Rims1 (regulating synaptic membrane exocytosis 1) - Rat Genome Database

Send us a Message



Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Gene: Rims1 (regulating synaptic membrane exocytosis 1) Mus musculus
Analyze
Symbol: Rims1
Name: regulating synaptic membrane exocytosis 1
RGD ID: 1558300
MGI Page MGI
Description: Enables transmembrane transporter binding activity. A structural constituent of presynaptic active zone. Involved in several processes, including neurotransmitter secretion; regulation of calcium-dependent activation of synaptic vesicle fusion; and regulation of nervous system process. Acts upstream of or within calcium ion-regulated exocytosis of neurotransmitter; regulation of long-term neuronal synaptic plasticity; and regulation of membrane potential. Located in inhibitory synapse; postsynaptic density; and vesicle. Is active in GABA-ergic synapse; glutamatergic synapse; and presynaptic active zone cytoplasmic component. Is extrinsic component of presynaptic active zone membrane. Is expressed in brain and cerebellum. Orthologous to human RIMS1 (regulating synaptic membrane exocytosis 1).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: C030033M19Rik; KIAA0340; mKIAA0340; rab-3-interacting molecule 1; rab-3-interacting protein 1; Rab3 effector; Rab3 interacting protein 1; rab3-interacting molecule 1; rab3-interacting protein 1; Rab3ip1; regulating synaptic membrane exocytosis 1 beta; regulating synaptic membrane exocytosis protein 1; RI; Rim; RIM 1; RIM1; RIM1a; RIM1alpha; Serg1; synaptic exocytosis regulator 1
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39122,356,196 - 22,845,239 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl122,356,475 - 22,845,203 (-)EnsemblGRCm39 Ensembl
GRCm38122,285,972 - 22,806,158 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl122,286,251 - 22,805,994 (-)EnsemblGRCm38mm10GRCm38
MGSCv37122,278,503 - 22,422,924 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv37122,475,024 - 22,812,563 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36122,271,058 - 22,414,692 (-)NCBIMGSCv36mm8
Celera122,160,697 - 22,651,999 (-)NCBICelera
Cytogenetic Map1A5NCBI
cM Map18.54NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Functional annotation of a full-length mouse cDNA collection. Kawai J, etal., Nature. 2001 Feb 8;409(6821):685-90.
2. MGDs mouse GO annotations MGD data from the GO Consortium
3. MGD IEA MGD IEA
4. Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73.
5. OMIM Disease Annotation Pipeline OMIM Disease Annotation Pipeline
6. Mouse MP Annotation Import Pipeline RGD automated import pipeline
7. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
8. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
9. RIM1alpha forms a protein scaffold for regulating neurotransmitter release at the active zone. Schoch S, etal., Nature 2002 Jan 17;415(6869):321-6.
Additional References at PubMed
PMID:8889548   PMID:10349636   PMID:11042159   PMID:11056535   PMID:11076861   PMID:11431472   PMID:11797010   PMID:12477932   PMID:12578829   PMID:14532002   PMID:15066271   PMID:15207234  
PMID:15330860   PMID:15543142   PMID:15967982   PMID:16141072   PMID:16141073   PMID:16452087   PMID:16525048   PMID:16701208   PMID:16704978   PMID:16987237   PMID:17114649   PMID:17124501  
PMID:17237123   PMID:17496890   PMID:17553427   PMID:17803915   PMID:18184568   PMID:18287559   PMID:18495360   PMID:18690027   PMID:18799693   PMID:18799741   PMID:18815362   PMID:19036990  
PMID:19074017   PMID:19144838   PMID:19723784   PMID:19812333   PMID:20164339   PMID:20392954   PMID:20452978   PMID:21076424   PMID:21144999   PMID:21241895   PMID:21262468   PMID:21262469  
PMID:21267068   PMID:21849565   PMID:21873635   PMID:22103334   PMID:22553025   PMID:22753485   PMID:22956829   PMID:23712261   PMID:23999086   PMID:24036110   PMID:25155955   PMID:25240052  
PMID:25343783   PMID:25730884   PMID:26034270   PMID:26400943   PMID:27537483   PMID:27537484   PMID:28377503   PMID:28445587   PMID:28598330   PMID:28607399   PMID:28671696   PMID:28673385  
PMID:28701482   PMID:28706196   PMID:29033205   PMID:29398114   PMID:29606581   PMID:29802202   PMID:29891949   PMID:30559150   PMID:30995482   PMID:31486769   PMID:31679900   PMID:32027825  
PMID:32521280   PMID:32755572   PMID:33139401   PMID:33230847   PMID:33539324   PMID:34706221   PMID:34767769   PMID:35176221   PMID:35443170   PMID:35584679   PMID:36130490   PMID:36398873  
PMID:36417873   PMID:36579890   PMID:37142655   PMID:37159499   PMID:37770450   PMID:39160372  


Genomics

Comparative Map Data
Rims1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39122,356,196 - 22,845,239 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl122,356,475 - 22,845,203 (-)EnsemblGRCm39 Ensembl
GRCm38122,285,972 - 22,806,158 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl122,286,251 - 22,805,994 (-)EnsemblGRCm38mm10GRCm38
MGSCv37122,278,503 - 22,422,924 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv37122,475,024 - 22,812,563 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36122,271,058 - 22,414,692 (-)NCBIMGSCv36mm8
Celera122,160,697 - 22,651,999 (-)NCBICelera
Cytogenetic Map1A5NCBI
cM Map18.54NCBI
RIMS1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38671,886,550 - 72,403,145 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl671,886,550 - 72,403,150 (+)EnsemblGRCh38hg38GRCh38
GRCh37672,596,253 - 73,112,847 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36672,653,371 - 73,169,229 (+)NCBINCBI36Build 36hg18NCBI36
Build 34672,653,447 - 73,167,137NCBI
Celera672,990,111 - 73,506,277 (+)NCBICelera
Cytogenetic Map6q13NCBI
HuRef669,794,715 - 70,311,090 (+)NCBIHuRef
CHM1_1672,762,989 - 73,279,548 (+)NCBICHM1_1
T2T-CHM13v2.0673,067,717 - 73,580,721 (+)NCBIT2T-CHM13v2.0
Rims1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8932,193,352 - 32,692,998 (-)NCBIGRCr8
mRatBN7.2924,696,959 - 25,196,404 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl924,698,854 - 25,196,631 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx933,205,759 - 33,705,668 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0938,311,750 - 38,811,445 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0936,628,202 - 37,133,961 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0928,440,408 - 28,973,246 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl928,442,229 - 28,973,246 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0927,284,845 - 27,813,498 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4921,089,088 - 21,594,679 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1921,090,501 - 21,596,093 (-)NCBI
Celera922,268,968 - 22,762,652 (-)NCBICelera
Cytogenetic Map9q13NCBI
Rims1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554886,936,952 - 7,197,022 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554886,999,128 - 7,196,583 (+)NCBIChiLan1.0ChiLan1.0
RIMS1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2591,867,737 - 92,384,257 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1689,793,234 - 90,309,366 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0669,714,807 - 70,231,260 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1673,304,152 - 73,523,422 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl673,008,176 - 73,523,422 (+)Ensemblpanpan1.1panPan2
RIMS1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11234,473,974 - 34,661,893 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1234,474,033 - 34,659,410 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1234,042,997 - 34,520,866 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01234,724,669 - 35,202,130 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1234,724,007 - 35,202,201 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11234,260,108 - 34,737,956 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01234,298,396 - 34,775,746 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01234,408,939 - 34,886,369 (+)NCBIUU_Cfam_GSD_1.0
Rims1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494669,448,844 - 69,892,776 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049366183,606,524 - 4,047,711 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049366183,678,400 - 4,047,994 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
RIMS1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl151,785,495 - 52,244,934 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1151,785,140 - 52,246,456 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2158,399,458 - 58,584,713 (+)NCBISscrofa10.2Sscrofa10.2susScr3
RIMS1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1172,690,430 - 3,176,794 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl172,690,418 - 3,176,738 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_0236660588,621,932 - 9,124,698 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0

Variants

.
Variants in Rims1
29009 total Variants
miRNA Target Status (No longer updated)

Predicted Target Of
Summary Value
Count of predictions:4824
Count of miRNA genes:619
Interacting mature miRNAs:763
Transcripts:ENSMUST00000081544, ENSMUST00000097808, ENSMUST00000097809, ENSMUST00000097810, ENSMUST00000097811, ENSMUST00000115273, ENSMUST00000164877
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
11039528Ccc3_mcolitis susceptibility in the Collaborative Cross 3 (mouse)13680142195051546Mouse
1301011Cplaq4_mcircadian period of locomotor activity 4 (mouse)Not determined1967344243673601Mouse
1301073Orch5_mautoimmune orchitis resistance 5 (mouse)Not determined11906535153065454Mouse
1301275Sle10_msystematic lupus erythematosus susceptibility 10 (mouse)Not determined1288219436882352Mouse
15092046Wngrme1_mweek nine growth rate, maternal effect 1 (mouse)1328014237782236Mouse
1301370Adip1_madiposity 1 (mouse)Not determined1288219436882352Mouse
13824984Twq5_mtestis weight QTL 5 (mouse)13069992184732197Mouse
15092044Wtgrme1_mweek ten growth rate, maternal effect 1 (mouse)1328014237782236Mouse
1301240Sluc15_msusceptibility to lung cancer 15 (mouse)Not determined11906535153065454Mouse
1301471Obq2_mobesity QTL 2 (mouse)Not determined1394162037941887Mouse
14700685Civq2_mcerebral infarct volume QTL 2 (mouse)11134048245340482Mouse
1301756Pgia1_mproteoglycan induced arthritis 1 (mouse)Not determined11906535153065454Mouse
1301891Alcp25_malcohol preference locus 25 (mouse)Not determined1125203185Mouse
1300834Cia20_mcollagen induced arthritis 20 (mouse)Not determined1125203185Mouse
15092055Lgrme1_mlate growth rate, maternal effect 1 (mouse)1328014237782236Mouse
4141646Fecq3_mfecundity QTL 3 (mouse)Not determined11291692026517685Mouse
12880407V125Dq2_mvitamin D active form serum level QTL 2 (mouse)11933908153339081Mouse
15092050Wsegrme1_mweek seven growth rate, maternal effect 1 (mouse)1328014237782236Mouse
15092051Wegrme1_mweek eight growth rate, maternal effect 1 (mouse)1328014237782236Mouse
15092048Wsigrme1_mweek six growth rate, maternal effect 1 (mouse)1328014237782236Mouse
1301482Morph1_mmorphine antinociception 1 (mouse)Not determined1130367747Mouse
10043970Obq23_mobesity QTL 23 (mouse)Not determined1501266539012665Mouse
10412226Alpq4_malcohol preference QTL 4 (mouse)Not determined1122976684Mouse

Markers in Region
26.MMHAP56FRA11.seq  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38122,757,908 - 22,758,063UniSTSGRCm38
MGSCv37122,764,747 - 22,764,902UniSTSGRCm37
Celera122,601,054 - 22,601,209UniSTS
Cytogenetic Map1A5UniSTS
Whitehead_YAC1 UniSTS
D12Mit63  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38122,669,359 - 22,669,519UniSTSGRCm38
MGSCv37122,676,198 - 22,676,358UniSTSGRCm37
Celera122,511,232 - 22,511,406UniSTS
Cytogenetic Map1A5UniSTS
cM Map1219.0UniSTS
cM Map1 UniSTS
Whitehead Genetic1216.4UniSTS
Whitehead/MRC_RH1424.52UniSTS
D1Ertd228e  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38122,307,521 - 22,307,724UniSTSGRCm38
MGSCv37122,297,602 - 22,297,805UniSTSGRCm37
Celera122,179,531 - 22,179,738UniSTS
Cytogenetic Map1A5UniSTS
cM Map113.0UniSTS
fc33b03.x1  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Celera122,510,717 - 22,511,302UniSTS
Cytogenetic Map1A5UniSTS


Expression

RNA-SEQ Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001012623 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001012624 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001012625 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_053270 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_183018 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036153963 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036153973 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036153980 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036154015 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036154026 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036154043 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036154055 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036154075 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036154086 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036154101 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036154130 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036154141 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036154151 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036154160 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036154178 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036154195 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036154205 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036154227 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036154235 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036154243 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036154248 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036154256 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036154267 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036154285 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036154297 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036154306 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036154314 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036154326 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036154343 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036154361 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036154371 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036154384 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036154396 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036154403 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036154408 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036154410 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036154411 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036154414 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036154426 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036154432 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036154433 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036154438 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036154447 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036154452 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036154458 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AB162895 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AB162896 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AB162897 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC117188 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC125522 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC130211 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC147129 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC174648 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AEKQ02040097 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AEKQ02040098 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AJ310531 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK021118 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK090169 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK134597 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK162935 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK220335 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AY356534 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AY356535 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AY356536 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AY356537 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AY356538 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC016274 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC024828 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC037619 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC055294 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466536 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FJ472653 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSMUST00000081544   ⟹   ENSMUSP00000080259
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl122,356,475 - 22,844,805 (-)Ensembl
GRCm38.p6 Ensembl122,286,251 - 22,805,724 (-)Ensembl
Ensembl Acc Id: ENSMUST00000097808   ⟹   ENSMUSP00000095417
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl122,358,646 - 22,844,805 (-)Ensembl
GRCm38.p6 Ensembl122,468,191 - 22,805,724 (-)Ensembl
Ensembl Acc Id: ENSMUST00000097809   ⟹   ENSMUSP00000095418
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl122,356,475 - 22,844,805 (-)Ensembl
GRCm38.p6 Ensembl122,286,251 - 22,805,724 (-)Ensembl
Ensembl Acc Id: ENSMUST00000097810   ⟹   ENSMUSP00000095419
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl122,286,251 - 22,805,724 (-)Ensembl
Ensembl Acc Id: ENSMUST00000097811   ⟹   ENSMUSP00000095420
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl122,286,251 - 22,805,724 (-)Ensembl
Ensembl Acc Id: ENSMUST00000115273   ⟹   ENSMUSP00000110928
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl122,356,475 - 22,845,203 (-)Ensembl
GRCm38.p6 Ensembl122,286,251 - 22,805,724 (-)Ensembl
Ensembl Acc Id: ENSMUST00000164877   ⟹   ENSMUSP00000131808
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl122,357,139 - 22,386,029 (-)Ensembl
GRCm38.p6 Ensembl122,286,915 - 22,315,805 (-)Ensembl
Ensembl Acc Id: ENSMUST00000185942   ⟹   ENSMUSP00000140963
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl122,288,422 - 22,432,843 (-)Ensembl
Ensembl Acc Id: ENSMUST00000218140   ⟹   ENSMUSP00000151404
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl122,533,955 - 22,805,994 (-)Ensembl
Ensembl Acc Id: ENSMUST00000239255   ⟹   ENSMUSP00000159233
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl122,522,235 - 22,551,610 (-)Ensembl
GRCm38.p6 Ensembl122,483,154 - 22,512,529 (-)Ensembl
Ensembl Acc Id: ENSMUST00000239339
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl122,507,272 - 22,548,503 (-)Ensembl
GRCm38.p6 Ensembl122,468,191 - 22,509,422 (-)Ensembl
RefSeq Acc Id: NM_001012623   ⟹   NP_001012641
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39122,356,196 - 22,845,239 (-)NCBI
GRCm38122,285,972 - 22,806,158 (-)NCBI
MGSCv37122,475,024 - 22,812,563 (-)RGD
Celera122,160,697 - 22,651,999 (-)RGD
cM Map1 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_001012624   ⟹   NP_001012642
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39122,356,196 - 22,845,239 (-)NCBI
GRCm38122,285,972 - 22,806,158 (-)NCBI
MGSCv37122,475,024 - 22,812,563 (-)RGD
Celera122,160,697 - 22,651,999 (-)RGD
cM Map1 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_001012625   ⟹   NP_001012643
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39122,356,196 - 22,845,239 (-)NCBI
GRCm38122,285,972 - 22,806,158 (-)NCBI
MGSCv37122,475,024 - 22,812,563 (-)RGD
Celera122,160,697 - 22,651,999 (-)RGD
cM Map1 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_053270   ⟹   NP_444500
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39122,356,196 - 22,845,239 (-)NCBI
GRCm38122,285,972 - 22,806,158 (-)NCBI
MGSCv37122,475,024 - 22,812,563 (-)RGD
Celera122,160,697 - 22,651,999 (-)RGD
cM Map1 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_183018   ⟹   NP_898839
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39122,356,196 - 22,845,239 (-)NCBI
GRCm38122,285,972 - 22,806,158 (-)NCBI
MGSCv37122,475,024 - 22,812,563 (-)RGD
Celera122,160,697 - 22,651,999 (-)RGD
cM Map1 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_036153963   ⟹   XP_036009856
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39122,356,463 - 22,844,881 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036153973   ⟹   XP_036009866
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39122,356,474 - 22,844,881 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036153980   ⟹   XP_036009873
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39122,356,474 - 22,844,881 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036154015   ⟹   XP_036009908
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39122,356,474 - 22,844,881 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036154026   ⟹   XP_036009919
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39122,356,474 - 22,844,881 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036154043   ⟹   XP_036009936
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39122,356,474 - 22,844,881 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036154055   ⟹   XP_036009948
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39122,356,474 - 22,844,881 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036154075   ⟹   XP_036009968
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39122,356,474 - 22,844,881 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036154086   ⟹   XP_036009979
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39122,356,474 - 22,844,881 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036154101   ⟹   XP_036009994
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39122,356,474 - 22,844,881 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036154130   ⟹   XP_036010023
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39122,356,474 - 22,844,881 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036154141   ⟹   XP_036010034
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39122,356,474 - 22,844,881 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036154151   ⟹   XP_036010044
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39122,356,474 - 22,844,881 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036154160   ⟹   XP_036010053
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39122,356,474 - 22,844,881 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036154178   ⟹   XP_036010071
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39122,356,474 - 22,844,881 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036154195   ⟹   XP_036010088
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39122,356,474 - 22,844,881 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036154205   ⟹   XP_036010098
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39122,356,474 - 22,844,881 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036154227   ⟹   XP_036010120
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39122,356,474 - 22,844,881 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036154235   ⟹   XP_036010128
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39122,356,474 - 22,844,881 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036154243   ⟹   XP_036010136
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39122,356,474 - 22,844,881 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036154248   ⟹   XP_036010141
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39122,356,463 - 22,844,881 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036154256   ⟹   XP_036010149
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39122,356,474 - 22,844,881 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036154267   ⟹   XP_036010160
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39122,356,474 - 22,844,881 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036154285   ⟹   XP_036010178
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39122,356,474 - 22,844,881 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036154297   ⟹   XP_036010190
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39122,356,474 - 22,844,881 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036154306   ⟹   XP_036010199
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39122,356,463 - 22,844,881 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036154314   ⟹   XP_036010207
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39122,356,463 - 22,844,881 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036154326   ⟹   XP_036010219
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39122,356,463 - 22,844,881 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036154343   ⟹   XP_036010236
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39122,356,463 - 22,844,881 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036154361   ⟹   XP_036010254
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39122,356,474 - 22,551,800 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036154371   ⟹   XP_036010264
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39122,356,474 - 22,551,784 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036154384   ⟹   XP_036010277
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39122,356,474 - 22,551,760 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036154396   ⟹   XP_036010289
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39122,356,474 - 22,551,783 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036154403   ⟹   XP_036010296
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39122,356,474 - 22,548,525 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036154408   ⟹   XP_036010301
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39122,356,474 - 22,551,754 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036154410   ⟹   XP_036010303
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39122,356,474 - 22,551,761 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036154411   ⟹   XP_036010304
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39122,356,474 - 22,551,759 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036154414   ⟹   XP_036010307
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39122,356,474 - 22,551,748 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036154426   ⟹   XP_036010319
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39122,356,474 - 22,551,750 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036154432   ⟹   XP_036010325
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39122,356,474 - 22,551,743 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036154433   ⟹   XP_036010326
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39122,356,474 - 22,551,747 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036154438   ⟹   XP_036010331
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39122,356,196 - 22,551,806 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036154447   ⟹   XP_036010340
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39122,356,196 - 22,551,802 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036154452   ⟹   XP_036010345
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39122,356,196 - 22,389,299 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036154458   ⟹   XP_036010351
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39122,356,463 - 22,844,881 (-)NCBI
Sequence:
Protein Sequences
Protein RefSeqs NP_001012641 (Get FASTA)   NCBI Sequence Viewer  
  NP_001012642 (Get FASTA)   NCBI Sequence Viewer  
  NP_001012643 (Get FASTA)   NCBI Sequence Viewer  
  NP_444500 (Get FASTA)   NCBI Sequence Viewer  
  NP_898839 (Get FASTA)   NCBI Sequence Viewer  
  XP_036009856 (Get FASTA)   NCBI Sequence Viewer  
  XP_036009866 (Get FASTA)   NCBI Sequence Viewer  
  XP_036009873 (Get FASTA)   NCBI Sequence Viewer  
  XP_036009908 (Get FASTA)   NCBI Sequence Viewer  
  XP_036009919 (Get FASTA)   NCBI Sequence Viewer  
  XP_036009936 (Get FASTA)   NCBI Sequence Viewer  
  XP_036009948 (Get FASTA)   NCBI Sequence Viewer  
  XP_036009968 (Get FASTA)   NCBI Sequence Viewer  
  XP_036009979 (Get FASTA)   NCBI Sequence Viewer  
  XP_036009994 (Get FASTA)   NCBI Sequence Viewer  
  XP_036010023 (Get FASTA)   NCBI Sequence Viewer  
  XP_036010034 (Get FASTA)   NCBI Sequence Viewer  
  XP_036010044 (Get FASTA)   NCBI Sequence Viewer  
  XP_036010053 (Get FASTA)   NCBI Sequence Viewer  
  XP_036010071 (Get FASTA)   NCBI Sequence Viewer  
  XP_036010088 (Get FASTA)   NCBI Sequence Viewer  
  XP_036010098 (Get FASTA)   NCBI Sequence Viewer  
  XP_036010120 (Get FASTA)   NCBI Sequence Viewer  
  XP_036010128 (Get FASTA)   NCBI Sequence Viewer  
  XP_036010136 (Get FASTA)   NCBI Sequence Viewer  
  XP_036010141 (Get FASTA)   NCBI Sequence Viewer  
  XP_036010149 (Get FASTA)   NCBI Sequence Viewer  
  XP_036010160 (Get FASTA)   NCBI Sequence Viewer  
  XP_036010178 (Get FASTA)   NCBI Sequence Viewer  
  XP_036010190 (Get FASTA)   NCBI Sequence Viewer  
  XP_036010199 (Get FASTA)   NCBI Sequence Viewer  
  XP_036010207 (Get FASTA)   NCBI Sequence Viewer  
  XP_036010219 (Get FASTA)   NCBI Sequence Viewer  
  XP_036010236 (Get FASTA)   NCBI Sequence Viewer  
  XP_036010254 (Get FASTA)   NCBI Sequence Viewer  
  XP_036010264 (Get FASTA)   NCBI Sequence Viewer  
  XP_036010277 (Get FASTA)   NCBI Sequence Viewer  
  XP_036010289 (Get FASTA)   NCBI Sequence Viewer  
  XP_036010296 (Get FASTA)   NCBI Sequence Viewer  
  XP_036010301 (Get FASTA)   NCBI Sequence Viewer  
  XP_036010303 (Get FASTA)   NCBI Sequence Viewer  
  XP_036010304 (Get FASTA)   NCBI Sequence Viewer  
  XP_036010307 (Get FASTA)   NCBI Sequence Viewer  
  XP_036010319 (Get FASTA)   NCBI Sequence Viewer  
  XP_036010325 (Get FASTA)   NCBI Sequence Viewer  
  XP_036010326 (Get FASTA)   NCBI Sequence Viewer  
  XP_036010331 (Get FASTA)   NCBI Sequence Viewer  
  XP_036010340 (Get FASTA)   NCBI Sequence Viewer  
  XP_036010345 (Get FASTA)   NCBI Sequence Viewer  
  XP_036010351 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAH55294 (Get FASTA)   NCBI Sequence Viewer  
  AAR14797 (Get FASTA)   NCBI Sequence Viewer  
  AAR14798 (Get FASTA)   NCBI Sequence Viewer  
  AAR14799 (Get FASTA)   NCBI Sequence Viewer  
  AAR14800 (Get FASTA)   NCBI Sequence Viewer  
  AAR14801 (Get FASTA)   NCBI Sequence Viewer  
  ACK58674 (Get FASTA)   NCBI Sequence Viewer  
  BAD32691 (Get FASTA)   NCBI Sequence Viewer  
  BAD32692 (Get FASTA)   NCBI Sequence Viewer  
  BAD32693 (Get FASTA)   NCBI Sequence Viewer  
  BAD90402 (Get FASTA)   NCBI Sequence Viewer  
  BAE22200 (Get FASTA)   NCBI Sequence Viewer  
  CAC32041 (Get FASTA)   NCBI Sequence Viewer  
  EDL14395 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSMUSP00000080259
  ENSMUSP00000095417
  ENSMUSP00000095418
  ENSMUSP00000110928
  ENSMUSP00000131808
GenBank Protein Q99NE5 (Get FASTA)   NCBI Sequence Viewer  
RefSeq Acc Id: NP_001012643   ⟸   NM_001012625
- Peptide Label: isoform 5
- UniProtKB: F6TZK4 (UniProtKB/TrEMBL),   F6VBV0 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001012642   ⟸   NM_001012624
- Peptide Label: isoform 4
- UniProtKB: F6VBV0 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001012641   ⟸   NM_001012623
- Peptide Label: isoform 3
- UniProtKB: F6VBV0 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_898839   ⟸   NM_183018
- Peptide Label: isoform 2
- UniProtKB: F6Y0S3 (UniProtKB/TrEMBL),   F6VBV0 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_444500   ⟸   NM_053270
- Peptide Label: isoform 1
- UniProtKB: E9PWP6 (UniProtKB/TrEMBL),   F6VBV0 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSMUSP00000151404   ⟸   ENSMUST00000218140
Ensembl Acc Id: ENSMUSP00000131808   ⟸   ENSMUST00000164877
Ensembl Acc Id: ENSMUSP00000159233   ⟸   ENSMUST00000239255
Ensembl Acc Id: ENSMUSP00000140963   ⟸   ENSMUST00000185942
Ensembl Acc Id: ENSMUSP00000080259   ⟸   ENSMUST00000081544
Ensembl Acc Id: ENSMUSP00000110928   ⟸   ENSMUST00000115273
Ensembl Acc Id: ENSMUSP00000095420   ⟸   ENSMUST00000097811
Ensembl Acc Id: ENSMUSP00000095419   ⟸   ENSMUST00000097810
Ensembl Acc Id: ENSMUSP00000095417   ⟸   ENSMUST00000097808
Ensembl Acc Id: ENSMUSP00000095418   ⟸   ENSMUST00000097809
RefSeq Acc Id: XP_036010331   ⟸   XM_036154438
- Peptide Label: isoform X41
RefSeq Acc Id: XP_036010340   ⟸   XM_036154447
- Peptide Label: isoform X42
RefSeq Acc Id: XP_036010345   ⟸   XM_036154452
- Peptide Label: isoform X43
- UniProtKB: Q7TPL9 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_036010351   ⟸   XM_036154458
- Peptide Label: isoform X44
- UniProtKB: F6VBV0 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_036010236   ⟸   XM_036154343
- Peptide Label: isoform X28
RefSeq Acc Id: XP_036010219   ⟸   XM_036154326
- Peptide Label: isoform X27
- UniProtKB: F6VBV0 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_036010207   ⟸   XM_036154314
- Peptide Label: isoform X26
- UniProtKB: F6VBV0 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_036010199   ⟸   XM_036154306
- Peptide Label: isoform X25
- UniProtKB: F6VBV0 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_036010141   ⟸   XM_036154248
- Peptide Label: isoform X21
- UniProtKB: F6VBV0 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_036009856   ⟸   XM_036153963
- Peptide Label: isoform X1
- UniProtKB: F6VBV0 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_036010034   ⟸   XM_036154141
- Peptide Label: isoform X12
- UniProtKB: F6VBV0 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_036010023   ⟸   XM_036154130
- Peptide Label: isoform X11
- UniProtKB: F6VBV0 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_036010190   ⟸   XM_036154297
- Peptide Label: isoform X24
- UniProtKB: F6VBV0 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_036009968   ⟸   XM_036154075
- Peptide Label: isoform X8
- UniProtKB: F6VBV0 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_036009936   ⟸   XM_036154043
- Peptide Label: isoform X6
- UniProtKB: F6VBV0 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_036010128   ⟸   XM_036154235
- Peptide Label: isoform X19
- UniProtKB: F6VBV0 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_036009994   ⟸   XM_036154101
- Peptide Label: isoform X10
- UniProtKB: F6VBV0 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_036009908   ⟸   XM_036154015
- Peptide Label: isoform X4
- UniProtKB: F6VBV0 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_036010178   ⟸   XM_036154285
- Peptide Label: isoform X24
- UniProtKB: F6VBV0 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_036010160   ⟸   XM_036154267
- Peptide Label: isoform X23
- UniProtKB: F6VBV0 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_036009948   ⟸   XM_036154055
- Peptide Label: isoform X7
- UniProtKB: F6VBV0 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_036010149   ⟸   XM_036154256
- Peptide Label: isoform X22
- UniProtKB: F6VBV0 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_036010136   ⟸   XM_036154243
- Peptide Label: isoform X20
- UniProtKB: F6VBV0 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_036009873   ⟸   XM_036153980
- Peptide Label: isoform X3
- UniProtKB: F6VBV0 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_036010120   ⟸   XM_036154227
- Peptide Label: isoform X18
- UniProtKB: F6VBV0 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_036010098   ⟸   XM_036154205
- Peptide Label: isoform X17
- UniProtKB: F6VBV0 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_036010088   ⟸   XM_036154195
- Peptide Label: isoform X16
- UniProtKB: F6VBV0 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_036010071   ⟸   XM_036154178
- Peptide Label: isoform X15
- UniProtKB: F6VBV0 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_036009979   ⟸   XM_036154086
- Peptide Label: isoform X9
- UniProtKB: F6VBV0 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_036010053   ⟸   XM_036154160
- Peptide Label: isoform X14
- UniProtKB: F6VBV0 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_036009919   ⟸   XM_036154026
- Peptide Label: isoform X5
- UniProtKB: F6VBV0 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_036010044   ⟸   XM_036154151
- Peptide Label: isoform X13
- UniProtKB: F6VBV0 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_036009866   ⟸   XM_036153973
- Peptide Label: isoform X2
- UniProtKB: F6VBV0 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_036010254   ⟸   XM_036154361
- Peptide Label: isoform X29
RefSeq Acc Id: XP_036010264   ⟸   XM_036154371
- Peptide Label: isoform X30
RefSeq Acc Id: XP_036010289   ⟸   XM_036154396
- Peptide Label: isoform X32
RefSeq Acc Id: XP_036010303   ⟸   XM_036154410
- Peptide Label: isoform X35
RefSeq Acc Id: XP_036010277   ⟸   XM_036154384
- Peptide Label: isoform X31
RefSeq Acc Id: XP_036010304   ⟸   XM_036154411
- Peptide Label: isoform X36
RefSeq Acc Id: XP_036010301   ⟸   XM_036154408
- Peptide Label: isoform X34
RefSeq Acc Id: XP_036010319   ⟸   XM_036154426
- Peptide Label: isoform X38
RefSeq Acc Id: XP_036010307   ⟸   XM_036154414
- Peptide Label: isoform X37
RefSeq Acc Id: XP_036010326   ⟸   XM_036154433
- Peptide Label: isoform X40
RefSeq Acc Id: XP_036010325   ⟸   XM_036154432
- Peptide Label: isoform X39
- UniProtKB: Q3UYL2 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_036010296   ⟸   XM_036154403
- Peptide Label: isoform X33
Protein Domains
C2   FYVE-type   PDZ   RabBD   RIM zinc finger

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q99NE5-F1-model_v2 AlphaFold Q99NE5 1-1463 view protein structure

Promoters
RGD ID:6873300
Promoter ID:EPDNEW_M101
Type:initiation region
Name:Rims1_1
Description:Mus musculus regulating synaptic membrane exocytosis 1 , transcriptvariant 5, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M102  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38122,315,861 - 22,315,921EPDNEW
RGD ID:6873302
Promoter ID:EPDNEW_M102
Type:initiation region
Name:Rims1_2
Description:Mus musculus regulating synaptic membrane exocytosis 1 , transcriptvariant 5, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M101  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38122,509,357 - 22,509,417EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:2152971 AgrOrtholog
Ensembl Genes ENSMUSG00000041670 Ensembl, ENTREZGENE
Ensembl Transcript ENSMUST00000081544 ENTREZGENE
  ENSMUST00000097808 ENTREZGENE
  ENSMUST00000097809 ENTREZGENE
  ENSMUST00000115273 ENTREZGENE
  ENSMUST00000164877 ENTREZGENE
Gene3D-CATH 2.30.42.10 UniProtKB/Swiss-Prot
  2.60.40.150 UniProtKB/Swiss-Prot
  3.30.40.10 UniProtKB/Swiss-Prot
InterPro C2_dom UniProtKB/Swiss-Prot
  C2_domain_sf UniProtKB/Swiss-Prot
  PDZ UniProtKB/Swiss-Prot
  PDZ_sf UniProtKB/Swiss-Prot
  Rab_BD UniProtKB/Swiss-Prot
  Rim-like UniProtKB/Swiss-Prot
  RIM_Znf UniProtKB/Swiss-Prot
  Znf_FYVE-rel UniProtKB/Swiss-Prot
  Znf_FYVE_PHD UniProtKB/Swiss-Prot
  Znf_RING/FYVE/PHD UniProtKB/Swiss-Prot
KEGG Report mmu:116837 UniProtKB/Swiss-Prot
MGD MGI:2152971 ENTREZGENE
NCBI Gene 116837 ENTREZGENE
PANTHER PTHR12157 UniProtKB/Swiss-Prot
  REGULATING SYNAPTIC MEMBRANE EXOCYTOSIS PROTEIN 1 UniProtKB/Swiss-Prot
Pfam PDZ UniProtKB/Swiss-Prot
  PF00168 UniProtKB/Swiss-Prot
  RIM2a_ZnF UniProtKB/Swiss-Prot
PhenoGen Rims1 PhenoGen
PROSITE PDZ UniProtKB/Swiss-Prot
  PS50004 UniProtKB/Swiss-Prot
  RABBD UniProtKB/Swiss-Prot
  ZF_FYVE UniProtKB/Swiss-Prot
SMART PDZ UniProtKB/Swiss-Prot
  SM00239 UniProtKB/Swiss-Prot
Superfamily-SCOP SSF49562 UniProtKB/Swiss-Prot
  SSF50156 UniProtKB/Swiss-Prot
  SSF57903 UniProtKB/Swiss-Prot
UniProt A0A668KL79_MOUSE UniProtKB/TrEMBL
  B7UCC5_MOUSE UniProtKB/TrEMBL
  E9PWP6 ENTREZGENE, UniProtKB/TrEMBL
  F6TZK4 ENTREZGENE, UniProtKB/TrEMBL
  F6VBV0 ENTREZGENE, UniProtKB/TrEMBL
  F6Y0S3 ENTREZGENE, UniProtKB/TrEMBL
  Q3UYL2 ENTREZGENE, UniProtKB/TrEMBL
  Q7TPL9 ENTREZGENE, UniProtKB/TrEMBL
  Q99NE5 ENTREZGENE, UniProtKB/Swiss-Prot
UniProt Secondary Q5DU35 UniProtKB/Swiss-Prot
  Q5J8K0 UniProtKB/Swiss-Prot
  Q5J8K1 UniProtKB/Swiss-Prot
  Q5J8K2 UniProtKB/Swiss-Prot
  Q5J8K3 UniProtKB/Swiss-Prot
  Q5J8K4 UniProtKB/Swiss-Prot