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Gene: Kif26b (kinesin family member 26B) Rattus norvegicus

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Symbol:

Kif26b

Name:

kinesin family member 26B

RGD ID:

1560022

Description:

Predicted to enable ATP binding activity; microtubule binding activity; and microtubule motor activity. Predicted to be involved in microtubule-based movement and system development. Predicted to act upstream of or within establishment of cell polarity; positive regulation of cell-cell adhesion; and ureteric bud invasion. Predicted to be located in cytoplasm and microtubule. Orthologous to human KIF26B (kinesin family member 26B); INTERACTS WITH 1,2-dimethylhydrazine; 2,3,7,8-tetrachlorodibenzodioxine; 2,3,7,8-Tetrachlorodibenzofuran.

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

kinesin-like protein KIF26B; LOC305012; LOC498294; RGD1560022; RGD1560572; similar to Hypothetical protein 4832420M10; similar to hypothetical protein D230039L06

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	KIF26B (kinesin family member 26B)	HGNC	EggNOG, Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, OrthoMCL, Panther, Treefam
Mus musculus (house mouse):	Kif26b (kinesin family member 26B)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Kif26b (kinesin family member 26B)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	KIF26B (kinesin family member 26B)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	KIF26B (kinesin family member 26B)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Kif26b (kinesin family member 26B)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	KIF26B (kinesin family member 26B)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	KIF26B (kinesin family member 26B)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Kif26b (kinesin family member 26B)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Alliance orthologs ³
Homo sapiens (human):	KIF26B (kinesin family member 26B)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Mus musculus (house mouse):	Kif26b (kinesin family member 26B)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	kif26ba (kinesin family member 26Ba)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Drosophila melanogaster (fruit fly):	CG14535	Alliance	DIOPT (Ensembl Compara\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Drosophila melanogaster (fruit fly):	CG14535	Alliance	DIOPT (Ensembl Compara\|OrthoFinder\|OrthoInspector\|PANTHER\|SonicParanoid)
Caenorhabditis elegans (roundworm):	vab-8	Alliance	DIOPT (Hieranoid\|OrthoFinder)
Caenorhabditis elegans (roundworm):	vab-8	Alliance	DIOPT (OrthoFinder\|PANTHER)
Xenopus tropicalis (tropical clawed frog):	kif26b	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	13	92,815,427 - 93,221,071 (+)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	13	92,815,427 - 93,215,453 (+)	Ensembl				GRCr8
mRatBN7.2	13	90,282,821 - 90,689,058 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	13	90,283,404 - 90,682,811 (+)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	13	92,788,644 - 93,188,026 (+)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	13	94,188,806 - 94,588,203 (+)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	13	91,365,835 - 91,766,117 (+)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	13	96,775,356 - 97,173,469 (-)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	13	96,775,357 - 97,173,469 (-)	Ensembl			rn6	Rnor6.0
Rnor_5.0	13	101,794,597 - 102,194,975 (-)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	13	94,184,947 - 94,606,719 (+)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	13	89,840,520 - 90,239,545 (+)	NCBI		Celera
Cytogenetic Map	13	q26	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

autosomal dominant cerebellar ataxia (ISO)

developmental and epileptic encephalopathy 54 (ISO)

gastrointestinal stromal tumor (ISO)

Neurodevelopmental Disorders (ISO)

parathyroid carcinoma (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

1,2,4-trichloro-5-(2,5-dichlorophenyl)benzene (ISO)

1,2-dichloroethane (ISO)

1,2-dimethylhydrazine (EXP)

2,2',4,4',5,5'-hexachlorobiphenyl (ISO)

2,2',5,5'-tetrachlorobiphenyl (ISO)

2,3,7,8-tetrachlorodibenzodioxine (EXP,ISO)

2,3,7,8-Tetrachlorodibenzofuran (EXP)

2,4,4'-trichlorobiphenyl (ISO)

4,4'-sulfonyldiphenol (ISO)

5-fluorouracil (ISO)

acrylamide (ISO)

aflatoxin B1 (ISO)

Aflatoxin B2 alpha (ISO)

aristolochic acid A (ISO)

arsane (ISO)

arsenic atom (ISO)

benzo[a]pyrene (ISO)

benzo[b]fluoranthene (ISO)

benzo[e]pyrene (ISO)

bisphenol A (EXP,ISO)

bisphenol F (ISO)

cadmium dichloride (ISO)

calcitriol (ISO)

carbon nanotube (ISO)

chloroprene (ISO)

chrysene (ISO)

dexamethasone (ISO)

dibenz[a,h]anthracene (ISO)

dioxygen (ISO)

endosulfan (EXP)

ethanol (ISO)

FR900359 (ISO)

furan (EXP)

genistein (EXP,ISO)

gentamycin (EXP)

hydrogen peroxide (ISO)

hydroquinone O-beta-D-glucopyranoside (ISO)

indole-3-methanol (EXP)

methapyrilene (ISO)

methoxychlor (EXP)

N-nitrosodiethylamine (EXP,ISO)

nickel atom (ISO)

O-methyleugenol (ISO)

ochratoxin A (EXP)

ozone (ISO)

paracetamol (EXP,ISO)

PCB138 (ISO)

phenobarbital (ISO)

phenylmercury acetate (ISO)

piperonyl butoxide (ISO)

silicon dioxide (ISO)

silver atom (ISO)

silver(0) (ISO)

sodium arsenite (ISO)

tetraphene (ISO)

thioacetamide (EXP)

thiram (ISO)

titanium dioxide (ISO)

trichloroethene (EXP)

triclosan (ISO)

trimellitic anhydride (ISO)

triphenyl phosphate (ISO)

triptonide (ISO)

tris(2-butoxyethyl) phosphate (ISO)

valproic acid (EXP,ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

establishment of cell polarity (IEA,ISO)

microtubule-based movement (IEA)

positive regulation of cell-cell adhesion (IEA,ISO)

system development (IEA)

ureteric bud invasion (IEA,ISO)

Cellular Component

cytoplasm (IEA)

cytoskeleton (IEA)

microtubule (IEA)

Molecular Function

ATP binding (IEA)

cytoskeletal motor activity (IEA)

microtubule binding (IEA)

microtubule motor activity (IEA)

nucleotide binding (IEA)

protein binding (ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2.	GOA pipeline	RGD automated data pipeline
3.	ClinVar Automated Import and Annotation Pipeline	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
4.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

Additional References at PubMed

PMID:8889548	PMID:14727108	PMID:15632090	PMID:20439720

Genomics

Comparative Map Data

Kif26b
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	13	92,815,427 - 93,221,071 (+)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	13	92,815,427 - 93,215,453 (+)	Ensembl				GRCr8
mRatBN7.2	13	90,282,821 - 90,689,058 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	13	90,283,404 - 90,682,811 (+)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	13	92,788,644 - 93,188,026 (+)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	13	94,188,806 - 94,588,203 (+)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	13	91,365,835 - 91,766,117 (+)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	13	96,775,356 - 97,173,469 (-)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	13	96,775,357 - 97,173,469 (-)	Ensembl			rn6	Rnor6.0
Rnor_5.0	13	101,794,597 - 102,194,975 (-)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	13	94,184,947 - 94,606,719 (+)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	13	89,840,520 - 90,239,545 (+)	NCBI		Celera
Cytogenetic Map	13	q26	NCBI

KIF26B
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	1	245,154,985 - 245,709,432 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	1	245,154,985 - 245,709,432 (+)	Ensembl			hg38	GRCh38
GRCh37	1	245,318,287 - 245,872,734 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	1	243,384,910 - 243,933,051 (+)	NCBI	Build 36	Build 36	hg18	NCBI36
Celera	1	218,607,159 - 219,157,882 (+)	NCBI		Celera
Cytogenetic Map	1	q44	NCBI
HuRef	1	215,701,421 - 216,254,032 (+)	NCBI		HuRef
CHM1_1	1	246,590,595 - 247,138,523 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	1	244,572,450 - 245,130,184 (+)	NCBI		T2T-CHM13v2.0

Kif26b
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	1	178,356,690 - 178,766,765 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	1	178,356,690 - 178,766,765 (+)	Ensembl		GRCm39 Ensembl		GRCm39
GRCm38	1	178,529,125 - 178,932,857 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	1	178,529,125 - 178,939,200 (+)	Ensembl			mm10	GRCm38
MGSCv37	1	180,459,256 - 180,862,988 (+)	NCBI	MGSCv37	MGSCv37	mm9	NCBIm37
MGSCv36	1	180,701,650 - 180,769,527 (+)	NCBI		MGSCv36	mm8
Celera	1	185,591,356 - 185,992,064 (+)	NCBI		Celera
Cytogenetic Map	1	H4	NCBI
cM Map	1	83.16	NCBI

Kif26b
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955406	8,290,046 - 8,731,226 (+)	Ensembl
ChiLan1.0	NW_004955406	8,289,774 - 8,738,131 (+)	NCBI	ChiLan1.0	ChiLan1.0

KIF26B
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	1	3,433,092 - 3,993,275 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	1	3,656,595 - 4,216,868 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	1	220,756,171 - 221,321,969 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	1	226,343,827 - 226,688,452 (+)	NCBI	PanPan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	1	226,343,821 - 226,681,669 (+)	Ensembl			panPan2	panpan1.1

KIF26B
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	7	36,087,483 - 36,529,334 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	7	36,088,050 - 36,522,653 (+)	Ensembl			canFam3	CanFam3.1
Dog10K_Boxer_Tasha	7	35,561,234 - 36,005,056 (+)	NCBI	Dog10K_Boxer_Tasha	Dog10K_Boxer_Tasha
ROS_Cfam_1.0	7	35,918,281 - 36,360,127 (+)	NCBI	ROS_Cfam_1.0	ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	7	35,918,424 - 36,354,046 (+)	Ensembl				ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	7	35,752,326 - 36,195,843 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	7	35,767,424 - 36,209,134 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	7	36,033,218 - 36,477,290 (+)	NCBI	UU_Cfam_GSD_1.0	UU_Cfam_GSD_1.0

Kif26b
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024409344	49,015,099 - 49,499,220 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936526	5,255,227 - 5,434,697 (-)	Ensembl		SpeTri2.0 Ensembl
SpeTri2.0	NW_004936526	5,250,154 - 5,434,699 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

KIF26B
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	10	18,081,754 - 18,219,848 (+)	Ensembl			susScr11	Sscrofa11.1
Sscrofa11.1	10	17,708,365 - 18,220,052 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	10	20,383,677 - 20,762,886 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

KIF26B
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	25	82,177,587 - 82,735,055 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	25	82,631,337 - 82,734,410 (+)	Ensembl		ChlSab1.1 Ensembl	chlSab2	Vervet-AGM
Vero_WHO_p1.0	NW_023666055	84,409,130 - 84,992,517 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Kif26b
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624771	13,974,912 - 14,495,991 (-)	Ensembl		HetGla_female_1.0 Ensembl	hetGla2	HetGla_female_1.0 Ensembl
HetGla 1.0	NW_004624771	13,972,394 - 14,496,647 (-)	NCBI	HetGla 1.0	HetGla 1.0	hetGla2

Variants

Variants in Kif26b
2191 total Variants

miRNA Target Status (No longer updated)

Predicted Target Of

	Summary Value
Count of predictions:	212
Count of miRNA genes:	149
Interacting mature miRNAs:	171
Transcripts:	ENSRNOT00000017784
Prediction methods:	Microtar, Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCr8)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
7207885	Glom27	Glomerulus QTL 27	3.9		kidney glomerulus integrity trait (VT:0010546)	kidney crescentic glomeruli count to kidney normal glomeruli count ratio (CMO:0002139)	13	20605871	101339738	Rat
7387280	Uae43	Urinary albumin excretion QTL 43	5.69	0.4174	urine albumin amount (VT:0002871)	urine albumin excretion rate (CMO:0000757)	13	66451204	106807694	Rat
1298066	Bp159	Blood pressure QTL 159		0.004	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	13	46088046	91088046	Rat
70181	BpQTLcluster11	Blood pressure QTL cluster 11	6.922		arterial blood pressure trait (VT:2000000)	absolute change in mean arterial blood pressure (CMO:0000533)	13	31241331	93395974	Rat
2293702	Bss34	Bone structure and strength QTL 34	4.61	0.0001	femur strength trait (VT:0010010)	femur midshaft polar moment of inertia (CMO:0001669)	13	65103704	106807694	Rat
1354621	Rf47	Renal function QTL 47	3.7		kidney renin amount (VT:0010559)	kidney renin level (CMO:0002166)	13	30395351	101056920	Rat
1354655	Bp241	Blood pressure QTL 241	3.9		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	13	56056920	101056920	Rat
4889606	Gluco63	Glucose level QTL 63	2.86	0.003	blood glucose amount (VT:0000188)	blood glucose level area under curve (AUC) (CMO:0000350)	13	80753256	106807694	Rat
8655959	Pur32	Proteinuria QTL 32	8.4		urine total protein amount (VT:0000032)	urine total protein excretion rate (CMO:0000756)	13	74023918	97213863	Rat
1641901	Alcrsp6	Alcohol response QTL 6			response to alcohol trait (VT:0010489)	duration of loss of righting reflex (CMO:0002289)	13	52362171	97362171	Rat
12879441	Bp396	Blood pressure QTL 396			arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	13	45699983	90699983	Rat
2293687	Bss26	Bone structure and strength QTL 26	4.6	0.0001	femur morphology trait (VT:0000559)	femur cross-sectional area (CMO:0001661)	13	65103704	106807694	Rat
12879475	Bp400	Blood pressure QTL 400			arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	13	61825626	106807694	Rat
1581570	Eae17	Experimental allergic encephalomyelitis QTL 17	4.1		nervous system integrity trait (VT:0010566)	experimental autoimmune encephalomyelitis incidence/prevalence measurement (CMO:0001046)	13	8897350	101631289	Rat
1354666	Bp244	Blood pressure QTL 244	4.9		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	13	1	101056920	Rat
2293341	Glom15	Glomerulus QTL 15	9.1		kidney glomerulus integrity trait (VT:0010546)	kidney sclerotic glomeruli count to total glomeruli count ratio (CMO:0001269)	13	74862117	101339893	Rat

Markers in Region

D13Rat54

Rat Assembly	Chr	Position (strand)	Source	JBrowse
GRCr8	13	93,135,505 - 93,135,614 (+)	Marker Load Pipeline
Rnor_5.0	13	101,878,983 - 101,879,092	NCBI	Rnor5.0
Rnor_5.0	13	101,878,982 - 101,879,093	NCBI	Rnor5.0
RGSC_v3.4	13	94,524,904 - 94,525,014	RGD	RGSC3.4
RGSC_v3.4	13	94,524,905 - 94,525,013	UniSTS	RGSC3.4
Celera	13	90,160,324 - 90,160,432	UniSTS
RGSC_v3.1	13	94,713,840 - 94,713,950	RGD
RH 3.4 Map	13	611.0	RGD
RH 3.4 Map	13	611.0	UniSTS
RH 2.0 Map	13	658.3	RGD
FHH x ACI Map	13	46.13	RGD
Cytogenetic Map	13	q26	UniSTS

D13Mco16

Rat Assembly	Chr	Position (strand)	Source	JBrowse
GRCr8	13	93,094,196 - 93,094,392 (+)	Marker Load Pipeline
mRatBN7.2	13	90,562,204 - 90,562,400 (-)	MAPPER	mRatBN7.2
Rnor_6.0	13	96,895,515 - 96,895,710	NCBI	Rnor6.0
Rnor_5.0	13	101,919,119 - 101,919,314	UniSTS	Rnor5.0
RGSC_v3.4	13	94,483,926 - 94,484,122	RGD	RGSC3.4
RGSC_v3.4	13	94,483,927 - 94,484,122	UniSTS	RGSC3.4
Celera	13	90,118,817 - 90,119,012	UniSTS
RGSC_v3.1	13	94,672,862 - 94,673,058	RGD
Cytogenetic Map	13	q26	UniSTS

BE099345

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	13	90,449,542 - 90,449,740 (-)	MAPPER	mRatBN7.2
Rnor_6.0	13	97,007,633 - 97,007,830	NCBI	Rnor6.0
Rnor_5.0	13	102,029,855 - 102,030,052	UniSTS	Rnor5.0
RGSC_v3.4	13	94,354,956 - 94,355,153	UniSTS	RGSC3.4
Celera	13	90,006,495 - 90,006,692	UniSTS
RH 3.4 Map	13	610.9	UniSTS
Cytogenetic Map	13	q26	UniSTS

BF403417

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	13	90,348,063 - 90,348,224 (-)	MAPPER	mRatBN7.2
Rnor_6.0	13	97,109,179 - 97,109,339	NCBI	Rnor6.0
Rnor_5.0	13	102,131,114 - 102,131,274	UniSTS	Rnor5.0
RGSC_v3.4	13	94,251,051 - 94,251,211	UniSTS	RGSC3.4
Celera	13	89,905,100 - 89,905,260	UniSTS
RH 3.4 Map	13	612.6	UniSTS
Cytogenetic Map	13	q26	UniSTS

AU048808

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	13	90,322,013 - 90,322,178 (-)	MAPPER	mRatBN7.2
Rnor_6.0	13	97,135,207 - 97,135,371	NCBI	Rnor6.0
Rnor_5.0	13	102,157,142 - 102,157,306	UniSTS	Rnor5.0
RGSC_v3.4	13	94,224,933 - 94,225,097	UniSTS	RGSC3.4
Celera	13	89,879,147 - 89,879,301	UniSTS
Cytogenetic Map	13	q26	UniSTS

AU049220

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	13	90,675,850 - 90,675,984 (-)	MAPPER	mRatBN7.2
Rnor_6.0	13	96,782,184 - 96,782,317	NCBI	Rnor6.0
Rnor_5.0	13	101,807,670 - 101,807,803	UniSTS	Rnor5.0
RGSC_v3.4	13	94,599,758 - 94,599,891	UniSTS	RGSC3.4
Celera	13	90,232,584 - 90,232,717	UniSTS
Cytogenetic Map	13	q26	UniSTS

ha2905

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	13	90,481,858 - 90,482,630 (-)	MAPPER	mRatBN7.2
Rnor_6.0	13	96,974,679 - 96,975,450	NCBI	Rnor6.0
Rnor_5.0	13	101,997,340 - 101,998,111	UniSTS	Rnor5.0
Cytogenetic Map	13	q26	UniSTS

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	sensory system	visual system
16	12	64	162	89	88	57	25	57	6	282	122	11	141	79	92	31	17	17

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001109079	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039090818	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063272386	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063272387	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063272388	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	BF408210	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH473985	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000013	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000017784 ⟹ ENSRNOP00000017784

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	13	92,815,427 - 93,215,453 (+)	Ensembl
mRatBN7.2 Ensembl	13	90,283,404 - 90,682,811 (+)	Ensembl
Rnor_6.0 Ensembl	13	96,775,357 - 97,173,469 (-)	Ensembl

RefSeq Acc Id:

NM_001109079 ⟹ NP_001102549

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	13	92,815,427 - 93,214,826 (+)	NCBI
mRatBN7.2	13	90,283,404 - 90,682,812 (+)	NCBI
Rnor_6.0	13	96,775,356 - 97,173,469 (-)	NCBI
Rnor_5.0	13	101,794,597 - 102,194,975 (-)	NCBI
RGSC_v3.4	13	94,184,947 - 94,606,719 (+)	RGD
Celera	13	89,840,520 - 90,239,545 (+)	RGD

Sequence:

show sequence

AGTTAGCGAGCTCGGGGAAGGAGGCAAGTTCCCACCGCCGGCTCGGCTCGGAGAGGGCTCGCCC
ACCTTCCCTGCAGCCGCCCTGCGTCCTCGCCGCCTTCTCGTCCTCCTCCTGTCGGCCCCGCTAA
AGGAGAACGCGCCGGCCGGGCGGAGGAAAATGCTAGCGATCTGGATGTGACCGCGAAGAGAGGA
CGCGTGGCTGGAGGAGGCAGAGGGATGAGAAGACCCATTATTTGAGAACCACCAGCCGCTCCAA
CCCTTCCTGCAAATTGGTGCTATCACTTCTGGGGTCCATTTGCTTTTATTCTTCCCAAGCCCCC
ATTAAGAAACCTTGACTTGACGACCAACCCCTACCACGAGGGGGGACGCCTTCTGGGTTGGCAG
ACCTTTTGGATGTAGCCTTGTGGGAGCATTTAGACCCTTTCCTCTGGAAGAGCCACCATGAATT
CGGTAGCTGGAAATAAAGAGAGGCTCGCGGTCTCCACCAGGGGCAAGAAATACGGGGTGAATGA
AATGTGCTCGCCCACCAAGCCCTCTGCGCCCTTCTCTCCTGAGAGCTGGTACCGCAAGGCTTAC
GAGGAGTCGCGCGCCGGGAGCCGACCCACCCCGGAGGGAGCAGGTTCTGCGCTGGGCTCTTCGG
GTACTCCGTCCCCGGGTTCGGGCACTTCGTCCCCGAGCTCCTTCACCGGCTCTCCAGGACCGGC
GTCTCCGGGCATCGGTACCAGCTCGCCGGGCTCCCTGGGCGGCTCGCCGGGCTTCGGCACCGGC
TCCCCTGGCTCGGGCAGCGGCGGCGGCTCCTCCCCCGGCTCCGACCGGGGCGTCTGGTGCGAGA
ACTGTAACGCCCGCTTGGTGGAGCTGAAGAGGCAGGCTCTCAAGCTGCTGCTGCCGGGACCCCT
CCCGGGCAAGGACCCCGCTTTCTCTGCTGTGATTCATGACAAACTCCAGGTCCCTAATACCATC
AGGAAGTCGTGGAATGACCGAGACAACCGCTGTGACATTTGTGCCACACACCTGAACCAGCTGA
AACAGGAAGCCATCCAAATGGTGCTGACCTTGGAGCAGGCAGCTGGCAGTGAGCACTATGATGC
CTCTCCGGGCTCACCCCCTGCCATCAACAGCATTCCCGCGCTGGTGGGGTCCCGGCACATGGGT
GGGCTCCAGCAACCCAGGGAGTGGGCCTTTGTGCCTGCCCCCTATGCCACCTCTACCTACACAG
GCCTTGTCAACAAACACAGTGGCAAACCCAACAGCCTTGGGGTCAGCAACGGAGCAGAAAAGAA
GAGTGGATCCCCAACCCACCAGGCCAAGGTCAGCCTCCAGATGGCCACCAGTCCCAGCAATGGA
AACACCCTTAACTCGGTGGCCATTCAGGCTCATCAATATCTGGACGGAACCTGGTCCCTTTCAA
GAACCAATGGGGTTACCCTGTACCCCTACCAGATCTCCCAGCTGATGACAGAGACCGGCCGTGA
GGGACTGACAGAGTCAGCGCTCAACCGTTACAATGCTGACAAGCCTGCAGCCAGCAGTGTCCCA
GCCCCACAGGGTTCCTGTGTGGCCAGTGAGACTTCCACAGGGACCTCGGTGGCCGCTTCCTTCT
TCGCACGAGCTGCCCAGAAGTTAAATCTGTCATCTAAGAAGAAGAAACACCGGCCGTCGACCCC
GTCTGTTGCGGAGGCTCCCCTCTTTGCCACCAGCTTCAGTGGGATCCTGCAGGCCTCACCTCCC
CCGGCCCCGCCCTGTCTCCTGAGGGCTGTCAACAAGGTGAAGGACACTCCTGGCATGGGCAAGG
TGAAAGTCATGCTGCGTATCTGTTCCGCGTCGGCCCGAGACACCTCAGAATCCAGCTCTTTCCT
GAAGGTGGATCCACGGAAGAAGCAGATCACCTTGTACGACCCCCTGACCTGTGGAGGTCACAAT
GCCTTCCAAAAAAGAAGCAGCCAGGTCCCTCCCAAGATGTTTGCCTTCGATGCGGTTTTCCCAC
AAGATGCTTCTCAGGCTGAAGTTTGTGCTGGAACCGTGGCCGAAGTCATTCAGTCTGTGGTGAA
CGGGGCAGATGGCTGTGTGTTCTGTTTTGGCCATGCCAAGCTGGGGAAATCCTACACCATGATC
GGAAGGGATGACTCTATGCAGAACCTGGGAATTATTCCATGTGCTATTTCTTGGCTGTTCAAGC
TCATCAATGAACGCAAAGAAAAGACAGGGGCCCGATTCTCAGTCCGGATCTCAGCCGTTGAGGT
GTGGGGGAAAGAGGAGAACCTTCGAGACCTGCTATCTGAAGTGGCCACAGGCAGCCTACAGGAC
GGGCAGTCCCCGGGCGTGTACCTCTGCGAGGACCCCATCTGTGGCACACAGCTGCAGAACCAGA
GTGAGCTGCGAGCCCCAACCGCAGAGAAAGCTGCCTTTTTCCTGGACGCTGCCATTGCCTCGAG
GCGAAGCAACCAACAGGATTGCGACGAGGATGACCACCGCAACTCCCACATGCTCTTCACCCTG
CACATCTACCAGTACCGGATGGAGAAGAGCGGGAAGGGCGGAATGTCTGGGGGTCGCAGCCGAC
TGCATCTCATCGACCTCGGCAGTTGTGTGAAAGCTCTCAGCAAAAACAGAGAAGGAGGCTCGGG
GCTGTGCCTCTCACTGTCTGCCCTGGGCAACGTCATCCTGGCTTTGGTCAATGGGAGCAAACAC
ATCCCATACAAGGAGAGCAAGCTCACCATGCTTCTGAGGGAGTCTCTGGGGAACGTGAACTGTC
GCACCACCATGATCGCACACATCTCGGCCGCGGCCGGCAGCTACGCGGAGACCCTGTCCACCAT
CCAGATCGCATCAAGAGTCTTAAGGATGAAGAAGAAGAAGACTAAGTACACATCCAGCTCCTCT
GGGGGAGAAAGCTCCTGCGAGGAGGGCAGGATGCGCAGGCCCACCCAGCTGAGACCCTTCCATG
CCCGGGCTCCAGTGGATCCAGAATTCCCCCTCGCCCCACTGTCCAGTGATCCCGACTACTCCTC
CAGCAGTGAGCAGTCCTGTGACACCGTCATCTACATCGGGCCCAACGGCACAGCCCTGTCCGAC
AAGGAACTTACTGACAACGAGGGCCCCCCAGACTTTGTGCCCATTGTGCCGGCCCTACAGAAGA
CCAGAGGTGACAGCCGGCCCGGGGAGGCAGCAGAGTCTGCGGCCAGCAAGTCAGAAAGGGACTG
CCTGAAGTGCAATACGTTTGCCGAGCTACAGGAGAGACTGGATTGCATAGACGGCAGTGAAGAA
CCCAACCGATTTCCCTTCGAAGAGCTGCCCGTTCAGTTTGGGCCAGAGCAGGCTGGCAGATGTA
CTTCTTTAAGCCAAGCAGCGGGCCCAGATACACTCTCTGAGTCTGATAAGGAAGATAACGGGTC
AGACAATGGCCAGTTGACCGAGAGGGAAGGCTCAGAGCTTCCAACCTCCAAGGTGCAGCCGATT
CGGTCGCCTGGGCCTACAGTGACAGGCAGCAGCAGCCCCAGTCCAGCCTCACCACGGAGCATCC
CAGGCAGCAGTAGCCAGCACAGTACCTCCCAGCTCACACAGAGCCCCAGTCTCCAGAGCAGCCG
GGAGAGTCTGGACTCGTGCGGCTTTGTGGAGGGCAAGCCCAGACCCATGGGCTCCCCGAGGTTA
GGCATTGCCAGTCTATCCAAGACCTCAGAGTACAAACCTCCCAGCTCTCCCTCTCAGAGGTGCA
AAGTCTACACCCAGAAGGGGGTCCTGCCCTCCTCTGCCCCACCACCTTCCCTGAGCAAGGACTC
TGGCATGGTCTCCAGCGAGTCCTTGCTTCAGCCTGATGTGCGTACTCCCCCGGTTGGAATGAGT
CCCCAGGTTGTGAAGAAATCCATGTCCGCTGGGAGTGAAGGGTTTCCCGAACCCCTAGTTGGAG
GAGAGCACCAGGGAGGCCCTCCTGCAGACTCAAAGAAGGAGATTCTGAGTACCACCATGGTGAC
CGTGCAACAGCCTCTGGAGCTGAACGGAGAGGACGAGCTGGTCTTCACACTCGTGGAGGAGCTG
ACCATCAGCGGGGTACTCGACAGCGGGCGCCCCACCAGCATCGTCAGCTTCAACAGCGACTGCT
CCGTGCAGGCCCTGGCCTCAGGCTCCCGGCCCGTCAGCATCATCAGCAGCATCAGTGAGGATCT
GGACTGCTACTCCAGCATGGCCCCCGTCTCGGAGGTGAGCATCACACAGTTCCTGCCGCTCCCC
AAGCTGGGCCTGGAGGAGAAGGCTCAGGAAGCAGGTAGCCGGCGTTCCTCCATCAGCTCGTGGC
TGAGCGAGATGAGCGCGGGCAGTGACGGAGAGCAGTCGTGCCACAGCTTCATAGCACAGACGTG
CTTCGGGCACGGGGAAGCCATGGCTGAACCGCCCCCAGCCTCTGAGTTTGTCAGAGGCATCCAG
AACGCGGCGCCGGCGGCAGCGACAGCGGCAGTGGTGTGCAGAGAGAAGACCGAGGTGGGCCCTG
ACAACCTGCTCATCCTGTCTGAGATGGGGGAAGAGTCTGTTAACCAAGCCACTCCCATCAAAGG
CTGCAAAATCTCTACCGTGGGCAAGGCCATGGTCACCATCTCTAACACTGCCAGTCTGAGCAGC
TGCGAGGGGTATATCCCCATGAAGACCAACATCACGGTTTACCCCTGCATTGCCATGAGCCCCA
GAAACGTGCAAGAGCCTGAGCCCTCCACTGCCGCTCCAAAGGCAAGCCCCAAAACATCTCAGTT
CCAGGAGAGCAAGGAAACCAGTACAAGGAGGGAGATGAAATTTGAGGATCCCTGGCTTAAACGA
GAAGAGGAAGTGAAAAGGGAGAACACTTACTCAAGCGAGGAAGGGGTGAAGTGTGAGACAAGCT
CCCCGAAGACTGAAGGTAAGTCAGAGCAAGAACTGGATAGCAGGCCTGGCTCAGGCAACAGGCT
AAGCAGCAGCAGCTTGGAGGCAGCCACCTTTCAAGTGACCGACAACATTAGGAGGGTTGTGGAT
GGCTGTGAGATGGCCCTGCCTGGCTCGGTGGCCCAGAGTCCCCTCCATGCCAACAGAAACCTAA
AGTCAAGCAGCCTCCCAAGGGCATTTCAGAAAGCCGACAGGCACGAGGAGCTGGACAGCTTCTA
CCATTGCTTGGCAGACAGCAATGGCTTCAGTGCTGTCCCGGGCATCCAGTCCTCGAAGACAACC
CTGGAGAGGAAAGTAGCTTCACCCAAGCATTGTGTCCTGGCAAGACCCAAAGGGACCCCGCCTC
TGCCTCCTGTCCGCAAGTCTAGCTTGGACCAGAAGAACAGGGCCAGCCCTCAACACAGTGCTGG
TGGCAGCAGCACCAGCAGCCCCCTGAACCAGCCAGCTACCTTCTTGGCTTGCTTCCCTGAGGAG
TCCAACAGCAAGACTAAGGATGCCAGTAGCAGCAGTAAGCTCTTCAGCGCCAAGCTGGAGCAGC
TGGCCAGCAGAACCAACTCTCTTGGCAGGACAACAGTCAGCCACTATGAATGCTTGTCGTTGGA
GAGGGCCGAAAGCCTGTCGTCCGTAAGCTCCCGCATGCATGCCAGCAAAGACAGTACCATGCCC
CGCACTGGCAGGAGCCTGGGTCGCAGCACAGGAGCCTCGCCACCCAGCTGTGGCATCACCCAGT
CTGCAGGGGCCTCTCCCAAAGCCAGCCAGTCTAAGATCTCAGCGGTGAGCAAACTCCTGCTGGC
CAGCCCTAAATCCCGCAGCAGCCTGTCCACCTCGACCACCAAAACCCTCAGCTTCTCCACCAAG
TCCCTGCCGCAGTCTGTGGGCCAGAGCTCCAACCTACCGCCCAGCGGGAAACACATGTCCTGGT
CCACGCAGTCGCTCAGCAGGAACCGGGGCTCTGGGCTGGCTTCCAAACTGCCTTTAAGAGCCGT
CAATGGGCGCATCTCGGAACTGCTCCAGGGCAGTGCGGGCCCGAGGGGTGCACAGCTTCGGGCA
GAGGCGGAGGAGCGCAGTGGGGCCCCCACGGAGGAAAAGCCCGCAGCCGCCCACCTGCTGCCCT
CGCCCTACAGCAAGATCACCCCTCCGAGGAAGCCGCACCGCTGCAGCAGTGGGCACGGTAGTGA
TAACAGCAGCGTCCTGAGCGGGGAGCTGCCCCCTGCCATGGGGAAGACTGCCCTGTTCTACCAC
AGCGGCGGCAGCAGTGGCTATGAGAGCATGATGAGAGACAGCGAGGCCACCGGCAGCGCATCCT
CGGCCCAGGACTCCATGAGCGAGAACAGCAGCTCCGTGGGAGGGAGGTGCAGGAGCCTCAAGAC
CCCAAAGAAGCGGTCCAATTCAGGTTCCCAGAGACGGAGGCTCATTCCAGCATTGTCTCTTGAT
ACCCCCTCGCCTGTGAGAAAAACAGCCAGCAGCACAGGGGTCCGCTGGGTGGACGGCCCCTTGA
GGAGCACCCAGAGGAGCCTTGGGGAACCATTTGAGATCAAAGTCTATGAGATTGATGACGTTGA
GCGTCTACAGCGACGTCGGGGAGCTACCAGCAAGGAGGTCATGTGCTTCAATGCCAAGCTGAAA
ATCCTAGAACATCGGCAGCAGAGAATCGCTGAGGTCCGAGCCAAGTACGAGTGGCTGATGAAAG
AGCTGGAGGCGACCAAACAGTACCTGATGCTGGACCCCAACAAGTGGCTTCGTGAATTTGACTT
GGAACAGGTCCTGCAGCTGGATTCCCTGGAGTACCTAGAGGCACTGGAGGGAGTGACAGAGCGC
CTAGAGAGCCGTGTCAACTTCTGCAAGGCCCATCTCATGATGATCACCTGCTTTGACATCACCT
CCAGGCGTCGGTAAGGACCGATGGGCTCCGAGCCATCAGTCCCCCTGTCCCCAGGACTTCAGCA
GGACACCGCCCTCCCAGGCCCCTCTGTGCTGGCAACACTCAAGACAACAGGACGAGGATGAAGG
TTGGTAGCAAGTCTGGAGTGAGCGTGGAGCGAAAGGCGATGTTTCCTTTGTTTGCTGTAGGAAA
GGAAGGTACAGACACCAACATGTGGAAGGAGAAAATGATGGGAAGCCCCGTGGGACTGAGAAAG
CACTTTGAGGAACCTTGAAGAACTCTGTACATAGGACCGCTAGCAAAGAGACTCTTACCTTGCG
GCTGTGAGAAAGGGGAGGGTGACGTGGGATTACCATGGAAAGCGAAACACCAACAAGACGACCC
AGAATGATGGATTAAGTGCCTTGCAAATCTTTATGATTATCCAAACATTTGTGTTCGTACTTTC
TTGTGTCCAGATGGTGCTAGTCAAGAAGAAAATCAACAAAACAGAAAACTCAACCCAGTTTTTG
AAATGTATCTACGGCTTGTTTTCTCATGTTTCTGATTTGCTGTTTTGTTTCCGAGAAGTTGTGT
TTGTAGTGATGTCTCCTAATCCGTATTGCAGCTGAATAAATGTTACCTGTCTTTCATGGCTAAA
AAAAAAAAAAAAAAA

hide sequence

RefSeq Acc Id:

XM_039090818 ⟹ XP_038946746

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	13	93,079,430 - 93,221,071 (+)	NCBI
mRatBN7.2	13	90,547,426 - 90,689,058 (+)	NCBI

RefSeq Acc Id:

XM_063272386 ⟹ XP_063128456

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	13	93,021,536 - 93,221,071 (+)	NCBI

RefSeq Acc Id:

XM_063272387 ⟹ XP_063128457

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	13	93,037,257 - 93,221,071 (+)	NCBI

RefSeq Acc Id:

XM_063272388 ⟹ XP_063128458

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	13	93,040,226 - 93,221,071 (+)	NCBI

Protein Sequences


Protein RefSeqs	NP_001102549	(Get FASTA)	NCBI Sequence Viewer
	XP_038946746	(Get FASTA)	NCBI Sequence Viewer
	XP_063128456	(Get FASTA)	NCBI Sequence Viewer
	XP_063128457	(Get FASTA)	NCBI Sequence Viewer
	XP_063128458	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	EDL94806	(Get FASTA)	NCBI Sequence Viewer
	EDL94807	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000017784
	ENSRNOP00000017784.6

RefSeq Acc Id:

NP_001102549 ⟸ NM_001109079

- UniProtKB:

D4ADC4 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MNSVAGNKERLAVSTRGKKYGVNEMCSPTKPSAPFSPESWYRKAYEESRAGSRPTPEGAGSALG
SSGTPSPGSGTSSPSSFTGSPGPASPGIGTSSPGSLGGSPGFGTGSPGSGSGGGSSPGSDRGVW
CENCNARLVELKRQALKLLLPGPLPGKDPAFSAVIHDKLQVPNTIRKSWNDRDNRCDICATHLN
QLKQEAIQMVLTLEQAAGSEHYDASPGSPPAINSIPALVGSRHMGGLQQPREWAFVPAPYATST
YTGLVNKHSGKPNSLGVSNGAEKKSGSPTHQAKVSLQMATSPSNGNTLNSVAIQAHQYLDGTWS
LSRTNGVTLYPYQISQLMTETGREGLTESALNRYNADKPAASSVPAPQGSCVASETSTGTSVAA
SFFARAAQKLNLSSKKKKHRPSTPSVAEAPLFATSFSGILQASPPPAPPCLLRAVNKVKDTPGM
GKVKVMLRICSASARDTSESSSFLKVDPRKKQITLYDPLTCGGHNAFQKRSSQVPPKMFAFDAV
FPQDASQAEVCAGTVAEVIQSVVNGADGCVFCFGHAKLGKSYTMIGRDDSMQNLGIIPCAISWL
FKLINERKEKTGARFSVRISAVEVWGKEENLRDLLSEVATGSLQDGQSPGVYLCEDPICGTQLQ
NQSELRAPTAEKAAFFLDAAIASRRSNQQDCDEDDHRNSHMLFTLHIYQYRMEKSGKGGMSGGR
SRLHLIDLGSCVKALSKNREGGSGLCLSLSALGNVILALVNGSKHIPYKESKLTMLLRESLGNV
NCRTTMIAHISAAAGSYAETLSTIQIASRVLRMKKKKTKYTSSSSGGESSCEEGRMRRPTQLRP
FHARAPVDPEFPLAPLSSDPDYSSSSEQSCDTVIYIGPNGTALSDKELTDNEGPPDFVPIVPAL
QKTRGDSRPGEAAESAASKSERDCLKCNTFAELQERLDCIDGSEEPNRFPFEELPVQFGPEQAG
RCTSLSQAAGPDTLSESDKEDNGSDNGQLTEREGSELPTSKVQPIRSPGPTVTGSSSPSPASPR
SIPGSSSQHSTSQLTQSPSLQSSRESLDSCGFVEGKPRPMGSPRLGIASLSKTSEYKPPSSPSQ
RCKVYTQKGVLPSSAPPPSLSKDSGMVSSESLLQPDVRTPPVGMSPQVVKKSMSAGSEGFPEPL
VGGEHQGGPPADSKKEILSTTMVTVQQPLELNGEDELVFTLVEELTISGVLDSGRPTSIVSFNS
DCSVQALASGSRPVSIISSISEDLDCYSSMAPVSEVSITQFLPLPKLGLEEKAQEAGSRRSSIS
SWLSEMSAGSDGEQSCHSFIAQTCFGHGEAMAEPPPASEFVRGIQNAAPAAATAAVVCREKTEV
GPDNLLILSEMGEESVNQATPIKGCKISTVGKAMVTISNTASLSSCEGYIPMKTNITVYPCIAM
SPRNVQEPEPSTAAPKASPKTSQFQESKETSTRREMKFEDPWLKREEEVKRENTYSSEEGVKCE
TSSPKTEGKSEQELDSRPGSGNRLSSSSLEAATFQVTDNIRRVVDGCEMALPGSVAQSPLHANR
NLKSSSLPRAFQKADRHEELDSFYHCLADSNGFSAVPGIQSSKTTLERKVASPKHCVLARPKGT
PPLPPVRKSSLDQKNRASPQHSAGGSSTSSPLNQPATFLACFPEESNSKTKDASSSSKLFSAKL
EQLASRTNSLGRTTVSHYECLSLERAESLSSVSSRMHASKDSTMPRTGRSLGRSTGASPPSCGI
TQSAGASPKASQSKISAVSKLLLASPKSRSSLSTSTTKTLSFSTKSLPQSVGQSSNLPPSGKHM
SWSTQSLSRNRGSGLASKLPLRAVNGRISELLQGSAGPRGAQLRAEAEERSGAPTEEKPAAAHL
LPSPYSKITPPRKPHRCSSGHGSDNSSVLSGELPPAMGKTALFYHSGGSSGYESMMRDSEATGS
ASSAQDSMSENSSSVGGRCRSLKTPKKRSNSGSQRRRLIPALSLDTPSPVRKTASSTGVRWVDG
PLRSTQRSLGEPFEIKVYEIDDVERLQRRRGATSKEVMCFNAKLKILEHRQQRIAEVRAKYEWL
MKELEATKQYLMLDPNKWLREFDLEQVLQLDSLEYLEALEGVTERLESRVNFCKAHLMMITCFD
ITSRRR

hide sequence

Ensembl Acc Id:

ENSRNOP00000017784 ⟸ ENSRNOT00000017784

RefSeq Acc Id:	XP_038946746 ⟸ XM_039090818
- Peptide Label:	isoform X3
- UniProtKB:	A6JGF1 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063128456 ⟸ XM_063272386
- Peptide Label:	isoform X1
- UniProtKB:	A6JGF1 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063128457 ⟸ XM_063272387
- Peptide Label:	isoform X2
- UniProtKB:	A6JGF1 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063128458 ⟸ XM_063272388
- Peptide Label:	isoform X2
- UniProtKB:	A6JGF1 (UniProtKB/TrEMBL)

Protein Domains

Kinesin motor

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-D4ADC4-F1-model_v2	AlphaFold	D4ADC4	1-2118	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Promoters

RGD ID:

13699051

Promoter ID:

EPDNEW_R9576

Type:

single initiation site

Name:

Kif26b_1

Description:

kinesin family member 26B

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0	13	97,173,469 - 97,173,529	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1560022	AgrOrtholog
BioCyc Gene	G2FUF-17169	BioCyc
Ensembl Genes	ENSRNOG00000028624	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSRNOT00000017784	ENTREZGENE
	ENSRNOT00000017784.7	UniProtKB/TrEMBL
Gene3D-CATH	3.40.850.10	UniProtKB/TrEMBL
InterPro	Kinesin-like_fam	UniProtKB/TrEMBL
	Kinesin_motor_dom	UniProtKB/TrEMBL
	Kinesin_motor_dom_sf	UniProtKB/TrEMBL
	P-loop_NTPase	UniProtKB/TrEMBL
KEGG Report	rno:305012	UniProtKB/TrEMBL
NCBI Gene	305012	ENTREZGENE
PANTHER	KINESIN-LIKE PROTEIN KIF26B	UniProtKB/TrEMBL
	UNCHARACTERIZED	UniProtKB/TrEMBL
Pfam	HTH_KIF26A_B_1st	UniProtKB/TrEMBL
	Kinesin	UniProtKB/TrEMBL
PhenoGen	Kif26b	PhenoGen
PRINTS	KINESINHEAVY	UniProtKB/TrEMBL
PROSITE	KINESIN_MOTOR_DOMAIN2	UniProtKB/TrEMBL
RatGTEx	ENSRNOG00000028624	RatGTEx
SMART	KISc	UniProtKB/TrEMBL
Superfamily-SCOP	SSF52540	UniProtKB/TrEMBL
UniProt	A6JGF1	ENTREZGENE, UniProtKB/TrEMBL
	D4ADC4	ENTREZGENE, UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2009-06-15	Kif26b	kinesin family member 26B	RGD1560572	similar to hypothetical protein D230039L06	Data merged from RGD:1560572	1643240	APPROVED
2009-06-08	Kif26b	kinesin family member 26B	RGD1560572	similar to hypothetical protein D230039L06	Data merged from RGD:1560572	737654	APPROVED
2008-09-16	Kif26b	kinesin family member 26B	RGD1560022	similar to Hypothetical protein 4832420M10	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2008-04-30	RGD1560572	similar to hypothetical protein D230039L06	RGD1560572_predicted	similar to hypothetical protein D230039L06 (predicted)	'predicted' is removed	2292626	APPROVED
2008-04-30	RGD1560022	similar to Hypothetical protein 4832420M10	RGD1560022_predicted	similar to Hypothetical protein 4832420M10 (predicted)	'predicted' is removed	2292626	APPROVED
2006-03-07	RGD1560022_predicted	similar to Hypothetical protein 4832420M10 (predicted)	LOC305012	similar to Hypothetical protein 4832420M10	Symbol and Name status set to approved	1299863	APPROVED
2006-03-07	RGD1560572_predicted	similar to hypothetical protein D230039L06 (predicted)	LOC498294	similar to hypothetical protein D230039L06	Symbol and Name status set to approved	1299863	APPROVED
2006-02-09	LOC498294	similar to hypothetical protein D230039L06			Symbol and Name status set to provisional	70820	PROVISIONAL
2006-02-09	LOC305012	similar to Hypothetical protein 4832420M10			Symbol and Name status set to provisional	70820	PROVISIONAL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - ClinVar