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Gene: Usp9x (ubiquitin specific peptidase 9, X-linked) Rattus norvegicus

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Symbol:

Usp9x

Name:

ubiquitin specific peptidase 9, X-linked

RGD ID:

1560056

Description:

Predicted to enable several functions, including co-SMAD binding activity; deubiquitinase activity; and ubiquitin protein ligase binding activity. Predicted to be involved in several processes, including DNA alkylation repair; protein deubiquitination; and transforming growth factor beta receptor superfamily signaling pathway. Predicted to act upstream of or within several processes, including cellular response to transforming growth factor beta stimulus; in utero embryonic development; and nervous system development. Predicted to be located in apical part of cell; cilium; and growth cone. Predicted to be active in several cellular components, including centrosome; cytosol; and postsynapse. Human ortholog(s) of this gene implicated in female-restricted syndromic X-linked intellectual disability 99 and non-syndromic X-linked intellectual disability 99. Orthologous to human USP9X (ubiquitin specific peptidase 9 X-linked); INTERACTS WITH 17alpha-ethynylestradiol; 17beta-estradiol; 2,3,7,8-tetrachlorodibenzodioxine.

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

LOC363445; probable ubiquitin carboxyl-terminal hydrolase FAF-X; RGD1560056; similar to ubiquitin specific protease 9, X-linked (fat facets-like, Drosophila); ubiquitin specific peptidase 9, X chromosome

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

mRatBN7.2 - mRatBN7.2 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	X	12,261,633 - 12,399,780 (-)	NCBI		GRCr8
mRatBN7.2	X	9,588,825 - 9,726,993 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	X	9,588,825 - 9,696,711 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	X	9,772,936 - 9,880,483 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	X	13,270,083 - 13,377,627 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	X	9,539,867 - 9,647,608 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	X	10,510,033 - 10,660,555 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	X	10,510,033 - 10,630,297 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	X	11,308,415 - 11,458,704 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	X	21,606,330 - 21,718,042 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
Celera	X	10,119,391 - 10,226,802 (-)	NCBI		Celera
Cytogenetic Map	X	q12	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

autistic disorder (ISO)

body dysmorphic disorder (ISO)

Developmental Disabilities (ISO)

Developmental Disease (ISO)

epilepsy (ISO)

female-restricted syndromic X-linked intellectual disability 99 (ISO)

genetic disease (ISO)

intellectual disability (ISO)

Neurodevelopmental Disorders (ISO)

non-syndromic X-linked intellectual disability 101 (ISO)

non-syndromic X-linked intellectual disability 99 (ISO)

ornithine carbamoyltransferase deficiency (ISO)

syndromic X-linked intellectual disability Hedera type (ISO)

syndromic X-linked intellectual disability Lubs type (ISO)

syndromic X-linked intellectual disability Najm type (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

(-)-epigallocatechin 3-gallate (ISO)

(1->4)-beta-D-glucan (ISO)

1,2-dimethylhydrazine (ISO)

17alpha-ethynylestradiol (EXP)

17beta-estradiol (EXP)

2,2',4,4'-Tetrabromodiphenyl ether (ISO)

2,3',4,4',5-Pentachlorobiphenyl (ISO)

2,3,7,8-tetrachlorodibenzodioxine (EXP,ISO)

2,3,7,8-Tetrachlorodibenzofuran (EXP)

2,4,6-tribromophenol (ISO)

2,6-dinitrotoluene (EXP)

3-methylcholanthrene (ISO)

5-fluorouracil (ISO)

aconitine (EXP)

acrylamide (EXP)

aflatoxin B1 (ISO)

all-trans-retinoic acid (ISO)

amitrole (EXP)

antirheumatic drug (ISO)

aristolochic acid A (ISO)

arsenite(3-) (ISO)

atrazine (ISO)

benzo[a]pyrene (ISO)

benzo[a]pyrene diol epoxide I (ISO)

bisphenol A (EXP,ISO)

Bisphenol A diglycidyl ether (ISO)

bisphenol F (ISO)

butanal (ISO)

cadmium dichloride (ISO)

caffeine (ISO)

CGP 52608 (ISO)

chlordecone (ISO)

chlorohydrocarbon (EXP)

chlorpyrifos (ISO)

chromium(6+) (ISO)

cocaine (ISO)

copper(II) sulfate (ISO)

dibutyl phthalate (EXP)

dioxygen (ISO)

dorsomorphin (ISO)

elemental selenium (ISO)

entinostat (ISO)

enzyme inhibitor (ISO)

fenofibrate (ISO)

fipronil (EXP)

flutamide (EXP)

folic acid (ISO)

ivermectin (ISO)

menadione (ISO)

methapyrilene (EXP)

methidathion (ISO)

methylmercury chloride (EXP,ISO)

methylparaben (ISO)

miconazole (ISO)

N,N-diethyl-m-toluamide (EXP)

N-methylformamide (ISO)

nickel dichloride (EXP)

nickel subsulfide (EXP)

nickel sulfate (ISO)

oxaliplatin (EXP)

paracetamol (EXP,ISO)

perfluorooctane-1-sulfonic acid (ISO)

permethrin (EXP)

phlorizin (ISO)

potassium chromate (ISO)

raloxifene (ISO)

resveratrol (ISO)

SB 431542 (ISO)

selenium atom (ISO)

sodium arsenate (ISO)

sodium arsenite (ISO)

succimer (ISO)

tamibarotene (ISO)

temozolomide (ISO)

tert-butyl hydroperoxide (ISO)

testosterone (ISO)

tetrachloromethane (EXP)

thapsigargin (ISO)

thioacetamide (EXP)

topotecan (EXP)

trichloroethene (EXP)

trichostatin A (ISO)

valproic acid (EXP,ISO)

vitamin E (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

axon extension (ISO)

BMP signaling pathway (ISO)

cell migration (IBA)

cellular response to transforming growth factor beta stimulus (ISO)

cerebellar cortex structural organization (ISO)

cilium assembly (ISO)

cytosolic ciliogenesis (ISO)

DNA alkylation repair (ISO)

hippocampus development (ISO)

in utero embryonic development (ISO)

monoubiquitinated protein deubiquitination (ISO)

negative regulation of proteasomal ubiquitin-dependent protein catabolic process (ISO)

neuron migration (ISO)

neuron projection extension (ISO)

positive regulation of TORC2 signaling (ISO)

post-embryonic development (ISO)

protein deubiquitination (ISO)

protein deubiquitination involved in ubiquitin-dependent protein catabolic process (ISO)

protein import into peroxisome matrix, receptor recycling (ISO)

protein K63-linked deubiquitination (ISO)

protein stabilization (ISO)

regulation of circadian rhythm (ISO)

regulation of postsynapse assembly (ISO)

regulation of protein stability (IBA)

transforming growth factor beta receptor signaling pathway (ISO)

Cellular Component

apical part of cell (ISO)

centrosome (ISO)

cilium (ISO)

cytoplasm (ISO)

cytosol (IBA,ISO)

growth cone (ISO)

nucleus (IBA)

postsynapse (ISO)

Molecular Function

co-SMAD binding (ISO)

cysteine-type deubiquitinase activity (IBA,ISO)

cysteine-type endopeptidase activity (ISO)

deubiquitinase activity (ISO)

K11-linked deubiquitinase activity (ISO)

K48-linked deubiquitinase activity (ISO)

K63-linked deubiquitinase activity (ISO)

molecular sequestering activity (ISO)

protein binding (ISO)

ubiquitin protein ligase binding (ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2.	OMIM Disease Annotation Pipeline	OMIM Disease Annotation Pipeline
3.	ClinVar Automated Import and Annotation Pipeline	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
4.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

Additional References at PubMed

PMID:10704870	PMID:14657369	PMID:15509704	PMID:17728463	PMID:18254724	PMID:18410486	PMID:19135894	PMID:19946888	PMID:20305814	PMID:21173155	PMID:22065755	PMID:22371489
PMID:22871113	PMID:23146885	PMID:23861879	PMID:24607389	PMID:25763846	PMID:25931508	PMID:25944111	PMID:29626158	PMID:38874156

Genomics

Comparative Map Data

Usp9x
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	X	12,261,633 - 12,399,780 (-)	NCBI		GRCr8
mRatBN7.2	X	9,588,825 - 9,726,993 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	X	9,588,825 - 9,696,711 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	X	9,772,936 - 9,880,483 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	X	13,270,083 - 13,377,627 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	X	9,539,867 - 9,647,608 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	X	10,510,033 - 10,660,555 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	X	10,510,033 - 10,630,297 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	X	11,308,415 - 11,458,704 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	X	21,606,330 - 21,718,042 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
Celera	X	10,119,391 - 10,226,802 (-)	NCBI		Celera
Cytogenetic Map	X	q12	NCBI

USP9X
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	X	41,085,445 - 41,236,579 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	X	41,085,445 - 41,236,579 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	X	40,944,698 - 41,095,832 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	X	40,829,832 - 40,980,776 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Celera	X	45,085,646 - 45,236,596 (+)	NCBI		Celera
Cytogenetic Map	X	p11.4	NCBI
HuRef	X	38,676,295 - 38,826,441 (+)	NCBI		HuRef
CHM1_1	X	40,977,600 - 41,128,503 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	X	40,487,470 - 40,638,605 (+)	NCBI		T2T-CHM13v2.0

Usp9x
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	X	12,937,221 - 13,039,567 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	X	12,937,737 - 13,039,567 (+)	Ensembl		GRCm39 Ensembl
GRCm38	X	13,070,982 - 13,173,328 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	X	13,071,498 - 13,173,328 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	X	12,648,624 - 12,750,454 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	X	12,228,496 - 12,328,745 (+)	NCBI		MGSCv36	mm8
Celera	X	10,768,972 - 10,871,748 (+)	NCBI		Celera
Cytogenetic Map	X	A1.1	NCBI
cM Map	X	7.95	NCBI

Usp9x
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955565	1,479,040 - 1,602,070 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955565	1,479,040 - 1,602,070 (-)	NCBI	ChiLan1.0	ChiLan1.0

USP9X
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	X	42,734,028 - 42,881,834 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	X	42,737,410 - 42,887,035 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	X	33,535,543 - 33,683,220 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	X	41,231,814 - 41,380,569 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	X	41,232,041 - 41,379,910 (+)	Ensembl	panpan1.1		panPan2

USP9X
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	X	35,522,873 - 35,676,086 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
Dog10K_Boxer_Tasha	X	22,845,661 - 23,024,786 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	X	35,571,563 - 35,712,343 (+)	NCBI		ROS_Cfam_1.0
UMICH_Zoey_3.1	X	35,624,905 - 35,803,984 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	X	35,597,545 - 35,776,521 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	X	35,640,469 - 35,819,595 (+)	NCBI		UU_Cfam_GSD_1.0

Usp9x
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	X	27,780,903 - 27,894,664 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936502	7,649,842 - 7,735,382 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936502	7,649,808 - 7,732,731 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

USP9X
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	X	36,760,865 - 36,885,250 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	X	36,736,049 - 36,888,702 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1

USP9X
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	X	38,255,414 - 38,402,855 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	Y	489,840 - 626,098 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
ChlSab1.1 Ensembl	X	38,256,008 - 38,403,323 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666076	3,448,010 - 3,595,885 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Usp9x
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624762	14,405,560 - 14,527,639 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624762	14,403,361 - 14,527,854 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in Usp9x
684 total Variants

miRNA Target Status

Predicted Target Of

	Summary Value
Count of predictions:	1123
Count of miRNA genes:	360
Interacting mature miRNAs:	492
Transcripts:	ENSRNOT00000048980
Prediction methods:	Microtar, Miranda, Pita, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (mRatBN7.2)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
70165	Bp64	Blood pressure QTL 64	5.2		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	X	1448129	31706553	Rat
1298071	Edpm12	Estrogen-dependent pituitary mass QTL 12	3.2		pituitary gland mass (VT:0010496)	pituitary gland wet weight (CMO:0000853)	X	2927898	47927898	Rat
731181	Uae27	Urinary albumin excretion QTL 27	2.7	0.0059	urine albumin amount (VT:0002871)	urine albumin excretion rate (CMO:0000757)	X	1	43491017	Rat
70166	Bp65	Blood pressure QTL 65	5.8		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	X	1447972	11374346	Rat
10755455	Coatc13	Coat color QTL 13		0	coat/hair pigmentation trait (VT:0010463)	pigmented ventral coat/hair area to total ventral coat/hair area ratio (CMO:0001812)	7	4406000	49406000	Rat
631666	Iddm5	Insulin dependent diabetes mellitus QTL 5			blood glucose amount (VT:0000188)	plasma glucose level (CMO:0000042)	X	4494549	49494549	Rat
634325	Bw13	Body weight QTL 13	0		body mass (VT:0001259)	body weight (CMO:0000012)	X	1447972	20991088	Rat
631204	Gluco15	Glucose level QTL 15		0.001	blood glucose amount (VT:0000188)	blood glucose level area under curve (AUC) (CMO:0000350)	X	1623715	22646544	Rat

Markers in Region

RH127557

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	X	9,589,002 - 9,589,202 (+)	MAPPER	mRatBN7.2
Rnor_6.0	X	10,523,776 - 10,523,975	NCBI	Rnor6.0
Rnor_6.0	X	10,510,211 - 10,510,410	NCBI	Rnor6.0
Rnor_5.0	X	11,308,593 - 11,308,792	UniSTS	Rnor5.0
Rnor_5.0	X	11,322,158 - 11,322,357	UniSTS	Rnor5.0
RGSC_v3.4	X	21,606,508 - 21,606,707	UniSTS	RGSC3.4
Celera	X	10,119,569 - 10,119,768	UniSTS
Cytogenetic Map	X	q13	UniSTS

RH125670

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	X	9,592,814 - 9,593,046 (+)	MAPPER	mRatBN7.2
Rnor_6.0	X	10,526,220 - 10,526,451	NCBI	Rnor6.0
Rnor_5.0	X	11,324,602 - 11,324,833	UniSTS	Rnor5.0
RGSC_v3.4	X	21,610,320 - 21,610,551	UniSTS	RGSC3.4
Celera	X	10,123,381 - 10,123,612	UniSTS
Cytogenetic Map	X	q13	UniSTS

RH142260

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	X	9,591,801 - 9,591,955 (+)	MAPPER	mRatBN7.2
Rnor_6.0	X	10,513,010 - 10,513,163	NCBI	Rnor6.0
Rnor_5.0	X	11,311,392 - 11,311,545	UniSTS	Rnor5.0
RGSC_v3.4	X	21,609,307 - 21,609,460	UniSTS	RGSC3.4
Celera	X	10,122,368 - 10,122,521	UniSTS
RH 3.4 Map	X	21.6	UniSTS
Cytogenetic Map	X	q13	UniSTS

BF396338

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	X	9,640,927 - 9,641,075 (+)	MAPPER	mRatBN7.2
Rnor_6.0	X	10,573,812 - 10,573,959	NCBI	Rnor6.0
Rnor_5.0	X	11,372,194 - 11,372,341	UniSTS	Rnor5.0
RGSC_v3.4	X	21,660,103 - 21,660,250	UniSTS	RGSC3.4
Celera	X	10,171,446 - 10,171,593	UniSTS
RH 3.4 Map	X	16.2	UniSTS
Cytogenetic Map	X	q13	UniSTS

RH141703

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	X	9,591,548 - 9,591,751 (+)	MAPPER	mRatBN7.2
Rnor_6.0	X	10,512,757 - 10,512,959	NCBI	Rnor6.0
Rnor_5.0	X	11,311,139 - 11,311,341	UniSTS	Rnor5.0
RGSC_v3.4	X	21,609,054 - 21,609,256	UniSTS	RGSC3.4
Celera	X	10,122,115 - 10,122,317	UniSTS
RH 3.4 Map	X	23.9	UniSTS
Cytogenetic Map	X	q13	UniSTS

BG371737

Rat Assembly	Chr	Position (strand)	Source	JBrowse
RH 3.4 Map	X	19.2	UniSTS
Cytogenetic Map	X	q13	UniSTS

D20S998

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	X	9,592,789 - 9,592,908 (+)	MAPPER	mRatBN7.2
Rnor_6.0	X	10,526,195 - 10,526,313	NCBI	Rnor6.0
Rnor_5.0	X	11,324,577 - 11,324,695	UniSTS	Rnor5.0
RGSC_v3.4	X	21,610,295 - 21,610,413	UniSTS	RGSC3.4
Celera	X	10,123,356 - 10,123,474	UniSTS
Cytogenetic Map	X	q13	UniSTS

RH125324

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	X	9,590,527 - 9,590,706 (+)	MAPPER	mRatBN7.2
Rnor_6.0	X	10,525,301 - 10,525,479	NCBI	Rnor6.0
Rnor_6.0	X	10,511,736 - 10,511,914	NCBI	Rnor6.0
Rnor_5.0	X	11,310,118 - 11,310,296	UniSTS	Rnor5.0
Rnor_5.0	X	11,323,683 - 11,323,861	UniSTS	Rnor5.0
RGSC_v3.4	X	21,608,033 - 21,608,211	UniSTS	RGSC3.4
Celera	X	10,121,094 - 10,121,272	UniSTS
Cytogenetic Map	X	q13	UniSTS

USP9X_3261

Rat Assembly	Chr	Position (strand)	Source	JBrowse
RGSC_v3.4	X	21,609,885 - 21,610,490	UniSTS	RGSC3.4
Celera	X	10,122,946 - 10,123,551	UniSTS
Cytogenetic Map	X	q13	UniSTS

px-12d6

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	X	9,589,184 - 9,589,297 (+)	MAPPER	mRatBN7.2
Rnor_6.0	X	10,523,958 - 10,524,070	NCBI	Rnor6.0
Rnor_6.0	X	10,510,393 - 10,510,505	NCBI	Rnor6.0
Rnor_5.0	X	11,308,775 - 11,308,887	UniSTS	Rnor5.0
Rnor_5.0	X	11,322,340 - 11,322,452	UniSTS	Rnor5.0
RGSC_v3.4	X	21,606,690 - 21,606,802	UniSTS	RGSC3.4
Celera	X	10,119,751 - 10,119,863	UniSTS
Cytogenetic Map	X	q13	UniSTS

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	nervous system	renal system	reproductive system	respiratory system
9	11	49	113	91	90	59	25	59	6	218	97	93	45	60	31

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001135923	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001434267	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006256670	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039099859	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039099860	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039099861	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039099862	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039099863	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039099864	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039099865	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039099867	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063280114	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063280115	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063280116	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	CH474009	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ227315	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ233578	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000021	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000048980 ⟹ ENSRNOP00000043441

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	X	9,590,589 - 9,696,711 (-)	Ensembl
Rnor_6.0 Ensembl	X	10,511,797 - 10,630,297 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000080651 ⟹ ENSRNOP00000072190

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	X	9,588,825 - 9,696,695 (-)	Ensembl
Rnor_6.0 Ensembl	X	10,510,033 - 10,630,281 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000093067 ⟹ ENSRNOP00000075990

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	X	9,594,237 - 9,696,711 (-)	Ensembl

RefSeq Acc Id:

NM_001135923 ⟹ NP_001129395

RefSeq Status:

PROVISIONAL

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	X	12,261,633 - 12,369,491 (-)	NCBI
mRatBN7.2	X	9,588,825 - 9,696,695 (-)	NCBI
Rnor_6.0	X	10,510,033 - 10,630,281 (-)	NCBI
Rnor_5.0	X	11,308,415 - 11,458,704 (-)	NCBI
RGSC_v3.4	X	21,606,330 - 21,718,042 (-)	RGD
Celera	X	10,119,391 - 10,226,786 (-)	NCBI

Sequence:

show sequence

AGTGGGAGTCTGCGCTGCTGCCGCTGCTGCCGCTGCTGTCGCTGTCGCTGCTGCCGCTGCCGCC
GCCGACACTGCCACTGGCCGTGCGGGTTTTCTTTTTCTTTTTCTTTTTCTCTTTTCTTTTTTGA
TTTGTTGGATCCGCCATATTGACGAGGCTGTGGTACTCAAAGCTGCGGAAGCTAGACTCCGCCG
GTGGCGGAGCCGCAACCTCTCGGTTATGCAATGGTCTCTGCAAGATGTTTTATTCTTGAATTGG
AACCTTTTAAGACTGACAAATGCTGGTACTTCGTCTTCTATAAGTGGACTATAATTTCTTTTCT
TAAGACAACTACATAAGCAGACAAAATTGCAAAGATCTGCCCTGTGTCGAGTATGACAGCCACG
ACTCGTGGCTCTCCAGTTGGAGGGAATGACAACCAGGGCCAAGCTCCTGATGGACAGTCTCAGC
CCCCCCTCCAACAGAATCAGACTTCATCGCCTGATTCATCCAATGAAAATTCCCCTGCAACTCC
TCCTGATGAGCAAGGCCAAGGTGATGCTCCTCCCCAGATTGAAGATGAGGAACCTGCATTTCCA
CACACTGACCTGGCAAAGTTAGATGATATGATCAACAGGCCTCGCTGGGTCGTTCCAGTTTTGC
CGAAAGGGGAATTAGAAGTGCTTTTAGAAGCTGCTATTGATCTTAGTAAGAAAGGCCTTGATGT
CAAAAGTGAAGCATGTCAGAGATTTTTCCGAGATGGGCTAACAATCTCATTCACAAAAATCCTT
ACAGATGAAGCAGTGAGTGGCTGGAAGTTTGAAATTCATAGATGTATTATTAACAATACTCATC
GCCTGGTGGAGCTGTGTGTGGCTAAGTTAGCCCAAGACTGGTTTCCACTTCTAGAACTTCTTGC
CATGGCCTTAAATCCTCATTGCAAATTCCATATCTACAATGGTACACGTCCCTGCGAGTCAGTG
TCCTCAAGTGTTCAGTTGCCTGAAGATGAACTCTTTGCTCGTTCTCCAGACCCTCGATCACCAA
AAGGTTGGCTAGTGGATCTCCTCAACAAATTTGGCACTTTAAATGGATTCCAGATACTGCATGA
TCGTTTTATTAATGGATCAGCATTAAATGTTCAGATAATTGCAGCCCTTATTAAACCATTTGGA
CAGTGCTATGAGTTTCTTACTCTTCACACGGTGAAAAAATACTTTCTTCCAATAATAGAAATGG
TTCCACAGTTTTTAGAAAACTTAACTGATGAAGAGCTGAAGAAAGAAGCAAAGAATGAAGCCAA
AAATGATGCTCTCTCAATGATTATTAAATCATTGAAGAGTTTAGCTTCACGAGTTCCTGGACAG
GAAGAAACTGTAAAGAACTTAGAAATATTTAGGTTAAAAATGATACTTAGATTATTGCAAATTT
CTTCCTTCAATGGAAAGATGAATGCACTGAATGAGGTTAATAAGGTGATTTCCAGTGTGTCATA
CTATACCCATCGGCATGGCAGTTCTGAGGAAGAAGAGTGGCTCACAGCAGAGAGGATGGCTGAA
TGGATACAGCAGAACAATATTTTATCAATAGTTTTACGAGATAGTCTTCATCAACCACAGTATG
TAGAGAAACTAGAAAAGATTCTTCGCTTTGTCATAAAAGAAAAAGCTCTGACCTTGCAAGATCT
TGATAATATCTGGGCAGCACAGGCAGGGAAACATGAAGCCATCGTAAAGAATGTCCATGATCTA
CTGGCCAAATTGGCATGGGATTTTTCTCCTGAACAACTTGATCATCTTTTTGATTGCTTTAAGG
CCAGTTGGACAAATGCAAGTAAAAAGCAACGTGAAAAGCTCCTTGAGCTGATTCGTCGTCTTGC
AGAAGATGATAAAGATGGTGTGATGGCACATAAAGTGTTGAACCTTCTGTGGAATCTAGCTCAC
AGTGATGATGTGCCTGTGGATATCATGGACTTGGCTCTCAGTGCTCACATCAAAATACTAGATT
ATAGTTGCTCCCAGGACCGGGACACACAAAAGATCCAGTGGATAGATCGCTTCATAGAAGAACT
TCGCACAAATGACAAGTGGGTCATTCCTGCACTGAAACAAATTAGAGAAATTTGCAGTTTGTTT
GGTGAAGCACCTCAAAATTTGAGTCAAACTCAGAGAAGTCCCCATGTATTTTATCGCCATGATT
TAATCAATCAACTTCAGCACAATCATGCCCTAGTTACTTTGGTAGCAGAAAACCTTGCAACTTA
CATGGAAAGCATGAGACTGTATGGCAGAGACAATGAAGACTATGACCCACAAACTGTGAGAGTG
GGAAGTAGATATAGTCATGTTCAAGAAGTCCAAGAACGTCTTAACTTTCTTAGATTTTTATTGA
AGGATGGCCAGCTATGGCTGTGTGCTCCTCAGGCAAAACAAATATGGAAGTGCTTAGCAGAGAA
TGCGGTTTATCTTTGTGACCGTGAAGCCTGCTTTAAGTGGTATTCCAAATTAATGGGAGATGAA
CCAGACTTAGATCCTGATATCAATAAGGACTTCTTTGAAAGTAATGTGCTTCAGCTTGATCCTT
CACTATTAACTGAAAATGGAATGAAATGTTTTGAGAGATTCTTCAAAGCTGTGAATTGTCGAGA
AGGAAAACTAGTAGCAAAAAGAAGAGCCTATATGATGGATGATTTGGAATTGATAGGATTAGAC
TATCTTTGGAGGGTTGTAATTCAGAGTAATGATGATATTGCCAGCCGAGCTATTGATCTCCTCA
AAGAGATATACACAAACCTTGGTCCAAGACTGCAGGTCAATCAGGTGGTGATCCATGAAGACTT
CATTCAGTCTTGCTTTGATCGTTTGAAAGCCTCTTATGACACGTTGTGTGTTTTGGATGGTGAC
AAAGACAGTATTAATTGTGCAAGACAGGAAGCTGTTCGAATGGTCCGAGTATTAACTGTTTTAA
GAGAATATATAAATGAATGTGACAGTGATTATCATGAAGAAAGAACAATTTTGCCTATGTCAAG
AGCTTTCCGTGGTAAACACCTCTCTTTTATAGTTCGGTTTCCAAACCAGGGCAGACAAGTAGAT
GACTTGGAAGTTTGGTCTCATACAAATGATACCATTGGTTCAGTTCGACGATGTATACTAAATC
GCATTAAAGCCAATGTAGCTCATACAAAAATTGAACTCTTTGTGGGTGGTGAGCTTATTGATCC
TGGAGATGACAGAAAGTTGATTGGACAATTAAACCTAAAAGATAAATCACTAATTACAGCCAAA
CTTACACAAATCAGCTCCAATATGCCGTCAAGTCCTGATAGCTCCTCTGATTCCTCAACTGGAT
CTCCTGGAAACCATGGTAATCATTACAGTGATGGTCCCAACCCAGAGGTAGAAAGCTGTTTGCC
TGGAGTGATAATGTCACTTCATCCCAGATACATCTCTTTCCTTTGGCAAGTTGCAGACTTAGGG
AGCAGCCTAAATATGCCCCCTCTTAGAGATGGAGCAAGAGTTCTTATGAAACTTATGCCGCCAG
ATAGTACAACAATAGAAAAATTAAGAGCTATTTGTTTAGATCATGCCAAACTTGGAGAAAGCAG
CCTTAGTCCATCTCTTGACTCACTTTTCTTTGGTCCTTCAGCCTCACAAGTGCTATACCTAACA
GAGGTAGTCTATGCCCTGTTAATGCCTGCTGGTGCACCCCTGGCTGATGACTCCTCTGATTTTC
AGTTTCACTTCTTGAAAAGTGGTGGTTTGCCCCTTGTTCTGAGTATGCTAACCAGAAATAACTT
CCTACCAAATGCTGATATGGAAACTCGAAGGGGTGCCTACCTCAATGCTCTTAAAATAGCCAAA
CTGTTACTAACTGCCATTGGCTATGGCCATGTTCGGGCTGTGGCAGAAGCATGTCAGCCAGGTG
TAGAAGGCGTGAATCCTATGACATCGGTCAACCAAGTAACTCATGATCAAGCAGTGGTGCTACA
AAGTGCCCTTCAGAGCATTCCTAACCCATCATCTGAATGCATGCTTAGAAACGTGTCTGTTCGT
CTTGCTCAGCAGATTTCTGATGAGGCTTCAAGATATATGCCTGATATTTGTGTAATTAGAGCTA
TACAAAAGATTATTTGGACATCAGGATGTGGGGGATTACAACTGGTATTCAGCCCAAATGAGGA
AGTCACAAAAATTTATGAGAAGACCAATGCAGGCAATGAGCCAGACCTTGAAGATGAACAGGTT
TGCTGTGAGGCATTGGAAGTGATGACACTGTGTTTCGCCCTGATTCCAACAGCCTTAGATGCTC
TAAGTAAAGAAAAGGCTTGGCAGACATTTATTATTGACTTACTGTTACACTGTCACAGCAAAAC
TGTCCGTCAAGTAGCACAGGAACAATTCTTCTTAATGTGCACCAGATGTTGCATGGGACACAGG
CCTCTACTTTTCTTCATTACTCTACTCTTTACTGTTTTGGGGAGCACAGCCAGAGAGAGGGCTA
AACATTCAGGCGACTACTTTACTCTTTTAAGGCATCTTCTTAATTACGCTTACAACAGTAACAT
TAATGTACCCAATGCTGAAGTTCTTCTAAATAATGAAATTGATTGGCTTAAAAGAATTAGGGAT
GATGTTAAAAGAACAGGTGAAACAGGCGTTGAAGAGACAATCTTAGAAGGACACCTTGGGGTTA
CAAAGGAGCTACTGGCTTTTCAGACCCCTGAGAAAAAGTTTCATATTGGTTGTGAAAAGGGGGG
TGCTAATCTCATTAAAGAATTAATCGACGATTTCATCTTTCCTGCATCCAATGTTTACCTCCAG
TATATGAGAAATGGAGAACTCCCTGCTGAGCAGGCCATTCCTGTCTGTGGTTCACCAGCCACAA
TTAATGCTGGTTTTGAGTTACTTGTAGCATTAGCTGTTGGCTGTGTAAGGAACCTCAAACAGAT
AGTAGATTCTTTGACTGAAATGTATTACATTGGTACAGCAATAACTACTTGTGAGGCACTTACT
GAGTGGGAATACCTGCCACCTGTTGGACCCCGTCCACCAAAAGGATTTGTGGGGCTGAAAAATG
CTGGTGCTACTTGTTACATGAATTCTGTGATTCAGCAACTCTATATGATTCCCTCTATCAGGAA
CGGTATTCTTGCAATTGAAGGCACAGGTAGTGATGTAGATGATGATATGTCTGGGGATGAGAAG
CAGGACAATGAGAGCAATGTTGATCCCAGGGATGATGTGTTTGGATATCCTCAACAATTTGAAG
ACAAACCACCACTGAGTAAAACAGAAGATAGAAAAGAGTACAATATTGGTGTTCTAAGACACCT
TCAAGTTATCTTTGGCCATTTAGCTGCTTCTCGACTACAGTACTATGTGCCCAGAGGATTTTGG
AAACAGTTCAGGCTTTGGGGTGAGCCTGTTAATCTTCGTGAACAACATGATGCTTTAGAGTTCT
TTAATTCATTGGTGGATAGTTTAGATGAAGCTTTAAAAGCCTTAGGGCATCCAGCTATGCTAAG
TAAAGTCTTGGGAGGTTCCTTCGCTGATCAGAAAATTTGTCAAGGCTGCCCACATAGGTATGAA
TGTGAAGAATCTTTTACGACTCTGAATGTAGACATTAGAAACCACCAAAATCTTCTTGATTCTT
TGGAACAGTATGTCAAAGGAGATTTACTAGAAGGGGCAAATGCTTATCATTGTGAAAAATGCAA
TAAAAAGGTTGATACTGTAAAGCGCTTGCTAATTAAAAAGTTGCCTCCTGTTCTTGCTATCCAA
CTAAAACGATTCGATTATGACTGGGAAAGAGAATGTGCAATCAAGTTCAATGATTACTTTGAGT
TTCCTCGAGAGTTAGACATGGAGCCGTACACAGTTGCAGGTGTTGCTAAACTAGAGGGAGATAA
TGTCAACCCAGAAAGTCAGCTGATACAACAGAATGAGCAGTCTGAAAGCGAAAAAGCCGGAAGC
ACAAAATACAGACTTGTGGGTGTGCTTGTACACAGTGGTCAAGCAAGTGGGGGACATTACTATT
CTTACATCATTCAGAGGAATGGAGGAGATGGTGAAAAAAATCGTTGGTATAAATTTGATGATGG
AGATGTAACAGAGTGTAAAATGGATGATGATGAAGAAATGAAAAACCAGTGTTTTGGTGGCGAG
TACATGGGAGAAGTGTTTGATCACATGATGAAGCGCATGTCGTACAGGCGGCAGAAAAGGTGGT
GGAATGCATATATACTTTTTTATGAAAGAATGGATACGATAGATCATGATGATGAGGTGATAAG
ATACATATCAGAGATTGCTATCACCACAAGGCCCCATCAGATTGTTATGCCATCGGCCATTGAA
AGAAGTGTGCGGAAGCAGAATGTCCAATTCATGCATAACCGAATGCAGTACAGTTTGGAATATT
TTCAGTTTATGAAAAAGCTACTTACATGTAATGGTGTTTATTTAAACCCTCCACCAGGGCAAGA
TCACCTGTCTCCTGAAGCAGAAGAAATCACTATGATTAGTATTCAGCTTGCTGCTAGGTTCCTT
TTTACTACAGGATTTCACACAAAGAAAATAGTCCGAGGATCCGCCAGTGATTGGTATGATGCAT
TGTGTATTCTCCTCCGTCACAGCAAGAATGTGCGGTTTTGGTTTGCTCACAATGTGCTTTTTAA
TGTTTCAAATCGATTCTCTGAGTACCTTTTGGAATGCCCTAGTGCAGAAGTGAGAGGTGCATTT
GCTAAACTTATAGTTTTCATTGCACACTTTTCCTTACAAGATGGGCCTTGTCCTTCACCTTTTG
CATCTCCTGGACCTTCTAGTCAGGCTTATGATAACTTAAGTTTGAGTGACCACCTACTAAGAGC
AGTACTAAATCTCTTGAGGAGGGAGGTTTCAGAGCATGGACGTCATTTACAGCAGTATTTCAAC
TTGTTTGTAATGTATGCCAATTTAGGAGTGGCAGAGAAAACACAGCTGCTCAAACTGAGTGTAC
CTGCTACCTTTATGCTTGTGTCCTTAGATGAAGGTCCTGGTCCTCCAATTAAATATCAGTATGC
TGAATTAGGCAAATTATACTCCGTAGTGTCACAGTTAATCCGCTGTTGCAATGTCTCTTCAAGA
ATGCAGTCTTCAATCAATGGTAATCCTTCTCTTCCAAATCCTTTTGGTGATCCTAATTTATCAC
AACCTATAATGCCAATTCAACAAAATGTGGTAGACATTTTATTTGTGAGAACAAGTTATGTGAA
GAAAATTATTGAAGACTGCAGTAACTCTGATGAGACCGTCAAATTGCTTCGCTTTTGCTGCTGG
GAGAATCCTCAGTTCTCATCTACTGTCCTGAGTGAACTTCTTTGGCAGGTTGCGTATTCCTATA
CTTACGAACTCCGGCCCTATTTGGATCTGCTTTTACAAATCTTACTGATTGAAGACTCCTGGCA
GACTCACAGAATTCATAATGCCCTTAAAGGAATTCCAGATGACCGAGATGGGCTGTTTGACACA
ATTCAGCGTTCTAAGAATCACTATCAAAAAAGAGCATACCAATGTATAAAATGTATGGTAGCCC
TCTTTAGCAGTTGTCCTGTGGCTTACCAAATCCTGCAGGGCAATGGAGATCTTAAAAGGAAATG
GACCTGGGCAGTAGAGTGGCTTGGAGATGAACTCGAAAGAAGACCATACACTGGCAATCCTCAG
TACACTTACAACAACTGGTCTCCTCCAGTGCAAAGCAATGAAACATCAAATGGCTACTTCTTGG
AGAGATCACATAGCGCTAGGATGACACTTGCAAAAGCTTGTGAACTCTGTCCTGAGGAGGAACC
AGATGACCAAGATGCCCCAGATGAGCATGAATCACCTCCACCTGAAGATGCCCCATTATACCCC
CATTCCCCTGGATCTCAATATCAGCAGAATAACCATGTGCATGGACAGCCCTATACAGGCCCAG
CCGCACATCACATGAACAACCCTCAGAGAACTGGCCAACGAGCACAAGAAAATTATGAAGGCAG
TGAAGAAGTGTCCCCACCTCAGACCAAGGATCAGTGAAATGCACATATTAACTGGTTCCATCAA
GACTGTGCACCCAGGCCTTACAGTCCAACTTTTTTCTGTGTCTGGCTAATATTTCAAACTAGAA
AACTATTCCTAATCAACATGGAGTGGAGAGTTTATTCACTGTCTTATCTGCAGAAATTTGCTGT
CAATATATAACCCGCCTGCAGTGGAAAGTGTATAGTGTTTTGTAATAAATGGCCTGATGCTAAT
GTGTAAATGGCAAAGGTGTATATAGTATATTAATGTTTGACTGTTAATTCTTAAGCAAGAGACT
TTTTTTTTTCTTGATGAGACTCACAGATCTACAAAACTACATTAATTTTCTTGTTACTCCCTCT
GCACTCTGCAGCCAGTGTTGCCTACCTTGTGGCAGTTGGATCACCTCCTTTACAAAAACAAAAA
GTAAACCAACATCAACAAAACAGCCCATTCATTCATGTCACACCAATAGTTTCGTGTTCATTGT
TTGCCACTGGAGTCAATTTTACTATGAGCAATGTAAGGCTGGTTACCTTTTAATTATTTGGTTG
ATGTGGAAAATTGGTGATGTACTATGTTTCTAGGTCTTTTTCATTGCCTTTTTATTCTGATGTT
AGGTTAATCACTTTGAAGCTATAGATATGCTGTAACATTTAGCATGGCTTCACACAAGTTAGTG
TAGCCAGTGAAGAAATATTACCATAATGACTGCAGTTGTCCTGACATGGCATCTGCATTGCTCG
GAGCTTTCCTTCTTAAACCCTAGGTTATAAACTACAGACTGAGGGAGAACTGTTGCAAGCAGGC
GGTTCTCAATTACACACATGTTCTTCTCATGTTTGACAGTGTGATCTCTGGGTGGAATAAAGAA
CACTTAAACTTAACAACTTGGTAATGGGAATTTTGAAAGATTTAAAACAAAATAAGCAAAAATT
TGCTACACCAGGATGCTGGCTGGAGCCTAGTAGACTGTATTTGGTGTGCTTATTTCGTTCTTTG
CTAGAGCTTACTAAGTGACTCTTTTCAAACTGTCCTTCTGTGCGATCCCAGTGATGCGGAAGTC
CTCAGAATCCCACAATCTTTGGAGTACCTTTGCACCAAGGTCTCTGGCTGATTTCTCTGCTCAG
TCATAATTTTACTTGAAAGCAAAATGGTCCTAGCTCCTTTTCCATTATTCCAAAAAATTTAACA
TTCAAAGCAGGGTCTAATTTAAAACGTTACTGGTAGTTAATATAATTGACTGATTAAATTTTAG
AGTAAACAATTTGAATAAAGATAAAGGAATCAGTTAAAACTGTATTTCAAAGAAAATTGGTGAC
TTGAATATGTGTAATTTTTTGGAACCTGTCTAAAACCAAATACCCCTGCAAACAGATACAACCT
ACCCTATTTAAATATTTTGCTGTTTTATTTTATAGAAATTATTTTGCTGAATTTGCAAATAGAA
TTTGATTTAAGAAGAACTTTTTGTCCTGTGGTGTGTTTGGGGGTTTTGGTACCTTCTCTGTCTG
CCTGTGTGTGTGTGTGTGTCTGCCTGCCCCCCACCCCTCTCTGAGGACTGCATATTTCTGGAAA
GCTAATTCTGTGCATAGCATGTTTACACAACCTACAGTGAAGATTTTAAGTCTCATTAAGTTTT
TGTGCACAGAAAGATGGGGTCTTTGGCTCTTTACTAAAGACTTGGAGAACAGGATGTTGACGCT
GTAAAAGTTCCCTAGCAATCAATCTTACACTTTTTGTATGTTTTTATATACATGTGTATTTAAT
GAGCACAAGCTTGGTTGTATTTTTATGATTCAGTTGATAGGAAAATGTTGAAAGGCTATAGTTG
GCATTGATCAAAGCAGAAGCAAAATTGAGCATTATGTTATTTTGTGATTTAAAAGGGGCAGTAT
TTAAGATAAAGGTTTAGGTGTCTTATTTGCAGTATTCCACAGTTCTGCTTCTAGGCTGCCTGTA
ATTTTAGCAACTTTTGACACCAGCTAGAGTCTGTTTACATCAGAATTTGCTTTTGTTTTGGTTT
TTGGAGCCTGGGGATCCAGGGCCTGAAGTCCCCCCAGGCAAGTGCTCTACAACTCAGGCTGAGC
CTCCAGCCCGAGTTGAAGTTTGAGCAAAGATTGTACAGTGTTTGCAGTTCCAACTGGAAGTTTT
TTAAAGTTCTTCAAGTAGTGAAGTAGGTTGGCTTTGTTTGGACCAGTAACTGGTACTAGTTACA
GTATCTTACCATCTGACATGCGAGTTTGGGATTTTCTGCTTCTTAAGGAAATTATGAAATACTT
AAAACTTAGTGACTTCCTAGATAAGAGAAAACTTGACATTTTCAAAGGCTGTGAATTTTTCTTG
GAGGAATTCTACCCCCTACCCCCTTTAGTTGCTTTGAGTGTGTAAGCCCACCAGTTCCAGATGA
TGAGGGCTTATGAGTCATGGTTCCCTTTCATTTGAGGAAGAGTAGGCCTATGTCGTGAACAGGA
GTGAGGGAAGGTGAACAGAGTTATTTTTGTTTGTTTGTGCAAATTATTTTCTATATTAACTCTT
TAAGCATTAATGTATAACCGGAAATTTTAAGATGCATGTTATTGTAAGAGCAACATAGTGGTGA
TTTTGAGGTCTTTCTCTAAAACATAAGTGGCACATTTTAAAATTCAAGTCTTAAAGTGCCTCAA
AGTTATTTTATTCTCTCAACTGATTTCTTTTGAGCCATATGTTTTCTCCTTTAAATGTTTGTTA
TAGAATCACTAGTCTTCGTTTGAAGTACTCCCACGTTTCTAAATGGCATGATTACTCTATTGAA
GACAGTAGAATCTGTTAACGTAAGACTGAAGAGATTTTGGGGTTGGGGATTTAGCTCAGTGGTA
GAGCGCTTGCCTAGGAAGCGCAAGGCCCTGGGTTCGGTCCCCAGCTCCGAAAAATAGACCCAAA
AAAAAAAAAAAAAAAAAAAGACTGAAGAGATTTTAGTTGTGCAACTGTGTAAACTGGGGCTCTG
CCCAGTCGGATCTAAGTATTTTTGTGTACAACTTGGTAAACACCATATTGCTGCTGTTTCTAAG
CCCTCCACCTTACTGACTTCTCGTGTTTAGCATCGCAGAGGCAGAAATACAAGCATAAACATAT
ATGGGCTTTGTTTCTTTTTGTTGATTTTTCTCAGTGATGATTTCCCAGCTTTTTTTTTTTGTCT
CTTAGCTATGATTATACAGACCTAGAATTATTCAAATGTTTTCTATTTTCATGATTAACTTTTA
TTAGGGGACAATAACAACTTAAGTCTTTAATCCTCATATTGGTTAAAAGATGAGGAGCCTTTTT
TATTTGAATTACTTTTGTAAAAGAAAGCAACAGTCTGAATATTCAGGTGACTACTTTGGCATAG
TTCTTCAGGTTTTTATTAGTGTTTTTCCAGGTTATGTTTTTCCCATGAACTTTTTACTTTGTTA
ATTTTGTGGTTAATTTGGTGGCTATATCCTGCCTTATTTAGGATTTTAGGAAATTGCCTTTTTG
TGATAAGTGCCCAGTTTTTATTTCTAGTTTGAAGGTACGAGGACATACCGACTGCTGATAAAGG
AAAACAGCACCCCTTTGCCCCAGCTTTTGTGTTACCAATAGAACCATTCGCAGTACTGGTTTCA
TTGTAGGGCCCAACCAGAATTGGTCCTGCACCTACATGAGTGTTGCATATTTGGAAAGGGTTTG
GGTGTGATAAATCACTACGGAAGTGCTGAATGTATTAAGAACTCGCTGCCGATTGTATTTCTAA
CGATTATTTTGTGTTTGCACTTGTCCTCCAAGCTTCCAGGTGTAAGGGGGAAAGGTGAACCACA
TTTTAAAGTCACTAATGAGTGCAATTTTTTTTGGAATTGGGGTTCCCAAGAGGAAATTTCACCA
CCCAAATCTTACATACTTCTTAGCCTTTTACAAGCCAACAGACTGACATAAAGATTGTCTGCAA
TTCGTAAGATCTAGCACATATACAAAAATAAAACTTTATAAATTAAATTTGGGTTTTTCTTTCA
TTTATTAACATAAGGTTTCCCCCTATATTGCTAGGGGTGGCATGCAGGGCATCAAATGTATATA
GGCAAGTGCCATATCACTCAGCCACATTTGGCCCTTG

hide sequence

RefSeq Acc Id:

XM_039099859 ⟹ XP_038955787

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	X	12,261,751 - 12,369,516 (-)	NCBI
mRatBN7.2	X	9,588,943 - 9,696,011 (-)	NCBI

RefSeq Acc Id:

XM_039099860 ⟹ XP_038955788

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	X	12,261,751 - 12,399,780 (-)	NCBI
mRatBN7.2	X	9,588,943 - 9,726,993 (-)	NCBI

RefSeq Acc Id:

XM_039099861 ⟹ XP_038955789

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	X	12,261,751 - 12,399,780 (-)	NCBI
mRatBN7.2	X	9,588,943 - 9,726,993 (-)	NCBI

RefSeq Acc Id:

XM_039099862 ⟹ XP_038955790

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	X	12,261,751 - 12,368,531 (-)	NCBI
mRatBN7.2	X	9,588,943 - 9,695,584 (-)	NCBI

RefSeq Acc Id:

XM_039099863 ⟹ XP_038955791

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	X	12,261,751 - 12,369,516 (-)	NCBI
mRatBN7.2	X	9,588,943 - 9,696,011 (-)	NCBI

RefSeq Acc Id:

XM_039099864 ⟹ XP_038955792

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	X	12,261,751 - 12,369,516 (-)	NCBI
mRatBN7.2	X	9,588,943 - 9,696,011 (-)	NCBI

RefSeq Acc Id:

XM_039099865 ⟹ XP_038955793

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	X	12,261,751 - 12,369,516 (-)	NCBI
mRatBN7.2	X	9,588,943 - 9,696,011 (-)	NCBI

RefSeq Acc Id:

XM_039099867 ⟹ XP_038955795

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	X	12,261,751 - 12,346,895 (-)	NCBI
mRatBN7.2	X	9,588,943 - 9,674,098 (-)	NCBI

RefSeq Acc Id:

XM_063280114 ⟹ XP_063136184

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	X	12,261,751 - 12,399,780 (-)	NCBI

RefSeq Acc Id:

XM_063280115 ⟹ XP_063136185

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	X	12,261,751 - 12,399,780 (-)	NCBI

RefSeq Acc Id:

XM_063280116 ⟹ XP_063136186

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	X	12,261,751 - 12,399,780 (-)	NCBI

Protein Sequences


Protein RefSeqs	NP_001129395	(Get FASTA)	NCBI Sequence Viewer
	NP_001421196	(Get FASTA)	NCBI Sequence Viewer
	XP_038955787	(Get FASTA)	NCBI Sequence Viewer
	XP_038955788	(Get FASTA)	NCBI Sequence Viewer
	XP_038955789	(Get FASTA)	NCBI Sequence Viewer
	XP_038955790	(Get FASTA)	NCBI Sequence Viewer
	XP_038955791	(Get FASTA)	NCBI Sequence Viewer
	XP_038955792	(Get FASTA)	NCBI Sequence Viewer
	XP_038955793	(Get FASTA)	NCBI Sequence Viewer
	XP_038955795	(Get FASTA)	NCBI Sequence Viewer
	XP_063136184	(Get FASTA)	NCBI Sequence Viewer
	XP_063136185	(Get FASTA)	NCBI Sequence Viewer
	XP_063136186	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	EDL97646	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000043441.3
	ENSRNOP00000072190.2
	ENSRNOP00000075990.2

RefSeq Acc Id:	NP_001129395 ⟸ NM_001135923
- Peptide Label:	isoform 2
- UniProtKB:	A6JZY9 (UniProtKB/TrEMBL), D3ZC84 (UniProtKB/TrEMBL)
- Sequence:	show sequence MTATTRGSPVGGNDNQGQAPDGQSQPPLQQNQTSSPDSSNENSPATPPDEQGQGDAPPQIEDEE PAFPHTDLAKLDDMINRPRWVVPVLPKGELEVLLEAAIDLSKKGLDVKSEACQRFFRDGLTISF TKILTDEAVSGWKFEIHRCIINNTHRLVELCVAKLAQDWFPLLELLAMALNPHCKFHIYNGTRP CESVSSSVQLPEDELFARSPDPRSPKGWLVDLLNKFGTLNGFQILHDRFINGSALNVQIIAALI KPFGQCYEFLTLHTVKKYFLPIIEMVPQFLENLTDEELKKEAKNEAKNDALSMIIKSLKSLASR VPGQEETVKNLEIFRLKMILRLLQISSFNGKMNALNEVNKVISSVSYYTHRHGSSEEEEWLTAE RMAEWIQQNNILSIVLRDSLHQPQYVEKLEKILRFVIKEKALTLQDLDNIWAAQAGKHEAIVKN VHDLLAKLAWDFSPEQLDHLFDCFKASWTNASKKQREKLLELIRRLAEDDKDGVMAHKVLNLLW NLAHSDDVPVDIMDLALSAHIKILDYSCSQDRDTQKIQWIDRFIEELRTNDKWVIPALKQIREI CSLFGEAPQNLSQTQRSPHVFYRHDLINQLQHNHALVTLVAENLATYMESMRLYGRDNEDYDPQ TVRVGSRYSHVQEVQERLNFLRFLLKDGQLWLCAPQAKQIWKCLAENAVYLCDREACFKWYSKL MGDEPDLDPDINKDFFESNVLQLDPSLLTENGMKCFERFFKAVNCREGKLVAKRRAYMMDDLEL IGLDYLWRVVIQSNDDIASRAIDLLKEIYTNLGPRLQVNQVVIHEDFIQSCFDRLKASYDTLCV LDGDKDSINCARQEAVRMVRVLTVLREYINECDSDYHEERTILPMSRAFRGKHLSFIVRFPNQG RQVDDLEVWSHTNDTIGSVRRCILNRIKANVAHTKIELFVGGELIDPGDDRKLIGQLNLKDKSL ITAKLTQISSNMPSSPDSSSDSSTGSPGNHGNHYSDGPNPEVESCLPGVIMSLHPRYISFLWQV ADLGSSLNMPPLRDGARVLMKLMPPDSTTIEKLRAICLDHAKLGESSLSPSLDSLFFGPSASQV LYLTEVVYALLMPAGAPLADDSSDFQFHFLKSGGLPLVLSMLTRNNFLPNADMETRRGAYLNAL KIAKLLLTAIGYGHVRAVAEACQPGVEGVNPMTSVNQVTHDQAVVLQSALQSIPNPSSECMLRN VSVRLAQQISDEASRYMPDICVIRAIQKIIWTSGCGGLQLVFSPNEEVTKIYEKTNAGNEPDLE DEQVCCEALEVMTLCFALIPTALDALSKEKAWQTFIIDLLLHCHSKTVRQVAQEQFFLMCTRCC MGHRPLLFFITLLFTVLGSTARERAKHSGDYFTLLRHLLNYAYNSNINVPNAEVLLNNEIDWLK RIRDDVKRTGETGVEETILEGHLGVTKELLAFQTPEKKFHIGCEKGGANLIKELIDDFIFPASN VYLQYMRNGELPAEQAIPVCGSPATINAGFELLVALAVGCVRNLKQIVDSLTEMYYIGTAITTC EALTEWEYLPPVGPRPPKGFVGLKNAGATCYMNSVIQQLYMIPSIRNGILAIEGTGSDVDDDMS GDEKQDNESNVDPRDDVFGYPQQFEDKPPLSKTEDRKEYNIGVLRHLQVIFGHLAASRLQYYVP RGFWKQFRLWGEPVNLREQHDALEFFNSLVDSLDEALKALGHPAMLSKVLGGSFADQKICQGCP HRYECEESFTTLNVDIRNHQNLLDSLEQYVKGDLLEGANAYHCEKCNKKVDTVKRLLIKKLPPV LAIQLKRFDYDWERECAIKFNDYFEFPRELDMEPYTVAGVAKLEGDNVNPESQLIQQNEQSESE KAGSTKYRLVGVLVHSGQASGGHYYSYIIQRNGGDGEKNRWYKFDDGDVTECKMDDDEEMKNQC FGGEYMGEVFDHMMKRMSYRRQKRWWNAYILFYERMDTIDHDDEVIRYISEIAITTRPHQIVMP SAIERSVRKQNVQFMHNRMQYSLEYFQFMKKLLTCNGVYLNPPPGQDHLSPEAEEITMISIQLA ARFLFTTGFHTKKIVRGSASDWYDALCILLRHSKNVRFWFAHNVLFNVSNRFSEYLLECPSAEV RGAFAKLIVFIAHFSLQDGPCPSPFASPGPSSQAYDNLSLSDHLLRAVLNLLRREVSEHGRHLQ QYFNLFVMYANLGVAEKTQLLKLSVPATFMLVSLDEGPGPPIKYQYAELGKLYSVVSQLIRCCN VSSRMQSSINGNPSLPNPFGDPNLSQPIMPIQQNVVDILFVRTSYVKKIIEDCSNSDETVKLLR FCCWENPQFSSTVLSELLWQVAYSYTYELRPYLDLLLQILLIEDSWQTHRIHNALKGIPDDRDG LFDTIQRSKNHYQKRAYQCIKCMVALFSSCPVAYQILQGNGDLKRKWTWAVEWLGDELERRPYT GNPQYTYNNWSPPVQSNETSNGYFLERSHSARMTLAKACELCPEEEPDDQDAPDEHESPPPEDA PLYPHSPGSQYQQNNHVHGQPYTGPAAHHMNNPQRTGQRAQENYEGSEEVSPPQTKDQ hide sequence

Ensembl Acc Id:

ENSRNOP00000072190 ⟸ ENSRNOT00000080651

Ensembl Acc Id:

ENSRNOP00000043441 ⟸ ENSRNOT00000048980

RefSeq Acc Id:	XP_038955789 ⟸ XM_039099861
- Peptide Label:	isoform X1
- UniProtKB:	A6JZY9 (UniProtKB/TrEMBL), D3ZC84 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038955788 ⟸ XM_039099860
- Peptide Label:	isoform X1
- UniProtKB:	A6JZY9 (UniProtKB/TrEMBL), D3ZC84 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038955793 ⟸ XM_039099865
- Peptide Label:	isoform X4
- UniProtKB:	A6JZY9 (UniProtKB/TrEMBL), D3ZC84 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038955791 ⟸ XM_039099863
- Peptide Label:	isoform X2
- UniProtKB:	A6JZY9 (UniProtKB/TrEMBL), D3ZC84 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038955792 ⟸ XM_039099864
- Peptide Label:	isoform X3
- UniProtKB:	A6JZY9 (UniProtKB/TrEMBL), D3ZC84 (UniProtKB/TrEMBL), A0A0G2K2C7 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038955787 ⟸ XM_039099859
- Peptide Label:	isoform X1
- UniProtKB:	A6JZY9 (UniProtKB/TrEMBL), D3ZC84 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038955790 ⟸ XM_039099862
- Peptide Label:	isoform X1
- UniProtKB:	A6JZY9 (UniProtKB/TrEMBL), D3ZC84 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038955795 ⟸ XM_039099867
- Peptide Label:	isoform X4
- UniProtKB:	A6JZY9 (UniProtKB/TrEMBL), D3ZC84 (UniProtKB/TrEMBL)

Ensembl Acc Id:

ENSRNOP00000075990 ⟸ ENSRNOT00000093067

RefSeq Acc Id:	XP_063136186 ⟸ XM_063280116
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_063136185 ⟸ XM_063280115
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_063136184 ⟸ XM_063280114
- Peptide Label:	isoform X1

Protein Domains

USP

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-A0A0G2K2C7-F1-model_v2	AlphaFold	A0A0G2K2C7	1-2554	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Promoters

RGD ID:

13701707

Promoter ID:

EPDNEW_R12231

Type:

initiation region

Name:

Usp9x_1

Description:

ubiquitin specific peptidase 9, X-linked

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0	X	10,630,281 - 10,630,341	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1560056	AgrOrtholog
BioCyc Gene	G2FUF-3073	BioCyc
Ensembl Genes	ENSRNOG00000003261	Ensembl, UniProtKB/TrEMBL
Ensembl Transcript	ENSRNOT00000048980.6	UniProtKB/TrEMBL
	ENSRNOT00000080651.2	UniProtKB/TrEMBL
	ENSRNOT00000093067.2	UniProtKB/TrEMBL
Gene3D-CATH	Cysteine proteinases	UniProtKB/TrEMBL
InterPro	ARM-type_fold	UniProtKB/TrEMBL
	DUF3517	UniProtKB/TrEMBL
	Papain_like_cys_pep_sf	UniProtKB/TrEMBL
	Pept_C19ubi-hydrolase_C_CS	UniProtKB/TrEMBL
	Peptidase_C19	UniProtKB/TrEMBL
	Peptidase_C19	UniProtKB/TrEMBL
	UBP24/USP9X/USP9Y_UBL	UniProtKB/TrEMBL
	UCH/PAN2	UniProtKB/TrEMBL
NCBI Gene	363445	ENTREZGENE
PANTHER	UBIQUITIN CARBOXYL-TERMINAL HYDROLASE	UniProtKB/TrEMBL
	UBIQUITIN CARBOXYL-TERMINAL HYDROLASE FAF-X-RELATED	UniProtKB/TrEMBL
	UBIQUITINYL HYDROLASE 1	UniProtKB/TrEMBL
Pfam	DUF3517	UniProtKB/TrEMBL
	UCH	UniProtKB/TrEMBL
	UCH_UBL1	UniProtKB/TrEMBL
PhenoGen	Usp9x	PhenoGen
PROSITE	UCH_2_1	UniProtKB/TrEMBL
	UCH_2_2	UniProtKB/TrEMBL
	UCH_2_3	UniProtKB/TrEMBL
RatGTEx	ENSRNOG00000003261	RatGTEx
Superfamily-SCOP	SSF48371	UniProtKB/TrEMBL
	SSF54001	UniProtKB/TrEMBL
UniProt	A0A0G2K2C7	ENTREZGENE, UniProtKB/TrEMBL
	A0A1B0GWR2_RAT	UniProtKB/TrEMBL
	A6JZY9	ENTREZGENE, UniProtKB/TrEMBL
	D3ZC84	ENTREZGENE, UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2008-10-23	Usp9x	ubiquitin specific peptidase 9, X-linked	Usp9x	ubiquitin specific peptidase 9, X chromosome	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2008-04-30	Usp9x	ubiquitin specific peptidase 9, X chromosome	Usp9x_predicted	ubiquitin specific peptidase 9, X chromosome (predicted)	'predicted' is removed	2292626	APPROVED
2006-03-30	Usp9x_predicted	ubiquitin specific peptidase 9, X chromosome (predicted)	RGD1560056_predicted	similar to ubiquitin specific protease 9, X-linked (fat facets-like, Drosophila) (predicted)	Symbol and Name updated	1299863	APPROVED
2006-03-07	RGD1560056_predicted	similar to ubiquitin specific protease 9, X-linked (fat facets-like, Drosophila) (predicted)	LOC363445	similar to ubiquitin specific protease 9, X-linked (fat facets-like, Drosophila)	Symbol and Name status set to approved	1299863	APPROVED
2006-02-09	LOC363445	similar to ubiquitin specific protease 9, X-linked (fat facets-like, Drosophila)			Symbol and Name status set to provisional	70820	PROVISIONAL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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