Rab32 (RAB32, member RAS oncogene family)

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Gene: Rab32 (RAB32, member RAS oncogene family) Mus musculus

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Symbol:

Rab32

Name:

RAB32, member RAS oncogene family

RGD ID:

1558536

MGI Page

MGI

Description:

Predicted to enable several functions, including AP-1 adaptor complex binding activity; AP-3 adaptor complex binding activity; and BLOC-2 complex binding activity. Predicted to be involved in several processes, including endosome to melanosome transport; melanosome assembly; and phagosome maturation. Located in melanosome. Is expressed in duodenum; ileum; metanephros; prostate gland; and testis. Orthologous to human RAB32 (RAB32, member RAS oncogene family).

Type:

protein-coding

RefSeq Status:

PROVISIONAL

Previously known as:

2810011A17Rik; AU022057; ras-related protein Rab-32

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	RAB32 (RAB32, member RAS oncogene family)	HGNC	EggNOG, Ensembl, HGNC, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, OrthoMCL, Panther, PhylomeDB, Treefam
Rattus norvegicus (Norway rat):	Rab32 (RAB32, member RAS oncogene family)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Rab32 (RAB32, member RAS oncogene family)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	RAB32 (RAB32, member RAS oncogene family)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	RAB32 (RAB32, member RAS oncogene family)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Rab32 (RAB32, member RAS oncogene family)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	RAB32 (RAB32, member RAS oncogene family)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	RAB32 (RAB32, member RAS oncogene family)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Rab32 (RAB32, member RAS oncogene family)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Other homologs ²
Homo sapiens (human):	RAB38 (RAB38, member RAS oncogene family)	HGNC	OrthoDB
Alliance orthologs ³
Homo sapiens (human):	RAB32 (RAB32, member RAS oncogene family)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Rattus norvegicus (Norway rat):	Rab32 (RAB32, member RAS oncogene family)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	rab32b (RAB32b, member RAS oncogene family)	Alliance	DIOPT (Ensembl Compara\|OrthoFinder\|PANTHER\|PhylomeDB\|ZFIN)
Danio rerio (zebrafish):	rab32a (RAB32a, member RAS oncogene family)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid\|ZFIN)
Caenorhabditis elegans (roundworm):	glo-1	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoInspector\|SonicParanoid)
Drosophila melanogaster (fruit fly):	Rab32	Alliance	DIOPT (Ensembl Compara\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	rab32	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)

Latest Assembly:

GRCm39 - Mouse Genome Assembly GRCm39

Position:

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	10	10,420,783 - 10,433,951 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	10	10,420,746 - 10,434,009 (-)	Ensembl		GRCm39 Ensembl
GRCm38	10	10,545,039 - 10,558,207 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	10	10,545,002 - 10,558,265 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	10	10,264,837 - 10,278,005 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	10	10,235,229 - 10,248,397 (-)	NCBI		MGSCv36	mm8
Celera	10	10,440,276 - 10,453,408 (-)	NCBI		Celera
Cytogenetic Map	10	A1	NCBI
cM Map	10	3.44	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

allergic contact dermatitis (ISO)

Experimental Liver Cirrhosis (ISO)

fragile X syndrome (ISO)

human immunodeficiency virus infectious disease (ISO)

leprosy (ISO)

Parkinson's disease (ISO)

Parkinson's Disease 26 (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

1,1-dichloroethene (EXP)

1,2-dimethylhydrazine (EXP,ISO)

1-benzylpiperazine (ISO)

1-chloro-2,4-dinitrobenzene (ISO)

1-naphthyl isothiocyanate (ISO)

17beta-estradiol (ISO)

17beta-estradiol 3-benzoate (ISO)

2,3,7,8-tetrachlorodibenzodioxine (EXP,ISO)

2,4-dibromophenyl 2,4,5-tribromophenyl ether (EXP)

2-amino-2-deoxy-D-glucopyranose (EXP)

2-hydroxypropanoic acid (ISO)

4,4'-diaminodiphenylmethane (ISO)

4,4'-sulfonyldiphenol (ISO)

4-(ethoxymethylene)-2-phenyloxazol-5-one (ISO)

4-hydroxyphenyl retinamide (EXP)

acetamide (ISO)

acrylamide (ISO)

aflatoxin B1 (ISO)

aldehydo-D-glucosamine (EXP)

all-trans-retinoic acid (ISO)

aristolochic acid A (ISO)

arsenite(3-) (ISO)

atrazine (ISO)

benzo[a]pyrene (ISO)

beta-D-glucosamine (EXP)

bis(2-ethylhexyl) phthalate (ISO)

bisphenol A (EXP,ISO)

cadmium atom (ISO)

cadmium dichloride (ISO)

carbon nanotube (EXP)

chlorpyrifos (EXP)

cisplatin (ISO)

cobalt dichloride (ISO)

copper(II) sulfate (ISO)

coumestrol (ISO)

crocidolite asbestos (ISO)

Cuprizon (ISO)

cyclosporin A (ISO)

dibutyl phthalate (ISO)

doxorubicin (ISO)

endosulfan (ISO)

Enterolactone (ISO)

fluvastatin (ISO)

folic acid (EXP)

FR900359 (ISO)

fragrance (ISO)

furan (ISO)

hydrogen peroxide (ISO)

ivermectin (ISO)

leflunomide (ISO)

LY294002 (ISO)

methylmercury chloride (ISO)

N-methyl-4-phenylpyridinium (ISO)

N-nitrosodimethylamine (ISO)

nickel atom (EXP)

nickel sulfate (ISO)

ozone (EXP)

paracetamol (EXP,ISO)

phenobarbital (ISO)

rac-lactic acid (ISO)

resveratrol (EXP)

silver atom (EXP)

silver(0) (EXP)

sodium arsenite (EXP,ISO)

sunitinib (ISO)

tamoxifen (EXP)

testosterone (EXP,ISO)

tetrachloromethane (EXP)

thapsigargin (EXP,ISO)

thioacetamide (ISO)

titanium dioxide (EXP)

trichloroethene (ISO)

trovafloxacin (EXP)

tunicamycin (ISO)

valproic acid (EXP,ISO)

vinclozolin (ISO)

zoledronic acid (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

antigen processing and presentation (ISO)

endosome to melanosome transport (ISO)

intracellular protein transport (IBA)

melanosome assembly (ISO,ISS)

melanosome organization (IBA)

mitochondrion organization (ISO)

phagosome maturation (ISO,ISS)

protein localization to membrane (ISO)

vesicle-mediated transport (IEA)

Cellular Component

cytoplasmic vesicle (IEA)

early endosome (ISO)

early endosome lumen (ISO)

endomembrane system (IBA)

endoplasmic reticulum (ISO)

Golgi apparatus (IEA)

melanosome (IBA,IDA,ISO)

melanosome membrane (ISO)

membrane (ISO)

mitochondria-associated endoplasmic reticulum membrane contact site (ISO)

mitochondrial outer membrane (ISO)

mitochondrion (HDA,IBA,ISO)

phagocytic vesicle (ISO,ISS)

phagocytic vesicle membrane (IEA)

trans-Golgi network (IBA,IEA)

vesicle (IEA)

Molecular Function

AP-1 adaptor complex binding (ISO)

AP-2 adaptor complex binding (ISO)

AP-3 adaptor complex binding (ISO)

BLOC-2 complex binding (ISO)

GTP binding (IEA)

GTP-dependent protein binding (ISO)

GTPase activity (IBA,IEA,ISO)

nucleotide binding (IEA)

protein binding (IPI)

Phenotype Annotations Click to see Annotation Detail View

Mammalian Phenotype

abnormal cytokine secretion (IAGP)

abnormal heart morphology (IEA)

abnormal platelet dense granule morphology (IAGP)

abnormal pulmonary acinus morphology (IAGP)

decreased colon length (IAGP)

decreased eye pigmentation (IAGP)

decreased platelet ADP level (IAGP)

decreased platelet aggregation (IAGP)

decreased platelet ATP level (IAGP)

decreased platelet dense granule number (IAGP)

decreased platelet serotonin level (IAGP)

decreased susceptibility to induced thrombosis (IAGP)

diluted coat color (IAGP)

enlarged alveolar lamellar bodies (IAGP)

enlarged heart (IEA)

hydrometra (IEA)

increased bleeding time (IAGP)

increased grip strength (IEA)

increased kidney weight (IEA)

increased neutrophil cell number (IAGP)

increased susceptibility to bacterial infection (IAGP)

increased susceptibility to colitis induced morbidity/mortality (IAGP)

increased susceptibility to induced colitis (IAGP)

preweaning lethality, incomplete penetrance (IEA)

thick pulmonary interalveolar septum (IAGP)

References

References - curated

#	Reference Title	Reference Citation
1.	Functional annotation of a full-length mouse cDNA collection.	Kawai J, etal., Nature. 2001 Feb 8;409(6821):685-90.
2.	Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse development.	Ko MS, etal., Development 2000 Apr;127(8):1737-49.
3.	MGDs mouse GO annotations	MGD data from the GO Consortium
4.	Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs.	Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73.
5.	Mouse MP Annotation Import Pipeline	RGD automated import pipeline
6.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

Additional References at PubMed

PMID:10349636	PMID:11042159	PMID:11076861	PMID:11773082	PMID:11856727	PMID:12477932	PMID:12578829	PMID:14499590	PMID:15489334	PMID:15782199	PMID:16141072	PMID:16141073
PMID:16923123	PMID:18614015	PMID:19403694	PMID:20670942	PMID:21267068	PMID:21677750	PMID:21873635	PMID:23162001	PMID:24194600	PMID:26275310	PMID:26559473	PMID:26620560
PMID:26867180	PMID:26885862	PMID:27626380	PMID:28378742	PMID:30333037	PMID:30338217	PMID:31199852	PMID:31399401	PMID:32554809	PMID:32703879	PMID:33392103	PMID:36430618
PMID:37625588	PMID:37793839	PMID:38355793

Genomics

Comparative Map Data

Rab32
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	10	10,420,783 - 10,433,951 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	10	10,420,746 - 10,434,009 (-)	Ensembl		GRCm39 Ensembl
GRCm38	10	10,545,039 - 10,558,207 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	10	10,545,002 - 10,558,265 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	10	10,264,837 - 10,278,005 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	10	10,235,229 - 10,248,397 (-)	NCBI		MGSCv36	mm8
Celera	10	10,440,276 - 10,453,408 (-)	NCBI		Celera
Cytogenetic Map	10	A1	NCBI
cM Map	10	3.44	NCBI

RAB32
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	6	146,543,833 - 146,554,953 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	6	146,543,833 - 146,554,953 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	6	146,864,969 - 146,876,089 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	6	146,906,521 - 146,917,782 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	6	146,906,520 - 146,917,779	NCBI
Celera	6	147,605,264 - 147,616,521 (+)	NCBI		Celera
Cytogenetic Map	6	q24.3	NCBI
HuRef	6	144,428,711 - 144,439,665 (+)	NCBI		HuRef
CHM1_1	6	147,128,062 - 147,139,320 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	6	147,737,054 - 147,748,175 (+)	NCBI		T2T-CHM13v2.0

Rab32
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	1	6,766,448 - 6,781,258 (-)	NCBI		GRCr8
mRatBN7.2	1	4,946,193 - 4,961,003 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	1	4,945,036 - 4,960,934 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	1	4,623,280 - 4,644,402 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	1	10,623,631 - 10,644,753 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	1	4,905,472 - 4,926,595 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	1	4,638,663 - 4,653,220 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	1	4,637,491 - 4,653,210 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	1	6,299,748 - 6,314,539 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	1	5,203,908 - 5,218,416 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
Celera	1	3,479,984 - 3,494,673 (-)	NCBI		Celera
Cytogenetic Map	1	p13	NCBI

Rab32
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955436	14,171,123 - 14,177,577 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955436	14,171,123 - 14,177,255 (-)	NCBI	ChiLan1.0	ChiLan1.0

RAB32
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	5	166,541,048 - 166,561,393 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	6	164,438,382 - 164,453,907 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	6	144,339,323 - 144,354,885 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3

RAB32
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	1	37,706,809 - 37,719,044 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	1	37,712,142 - 37,718,266 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	1	38,588,880 - 38,611,342 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	1	37,866,146 - 37,889,054 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	1	37,865,534 - 37,889,049 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	1	37,743,864 - 37,766,334 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	1	37,615,197 - 37,637,672 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	1	37,945,159 - 37,967,854 (+)	NCBI		UU_Cfam_GSD_1.0

Rab32
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404946	132,783,627 - 132,799,818 (+)	NCBI		HiC_Itri_2
SpeTri2.0	NW_004936489	35,620 - 51,809 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

RAB32
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	1	19,075,271 - 19,097,870 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	1	19,076,301 - 19,097,647 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	1	21,320,352 - 21,341,852 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

RAB32
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	13	25,265,831 - 25,281,106 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
Vero_WHO_p1.0	NW_023666040	201,227,806 - 201,242,889 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Rab32
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624753	7,900,267 - 7,917,854 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624753	7,900,027 - 7,917,944 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in Rab32
407 total Variants

miRNA Target Status

Predicted Target Of

	Summary Value
Count of predictions:	438
Count of miRNA genes:	315
Interacting mature miRNAs:	360
Transcripts:	ENSMUST00000019974
Prediction methods:	Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCm39)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
11532718	Sluc44f_m	susceptibility to lung cancer 44f (mouse)					10	1	26289265	Mouse
11532717	Sluc44g_m	susceptibility to lung cancer 44g (mouse)					10	1	26289265	Mouse
1300881	Sluc29_m	susceptibility to lung cancer 29 (mouse)			Not determined		10	1	26289265	Mouse
12879494	Facq1_m	fear acquisition QTL 1 (mouse)					10	1	31279130	Mouse
1300759	Geot_m	geotaxia (mouse)			Not determined		10	1	26289265	Mouse
1558865	Lith21_m	lithogenic gene 21 (mouse)			Not determined		10	8525003	42525126	Mouse
15039341	Nmrs28_m	NAFLD-associated magnetic resonance shift 28 (mouse)					10	351001	34351001	Mouse
1300997	Eae15_m	susceptibility to experimental allergic encephalomyelitis 15 (mouse)			Not determined		10	4408154	38408276	Mouse
1301386	Sysbp1_m	systolic blood pressure 1 (mouse)			Not determined		10	10108265	87401095	Mouse
11532725	Sluc44b_m	susceptibility to lung cancer 44b (mouse)					10	1	26289265	Mouse
1301129	Alcp15_m	alcohol preference locus 15 (mouse)			Not determined		10	9890264	43890391	Mouse
11532724	Sluc44c_m	susceptibility to lung cancer 44c (mouse)					10	1	26289265	Mouse
1301448	Pas11_m	pulmonary adenoma susceptibility 11 (mouse)			Not determined		10	9890264	43890391	Mouse
11532723	Sluc44d_m	susceptibility to lung cancer 44d (mouse)					10	1	26289265	Mouse
11532722	Sluc44e_m	susceptibility to lung cancer 44e (mouse)					10	1	26289265	Mouse
11532721	Sluc44_m	susceptibility to lung cancer 44 (mouse)					10	1	26289265	Mouse
11532720	Sluc44a_m	susceptibility to lung cancer 44a (mouse)					10	1	26289265	Mouse
1302092	Ath11_m	atherosclerosis 11 (mouse)			Not determined		10	6151945	58693521	Mouse
1357813	Ath20_m	atherosclerosis 20 (mouse)			Not determined		10	3283185	37283334	Mouse
1300790	Pgia6_m	proteoglycan induced arthritis 6 (mouse)			Not determined		10	3810171	37810295	Mouse
1302133	Alcp16_m	alcohol preference locus 16 (mouse)			Not determined		10	9890264	43890391	Mouse
11533917	Mts2_m	mammary tumor susceptibility 2 (mouse)					10	1	26289265	Mouse
1301796	Mop2_m	morphine preference 2 (mouse)			Not determined		10	9289119	29028424	Mouse
13208561	Wght8_m	weight 8 (mouse)					10	4950000	43875996	Mouse
1357740	Obsty3_m	obesity 3 (mouse)			Not determined		10	8235478	116190980	Mouse

Markers in Region

Rab32

Mouse Assembly	Chr	Position (strand)	Source	JBrowse
GRCm38	10	10,545,108 - 10,546,011	UniSTS	GRCm38
MGSCv37	10	10,264,906 - 10,265,809	UniSTS	GRCm37
Celera	10	10,440,345 - 10,441,248	UniSTS
Cytogenetic Map	10	A1	UniSTS
cM Map	10		UniSTS

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_026405	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AB232627	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AC100149	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK012701	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK078874	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK088661	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK151543	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK159102	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK159901	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK163620	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK178485	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK178960	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK180112	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK181018	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK196864	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK205226	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK206948	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK213739	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK215099	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK216759	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AY135650	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC016409	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC055945	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH466562	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSMUST00000019974 ⟹ ENSMUSP00000019974

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	10	10,420,746 - 10,434,009 (-)	Ensembl
GRCm38.p6 Ensembl	10	10,545,002 - 10,558,265 (-)	Ensembl

Ensembl Acc Id:

ENSMUST00000220018 ⟹ ENSMUSP00000152210

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	10	10,421,939 - 10,433,925 (-)	Ensembl
GRCm38.p6 Ensembl	10	10,546,195 - 10,558,181 (-)	Ensembl

RefSeq Acc Id:

NM_026405 ⟹ NP_080681

RefSeq Status:

PROVISIONAL

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	10	10,420,783 - 10,433,951 (-)	NCBI
GRCm38	10	10,545,039 - 10,558,207 (-)	ENTREZGENE
MGSCv37	10	10,264,837 - 10,278,005 (-)	RGD
Celera	10	10,440,276 - 10,453,408 (-)	RGD
cM Map	10		ENTREZGENE

Sequence:

show sequence

AGACTGTTCTGGGCCAGCAGCGCGCAGTAGGTTCCGGGTCCGGTGACTCGCGTGACTGCGCGGA
CGGAGTATCTGTCAGGTCGGCCTTTGGGGAAGAAGTTCCCTAGGCCGTGGCACCCATGGCGGGC
GAGGGACTAGGGCAACAGGGCGCGTCGGCCACCGCGGCGCCGGAGACCCGAGAGCACCTCTTTA
AGGTGCTGGTCATCGGCGAGCTCGGCGTGGGTAAGACGAGCATCATCAAGCGCTACGTGCACCA
GCTCTTCTCCCAGCACTACCGCGCCACCATTGGCGTGGACTTCGCCCTCAAAGTTCTCAACTGG
GACAGCAGGACGCTCGTGCGCCTGCAGCTGTGGGATATCGCGGGACAGGAACGGTTTGGCAACA
TGACTCGAGTATACTATAAGGAAGCTCTTGGAGCATTTGTAGTCTTTGATATATCGAGAAGTTC
TACATTTGATGCAGTCCTAAAATGGAAAAACGATCTGGATAGTAAAGTTCATCTTCCCAACGGC
AGCCCCATTCCTGCTGTCCTCCTAGCTAACAAATGTGACCAGAAGAAGGACAACAGCCAGAGTC
CTTCCCAGATGGACCAGTTTTGTAAAGACCATGGCTTCACTGGATGGTTTGAAACCTCTGCCAA
GGATAATATAAACATCGACGAGGCCACCCGCTTCCTAGTGGAAAACATGCTTGCAAACCAGCAA
AGTTTTCCTAGTGAAGAAATCGACCTGGACAGAATTAAACTGGTAGAGGAGCCCCCCACAACAA
AGCCCAGGTCCCAGTGCTGCTGATGTGTCTCTGTGCCCCATGTGCTGTCTCCTTGGTCCTGCCT
GTATGGAGGCTGCCCCTTTCCAACCCTCGGTGCCACTGTGCCCTGTGACTCTCCCTCGGGGGGC
GCTGCTTTACCGTTCAGCTGTACAGGCACCGCCCATCTGAAGATCCATGGAGAACTGTTCCCAT
GAGAGGCCCTGTGACTTTACCCGAGGACCCCTCAGGCTCTTGTCATACTGCCAAATGCAAACTA
ATGTTTACAGCCTTTGAAATATTTTTGTACATGAATTTCAAAAGTTAGCTTTTAGTGTGAGTCC
TAGGTGGGGTCATAGAAAAGGTCCCCTCGGCCTGGTGATGGTGATTGTGACTTTTCAGTGACTT
TGTTCCTGTATACATCCTCACCTAAGCACATTTATTTTTTCTTTTCTAAGGTGTTAGCTACAGA
GACCTGAAGGTCACGTGCAGTTATATCCTAGTCAAAACTTTGTACGTCACGTAAAATTTTCATC
CTTAAATAACATGATTCCATAACACATAGCTGTTGTACAATGAAGTCACTCTGACTCACCTTAA
GAACACCTTCTTTAATTAGTCAAAAAGTCCCGAGCTAGGAATGTGGCTCATTTATGTAGAGTGC
TTACCTAGAATGCGATAGACTCTCTGGGTCTGCAGTTCTGAGAGACCAAAAAGAGTTAGCACCA
TACCTGTTTTATGTGTGTCTCCTTCTGGATCCTCTCTCGGTGTGGTTGCCACTACCACTTGGAA
ACAATATAAATGAAGATTTTGTTTCTCTGCCCTCTATTCTGTACTTATAGCCTAGGGCCATATT
GAACATACAGTGGTACTAAGAGGAACTTGTCTTTCCGGTTCTGTCATAATAATAATGGTCAGGA
GGGGAATTCTTTTTCAAAACATATGCAATTATAGCCAAGTTTCTGTAGTGTAAAACCTGGAAGA
AAGTAGACCATGTCTAGTTTTGTCTGTGGTTTCTAATACTGGTTATATAATGCCTCGGGCACTT
AGGAAGACCCACTATACTGTATTGCCTTTAACTCAGTGAAAGAAAGGAATAAATATTTTAACCT
AAGCCTGTGTGTTGAATGAATGTGGTTAGTTCTAGGAAGGAACTGTTCTGGTTTAGAAAATGTG
TTTGGCTGAGGTGGTGGTTCACATCTGTCATCCCAGCCTGCAGGAGACAGAGACAAAGGGTGGG
AGTGCATATCTTGGCTACATTGCAAGTTCAAGAATAGCCGGTGCTACACAAGAGGCTTTCTCCC
AAAATT

hide sequence

Protein Sequences


Protein RefSeqs	NP_080681	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAH16409	(Get FASTA)	NCBI Sequence Viewer
	AAH55945	(Get FASTA)	NCBI Sequence Viewer
	AAN11298	(Get FASTA)	NCBI Sequence Viewer
	BAB28421	(Get FASTA)	NCBI Sequence Viewer
	BAC37434	(Get FASTA)	NCBI Sequence Viewer
	BAC40486	(Get FASTA)	NCBI Sequence Viewer
	BAE30489	(Get FASTA)	NCBI Sequence Viewer
	BAE34818	(Get FASTA)	NCBI Sequence Viewer
	BAE35466	(Get FASTA)	NCBI Sequence Viewer
	BAE37425	(Get FASTA)	NCBI Sequence Viewer
	BAF02889	(Get FASTA)	NCBI Sequence Viewer
	EDL03526	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSMUSP00000019974
	ENSMUSP00000019974.4
	ENSMUSP00000152210.2
GenBank Protein	Q9CZE3	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:	NP_080681 ⟸ NM_026405
- UniProtKB:	Q8BVD3 (UniProtKB/Swiss-Prot), Q3TXU7 (UniProtKB/Swiss-Prot), Q91YN4 (UniProtKB/Swiss-Prot), Q9CZE3 (UniProtKB/Swiss-Prot), Q0PD23 (UniProtKB/TrEMBL), Q3TW01 (UniProtKB/TrEMBL)
- Sequence:	show sequence MAGEGLGQQGASATAAPETREHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKV LNWDSRTLVRLQLWDIAGQERFGNMTRVYYKEALGAFVVFDISRSSTFDAVLKWKNDLDSKVHL PNGSPIPAVLLANKCDQKKDNSQSPSQMDQFCKDHGFTGWFETSAKDNINIDEATRFLVENMLA NQQSFPSEEIDLDRIKLVEEPPTTKPRSQCC hide sequence

Ensembl Acc Id:

ENSMUSP00000019974 ⟸ ENSMUST00000019974

Ensembl Acc Id:

ENSMUSP00000152210 ⟸ ENSMUST00000220018

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-Q9CZE3-F1-model_v2	AlphaFold	Q9CZE3	1-223	view protein structure

Promoters

RGD ID:

6819788

Promoter ID:

MM_KWN:3528

Type:

CpG-Island

SO ACC ID:

SO:0000170

Source:

MPROMDB

Tissues & Cell Lines:

BoneMarrow_0Hour, BoneMarrow_2Hour, BoneMarrow_4Hour, Brain, Kidney, Liver, Lung, MEF_B4, MEF_B6

Transcripts:

OTTMUST00000068117

Position:

Mouse Assembly	Chr	Position (strand)	Source
MGSCv36	10	10,277,686 - 10,278,186 (-)	MPROMDB

RGD ID:

8671482

Promoter ID:

EPDNEW_M13772

Type:

initiation region

Name:

Rab32_1

Description:

Mus musculus RAB32, member RAS oncogene family , mRNA.

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm38	10	10,558,184 - 10,558,244	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	MGI:1915094	AgrOrtholog
Ensembl Genes	ENSMUSG00000019832	Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript	ENSMUST00000019974	ENTREZGENE
	ENSMUST00000019974.5	UniProtKB/Swiss-Prot
	ENSMUST00000220018.3	UniProtKB/TrEMBL
Gene3D-CATH	3.40.50.300	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro	P-loop_NTPase	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	Rab29/Rab38/Rab32	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	Small_GTP-bd_dom	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	Small_GTPase	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report	mmu:67844	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
MGD	MGI:1915094	ENTREZGENE
NCBI Gene	67844	ENTREZGENE
PANTHER	RAB FAMILY	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	RAS-RELATED PROTEIN RAB-32 ISOFORM X1	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam	Ras	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	Roc	UniProtKB/TrEMBL
PhenoGen	Rab32	PhenoGen
PRINTS	RASTRNSFRMNG	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PROSITE	RAB	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	RAS	UniProtKB/TrEMBL
SMART	RAB	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	RAN	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	RAS	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	RHO	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP	SSF52540	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt	A0A1Y7VIZ0_MOUSE	UniProtKB/TrEMBL
	Q0PD23	ENTREZGENE, UniProtKB/TrEMBL
	Q3TW01	ENTREZGENE, UniProtKB/TrEMBL
	Q3TXU7	ENTREZGENE
	Q8BVD3	ENTREZGENE
	Q91YN4	ENTREZGENE
	Q9CZE3	ENTREZGENE, UniProtKB/Swiss-Prot
UniProt Secondary	Q3TXU7	UniProtKB/Swiss-Prot
	Q8BVD3	UniProtKB/Swiss-Prot
	Q91YN4	UniProtKB/Swiss-Prot

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - CTD

Imported Disease Annotations - OMIM

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