKGKIRDAHRRIMLLNHPDKGPLVEEGLKPIPICRSCSSICRRSILSCSTSYNQN KDCFIHCVCLCAFMNAPMGTPVRHCETHLTHLPQPTSSTGLTCFGLELEL hide sequence

RefSeq Acc Id:	XP_006232321 ⟸ XM_006232259
- Peptide Label:	isoform X1
- Sequence:	show sequence MASTVVAVGLTIAAAGFAGRYVLQAMKHVEPQVKQVFQSLPKSAFSGGYYRGGFEPKMTKREAA LILGVSPTANKGKIRDAHRRIMLLNHPDKGGSPYIAAKINEAKDLLEGQAKK hide sequence

RefSeq Acc Id:

ENSRNOP00000065070 ⟸ ENSRNOT00000071944

RefSeq Acc Id:

ENSRNOP00000083714 ⟸ ENSRNOT00000118761

RefSeq Acc Id:

ENSRNOP00000083629 ⟸ ENSRNOT00000118548

RefSeq Acc Id:

ENSRNOP00000079072 ⟸ ENSRNOT00000108781

RefSeq Acc Id:

ENSRNOP00000086942 ⟸ ENSRNOT00000109197

RefSeq Acc Id:

ENSRNOP00000080178 ⟸ ENSRNOT00000118294

RefSeq Acc Id:

ENSRNOP00000089472 ⟸ ENSRNOT00000104976

Protein Domains

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-M0R6L8-F1-model_v2	AlphaFold	M0R6L8	1-178	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Promoters

RGD ID:

13691286

Promoter ID:

EPDNEW_R1811

Type:

initiation region

Name:

Dnajc19_1

Description:

DnaJ heat shock protein family member C19

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0	2	120,504,141 - 120,504,201	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1560220	AgrOrtholog
BioCyc Gene	G2FUF-53395	BioCyc
Ensembl Genes	ENSRNOG00000049819	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Protein	ENSRNOP00000065070	ENTREZGENE
	ENSRNOP00000065070.1	UniProtKB/TrEMBL
	ENSRNOP00000079072.1	UniProtKB/TrEMBL
	ENSRNOP00000080178.1	UniProtKB/TrEMBL
	ENSRNOP00000083629.1	UniProtKB/TrEMBL
	ENSRNOP00000083714.1	UniProtKB/TrEMBL
	ENSRNOP00000086942	ENTREZGENE
	ENSRNOP00000086942.1	UniProtKB/TrEMBL
	ENSRNOP00000089472.1	UniProtKB/TrEMBL
Ensembl Transcript	ENSRNOT00000071944	ENTREZGENE
	ENSRNOT00000071944.2	UniProtKB/TrEMBL
	ENSRNOT00000104976.1	UniProtKB/TrEMBL
	ENSRNOT00000108781.1	UniProtKB/TrEMBL
	ENSRNOT00000109197	ENTREZGENE
	ENSRNOT00000109197.1	UniProtKB/TrEMBL
	ENSRNOT00000118294.1	UniProtKB/TrEMBL
	ENSRNOT00000118548.1	UniProtKB/TrEMBL
	ENSRNOT00000118761.1	UniProtKB/TrEMBL
Gene3D-CATH	1.10.287.110	UniProtKB/TrEMBL
InterPro	DnaJ_dom_sf	UniProtKB/TrEMBL
	DnaJ_domain	UniProtKB/TrEMBL
KEGG Report	rno:502525	UniProtKB/TrEMBL
NCBI Gene	502525	ENTREZGENE
PANTHER	MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM14	UniProtKB/TrEMBL
	UNCHARACTERIZED	UniProtKB/TrEMBL
Pfam	DnaJ	UniProtKB/TrEMBL
PhenoGen	Dnajc19	PhenoGen
PROSITE	DNAJ_2	UniProtKB/TrEMBL
SMART	DnaJ	UniProtKB/TrEMBL
Superfamily-SCOP	DnaJ_N	UniProtKB/TrEMBL
UniProt	A0A8I5ZMN9_RAT	UniProtKB/TrEMBL
	A0A8I5ZP86_RAT	UniProtKB/TrEMBL
	A0A8I5ZWI8_RAT	UniProtKB/TrEMBL
	A0A8I6A0C7_RAT	UniProtKB/TrEMBL
	A0A8I6A7G6_RAT	UniProtKB/TrEMBL
	A0A8I6ABU0_RAT	UniProtKB/TrEMBL
	M0R6L8	ENTREZGENE, UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2015-11-25	Dnajc19	DnaJ heat shock protein family (Hsp40) member C19	Dnajc19	DnaJ (Hsp40) homolog, subfamily C, member 19	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2013-11-22	Dnajc19	DnaJ (Hsp40) homolog, subfamily C, member 19	RGD1560220	similar to homolog of yeast TIM14 isoform c	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2013-05-24	RGD1560220	similar to homolog of yeast TIM14 isoform c	LOC683663	similar to translocase of the inner mitochondrial membrane 14 isoform a	Data Merged	1643240	APPROVED
2008-04-30	RGD1560220	similar to homolog of yeast TIM14 isoform c	RGD1560220_predicted	similar to homolog of yeast TIM14 isoform c (predicted)	'predicted' is removed	2292626	APPROVED
2006-11-19	LOC683663	similar to translocase of the inner mitochondrial membrane 14 isoform a			Symbol and Name status set to provisional	70820	PROVISIONAL
2006-03-07	RGD1560220_predicted	similar to homolog of yeast TIM14 isoform c (predicted)	LOC502525	similar to homolog of yeast TIM14 isoform c	Symbol and Name status set to approved	1299863	APPROVED
2006-02-09	LOC502525	similar to homolog of yeast TIM14 isoform c			Symbol and Name status set to provisional	70820	PROVISIONAL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Imported Disease Annotations - ClinVar

Imported Disease Annotations - OMIM

RGD Manual Annotations

Send us a Message

Imported Disease Annotations - ClinVar

Imported Disease Annotations - OMIM

RGD Manual Annotations