Slc25a23 (solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 23) - Rat Genome Database

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Gene: Slc25a23 (solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 23) Mus musculus
Analyze
Symbol: Slc25a23
Name: solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 23
RGD ID: 1558452
MGI Page MGI
Description: Predicted to enable ADP:phosphate antiporter activity and ATP:phosphate antiporter activity. Acts upstream of or within several processes, including adenine nucleotide transport; cellular response to calcium ion; and regulation of oxidative phosphorylation. Located in mitochondrion. Is expressed in embryo. Orthologous to human SLC25A23 (solute carrier family 25 member 23).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: 2310067G05Rik; calcium-binding mitochondrial carrier protein SCaMC-3; mitochondrial adenyl nucleotide antiporter SLC25A23; SCaMC; SCaMC-3; short calcium-binding mitochondrial carrier protein 3; small calcium-binding mitochondrial carrier protein 3; solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 23; solute carrier family 25 member 23
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391757,350,711 - 57,366,863 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1757,350,711 - 57,366,863 (-)EnsemblGRCm39 Ensembl
GRCm381757,043,711 - 57,059,909 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1757,043,711 - 57,059,863 (-)EnsemblGRCm38mm10GRCm38
MGSCv371757,183,134 - 57,199,286 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361756,728,621 - 56,745,010 (-)NCBIMGSCv36mm8
Celera1761,391,640 - 61,407,783 (-)NCBICelera
Cytogenetic Map17DNCBI
cM Map1729.64NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(+)-schisandrin B  (ISO)
1,2-dichloroethane  (EXP)
17beta-estradiol  (EXP)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
3,3',5,5'-tetrabromobisphenol A  (EXP)
3-chloropropane-1,2-diol  (ISO)
4,4'-sulfonyldiphenol  (EXP)
4-hydroxyphenyl retinamide  (EXP)
5-fluorouracil  (ISO)
6-propyl-2-thiouracil  (ISO)
acetamide  (ISO)
acrylamide  (ISO)
aflatoxin B1  (EXP)
amitrole  (ISO)
antirheumatic drug  (ISO)
atrazine  (ISO)
benzo[a]pyrene  (EXP,ISO)
bisphenol A  (EXP,ISO)
cadmium dichloride  (ISO)
carbon nanotube  (EXP)
choline  (EXP)
cisplatin  (ISO)
cobalt dichloride  (ISO)
cocaine  (ISO)
copper atom  (ISO)
copper(0)  (ISO)
copper(II) chloride  (ISO)
copper(II) sulfate  (ISO)
crocidolite asbestos  (EXP)
cyclosporin A  (ISO)
DDE  (ISO)
decabromodiphenyl ether  (ISO)
Dibutyl phosphate  (ISO)
dicrotophos  (ISO)
dioxygen  (EXP)
dorsomorphin  (ISO)
doxorubicin  (ISO)
endosulfan  (ISO)
ethanol  (EXP)
fenthion  (EXP)
fluoranthene  (EXP)
flutamide  (ISO)
folic acid  (EXP)
furan  (ISO)
gallic acid  (ISO)
gentamycin  (ISO)
heroin  (ISO)
hydrogen peroxide  (ISO)
L-methionine  (EXP)
lead diacetate  (ISO)
lead(0)  (ISO)
methimazole  (ISO)
methyl methanesulfonate  (ISO)
methylmercury chloride  (ISO)
nefazodone  (ISO)
nickel atom  (ISO)
nimesulide  (ISO)
ochratoxin A  (ISO)
p-chloromercuribenzoic acid  (ISO)
paracetamol  (EXP,ISO)
paraquat  (ISO)
perfluorooctanoic acid  (ISO)
phenformin  (ISO)
pirinixic acid  (EXP,ISO)
pregnenolone 16alpha-carbonitrile  (ISO)
resveratrol  (ISO)
rotenone  (ISO)
SB 431542  (ISO)
silicon dioxide  (ISO)
sodium arsenite  (ISO)
sodium dichromate  (ISO)
succimer  (EXP)
sulfadimethoxine  (ISO)
sunitinib  (ISO)
tetrachloromethane  (EXP,ISO)
thimerosal  (ISO)
thioacetamide  (ISO)
thiram  (ISO)
titanium dioxide  (EXP)
toluene  (ISO)
trichloroethene  (ISO)
triphenyl phosphate  (ISO)
troglitazone  (EXP)
tungsten  (EXP)
tunicamycin  (ISO)
valdecoxib  (ISO)
valproic acid  (EXP,ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
References

References - curated
# Reference Title Reference Citation
1. Functional annotation of a full-length mouse cDNA collection. Kawai J, etal., Nature. 2001 Feb 8;409(6821):685-90.
2. MGDs mouse GO annotations MGD data from the GO Consortium
3. Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73.
4. Mouse MP Annotation Import Pipeline RGD automated import pipeline
5. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
6. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:8889548   PMID:10349636   PMID:11042159   PMID:11076861   PMID:12477932   PMID:14681479   PMID:15054102   PMID:15782199   PMID:16141072   PMID:16141073   PMID:18614015   PMID:21267068  
PMID:21677750   PMID:21873635   PMID:23344948   PMID:24952082   PMID:25716855   PMID:30623988   PMID:32325033   PMID:37142655  


Genomics

Comparative Map Data
Slc25a23
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391757,350,711 - 57,366,863 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1757,350,711 - 57,366,863 (-)EnsemblGRCm39 Ensembl
GRCm381757,043,711 - 57,059,909 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1757,043,711 - 57,059,863 (-)EnsemblGRCm38mm10GRCm38
MGSCv371757,183,134 - 57,199,286 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361756,728,621 - 56,745,010 (-)NCBIMGSCv36mm8
Celera1761,391,640 - 61,407,783 (-)NCBICelera
Cytogenetic Map17DNCBI
cM Map1729.64NCBI
SLC25A23
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38196,436,081 - 6,459,792 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl196,436,079 - 6,465,203 (-)EnsemblGRCh38hg38GRCh38
GRCh37196,440,075 - 6,459,803 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36196,391,075 - 6,410,781 (-)NCBINCBI36Build 36hg18NCBI36
Build 34196,391,074 - 6,410,781NCBI
Celera196,379,913 - 6,399,607 (-)NCBICelera
Cytogenetic Map19p13.3NCBI
HuRef196,200,943 - 6,222,762 (-)NCBIHuRef
CHM1_1196,439,650 - 6,459,340 (-)NCBICHM1_1
T2T-CHM13v2.0196,425,594 - 6,449,293 (-)NCBIT2T-CHM13v2.0
Slc25a23
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr891,969,633 - 1,985,365 (-)NCBIGRCr8
mRatBN7.291,882,636 - 1,898,369 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl91,882,621 - 1,898,561 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx92,318,184 - 2,332,116 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.097,667,541 - 7,681,473 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.096,623,402 - 6,637,334 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.099,987,988 - 10,003,599 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl99,988,055 - 10,001,962 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.098,988,689 - 9,004,249 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Celera96,619,249 - 6,633,160 (+)NCBICelera
Cytogenetic Map9q11NCBI
Slc25a23
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554953,155,224 - 3,170,369 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554953,155,024 - 3,171,279 (+)NCBIChiLan1.0ChiLan1.0
SLC25A23
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v22010,849,590 - 10,867,823 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11910,075,652 - 10,093,741 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0195,474,538 - 5,487,364 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1196,388,937 - 6,410,481 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl196,388,937 - 6,410,480 (-)Ensemblpanpan1.1panPan2
SLC25A23
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12053,722,841 - 53,736,205 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2053,722,320 - 53,733,331 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2053,469,862 - 53,483,134 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.02054,376,787 - 54,390,281 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2054,376,781 - 54,390,615 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12053,443,639 - 53,456,913 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02053,892,079 - 53,905,333 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02054,121,061 - 54,134,550 (+)NCBIUU_Cfam_GSD_1.0
Slc25a23
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405118214,028,801 - 214,045,845 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365883,792,778 - 3,808,593 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365883,792,760 - 3,804,788 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
SLC25A23
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl272,625,583 - 72,641,791 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1272,625,544 - 72,643,572 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2272,958,959 - 72,965,057 (-)NCBISscrofa10.2Sscrofa10.2susScr3
SLC25A23
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.166,042,186 - 6,063,969 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl66,044,516 - 6,063,842 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_0236660811,934,087 - 1,959,948 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Slc25a23
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248283,559,813 - 3,572,395 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046248283,558,034 - 3,572,426 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Slc25a23
515 total Variants
miRNA Target Status (No longer updated)

Predicted Target Of
Summary Value
Count of predictions:1561
Count of miRNA genes:649
Interacting mature miRNAs:794
Transcripts:ENSMUST00000040280, ENSMUST00000163442, ENSMUST00000165187, ENSMUST00000170015, ENSMUST00000171128, ENSMUST00000171528
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
4141758Pstc5_mperiosteal circumference 5 (mouse)Not determined175710765191107803Mouse
1300885Mbis4_mMycobacterium bovis-induced systemic lupus erythematosus 4 (mouse)Not determined173517581770165926Mouse
4141879Chlq9_mcirculating hormone level QTL 9 (mouse)Not determined175175842585758612Mouse
1357532Bmch7_mbone mechanical trait 7 (mouse)Not determined175175842585758612Mouse
1301338Lmr1_mleishmaniasis resistance 1 (mouse)Not determined171008134086996400Mouse
1300703Uvbi2_mUVB induced immunosuppression 2 (mouse)Not determined172862240662622654Mouse
12910536Nrq8a_mnoise-induced hearing loss resistant QTL 8a (mouse)175710765191107803Mouse
12910537Nrq8_mnoise-induced hearing loss resistant QTL 8 (mouse)175710765191107803Mouse
15039348Nmrs37_mNAFLD-associated magnetic resonance shift 37 (mouse)172781520961815209Mouse
1357447Heal13_mwound healing/regeneration 13 (mouse)Not determined175710765191107803Mouse
26884428Cvht3_mcranial vault height 3, 5 week (mouse)174651092682407429Mouse
4142243Lfnq5_mlung function QTL 5 (mouse)Not determined5173897957534623Mouse
1301454Eae5_msusceptibility to experimental allergic encephalomyelitis 5 (mouse)Not determined172461275058612864Mouse
10755514Amzn2_manatomical modifier of Zfp423 2 (mouse)173596629469966424Mouse
10755525Lymph2_mlymphocyte differential 2 (mouse)173880562672805626Mouse
1300592Pcyts5_mplasmacytoma susceptibility 5 (mouse)Not determined173871288772712970Mouse
4140955Plgr1_mplague resistance locus 1 (mouse)Not determined3103350065033630Mouse
1302005Loco2_mlocomotor activity 2 (mouse)Not determined172688497260885114Mouse
4141272Tfv1_mtotal food volume 1 (mouse)Not determined485475265637357Mouse
10755534Lymph4_mlymphocyte differential 4 (mouse)173880562672805626Mouse
4141011Bmd26_mbone mineral density 26 (mouse)Not determined175710765191107803Mouse
1300735Pgia20_mproteoglycan induced arthritis 20 (mouse)Not determined175710765191107803Mouse
1357754Ahl3_mage related hearing loss 3 (mouse)Not determined175020395784204103Mouse
10412204Bbaa29_mB.burgdorferi-associated arthritis 29 (mouse)Not determined172605118560051352Mouse
12904951Smmq2_msoleus muscle mass QTL 2 (mouse)173678974370789743Mouse
14700692Cihvtq1_mcoxsackieviral infection heart viral titre QTL 1 (mouse)175000702870006995Mouse
4141319Hmtb8_mhemostasis and thrombosis rebleeding time 8 (mouse)Not determined4053444774534623Mouse
4142150Stheal11_msoft tissue heal 11 (mouse)Not determined171228621183361768Mouse
15039324Nmrs48_mNAFLD-associated magnetic resonance shift 48 (mouse)174093918774939187Mouse
26884390Skwq9_mskull length QTL 9, 10 week (mouse)174371089167806995Mouse
1300589Myaa2_mmodifier of Yaa 2 (mouse)Not determined173013255564132666Mouse

Markers in Region
D9Mit34.1  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map7F1UniSTS
Cytogenetic Map13D1UniSTS
Cytogenetic Map1C3UniSTS
Cytogenetic Map2C1.3UniSTS
Cytogenetic Map19D1UniSTS
Cytogenetic Map9F1UniSTS
Cytogenetic Map1FUniSTS
Cytogenetic Map7D3UniSTS
Cytogenetic Map11E2UniSTS
Cytogenetic Map3F2UniSTS
Cytogenetic Map14C3UniSTS
Cytogenetic Map9A3UniSTS
Cytogenetic Map2H2UniSTS
Cytogenetic Map11E1UniSTS
Cytogenetic Map2H4UniSTS
Cytogenetic Map8B3.3UniSTS
Cytogenetic Map4D1UniSTS
Cytogenetic Map4E2UniSTS
Cytogenetic Map2E5UniSTS
Cytogenetic Map11B4UniSTS
Cytogenetic Map5G3UniSTS
Cytogenetic MapXA5UniSTS
Cytogenetic Map10C1UniSTS
Cytogenetic Map12A1.1UniSTS
Cytogenetic Map6F2UniSTS
Cytogenetic Map1C1.3UniSTS
Cytogenetic Map16B1UniSTS
Cytogenetic Map12C1UniSTS
Cytogenetic Map7E2UniSTS
Cytogenetic Map9F2UniSTS
Cytogenetic Map5FUniSTS
Cytogenetic Map2H1UniSTS
Cytogenetic Map2E2UniSTS
Cytogenetic Map15F1UniSTS
Cytogenetic Map15E1UniSTS
Cytogenetic Map3G2UniSTS
Cytogenetic Map6F3UniSTS
Cytogenetic Map13B3UniSTS
Cytogenetic Map12F1UniSTS
Cytogenetic Map1E4UniSTS
Cytogenetic Map1E3UniSTS
Cytogenetic Map5E1UniSTS
Cytogenetic Map7F3UniSTS
Cytogenetic Map16B3UniSTS
Cytogenetic Map14D2UniSTS
Cytogenetic Map19C2UniSTS
Cytogenetic Map19D3UniSTS
Cytogenetic Map1H5UniSTS
Cytogenetic Map1DUniSTS
Cytogenetic Map14BUniSTS
Cytogenetic Map11CUniSTS
Cytogenetic Map10B4UniSTS
Cytogenetic Map6G3UniSTS
Cytogenetic Map7A1UniSTS
Cytogenetic Map7A3UniSTS
Cytogenetic Map8E1UniSTS
Cytogenetic Map8A2UniSTS
Cytogenetic Map4D3UniSTS
Cytogenetic Map2BUniSTS
Cytogenetic Map5A3UniSTS
Cytogenetic Map9DUniSTS
Cytogenetic Map5C1UniSTS
Cytogenetic Map19C3UniSTS
Cytogenetic Map13A2-A3UniSTS
Cytogenetic Map4C6UniSTS
Cytogenetic Map17DUniSTS
Cytogenetic Map17B1UniSTS
Cytogenetic Map17A3.3UniSTS
Cytogenetic Map13A1UniSTS
Cytogenetic Map3F2.1UniSTS
Cytogenetic Map15D3UniSTS
Cytogenetic Map8D2UniSTS
Cytogenetic Map12A3UniSTS
Cytogenetic Map1H2.1UniSTS
Cytogenetic Map7F5UniSTS
Cytogenetic Map7CUniSTS
Cytogenetic Map2E1UniSTS
Cytogenetic Map11B2UniSTS
Cytogenetic Map16A3UniSTS
Cytogenetic Map5C3.3UniSTS
Cytogenetic Map16A1UniSTS
Cytogenetic Map5G1UniSTS
Cytogenetic Map6A2UniSTS
Cytogenetic Map7B1UniSTS
Cytogenetic Map3F2.2UniSTS
Cytogenetic Map5C3.1UniSTS
Cytogenetic Map2C3UniSTS
Cytogenetic Map17A3.2-A3.3UniSTS
Cytogenetic Map6E3UniSTS
Cytogenetic Map11B1.1UniSTS
Cytogenetic Map1H6UniSTS
Cytogenetic Map2C2UniSTS
Cytogenetic Map19CUniSTS
Cytogenetic Map17E1.3UniSTS
Cytogenetic Map5A1UniSTS
Cytogenetic Map11B5UniSTS
Cytogenetic Map9A5.2UniSTS
Cytogenetic Map1A1UniSTS
Cytogenetic Map13A5UniSTS
Cytogenetic MapXA1.1UniSTS
Cytogenetic Map4D2.3UniSTS
Cytogenetic Map4B3UniSTS
Cytogenetic Map3A3UniSTS
Cytogenetic Map2A3UniSTS
Cytogenetic Map8CUniSTS
Cytogenetic Map12EUniSTS
Cytogenetic Map10C2UniSTS
Cytogenetic Map5G2UniSTS
Cytogenetic Map5B1UniSTS
Cytogenetic Map3F1UniSTS
Cytogenetic Map2H3UniSTS
Cytogenetic Map2A1UniSTS
Cytogenetic Map1H1UniSTS
Cytogenetic Map15F3UniSTS
Cytogenetic Map9E1UniSTS
Cytogenetic Map9CUniSTS
Cytogenetic Map1A2UniSTS
Cytogenetic Map12C3UniSTS
Cytogenetic Map19AUniSTS
Cytogenetic Map5B2UniSTS
Cytogenetic Map3DUniSTS
Cytogenetic Map11B1.3UniSTS
Cytogenetic Map6B1UniSTS
Cytogenetic MapXC-DUniSTS
Cytogenetic Map5G1.3UniSTS
Cytogenetic Map7D1-E2UniSTS
Cytogenetic Map11A1UniSTS
Cytogenetic Map13B1UniSTS
Cytogenetic Map1H2.2UniSTS
Cytogenetic Map8C3UniSTS
Cytogenetic Map11DUniSTS
Cytogenetic MapXA7.3UniSTS
Cytogenetic Map16C1.1UniSTS
Cytogenetic Map15F2UniSTS
Cytogenetic Map9A2UniSTS
Cytogenetic Map1H4-H6UniSTS
Cytogenetic Map12D2UniSTS
Cytogenetic Map1G3UniSTS
Cytogenetic Map5E5UniSTS
Cytogenetic Map1H3UniSTS
Cytogenetic Map19BUniSTS
cM Map950.0UniSTS
Whitehead Genetic943.7UniSTS
Slc25a23  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map17DUniSTS
cM Map1729.64UniSTS


Expression

RNA-SEQ Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001379067 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001379068 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001379069 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001379070 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001412719 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_025877 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AK007476 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK010088 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK158821 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK191165 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK197338 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK198167 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK198493 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK199511 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK199713 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK199957 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK199959 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK206310 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK207526 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK207800 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK209416 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK210726 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK210735 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK212423 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK217303 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK219653 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC017139 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC060049 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC072660 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC079539 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466537 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CT571247 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CX566083 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  W35874 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSMUST00000040280   ⟹   ENSMUSP00000040198
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1757,350,711 - 57,366,863 (-)Ensembl
GRCm38.p6 Ensembl1757,043,711 - 57,059,863 (-)Ensembl
Ensembl Acc Id: ENSMUST00000163442   ⟹   ENSMUSP00000132962
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1757,352,199 - 57,359,824 (-)Ensembl
GRCm38.p6 Ensembl1757,045,199 - 57,052,824 (-)Ensembl
Ensembl Acc Id: ENSMUST00000165187
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1757,363,236 - 57,366,819 (-)Ensembl
GRCm38.p6 Ensembl1757,056,236 - 57,059,819 (-)Ensembl
Ensembl Acc Id: ENSMUST00000170015   ⟹   ENSMUSP00000132169
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1757,352,485 - 57,360,829 (-)Ensembl
GRCm38.p6 Ensembl1757,045,485 - 57,053,829 (-)Ensembl
Ensembl Acc Id: ENSMUST00000171128   ⟹   ENSMUSP00000129354
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1757,354,195 - 57,362,385 (-)Ensembl
GRCm38.p6 Ensembl1757,047,195 - 57,055,385 (-)Ensembl
Ensembl Acc Id: ENSMUST00000171528   ⟹   ENSMUSP00000128348
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1757,354,051 - 57,360,582 (-)Ensembl
GRCm38.p6 Ensembl1757,047,051 - 57,053,582 (-)Ensembl
RefSeq Acc Id: NM_001379067   ⟹   NP_001365996
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391757,350,726 - 57,366,842 (-)NCBI
GRCm381757,043,726 - 57,059,842 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001379068   ⟹   NP_001365997
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391757,354,004 - 57,366,842 (-)NCBI
GRCm381757,047,004 - 57,059,842 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001379069   ⟹   NP_001365998
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391757,350,726 - 57,366,842 (-)NCBI
GRCm381757,043,726 - 57,059,842 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001379070   ⟹   NP_001365999
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391757,350,726 - 57,366,842 (-)NCBI
GRCm381757,043,726 - 57,059,842 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001412719   ⟹   NP_001399648
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391757,350,726 - 57,366,842 (-)NCBI
RefSeq Acc Id: NM_025877   ⟹   NP_080153
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391757,350,711 - 57,366,863 (-)NCBI
GRCm381757,043,711 - 57,059,863 (-)NCBI
MGSCv371757,183,134 - 57,199,286 (-)RGD
Celera1761,391,640 - 61,407,783 (-)RGD
cM Map17 ENTREZGENE
Sequence:
RefSeq Acc Id: NP_080153   ⟸   NM_025877
- Peptide Label: isoform 1
- UniProtKB: Q6GQS1 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001365998   ⟸   NM_001379069
- Peptide Label: isoform 4
RefSeq Acc Id: NP_001365996   ⟸   NM_001379067
- Peptide Label: isoform 2
RefSeq Acc Id: NP_001365999   ⟸   NM_001379070
- Peptide Label: isoform 5
RefSeq Acc Id: NP_001365997   ⟸   NM_001379068
- Peptide Label: isoform 3
Ensembl Acc Id: ENSMUSP00000132169   ⟸   ENSMUST00000170015
Ensembl Acc Id: ENSMUSP00000132962   ⟸   ENSMUST00000163442
Ensembl Acc Id: ENSMUSP00000040198   ⟸   ENSMUST00000040280
Ensembl Acc Id: ENSMUSP00000128348   ⟸   ENSMUST00000171528
Ensembl Acc Id: ENSMUSP00000129354   ⟸   ENSMUST00000171128
RefSeq Acc Id: NP_001399648   ⟸   NM_001412719
- Peptide Label: isoform 6
Protein Domains
EF-hand

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q6GQS1-F1-model_v2 AlphaFold Q6GQS1 1-467 view protein structure

Promoters
RGD ID:13676566
Promoter ID:EPDNEW_M22432
Type:initiation region
Name:Slc25a23_1
Description:Mus musculus solute carrier family 25 (mitochondrial carrier;phosphate carrier), member 23 , mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm381757,059,832 - 57,059,892EPDNEW
RGD ID:6828683
Promoter ID:MM_KWN:23930
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Brain,   Kidney,   Liver,   Lung
Transcripts:NM_025877,   UC008DDV.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361757,199,601 - 57,200,112 (-)MPROMDB

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:1914222 AgrOrtholog
Ensembl Genes ENSMUSG00000046329 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000040280 ENTREZGENE
  ENSMUST00000040280.14 UniProtKB/Swiss-Prot
  ENSMUST00000163442.8 UniProtKB/TrEMBL
  ENSMUST00000170015.8 UniProtKB/TrEMBL
  ENSMUST00000171128.2 UniProtKB/TrEMBL
  ENSMUST00000171528.2 UniProtKB/TrEMBL
Gene3D-CATH 1.50.40.10 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  EF-hand UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro EF-hand-dom_pair UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  EF_Hand_1_Ca_BS UniProtKB/Swiss-Prot
  EF_hand_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Mit_carrier UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Mitochondrial_sb/sol_carrier UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Mt_carrier_dom_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:66972 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
MGD MGI:1914222 ENTREZGENE
NCBI Gene 66972 ENTREZGENE
PANTHER SOLUTE CARRIER FAMILY 25 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam EF-hand_7 UniProtKB/Swiss-Prot
  Mito_carr UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Slc25a23 PhenoGen
PRINTS MITOCARRIER UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PROSITE EF_HAND_1 UniProtKB/Swiss-Prot
  EF_HAND_2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SOLCAR UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
SMART EFh UniProtKB/Swiss-Prot
Superfamily-SCOP SSF103506 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SSF47473 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt F6X0P2_MOUSE UniProtKB/TrEMBL
  F6XQ75_MOUSE UniProtKB/TrEMBL
  F7ANR8_MOUSE UniProtKB/TrEMBL
  F7BBH5_MOUSE UniProtKB/TrEMBL
  Q6GQS1 ENTREZGENE
  Q9D6Q7_MOUSE UniProtKB/TrEMBL
  Q9D908_MOUSE UniProtKB/TrEMBL
  SCMC3_MOUSE UniProtKB/Swiss-Prot