Tspan18 (tetraspanin 18) - Rat Genome Database

Name: Tspan18
Creator: Rat Genome Database
License: Creative Commons CC BY 4.0
Keywords: Rat Gene RGD Genome

Advanced Search (OLGA)

Gene: Tspan18 (tetraspanin 18) Mus musculus

Analyze

Symbol:

Tspan18

Name:

tetraspanin 18

RGD ID:

1558172

MGI Page

MGI

Description:

Predicted to enable transmembrane transporter binding activity. Acts upstream of or within several processes, including calcium-ion regulated exocytosis; hemostasis; and inflammatory response. Predicted to be located in cell periphery. Predicted to be active in plasma membrane. Is expressed in several structures, including alimentary system; brain; genitourinary system; hemolymphoid system; and integumental system. Orthologous to human TSPAN18 (tetraspanin 18).

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

2610042G18Rik; 6720430O15; BB226562; RIKEN cDNA 2610042G18 gene; tetraspanin-18; tspan-18

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	TSPAN18 (tetraspanin 18)	HGNC	EggNOG, Ensembl, HGNC, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, Panther, PhylomeDB, Treefam
Rattus norvegicus (Norway rat):	Tspan18 (tetraspanin 18)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Tspan18 (tetraspanin 18)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	TSPAN18 (tetraspanin 18)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	TSPAN18 (tetraspanin 18)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Tspan18 (tetraspanin 18)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	TSPAN18 (tetraspanin 18)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	TSPAN18 (tetraspanin 18)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Tspan18 (tetraspanin 18)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Alliance orthologs ³
Rattus norvegicus (Norway rat):	Tspan18 (tetraspanin 18)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Homo sapiens (human):	TSPAN18 (tetraspanin 18)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	tspan18a (tetraspanin 18a)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid\|ZFIN)
Danio rerio (zebrafish):	tspan18b (tetraspanin 18b)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid\|ZFIN)
Drosophila melanogaster (fruit fly):	Tsp66E	Alliance	DIOPT (Ensembl Compara\|InParanoid\|OMA\|PANTHER\|SonicParanoid)
Caenorhabditis elegans (roundworm):	tsp-4	Alliance	DIOPT (Ensembl Compara\|InParanoid\|OMA\|PANTHER\|SonicParanoid)
Caenorhabditis elegans (roundworm):	tsp-5	Alliance	DIOPT (Ensembl Compara\|InParanoid\|OMA\|PANTHER\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	tspan18	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)

Latest Assembly:

GRCm39 - Mouse Genome Assembly GRCm39

Position:

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	2	93,032,105 - 93,164,898 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	2	93,032,105 - 93,164,850 (-)	Ensembl		GRCm39 Ensembl
GRCm38	2	93,201,760 - 93,334,551 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	2	93,201,760 - 93,334,505 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	2	93,041,917 - 93,174,644 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	2	93,002,599 - 93,135,289 (-)	NCBI		MGSCv36	mm8
Celera	2	94,597,454 - 94,729,881 (-)	NCBI		Celera
Cytogenetic Map	2	E1	NCBI
cM Map	2	51.37	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

intellectual disability (ISO)

schizophrenia (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

(-)-epigallocatechin 3-gallate (ISO)

2,2',4,4',5,5'-hexachlorobiphenyl (EXP)

2,2',5,5'-tetrachlorobiphenyl (EXP)

2,3,7,8-tetrachlorodibenzodioxine (EXP,ISO)

2-methylcholine (ISO)

4,4'-sulfonyldiphenol (ISO)

4-hydroxyphenyl retinamide (EXP)

6-propyl-2-thiouracil (ISO)

acrylamide (ISO)

aflatoxin B1 (ISO)

Aflatoxin B2 alpha (ISO)

amitrole (ISO)

antirheumatic drug (ISO)

atrazine (ISO)

benzo[a]pyrene (EXP,ISO)

benzo[b]fluoranthene (EXP)

benzo[e]pyrene (ISO)

Benzo[ghi]perylene (EXP)

Benzo[k]fluoranthene (EXP)

bisphenol A (EXP,ISO)

buta-1,3-diene (EXP)

butanal (ISO)

cadmium atom (ISO)

cadmium dichloride (ISO)

carbon nanotube (EXP)

CGP 52608 (ISO)

chlordecone (EXP)

chloroprene (EXP)

chrysene (EXP)

cisplatin (ISO)

copper atom (ISO)

copper(0) (ISO)

crocidolite asbestos (EXP)

Cuprizon (ISO)

DDE (ISO)

decabromodiphenyl ether (ISO)

dibenz[a,h]anthracene (EXP)

Dibutyl phosphate (ISO)

dioxygen (ISO)

dorsomorphin (ISO)

fipronil (ISO)

fulvestrant (ISO)

gentamycin (ISO)

glycidol (ISO)

hydralazine (ISO)

lead(0) (ISO)

lipopolysaccharide (ISO)

methapyrilene (ISO)

methimazole (ISO)

methoxychlor (ISO)

nickel atom (ISO)

ozone (EXP)

paracetamol (ISO)

PCB138 (EXP)

pentanal (ISO)

potassium chromate (ISO)

pregnenolone 16alpha-carbonitrile (ISO)

propanal (ISO)

S-(1,2-dichlorovinyl)-L-cysteine (ISO)

SB 431542 (ISO)

sodium arsenite (ISO)

sulfadimethoxine (ISO)

sunitinib (ISO)

tetraphene (EXP)

thioacetamide (ISO)

thiram (ISO)

titanium dioxide (EXP)

trichloroethene (ISO)

trichostatin A (ISO)

trimellitic anhydride (EXP)

triphenyl phosphate (ISO)

valproic acid (ISO)

vinclozolin (ISO)

zoledronic acid (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

calcium-ion regulated exocytosis (IMP)

establishment of localization in cell (IMP)

hemostasis (IMP)

inflammatory response (IMP)

protein localization to cell periphery (ISO)

regulation of sprouting angiogenesis (ISO,ISS)

regulation of store-operated calcium entry (ISO)

Cellular Component

cell periphery (ISO)

membrane (IEA)

plasma membrane (IBA)

Molecular Function

protein binding (ISO)

transmembrane transporter binding (ISO)

Phenotype Annotations Click to see Annotation Detail View

Mammalian Phenotype

abnormal hemostasis (IAGP)

decreased circulating glucose level (IEA)

decreased circulating serum albumin level (IEA)

decreased circulating von Willebrand factor level (IAGP)

decreased susceptibility to induced thrombosis (IAGP)

increased circulating alanine transaminase level (IEA)

increased fasting circulating glucose level (IEA)

increased mean corpuscular hemoglobin (IEA)

References

References - curated

#	Reference Title	Reference Citation
1.	Functional annotation of a full-length mouse cDNA collection.	Kawai J, etal., Nature. 2001 Feb 8;409(6821):685-90.
2.	MGDs mouse GO annotations	MGD data from the GO Consortium
3.	Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs.	Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73.
4.	Mouse MP Annotation Import Pipeline	RGD automated import pipeline
5.	ClinVar Automated Import and Annotation Pipeline	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
6.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

Additional References at PubMed

PMID:10349636	PMID:11042159	PMID:11076861	PMID:12477932	PMID:15489334	PMID:16141072	PMID:16141073	PMID:18291621	PMID:19000842	PMID:19906978	PMID:20562862	PMID:21267068
PMID:21873635	PMID:24194600	PMID:27626380	PMID:28700664	PMID:30573509	PMID:32447449	PMID:38355793

Genomics

Comparative Map Data

Tspan18
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	2	93,032,105 - 93,164,898 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	2	93,032,105 - 93,164,850 (-)	Ensembl		GRCm39 Ensembl
GRCm38	2	93,201,760 - 93,334,551 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	2	93,201,760 - 93,334,505 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	2	93,041,917 - 93,174,644 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	2	93,002,599 - 93,135,289 (-)	NCBI		MGSCv36	mm8
Celera	2	94,597,454 - 94,729,881 (-)	NCBI		Celera
Cytogenetic Map	2	E1	NCBI
cM Map	2	51.37	NCBI

TSPAN18
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	11	44,726,310 - 44,932,423 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	11	44,726,465 - 44,932,423 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	11	44,748,512 - 44,953,974 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	11	44,837,628 - 44,909,463 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Celera	11	44,932,703 - 45,100,673 (+)	NCBI		Celera
Cytogenetic Map	11	p11.2	NCBI
HuRef	11	44,496,710 - 44,664,644 (+)	NCBI		HuRef
CHM1_1	11	44,785,142 - 44,953,229 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	11	44,883,873 - 45,089,263 (+)	NCBI		T2T-CHM13v2.0

Tspan18
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	3	99,615,465 - 99,755,270 (-)	NCBI		GRCr8
mRatBN7.2	3	79,160,060 - 79,299,907 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	3	79,161,662 - 79,299,852 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	3	82,634,272 - 82,774,000 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	3	91,233,326 - 91,373,052 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	3	89,085,209 - 89,224,609 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	3	82,097,068 - 82,236,694 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	3	82,097,068 - 82,236,664 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	3	88,799,484 - 88,939,072 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	3	77,602,718 - 77,742,512 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
Celera	3	78,363,376 - 78,502,825 (-)	NCBI		Celera
Cytogenetic Map	3	q31	NCBI

Tspan18
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955422	2,833,130 - 2,871,460 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955422	2,833,124 - 2,871,460 (-)	NCBI	ChiLan1.0	ChiLan1.0

TSPAN18
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	9	46,940,695 - 47,144,819 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	11	46,947,103 - 47,148,202 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	11	44,686,159 - 44,890,196 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	11	45,180,395 - 45,384,114 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	11	45,349,629 - 45,384,101 (+)	Ensembl	panpan1.1		panPan2

TSPAN18
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	18	44,386,676 - 44,539,859 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	18	44,388,761 - 44,445,847 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	18	43,116,656 - 43,302,513 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	18	45,045,146 - 45,231,055 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	18	45,045,225 - 45,105,837 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	18	44,528,315 - 44,714,214 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	18	44,081,829 - 44,267,706 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	18	44,815,088 - 45,000,937 (-)	NCBI		UU_Cfam_GSD_1.0

Tspan18
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404947	21,730,017 - 21,776,978 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936562	3,843,780 - 3,857,679 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936562	3,842,035 - 3,968,555 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

TSPAN18
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	2	17,465,633 - 17,634,715 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	2	17,465,624 - 17,671,737 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	2	19,000,959 - 19,021,135 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

TSPAN18
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	1	20,418,064 - 20,628,756 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	1	20,419,131 - 20,442,651 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666038	117,663,040 - 117,866,186 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Tspan18
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624767	3,362,738 - 3,378,177 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624767	3,362,738 - 3,459,336 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in Tspan18
4644 total Variants

miRNA Target Status

Predicted Target Of

	Summary Value
Count of predictions:	1778
Count of miRNA genes:	684
Interacting mature miRNAs:	870
Transcripts:	ENSMUST00000028646, ENSMUST00000111265, ENSMUST00000152141, ENSMUST00000154951, ENSMUST00000181716
Prediction methods:	Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCm39)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
11038697	Ltpr2d_m	Leishmania tropica response 2d (mouse)					2	86095716	120095823	Mouse
11038698	Ltpr2c_m	Leishmania tropica response 2c (mouse)					2	86095716	120095823	Mouse
39128209	Lwq14_m	liver weight QTL 14 (mouse)					2	20897778	118894840	Mouse
1558738	W6q1_m	weight 6 weeks QTL 1 (mouse)			Not determined		2	20897778	118894840	Mouse
13824983	Vclq1_m	curvilinear velocity QTL 1 (mouse)					2	61830344	136841920	Mouse
1301909	Smdq2_m	segregation of mitochondrial DNA QTL 2 (mouse)			Not determined		2	92778465	126778607	Mouse
11528549	Sluc31_m	susceptibility to lung cancer 31 (mouse)					2	74524117	129213005	Mouse
4141236	Hbnr5_m	Heligmosomoides bakeri nematode resistance 5 (mouse)			Not determined			31214567	105143570	Mouse
1302174	Dssc2_m	dextran sodium sulfate induced colitis QTL2 (mouse)			Not determined		2	24224632	148700377	Mouse
1301405	Etohr_m	ethanol response acute (mouse)			Not determined		2	63005954	97006113	Mouse
1301660	Iba1_m	induction of brown adipocytes 1 (mouse)			Not determined		2	67647887	101648142	Mouse
1558915	W3q1_m	weight 3 weeks QTL 1 (mouse)			Not determined		2	20897778	118894840	Mouse
1301703	Bomd3_m	bone mineral density 3 (mouse)			Not determined		2	63005954	97006113	Mouse
11532731	Sluc31a_m	susceptibility to lung cancer 31a (mouse)					2	88015003	122015170	Mouse
1301834	Bits1_m	bitterness sensitivity 1 (mouse)			Not determined		2	87440643	121440778	Mouse
1301769	Orgwq2_m	organ weight QTL 2 (mouse)			Not determined		2	3887126	93421651	Mouse
1357454	Kidq1_m	kidney weight QTL 1 (mouse)			Not determined		2	20897778	118894840	Mouse
4141155	Plast2b_m	plasma plant sterol 2b (mouse)			Not determined		2	84013198	148522175	Mouse
1357577	Trmq3_m	T cell ratio modifier QTL 3 (mouse)			Not determined		2	60520612	119355518	Mouse
1558966	W10q9_m	weight 10 weeks QTL 9 (mouse)			Not determined		2	20897778	118894840	Mouse
4141854	T2dm2sa_m	type 2 diabetes mellitus 2 in SMXA RI mice (mouse)			Not determined		2	29307947	148374934	Mouse
1301873	Hsl1_m	hyperoxia susceptibility locus 1 (mouse)			Not determined		2	63570154	97570301	Mouse
1558901	Skmw8_m	skeletal muscle weight 8 (mouse)			Not determined		2	84008488	118008593	Mouse
1558899	Egq1_m	early growth QTL 1 (mouse)			Not determined		2	20897778	118894840	Mouse
1357681	Hrtq1_m	heart weight QTL 1 (mouse)			Not determined		2	20897778	118894840	Mouse
1300662	Etohila_m	ethanol induced locomotor activity (mouse)			Not determined		2	63005954	97006113	Mouse
1301109	Dntcs2_m	dental caries susceptibility 2 (mouse)			Not determined		2	40885493	114910165	Mouse
4141657	Mohg1_m	modifier of hg 1 (mouse)			Not determined		2	76678758	103095823	Mouse
1300852	Lmr14_m	leishmaniasis resistance 14 (mouse)			Not determined		2	86095716	120095823	Mouse
1357436	Splq1_m	spleen weight QTL 1 (mouse)			Not determined		2	20897778	118894840	Mouse
10053681	Lith24_m	lithogenic gene 24 (mouse)			Not determined		2	63005954	97006113	Mouse
1301882	Etohc2_m	ethanol consumption 2 (mouse)			Not determined		2	68724269	102724407	Mouse
1301048	Actre2_m	activity response to ethanol 2 (mouse)			Not determined		2	63005954	97006113	Mouse
10412082	Hylaq1_m	Hyperlocomotor activity related QTL 1 (mouse)			Not determined		2	84013198	148667470	Mouse
1357881	Estoq1_m	embryo survival total QTL 1 (mouse)			Not determined		2	20897778	118894840	Mouse
1301374	Cplaq7_m	circadian period of locomotor activity 7 (mouse)			Not determined		2	76421483	110421651	Mouse
5491197	Mobq5_m	multigenic obesity QTL 5 (mouse)			Not determined		2	65269746	162518926	Mouse
1301948	Elsgp3_m	elevated serum gp70 3 (mouse)			Not determined		2	68724269	102724407	Mouse
10043894	Bw22_m	body weight QTL 22 (mouse)			Not determined		2	80895334	114895334	Mouse
5491196	Mobq6_m	multigenic obesity QTL 6 (mouse)			Not determined		2	85724269	180896594	Mouse
15092054	Egrme5_m	early growth rate, maternal effect 5 (mouse)					2	82190187	118004745	Mouse
4142223	Femwf4_m	femur work to failure 4 (mouse)			Not determined			88143423	122143570	Mouse
1301344	Lith1_m	lithogenic gene 1 (mouse)			Not determined		2	45347635	145312647	Mouse
11049565	Lmr28g_m	leishmaniasis resistance 28g (mouse)					2	86095716	120095823	Mouse
13463482	Mchq17_m	mean corpuscular hemoglobin QTL 17 (mouse)					2	67647887	101648142	Mouse
4142088	Parms1_m	patched associated RMS 1 (mouse)			Not determined			74524117	114123532	Mouse
1301098	Cd8mts3_m	CD8 memory T cell subset 3 (mouse)			Not determined		2	91089974	125090104	Mouse
10044002	Hdl7_m	HDL level 7 (mouse)			Not determined		2	63005954	97006113	Mouse

Markers in Region

44.MMHAP12FLG5.seq

Mouse Assembly	Chr	Position (strand)	Source	JBrowse
GRCm38	2	93,243,281 - 93,243,439	UniSTS	GRCm38
MGSCv37	2	93,083,438 - 93,083,596	UniSTS	GRCm37
Celera	2	94,638,996 - 94,639,155	UniSTS
Cytogenetic Map	2	E1	UniSTS
Whitehead/MRC_RH	2	1286.58	UniSTS

BB226562

Mouse Assembly	Chr	Position (strand)	Source	JBrowse
GRCm38	2	93,311,334 - 93,311,449	UniSTS	GRCm38
MGSCv37	2	93,151,491 - 93,151,606	UniSTS	GRCm37
Celera	2	94,706,585 - 94,706,700	UniSTS
Cytogenetic Map	2	E1	UniSTS
Whitehead/MRC_RH	2	1285.96	UniSTS

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_183180	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006499474	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006499475	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006499476	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006499477	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_011239525	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AK011742	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK027999	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK032765	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK042573	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK049752	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK148554	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK171054	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AL691472	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BB659903	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC052169	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH466519	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSMUST00000028646 ⟹ ENSMUSP00000028646

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	2	93,034,592 - 93,058,131 (-)	Ensembl
GRCm38.p6 Ensembl	2	93,204,247 - 93,227,786 (-)	Ensembl

Ensembl Acc Id:

ENSMUST00000111265 ⟹ ENSMUSP00000106896

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	2	93,032,105 - 93,164,832 (-)	Ensembl
GRCm38.p6 Ensembl	2	93,201,760 - 93,334,487 (-)	Ensembl

Ensembl Acc Id:

ENSMUST00000152141

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	2	93,141,608 - 93,164,850 (-)	Ensembl
GRCm38.p6 Ensembl	2	93,311,263 - 93,334,505 (-)	Ensembl

Ensembl Acc Id:

ENSMUST00000154951

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	2	93,122,181 - 93,164,832 (-)	Ensembl
GRCm38.p6 Ensembl	2	93,291,836 - 93,334,487 (-)	Ensembl

Ensembl Acc Id:

ENSMUST00000181716

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	2	93,141,608 - 93,142,860 (-)	Ensembl
GRCm38.p6 Ensembl	2	93,311,263 - 93,312,515 (-)	Ensembl

RefSeq Acc Id:

NM_183180 ⟹ NP_899003

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	2	93,032,105 - 93,164,832 (-)	NCBI
GRCm38	2	93,201,760 - 93,334,487 (-)	NCBI
MGSCv37	2	93,041,917 - 93,174,644 (-)	RGD
Celera	2	94,597,454 - 94,729,881 (-)	RGD
cM Map	2		ENTREZGENE

Sequence:

show sequence

GTCTCAGGGGCTGCAAGCTGCAGGCGGACGCAACGCTGTGCGATTCCGAAGCCCAGCCACGCCA
GGCCGCCCGGCCCTGGCCCCCAGCGGGCGTCGCCGCTCCTTGTCGCTTTGACGCCTAGCCCAGC
GCCGCGGCGCAGGACTACCGGTGCCCCGCAAGTTGCGAGCGCACTCTGCGCCTGGGGAAACTTT
ACCCCGCGGCCGAGCCTCTGCCAGAGTTGCCCCAAAGCTGTCATCAGGAGACTTCAAAAGGATC
TCTCCGTTCCTTCCCAGAAAGGAAAAGGACAGCTGGAAGAGGACAAGCTGGGCTGCTGAGAGAC
ATACCTGAGACCCTCTAACTAAGAGATTGCATCCTGTTGACTCCTGAAGAGCTGCCCAGGTGAA
GAACCATGGAGGGCGACTGTCTGAGCTGCATGAAGTATCTGATGTTTGTTTTCAATTTCTTCGT
TTTTCTGGGAGGCGCTTGCCTGCTAGGTGTTGGCATCTGGGTCCTGGTGGACCCCACCGGCTTC
CGAGAAATCGTGGCTACCAACCCCCTGCTGACCACCGGTGCCTACATCGTACTGGCCATGGGTG
GTCTGCTGTTTCTTCTGGGCTTCCTGGGCTGCTGCGGGGCTGTCCGAGAGAACAGGTGTCTGCT
GCTATTTTTCTTCCTGTTTATCCTGATCATCTTCCTGGTAGAGCTCTCAGCAGCCATCCTGGCC
TTCATCTTCAGAGAACACCTCACCCGAGAGTTCTTCACCAAGGAGCTTACCAAGCACTACCAAG
GCGATAACGATACGGATGTTTTCTCTGCCACCTGGAATTCAGTCATGATCACATTTGGCTGCTG
TGGGGTCAACGGACCTGAAGACTTCAAGCTGGCCTCCGTGTTTCGGCTGCTGACGCTGGACACT
GAGGAGGTGCCCAAGGCTTGCTGTCGGAGGGAACCCCAGACTCGAGATGGAGTGGTGCTGAGCA
GGGAGGAGTGCCAGCTGGGACGGAATCCGTTCATAAACAAGCAGGGCTGTTATACAGTGATCCT
CAACACCTTCGAAACCTATGTCTACCTGGCCGGAGCCTTTGCCATTGGAGTACTGGCTATTGAG
CTCTTCCTCATGGTCTTTGCCATGTGCCTCTTCCGGGGCATCCAGTAGGCCTTGGCCTGAAGAC
ACTCAGCCCACCACTGCCCAGAAGCCAGCCCCTTCTCTTCCCTGTCCTCTGGCCCCAGGGGCGG
AAGCAAGGCCAGCCCAAACGGCCAGAAGCATAGAGCTAATTTTTAAATAAACAAACAAACAAAC
AAAAAAGACAGACATGAAGGGGCCTCACCTAGGCTCTAAAGCAAGGGGCATGGGCTCTACAAGG
ACCTAGGGCTGGCCTGGGACCAGCTGTTCCTGAGACCAAAGGTTCATCAGCCTCAGAGCCCCTT
GGCCCTGTCAGACTGGAGTGTCCCTTGGCCCGGATCACCTCTCTTAGCATTTCCAGGATCAGAG
CAACCAGGAGGTAGAAACACATCCTGGAGGAGGAGCCCGGTCCTCAGGCCCCAAGGAGCCGGCT
TTTCACAACACAAGGACAGACTCTGCAGCACCATCTGCTGGAGAGCGAAGCGGTCCCTGCTCCC
GCTGGCTGAGGGTGGCTGTGTGTGGACACTGGATCAGAAGGTGGCCCTTTCATTTCCGTCCAGT
CACACAGCATGTGCATGACAAGGTCATCTCCAGGCTGCTGTCGCTCCAGCCAGGACTCCACCCC
GATGTAAACTGGCCAGGAACTGCCTGCATCCAGCTCTACAGTCCGTACTGTGTCCACTCTGCCC
TGCTTGTACCTCTGTCAGAGATCCAACTGTGATACATCACCTGTCCCCGTGGGCCATGCCCCAC
CCCTGTTCTCCCAGGTGGAAGACACCCCAGTATTGTTCATTTCTCTCTTTCTACCCAGAGCTGA
GGCTTGAATGTGTTCTTCAAGGTCCCTGCCAAGAATTCACCCCTGCATCCCTCCACATACGGAT
GGATCTCACTACCTCCCAACTCAGCCTCCTGCCTTCAGATGCTCTGATGTCACCATCACCTCCG
CAGACAGAAGGGGTTTCCATTTTTCCGTCTGTGTACCCCTTCACTCTCTCTCCTTTCTAGAGGT
TAAGGTCATGCCTCTTGTCTGCAGACTTAACCCCACAGCATCTCCTACCGTGACACCTTCTGAC
CTTTTGCTGAACATTTATTTTGTTAGTCTCTCTAGGCTCAGATTACCCAGACTAATAGGTTCAC
AACCAACCAACCAACCAACAGACACACACACACACACACACACACACACACACACACACACAAA
CACCCCAGACTAATAGGTTCACAACCAACCAACCAACCAACAGACACACACACACACACACACA
CACACACACACAAACAAACACCCCAGACTAATAGGTTCACAACCAACCAACCAACCAACACCCC
CCCACACACACACACACACACACACAAACTTGAACTGCAGGCTAGGTTAGCAACTAGTTGCAAG
ATGCCTGACCCTGCCAGGACCGTGTTGAATCCATTAGTGTTGTCTGTCAGGATCTCAAATTTGA
TTAATTATGTCTGCCAAGGGCACAAAAGGGGAACAGTGGTGGAAGGAACAGCTAGGTGTCTGCT
CTCCTCTCTCAGATGGAAGAGCCTGACCTGAACTCCAGCCTTCCTTTGCCCTTCTGCCACCTGG
GAGTCATAGCCATAGCCTGTTCTATTCTGCTGTCTGGGTGCAAGGGGGGCTACTTCTCCCATTT
TCTCTCCTCTTTATGTGGTCCTCACCCAGCCTGGCCTTCCGGGGAGTGGGTGTCTCTGAATGCT
ATACGGAAGTTGTCTTTATGACAGCTTAATTGGCATCCCCATAGTAAGCTCCCTAGAGGCTGAG
TCACCAGATCAGGGGGCCCCTCTGCTGGCTTGCACCCCCAGACTAAGAGGACCCAGGCTGACTC
AGAACCCAGCACGTACTGGACTCCAACTGTCTAGGAAGGCAAATGGCTTGGCTATTGATTGGAA
GTTCATGGCTAGGTTGAGGACTTAGCCCAACCACAGCGGCTGCCACCCAGAACTAGCCCAGGCT
TCCAGAGATGGGCAGGGCTGGGACAGGGAGGGACTGAGAAGCCAGATATGGAGCCTAGGCAATT
CCAGGGCAGATCAGAGTCCCTCACCAGAACTTTCCACACTTACGCTGAAGCGCTCCCAAGTAGC
CCTGATTCAACCCAGCTTCTCAGCATCCTCATGGGGCCAGACAGACACAGTCTTCACCCTCTGA
GCTTGCTGGTAGCCATTGCAAGGCTGTCTGAGGTCATCCTGGTGGGGCTTGGTGAGCTGCTCTG
TGTACTCCCAGAGGAATGGAGGGGAGCTCTTCCTTCACCCCAAGATGCCTCAGCCAGTAGTGAG
CAGAACAGCCACTTCCTGTCCCAGAGCAGTGGCCTAAGGGACAGCTGTATCTGACAGGCGAGGA
GCTAAGACTGGACCTGTGGCTCATGCTCCCCATTATCCTGTCCCAAGCCCCTGGCCTACCTGGG
TTCTGAACCCAGCACCTTCATCCCCAGGAACTCTGATACACACACACACACACACACACACACA
CACACACACACACACACACACACGTCATATGCTAAAGTCTATTTTGGAATTTGTAAATGTCCCT
TGCAGTAGGAAACAGAGCTAATTTATCATTGTATCTCCCAAGTCTCCCCTTTTTATATTCTATA
TTAAGAGAAATTTTGTAATATAAAACAGGACACCACGCAAAAAAAAAAAAAAAAAAAAAAA

hide sequence

RefSeq Acc Id:

XM_006499474 ⟹ XP_006499537

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	2	93,032,105 - 93,145,759 (-)	NCBI
GRCm38	2	93,201,760 - 93,315,424 (-)	NCBI

Sequence:

show sequence

AGCAGAGGGAGGCCAGGAAACCATCTGCAGCAAGACAGACACGGCGCTTGCTGCATGCTTAGGT
GCTCACTGTGACATCAGAGATGGCAGGCTGGTGGGAACAGAGGCTGGAAACTGGCAGTCAAGCC
TCAATCCCCTCTGCAGCCAGTGGACAGGCAATCATGAACTTGAGCCTTGGTGGACATGGGTAGA
AGCCCCGAGGATGAGGGATTTAGAAGGAGCTGGAAGAGGAAGTGTACCGGGAGAACCACACAGC
AACTGACAGGAAAGTATGGACTTCTGGGCCACACTGTGGAGCTGAGATGTCACCTCGAGCCCTC
TCTTCTGGCTGCTCATCTCTTCGTGCACAGTACTCGAGATTATAGGTCTGCCCAGAGAGCCTGC
ATTCGTGAGATGATGATGGACTCCCCTTCCTCTTCAGCTATCAGAAAGCCCTCTGCAGCTCAGA
GCAAAGATACACATGTTGGCGCTGGGCTTCACAGCTCATTGTCTTGGGCACAGGAGTCCTGGTG
GTCTGGGACTGGTGTGGGAAGACTGACAAGATGGAAGATGCGTTCCTGGAGGGGCTTGGGCTCT
ATGCCCTGCTCTGGGAGTCCTTGTCTGAGTTGCCCCAAAGCTGTCATCAGGAGACTTCAAAAGG
ATCTCTCCGTTCCTTCCCAGAAAGGAAAAGGACAGCTGGAAGAGGACAAGCTGGGCTGCTGAGA
GACATACCTGAGACCCTCTAACTAAGAGATTGCATCCTGTTGACTCCTGAAGAGCTGCCCAGGT
GAAGAACCATGGAGGGCGACTGTCTGAGCTGCATGAAGTATCTGATGTTTGTTTTCAATTTCTT
CGTTTTTCTGGGAGGCGCTTGCCTGCTAGGTGTTGGCATCTGGGTCCTGGTGGACCCCACCGGC
TTCCGAGAAATCGTGGCTACCAACCCCCTGCTGACCACCGGTGCCTACATCGTACTGGCCATGG
GTGGTCTGCTGTTTCTTCTGGGCTTCCTGGGCTGCTGCGGGGCTGTCCGAGAGAACAGGTGTCT
GCTGCTATTTTTCTTCCTGTTTATCCTGATCATCTTCCTGGTAGAGCTCTCAGCAGCCATCCTG
GCCTTCATCTTCAGAGAACACCTCACCCGAGAGTTCTTCACCAAGGAGCTTACCAAGCACTACC
AAGGCGATAACGATACGGATGTTTTCTCTGCCACCTGGAATTCAGTCATGATCACATTTGGCTG
CTGTGGGGTCAACGGACCTGAAGACTTCAAGCTGGCCTCCGTGTTTCGGCTGCTGACGCTGGAC
ACTGAGGAGGTGCCCAAGGCTTGCTGTCGGAGGGAACCCCAGACTCGAGATGGAGTGGTGCTGA
GCAGGGAGGAGTGCCAGCTGGGACGGAATCCGTTCATAAACAAGCAGGGCTGTTATACAGTGAT
CCTCAACACCTTCGAAACCTATGTCTACCTGGCCGGAGCCTTTGCCATTGGAGTACTGGCTATT
GAGCTCTTCCTCATGGTCTTTGCCATGTGCCTCTTCCGGGGCATCCAGTAGGCCTTGGCCTGAA
GACACTCAGCCCACCACTGCCCAGAAGCCAGCCCCTTCTCTTCCCTGTCCTCTGGCCCCAGGGG
CGGAAGCAAGGCCAGCCCAAACGGCCAGAAGCATAGAGCTAATTTTTAAATAAACAAACAAACA
AACAAAAAAGACAGACATGAAGGGGCCTCACCTAGGCTCTAAAGCAAGGGGCATGGGCTCTACA
AGGACCTAGGGCTGGCCTGGGACCAGCTGTTCCTGAGACCAAAGGTTCATCAGCCTCAGAGCCC
CTTGGCCCTGTCAGACTGGAGTGTCCCTTGGCCCGGATCACCTCTCTTAGCATTTCCAGGATCA
GAGCAACCAGGAGGTAGAAACACATCCTGGAGGAGGAGCCCGGTCCTCAGGCCCCAAGGAGCCG
GCTTTTCACAACACAAGGACAGACTCTGCAGCACCATCTGCTGGAGAGCGAAGCGGTCCCTGCT
CCCGCTGGCTGAGGGTGGCTGTGTGTGGACACTGGATCAGAAGGTGGCCCTTTCATTTCCGTCC
AGTCACACAGCATGTGCATGACAAGGTCATCTCCAGGCTGCTGTCGCTCCAGCCAGGACTCCAC
CCCGATGTAAACTGGCCAGGAACTGCCTGCATCCAGCTCTACAGTCCGTACTGTGTCCACTCTG
CCCTGCTTGTACCTCTGTCAGAGATCCAACTGTGATACATCACCTGTCCCCGTGGGCCATGCCC
CACCCCTGTTCTCCCAGGTGGAAGACACCCCAGTATTGTTCATTTCTCTCTTTCTACCCAGAGC
TGAGGCTTGAATGTGTTCTTCAAGGTCCCTGCCAAGAATTCACCCCTGCATCCCTCCACATACG
GATGGATCTCACTACCTCCCAACTCAGCCTCCTGCCTTCAGATGCTCTGATGTCACCATCACCT
CCGCAGACAGAAGGGGTTTCCATTTTTCCGTCTGTGTACCCCTTCACTCTCTCTCCTTTCTAGA
GGTTAAGGTCATGCCTCTTGTCTGCAGACTTAACCCCACAGCATCTCCTACCGTGACACCTTCT
GACCTTTTGCTGAACATTTATTTTGTTAGTCTCTCTAGGCTCAGATTACCCAGACTAATAGGTT
CACAACCAACCAACCAACCAACAGACACACACACACACACACACACACACACACACACACACAC
AAACACCCCAGACTAATAGGTTCACAACCAACCAACCAACCAACAGACACACACACACACACAC
ACACACACACACACAAACAAACACCCCAGACTAATAGGTTCACAACCAACCAACCAACCAACAC
CCCCCCACACACACACACACACACACACAAACTTGAACTGCAGGCTAGGTTAGCAACTAGTTGC
AAGATGCCTGACCCTGCCAGGACCGTGTTGAATCCATTAGTGTTGTCTGTCAGGATCTCAAATT
TGATTAATTATGTCTGCCAAGGGCACAAAAGGGGAACAGTGGTGGAAGGAACAGCTAGGTGTCT
GCTCTCCTCTCTCAGATGGAAGAGCCTGACCTGAACTCCAGCCTTCCTTTGCCCTTCTGCCACC
TGGGAGTCATAGCCATAGCCTGTTCTATTCTGCTGTCTGGGTGCAAGGGGGGCTACTTCTCCCA
TTTTCTCTCCTCTTTATGTGGTCCTCACCCAGCCTGGCCTTCCGGGGAGTGGGTGTCTCTGAAT
GCTATACGGAAGTTGTCTTTATGACAGCTTAATTGGCATCCCCATAGTAAGCTCCCTAGAGGCT
GAGTCACCAGATCAGGGGGCCCCTCTGCTGGCTTGCACCCCCAGACTAAGAGGACCCAGGCTGA
CTCAGAACCCAGCACGTACTGGACTCCAACTGTCTAGGAAGGCAAATGGCTTGGCTATTGATTG
GAAGTTCATGGCTAGGTTGAGGACTTAGCCCAACCACAGCGGCTGCCACCCAGAACTAGCCCAG
GCTTCCAGAGATGGGCAGGGCTGGGACAGGGAGGGACTGAGAAGCCAGATATGGAGCCTAGGCA
ATTCCAGGGCAGATCAGAGTCCCTCACCAGAACTTTCCACACTTACGCTGAAGCGCTCCCAAGT
AGCCCTGATTCAACCCAGCTTCTCAGCATCCTCATGGGGCCAGACAGACACAGTCTTCACCCTC
TGAGCTTGCTGGTAGCCATTGCAAGGCTGTCTGAGGTCATCCTGGTGGGGCTTGGTGAGCTGCT
CTGTGTACTCCCAGAGGAATGGAGGGGAGCTCTTCCTTCACCCCAAGATGCCTCAGCCAGTAGT
GAGCAGAACAGCCACTTCCTGTCCCAGAGCAGTGGCCTAAGGGACAGCTGTATCTGACAGGCGA
GGAGCTAAGACTGGACCTGTGGCTCATGCTCCCCATTATCCTGTCCCAAGCCCCTGGCCTACCT
GGGTTCTGAACCCAGCACCTTCATCCCCAGGAACTCTGATACACACACACACACACACACACAC
ACACACACACACACACACACACACACGTCATATGCTAAAGTCTATTTTGGAATTTGTAAATGTC
CCTTGCAGTAGGAAACAGAGCTAATTTATCATTGTATCTCCCAAGTCTCCCCTTTTTATATTCT
ATATTAAGAGAAATTTTGTAATATAAAACAGGACACCACGCA

hide sequence

RefSeq Acc Id:

XM_006499475 ⟹ XP_006499538

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	2	93,032,105 - 93,164,898 (-)	NCBI
GRCm38	2	93,201,760 - 93,334,551 (-)	NCBI

Sequence:

show sequence

GGCCGGAGGGTGGCGGGAGGTGTGGCCGGCGGCGGTGGCGGGTGAGCCGCTGCAGCTGCCGCCG
GCGTCTCAGGGGCTGCAAGCTGCAGGCGGACGCAACGCTGTGCGATTCCGAAGCCCAGCCACGC
CAGGCCGCCCGGCCCTGGCCCCCAGCGGGCGTCGCCGCTCCTTGTCGCTTTGACGCCTAGCCCA
GCGCCGCGGCGCAGGACTACCGGTGCCCCGCAAGTTGCGAGCGCACTCTGCGCCTGGGGAAACT
TTACCCCGCGGCCGAGCCTCTGCCAGTGACAGGAAAGTATGGACTTCTGGGCCACACTGTGGAG
CTGAGATGTCACCTCGAGCCCTCTCTTCTGGCTGCTCATCTCTTCGTGCACAGTACTCGAGATT
ATAGGTCTGCCCAGAGAGCCTGCATTCGTGAGATGATGATGGACTCCCCTTCCTCTTCAGCTAT
CAGAAAGCCCTCTGCAGCTCAGAGCAAAGATACACATGTTGGCGCTGGGCTTCACAGCTCATTG
TCTTGGGCACAGGAGTCCTGGTGGTCTGGGACTGGTGTGGGAAGACTGACAAGATGGAAGATGC
GTTCCTGGAGGGGCTTGGGCTCTATGCCCTGCTCTGGGAGTCCTTGTCTGAGTTGCCCCAAAGC
TGTCATCAGGAGACTTCAAAAGGATCTCTCCGTTCCTTCCCAGAAAGGAAAAGGACAGCTGGAA
GAGGACAAGCTGGGCTGCTGAGAGACATACCTGAGACCCTCTAACTAAGAGATTGCATCCTGTT
GACTCCTGAAGAGCTGCCCAGGTGAAGAACCATGGAGGGCGACTGTCTGAGCTGCATGAAGTAT
CTGATGTTTGTTTTCAATTTCTTCGTTTTTCTGGGAGGCGCTTGCCTGCTAGGTGTTGGCATCT
GGGTCCTGGTGGACCCCACCGGCTTCCGAGAAATCGTGGCTACCAACCCCCTGCTGACCACCGG
TGCCTACATCGTACTGGCCATGGGTGGTCTGCTGTTTCTTCTGGGCTTCCTGGGCTGCTGCGGG
GCTGTCCGAGAGAACAGGTGTCTGCTGCTATTTTTCTTCCTGTTTATCCTGATCATCTTCCTGG
TAGAGCTCTCAGCAGCCATCCTGGCCTTCATCTTCAGAGAACACCTCACCCGAGAGTTCTTCAC
CAAGGAGCTTACCAAGCACTACCAAGGCGATAACGATACGGATGTTTTCTCTGCCACCTGGAAT
TCAGTCATGATCACATTTGGCTGCTGTGGGGTCAACGGACCTGAAGACTTCAAGCTGGCCTCCG
TGTTTCGGCTGCTGACGCTGGACACTGAGGAGGTGCCCAAGGCTTGCTGTCGGAGGGAACCCCA
GACTCGAGATGGAGTGGTGCTGAGCAGGGAGGAGTGCCAGCTGGGACGGAATCCGTTCATAAAC
AAGCAGGGCTGTTATACAGTGATCCTCAACACCTTCGAAACCTATGTCTACCTGGCCGGAGCCT
TTGCCATTGGAGTACTGGCTATTGAGCTCTTCCTCATGGTCTTTGCCATGTGCCTCTTCCGGGG
CATCCAGTAGGCCTTGGCCTGAAGACACTCAGCCCACCACTGCCCAGAAGCCAGCCCCTTCTCT
TCCCTGTCCTCTGGCCCCAGGGGCGGAAGCAAGGCCAGCCCAAACGGCCAGAAGCATAGAGCTA
ATTTTTAAATAAACAAACAAACAAACAAAAAAGACAGACATGAAGGGGCCTCACCTAGGCTCTA
AAGCAAGGGGCATGGGCTCTACAAGGACCTAGGGCTGGCCTGGGACCAGCTGTTCCTGAGACCA
AAGGTTCATCAGCCTCAGAGCCCCTTGGCCCTGTCAGACTGGAGTGTCCCTTGGCCCGGATCAC
CTCTCTTAGCATTTCCAGGATCAGAGCAACCAGGAGGTAGAAACACATCCTGGAGGAGGAGCCC
GGTCCTCAGGCCCCAAGGAGCCGGCTTTTCACAACACAAGGACAGACTCTGCAGCACCATCTGC
TGGAGAGCGAAGCGGTCCCTGCTCCCGCTGGCTGAGGGTGGCTGTGTGTGGACACTGGATCAGA
AGGTGGCCCTTTCATTTCCGTCCAGTCACACAGCATGTGCATGACAAGGTCATCTCCAGGCTGC
TGTCGCTCCAGCCAGGACTCCACCCCGATGTAAACTGGCCAGGAACTGCCTGCATCCAGCTCTA
CAGTCCGTACTGTGTCCACTCTGCCCTGCTTGTACCTCTGTCAGAGATCCAACTGTGATACATC
ACCTGTCCCCGTGGGCCATGCCCCACCCCTGTTCTCCCAGGTGGAAGACACCCCAGTATTGTTC
ATTTCTCTCTTTCTACCCAGAGCTGAGGCTTGAATGTGTTCTTCAAGGTCCCTGCCAAGAATTC
ACCCCTGCATCCCTCCACATACGGATGGATCTCACTACCTCCCAACTCAGCCTCCTGCCTTCAG
ATGCTCTGATGTCACCATCACCTCCGCAGACAGAAGGGGTTTCCATTTTTCCGTCTGTGTACCC
CTTCACTCTCTCTCCTTTCTAGAGGTTAAGGTCATGCCTCTTGTCTGCAGACTTAACCCCACAG
CATCTCCTACCGTGACACCTTCTGACCTTTTGCTGAACATTTATTTTGTTAGTCTCTCTAGGCT
CAGATTACCCAGACTAATAGGTTCACAACCAACCAACCAACCAACAGACACACACACACACACA
CACACACACACACACACACACACAAACACCCCAGACTAATAGGTTCACAACCAACCAACCAACC
AACAGACACACACACACACACACACACACACACACACAAACAAACACCCCAGACTAATAGGTTC
ACAACCAACCAACCAACCAACACCCCCCCACACACACACACACACACACACAAACTTGAACTGC
AGGCTAGGTTAGCAACTAGTTGCAAGATGCCTGACCCTGCCAGGACCGTGTTGAATCCATTAGT
GTTGTCTGTCAGGATCTCAAATTTGATTAATTATGTCTGCCAAGGGCACAAAAGGGGAACAGTG
GTGGAAGGAACAGCTAGGTGTCTGCTCTCCTCTCTCAGATGGAAGAGCCTGACCTGAACTCCAG
CCTTCCTTTGCCCTTCTGCCACCTGGGAGTCATAGCCATAGCCTGTTCTATTCTGCTGTCTGGG
TGCAAGGGGGGCTACTTCTCCCATTTTCTCTCCTCTTTATGTGGTCCTCACCCAGCCTGGCCTT
CCGGGGAGTGGGTGTCTCTGAATGCTATACGGAAGTTGTCTTTATGACAGCTTAATTGGCATCC
CCATAGTAAGCTCCCTAGAGGCTGAGTCACCAGATCAGGGGGCCCCTCTGCTGGCTTGCACCCC
CAGACTAAGAGGACCCAGGCTGACTCAGAACCCAGCACGTACTGGACTCCAACTGTCTAGGAAG
GCAAATGGCTTGGCTATTGATTGGAAGTTCATGGCTAGGTTGAGGACTTAGCCCAACCACAGCG
GCTGCCACCCAGAACTAGCCCAGGCTTCCAGAGATGGGCAGGGCTGGGACAGGGAGGGACTGAG
AAGCCAGATATGGAGCCTAGGCAATTCCAGGGCAGATCAGAGTCCCTCACCAGAACTTTCCACA
CTTACGCTGAAGCGCTCCCAAGTAGCCCTGATTCAACCCAGCTTCTCAGCATCCTCATGGGGCC
AGACAGACACAGTCTTCACCCTCTGAGCTTGCTGGTAGCCATTGCAAGGCTGTCTGAGGTCATC
CTGGTGGGGCTTGGTGAGCTGCTCTGTGTACTCCCAGAGGAATGGAGGGGAGCTCTTCCTTCAC
CCCAAGATGCCTCAGCCAGTAGTGAGCAGAACAGCCACTTCCTGTCCCAGAGCAGTGGCCTAAG
GGACAGCTGTATCTGACAGGCGAGGAGCTAAGACTGGACCTGTGGCTCATGCTCCCCATTATCC
TGTCCCAAGCCCCTGGCCTACCTGGGTTCTGAACCCAGCACCTTCATCCCCAGGAACTCTGATA
CACACACACACACACACACACACACACACACACACACACACACACACACGTCATATGCTAAAGT
CTATTTTGGAATTTGTAAATGTCCCTTGCAGTAGGAAACAGAGCTAATTTATCATTGTATCTCC
CAAGTCTCCCCTTTTTATATTCTATATTAAGAGAAATTTTGTAATATAAAACAGGACACCACGC
A

hide sequence

RefSeq Acc Id:

XM_006499476 ⟹ XP_006499539

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	2	93,032,105 - 93,164,457 (-)	NCBI
GRCm38	2	93,201,760 - 93,334,209 (-)	NCBI

Sequence:

show sequence

GACCCGGAGCATGCTCGGGTCGCGACTTCGCCCAGGTCAGGTGCAGCCATTCTGCGCCCAGCGA
TCTCGGGGGCTCAGGCGACAGTAAGGCGGCAGAGTTGCCCCAAAGCTGTCATCAGGAGACTTCA
AAAGGATCTCTCCGTTCCTTCCCAGAAAGGAAAAGGACAGCTGGAAGAGGACAAGCTGGGCTGC
TGAGAGACATACCTGAGACCCTCTAACTAAGAGATTGCATCCTGTTGACTCCTGAAGAGCTGCC
CAGGTGAAGAACCATGGAGGGCGACTGTCTGAGCTGCATGAAGTATCTGATGTTTGTTTTCAAT
TTCTTCGTTTTTCTGGGAGGCGCTTGCCTGCTAGGTGTTGGCATCTGGGTCCTGGTGGACCCCA
CCGGCTTCCGAGAAATCGTGGCTACCAACCCCCTGCTGACCACCGGTGCCTACATCGTACTGGC
CATGGGTGGTCTGCTGTTTCTTCTGGGCTTCCTGGGCTGCTGCGGGGCTGTCCGAGAGAACAGG
TGTCTGCTGCTATTTTTCTTCCTGTTTATCCTGATCATCTTCCTGGTAGAGCTCTCAGCAGCCA
TCCTGGCCTTCATCTTCAGAGAACACCTCACCCGAGAGTTCTTCACCAAGGAGCTTACCAAGCA
CTACCAAGGCGATAACGATACGGATGTTTTCTCTGCCACCTGGAATTCAGTCATGATCACATTT
GGCTGCTGTGGGGTCAACGGACCTGAAGACTTCAAGCTGGCCTCCGTGTTTCGGCTGCTGACGC
TGGACACTGAGGAGGTGCCCAAGGCTTGCTGTCGGAGGGAACCCCAGACTCGAGATGGAGTGGT
GCTGAGCAGGGAGGAGTGCCAGCTGGGACGGAATCCGTTCATAAACAAGCAGGGCTGTTATACA
GTGATCCTCAACACCTTCGAAACCTATGTCTACCTGGCCGGAGCCTTTGCCATTGGAGTACTGG
CTATTGAGCTCTTCCTCATGGTCTTTGCCATGTGCCTCTTCCGGGGCATCCAGTAGGCCTTGGC
CTGAAGACACTCAGCCCACCACTGCCCAGAAGCCAGCCCCTTCTCTTCCCTGTCCTCTGGCCCC
AGGGGCGGAAGCAAGGCCAGCCCAAACGGCCAGAAGCATAGAGCTAATTTTTAAATAAACAAAC
AAACAAACAAAAAAGACAGACATGAAGGGGCCTCACCTAGGCTCTAAAGCAAGGGGCATGGGCT
CTACAAGGACCTAGGGCTGGCCTGGGACCAGCTGTTCCTGAGACCAAAGGTTCATCAGCCTCAG
AGCCCCTTGGCCCTGTCAGACTGGAGTGTCCCTTGGCCCGGATCACCTCTCTTAGCATTTCCAG
GATCAGAGCAACCAGGAGGTAGAAACACATCCTGGAGGAGGAGCCCGGTCCTCAGGCCCCAAGG
AGCCGGCTTTTCACAACACAAGGACAGACTCTGCAGCACCATCTGCTGGAGAGCGAAGCGGTCC
CTGCTCCCGCTGGCTGAGGGTGGCTGTGTGTGGACACTGGATCAGAAGGTGGCCCTTTCATTTC
CGTCCAGTCACACAGCATGTGCATGACAAGGTCATCTCCAGGCTGCTGTCGCTCCAGCCAGGAC
TCCACCCCGATGTAAACTGGCCAGGAACTGCCTGCATCCAGCTCTACAGTCCGTACTGTGTCCA
CTCTGCCCTGCTTGTACCTCTGTCAGAGATCCAACTGTGATACATCACCTGTCCCCGTGGGCCA
TGCCCCACCCCTGTTCTCCCAGGTGGAAGACACCCCAGTATTGTTCATTTCTCTCTTTCTACCC
AGAGCTGAGGCTTGAATGTGTTCTTCAAGGTCCCTGCCAAGAATTCACCCCTGCATCCCTCCAC
ATACGGATGGATCTCACTACCTCCCAACTCAGCCTCCTGCCTTCAGATGCTCTGATGTCACCAT
CACCTCCGCAGACAGAAGGGGTTTCCATTTTTCCGTCTGTGTACCCCTTCACTCTCTCTCCTTT
CTAGAGGTTAAGGTCATGCCTCTTGTCTGCAGACTTAACCCCACAGCATCTCCTACCGTGACAC
CTTCTGACCTTTTGCTGAACATTTATTTTGTTAGTCTCTCTAGGCTCAGATTACCCAGACTAAT
AGGTTCACAACCAACCAACCAACCAACAGACACACACACACACACACACACACACACACACACA
CACACAAACACCCCAGACTAATAGGTTCACAACCAACCAACCAACCAACAGACACACACACACA
CACACACACACACACACACAAACAAACACCCCAGACTAATAGGTTCACAACCAACCAACCAACC
AACACCCCCCCACACACACACACACACACACACAAACTTGAACTGCAGGCTAGGTTAGCAACTA
GTTGCAAGATGCCTGACCCTGCCAGGACCGTGTTGAATCCATTAGTGTTGTCTGTCAGGATCTC
AAATTTGATTAATTATGTCTGCCAAGGGCACAAAAGGGGAACAGTGGTGGAAGGAACAGCTAGG
TGTCTGCTCTCCTCTCTCAGATGGAAGAGCCTGACCTGAACTCCAGCCTTCCTTTGCCCTTCTG
CCACCTGGGAGTCATAGCCATAGCCTGTTCTATTCTGCTGTCTGGGTGCAAGGGGGGCTACTTC
TCCCATTTTCTCTCCTCTTTATGTGGTCCTCACCCAGCCTGGCCTTCCGGGGAGTGGGTGTCTC
TGAATGCTATACGGAAGTTGTCTTTATGACAGCTTAATTGGCATCCCCATAGTAAGCTCCCTAG
AGGCTGAGTCACCAGATCAGGGGGCCCCTCTGCTGGCTTGCACCCCCAGACTAAGAGGACCCAG
GCTGACTCAGAACCCAGCACGTACTGGACTCCAACTGTCTAGGAAGGCAAATGGCTTGGCTATT
GATTGGAAGTTCATGGCTAGGTTGAGGACTTAGCCCAACCACAGCGGCTGCCACCCAGAACTAG
CCCAGGCTTCCAGAGATGGGCAGGGCTGGGACAGGGAGGGACTGAGAAGCCAGATATGGAGCCT
AGGCAATTCCAGGGCAGATCAGAGTCCCTCACCAGAACTTTCCACACTTACGCTGAAGCGCTCC
CAAGTAGCCCTGATTCAACCCAGCTTCTCAGCATCCTCATGGGGCCAGACAGACACAGTCTTCA
CCCTCTGAGCTTGCTGGTAGCCATTGCAAGGCTGTCTGAGGTCATCCTGGTGGGGCTTGGTGAG
CTGCTCTGTGTACTCCCAGAGGAATGGAGGGGAGCTCTTCCTTCACCCCAAGATGCCTCAGCCA
GTAGTGAGCAGAACAGCCACTTCCTGTCCCAGAGCAGTGGCCTAAGGGACAGCTGTATCTGACA
GGCGAGGAGCTAAGACTGGACCTGTGGCTCATGCTCCCCATTATCCTGTCCCAAGCCCCTGGCC
TACCTGGGTTCTGAACCCAGCACCTTCATCCCCAGGAACTCTGATACACACACACACACACACA
CACACACACACACACACACACACACACACACGTCATATGCTAAAGTCTATTTTGGAATTTGTAA
ATGTCCCTTGCAGTAGGAAACAGAGCTAATTTATCATTGTATCTCCCAAGTCTCCCCTTTTTAT
ATTCTATATTAAGAGAAATTTTGTAATATAAAACAGGACACCACGCA

hide sequence

RefSeq Acc Id:

XM_006499477 ⟹ XP_006499540

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	2	93,032,105 - 93,058,970 (-)	NCBI
GRCm38	2	93,201,760 - 93,228,634 (-)	NCBI

Sequence:

show sequence

ACAGAAAGGGAGCACAGATGAGGGTGAGAGGAAGCAGAAGGCCTGCTGAGCAAGGCCTGAGACC
AAGGCCTCTGCCGCTGAAATGCACCCCAGCACCGGGAGTGACAGGGAGTTACTTCAGCAAGCTG
GCTGTGGCTAGAGGACTTGATCTGGGGGAAAGAACTTTTGTCTCAGTAGCTCCTGCAACCTGTA
GTGTGTTTGGTCTAATGACACCATGTCTTCATCTGAGACCCAGGAATGCCATCTCCCTGCGTAG
ACAACCCAGTGAGGTCAGGGTGCCAAGAGCTTTTTGCTAGTCAACCGAAGGCAAAGAACATTCT
GAGAAGGACACAGGGTAAAGGGTCTAGTAGTACGGGCTGTTGGAGCTAGTGGTTCTGGACCTGT
GTGCAGCTCGTGAAATGAGGAGTTAGAGACAGTCCCCACCATGTTGTGTCTTTGAGAATGCTCT
GGTGGGAGGAGCCCTGGGAAGTGTCTGAATGCAACAGGGGGCCGAGGCAGAGCTAGAGACCCTA
GGCTCACAGACTTGTAATGGGGCCTCCCAGATGCTGCCTTGCCCTGCAGCCCTGGATATTCATG
GCTCAGTGATCACCCGGCAGGGAAGGCTGTCCTTTGAATTCAGTTTCACTACAGTGGCCCTCCC
CTCAGGCCCTGCTTCTCTGGAGCCTAATTAGGCTTCCACCCACCCCCACCCCCCTTTCACTGAG
CCTGCCCTGTGCCATGGGCAGACTCCCCAGGATTTCAAGCCAATTGCTTGTTTATGAGCCCAGC
CCGTCTGTCTTGGGACGAGGCCCAGAGGCACAGCCAGTGAGCCAAAGAGCCCCCCTCTCCCAGC
CAGAACTGGATGGCCCCAACCGGTTGCTGTGCTCACAAGTGCCTTCCATGTTAGTGCTGGTTTA
AGTGCCCATCTTGGCTGGGTATCGTTTTATCCATTTCTGGGACTTTCTAACCACTTCCAGCCTT
TGGGGCTTCATTTCACCCAGGATAGTGATTAACATCATGAACTTTCCTGAGCTTTTGGGAGGAT
CAAGTGAGCTTACAGGCACTGGCATCATCAGCAGGTCACCATAAAAAAACCGACAAGCTGGGCT
GCTGAGAGACATACCTGAGACCCTCTAACTAAGAGATTGCATCCTGTTGACTCCTGAAGAGCTG
CCCAGGTGAAGAACCATGGAGGGCGACTGTCTGAGCTGCATGAAGTATCTGATGTTTGTTTTCA
ATTTCTTCGTTTTTCTGGGAGGCGCTTGCCTGCTAGGTGTTGGCATCTGGGTCCTGGTGGACCC
CACCGGCTTCCGAGAAATCGTGGCTACCAACCCCCTGCTGACCACCGGTGCCTACATCGTACTG
GCCATGGGTGGTCTGCTGTTTCTTCTGGGCTTCCTGGGCTGCTGCGGGGCTGTCCGAGAGAACA
GGTGTCTGCTGCTATTTTTCTTCCTGTTTATCCTGATCATCTTCCTGGTAGAGCTCTCAGCAGC
CATCCTGGCCTTCATCTTCAGAGAACACCTCACCCGAGAGTTCTTCACCAAGGAGCTTACCAAG
CACTACCAAGGCGATAACGATACGGATGTTTTCTCTGCCACCTGGAATTCAGTCATGATCACAT
TTGGCTGCTGTGGGGTCAACGGACCTGAAGACTTCAAGCTGGCCTCCGTGTTTCGGCTGCTGAC
GCTGGACACTGAGGAGGTGCCCAAGGCTTGCTGTCGGAGGGAACCCCAGACTCGAGATGGAGTG
GTGCTGAGCAGGGAGGAGTGCCAGCTGGGACGGAATCCGTTCATAAACAAGCAGGGCTGTTATA
CAGTGATCCTCAACACCTTCGAAACCTATGTCTACCTGGCCGGAGCCTTTGCCATTGGAGTACT
GGCTATTGAGCTCTTCCTCATGGTCTTTGCCATGTGCCTCTTCCGGGGCATCCAGTAGGCCTTG
GCCTGAAGACACTCAGCCCACCACTGCCCAGAAGCCAGCCCCTTCTCTTCCCTGTCCTCTGGCC
CCAGGGGCGGAAGCAAGGCCAGCCCAAACGGCCAGAAGCATAGAGCTAATTTTTAAATAAACAA
ACAAACAAACAAAAAAGACAGACATGAAGGGGCCTCACCTAGGCTCTAAAGCAAGGGGCATGGG
CTCTACAAGGACCTAGGGCTGGCCTGGGACCAGCTGTTCCTGAGACCAAAGGTTCATCAGCCTC
AGAGCCCCTTGGCCCTGTCAGACTGGAGTGTCCCTTGGCCCGGATCACCTCTCTTAGCATTTCC
AGGATCAGAGCAACCAGGAGGTAGAAACACATCCTGGAGGAGGAGCCCGGTCCTCAGGCCCCAA
GGAGCCGGCTTTTCACAACACAAGGACAGACTCTGCAGCACCATCTGCTGGAGAGCGAAGCGGT
CCCTGCTCCCGCTGGCTGAGGGTGGCTGTGTGTGGACACTGGATCAGAAGGTGGCCCTTTCATT
TCCGTCCAGTCACACAGCATGTGCATGACAAGGTCATCTCCAGGCTGCTGTCGCTCCAGCCAGG
ACTCCACCCCGATGTAAACTGGCCAGGAACTGCCTGCATCCAGCTCTACAGTCCGTACTGTGTC
CACTCTGCCCTGCTTGTACCTCTGTCAGAGATCCAACTGTGATACATCACCTGTCCCCGTGGGC
CATGCCCCACCCCTGTTCTCCCAGGTGGAAGACACCCCAGTATTGTTCATTTCTCTCTTTCTAC
CCAGAGCTGAGGCTTGAATGTGTTCTTCAAGGTCCCTGCCAAGAATTCACCCCTGCATCCCTCC
ACATACGGATGGATCTCACTACCTCCCAACTCAGCCTCCTGCCTTCAGATGCTCTGATGTCACC
ATCACCTCCGCAGACAGAAGGGGTTTCCATTTTTCCGTCTGTGTACCCCTTCACTCTCTCTCCT
TTCTAGAGGTTAAGGTCATGCCTCTTGTCTGCAGACTTAACCCCACAGCATCTCCTACCGTGAC
ACCTTCTGACCTTTTGCTGAACATTTATTTTGTTAGTCTCTCTAGGCTCAGATTACCCAGACTA
ATAGGTTCACAACCAACCAACCAACCAACAGACACACACACACACACACACACACACACACACA
CACACACAAACACCCCAGACTAATAGGTTCACAACCAACCAACCAACCAACAGACACACACACA
CACACACACACACACACACACAAACAAACACCCCAGACTAATAGGTTCACAACCAACCAACCAA
CCAACACCCCCCCACACACACACACACACACACACAAACTTGAACTGCAGGCTAGGTTAGCAAC
TAGTTGCAAGATGCCTGACCCTGCCAGGACCGTGTTGAATCCATTAGTGTTGTCTGTCAGGATC
TCAAATTTGATTAATTATGTCTGCCAAGGGCACAAAAGGGGAACAGTGGTGGAAGGAACAGCTA
GGTGTCTGCTCTCCTCTCTCAGATGGAAGAGCCTGACCTGAACTCCAGCCTTCCTTTGCCCTTC
TGCCACCTGGGAGTCATAGCCATAGCCTGTTCTATTCTGCTGTCTGGGTGCAAGGGGGGCTACT
TCTCCCATTTTCTCTCCTCTTTATGTGGTCCTCACCCAGCCTGGCCTTCCGGGGAGTGGGTGTC
TCTGAATGCTATACGGAAGTTGTCTTTATGACAGCTTAATTGGCATCCCCATAGTAAGCTCCCT
AGAGGCTGAGTCACCAGATCAGGGGGCCCCTCTGCTGGCTTGCACCCCCAGACTAAGAGGACCC
AGGCTGACTCAGAACCCAGCACGTACTGGACTCCAACTGTCTAGGAAGGCAAATGGCTTGGCTA
TTGATTGGAAGTTCATGGCTAGGTTGAGGACTTAGCCCAACCACAGCGGCTGCCACCCAGAACT
AGCCCAGGCTTCCAGAGATGGGCAGGGCTGGGACAGGGAGGGACTGAGAAGCCAGATATGGAGC
CTAGGCAATTCCAGGGCAGATCAGAGTCCCTCACCAGAACTTTCCACACTTACGCTGAAGCGCT
CCCAAGTAGCCCTGATTCAACCCAGCTTCTCAGCATCCTCATGGGGCCAGACAGACACAGTCTT
CACCCTCTGAGCTTGCTGGTAGCCATTGCAAGGCTGTCTGAGGTCATCCTGGTGGGGCTTGGTG
AGCTGCTCTGTGTACTCCCAGAGGAATGGAGGGGAGCTCTTCCTTCACCCCAAGATGCCTCAGC
CAGTAGTGAGCAGAACAGCCACTTCCTGTCCCAGAGCAGTGGCCTAAGGGACAGCTGTATCTGA
CAGGCGAGGAGCTAAGACTGGACCTGTGGCTCATGCTCCCCATTATCCTGTCCCAAGCCCCTGG
CCTACCTGGGTTCTGAACCCAGCACCTTCATCCCCAGGAACTCTGATACACACACACACACACA
CACACACACACACACACACACACACACACACACGTCATATGCTAAAGTCTATTTTGGAATTTGT
AAATGTCCCTTGCAGTAGGAAACAGAGCTAATTTATCATTGTATCTCCCAAGTCTCCCCTTTTT
ATATTCTATATTAAGAGAAATTTTGTAATATAAAACAGGACACCACGCA

hide sequence

RefSeq Acc Id:

XM_011239525 ⟹ XP_011237827

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	2	93,032,105 - 93,067,325 (-)	NCBI
GRCm38	2	93,201,760 - 93,236,980 (-)	NCBI

Sequence:

show sequence

TGACTGGGAAGATGTCCAGGACAAGCTGGGCTGCTGAGAGACATACCTGAGACCCTCTAACTAA
GAGATTGCATCCTGTTGACTCCTGAAGAGCTGCCCAGGTGAAGAACCATGGAGGGCGACTGTCT
GAGCTGCATGAAGTATCTGATGTTTGTTTTCAATTTCTTCGTTTTTCTGGGAGGCGCTTGCCTG
CTAGGTGTTGGCATCTGGGTCCTGGTGGACCCCACCGGCTTCCGAGAAATCGTGGCTACCAACC
CCCTGCTGACCACCGGTGCCTACATCGTACTGGCCATGGGTGGTCTGCTGTTTCTTCTGGGCTT
CCTGGGCTGCTGCGGGGCTGTCCGAGAGAACAGGTGTCTGCTGCTATTTTTCTTCCTGTTTATC
CTGATCATCTTCCTGGTAGAGCTCTCAGCAGCCATCCTGGCCTTCATCTTCAGAGAACACCTCA
CCCGAGAGTTCTTCACCAAGGAGCTTACCAAGCACTACCAAGGCGATAACGATACGGATGTTTT
CTCTGCCACCTGGAATTCAGTCATGATCACATTTGGCTGCTGTGGGGTCAACGGACCTGAAGAC
TTCAAGCTGGCCTCCGTGTTTCGGCTGCTGACGCTGGACACTGAGGAGGTGCCCAAGGCTTGCT
GTCGGAGGGAACCCCAGACTCGAGATGGAGTGGTGCTGAGCAGGGAGGAGTGCCAGCTGGGACG
GAATCCGTTCATAAACAAGCAGGGCTGTTATACAGTGATCCTCAACACCTTCGAAACCTATGTC
TACCTGGCCGGAGCCTTTGCCATTGGAGTACTGGCTATTGAGCTCTTCCTCATGGTCTTTGCCA
TGTGCCTCTTCCGGGGCATCCAGTAGGCCTTGGCCTGAAGACACTCAGCCCACCACTGCCCAGA
AGCCAGCCCCTTCTCTTCCCTGTCCTCTGGCCCCAGGGGCGGAAGCAAGGCCAGCCCAAACGGC
CAGAAGCATAGAGCTAATTTTTAAATAAACAAACAAACAAACAAAAAAGACAGACATGAAGGGG
CCTCACCTAGGCTCTAAAGCAAGGGGCATGGGCTCTACAAGGACCTAGGGCTGGCCTGGGACCA
GCTGTTCCTGAGACCAAAGGTTCATCAGCCTCAGAGCCCCTTGGCCCTGTCAGACTGGAGTGTC
CCTTGGCCCGGATCACCTCTCTTAGCATTTCCAGGATCAGAGCAACCAGGAGGTAGAAACACAT
CCTGGAGGAGGAGCCCGGTCCTCAGGCCCCAAGGAGCCGGCTTTTCACAACACAAGGACAGACT
CTGCAGCACCATCTGCTGGAGAGCGAAGCGGTCCCTGCTCCCGCTGGCTGAGGGTGGCTGTGTG
TGGACACTGGATCAGAAGGTGGCCCTTTCATTTCCGTCCAGTCACACAGCATGTGCATGACAAG
GTCATCTCCAGGCTGCTGTCGCTCCAGCCAGGACTCCACCCCGATGTAAACTGGCCAGGAACTG
CCTGCATCCAGCTCTACAGTCCGTACTGTGTCCACTCTGCCCTGCTTGTACCTCTGTCAGAGAT
CCAACTGTGATACATCACCTGTCCCCGTGGGCCATGCCCCACCCCTGTTCTCCCAGGTGGAAGA
CACCCCAGTATTGTTCATTTCTCTCTTTCTACCCAGAGCTGAGGCTTGAATGTGTTCTTCAAGG
TCCCTGCCAAGAATTCACCCCTGCATCCCTCCACATACGGATGGATCTCACTACCTCCCAACTC
AGCCTCCTGCCTTCAGATGCTCTGATGTCACCATCACCTCCGCAGACAGAAGGGGTTTCCATTT
TTCCGTCTGTGTACCCCTTCACTCTCTCTCCTTTCTAGAGGTTAAGGTCATGCCTCTTGTCTGC
AGACTTAACCCCACAGCATCTCCTACCGTGACACCTTCTGACCTTTTGCTGAACATTTATTTTG
TTAGTCTCTCTAGGCTCAGATTACCCAGACTAATAGGTTCACAACCAACCAACCAACCAACAGA
CACACACACACACACACACACACACACACACACACACACAAACACCCCAGACTAATAGGTTCAC
AACCAACCAACCAACCAACAGACACACACACACACACACACACACACACACACAAACAAACACC
CCAGACTAATAGGTTCACAACCAACCAACCAACCAACACCCCCCCACACACACACACACACACA
CACAAACTTGAACTGCAGGCTAGGTTAGCAACTAGTTGCAAGATGCCTGACCCTGCCAGGACCG
TGTTGAATCCATTAGTGTTGTCTGTCAGGATCTCAAATTTGATTAATTATGTCTGCCAAGGGCA
CAAAAGGGGAACAGTGGTGGAAGGAACAGCTAGGTGTCTGCTCTCCTCTCTCAGATGGAAGAGC
CTGACCTGAACTCCAGCCTTCCTTTGCCCTTCTGCCACCTGGGAGTCATAGCCATAGCCTGTTC
TATTCTGCTGTCTGGGTGCAAGGGGGGCTACTTCTCCCATTTTCTCTCCTCTTTATGTGGTCCT
CACCCAGCCTGGCCTTCCGGGGAGTGGGTGTCTCTGAATGCTATACGGAAGTTGTCTTTATGAC
AGCTTAATTGGCATCCCCATAGTAAGCTCCCTAGAGGCTGAGTCACCAGATCAGGGGGCCCCTC
TGCTGGCTTGCACCCCCAGACTAAGAGGACCCAGGCTGACTCAGAACCCAGCACGTACTGGACT
CCAACTGTCTAGGAAGGCAAATGGCTTGGCTATTGATTGGAAGTTCATGGCTAGGTTGAGGACT
TAGCCCAACCACAGCGGCTGCCACCCAGAACTAGCCCAGGCTTCCAGAGATGGGCAGGGCTGGG
ACAGGGAGGGACTGAGAAGCCAGATATGGAGCCTAGGCAATTCCAGGGCAGATCAGAGTCCCTC
ACCAGAACTTTCCACACTTACGCTGAAGCGCTCCCAAGTAGCCCTGATTCAACCCAGCTTCTCA
GCATCCTCATGGGGCCAGACAGACACAGTCTTCACCCTCTGAGCTTGCTGGTAGCCATTGCAAG
GCTGTCTGAGGTCATCCTGGTGGGGCTTGGTGAGCTGCTCTGTGTACTCCCAGAGGAATGGAGG
GGAGCTCTTCCTTCACCCCAAGATGCCTCAGCCAGTAGTGAGCAGAACAGCCACTTCCTGTCCC
AGAGCAGTGGCCTAAGGGACAGCTGTATCTGACAGGCGAGGAGCTAAGACTGGACCTGTGGCTC
ATGCTCCCCATTATCCTGTCCCAAGCCCCTGGCCTACCTGGGTTCTGAACCCAGCACCTTCATC
CCCAGGAACTCTGATACACACACACACACACACACACACACACACACACACACACACACACACA
CGTCATATGCTAAAGTCTATTTTGGAATTTGTAAATGTCCCTTGCAGTAGGAAACAGAGCTAAT
TTATCATTGTATCTCCCAAGTCTCCCCTTTTTATATTCTATATTAAGAGAAATTTTGTAATATA
AAACAGGACACCACGCA

hide sequence

Protein Sequences


Protein RefSeqs	NP_899003	(Get FASTA)	NCBI Sequence Viewer
	XP_006499537	(Get FASTA)	NCBI Sequence Viewer
	XP_006499538	(Get FASTA)	NCBI Sequence Viewer
	XP_006499539	(Get FASTA)	NCBI Sequence Viewer
	XP_006499540	(Get FASTA)	NCBI Sequence Viewer
	XP_011237827	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAH52169	(Get FASTA)	NCBI Sequence Viewer
	BAB27812	(Get FASTA)	NCBI Sequence Viewer
	EDL27619	(Get FASTA)	NCBI Sequence Viewer
	EDL27620	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSMUSP00000028646
	ENSMUSP00000028646.3
	ENSMUSP00000106896
	ENSMUSP00000106896.3
GenBank Protein	Q80WR1	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:

NP_899003 ⟸ NM_183180

- UniProtKB:

Q80WR1 (UniProtKB/Swiss-Prot)

- Sequence:

show sequence

MEGDCLSCMKYLMFVFNFFVFLGGACLLGVGIWVLVDPTGFREIVATNPLLTTGAYIVLAMGGL
LFLLGFLGCCGAVRENRCLLLFFFLFILIIFLVELSAAILAFIFREHLTREFFTKELTKHYQGD
NDTDVFSATWNSVMITFGCCGVNGPEDFKLASVFRLLTLDTEEVPKACCRREPQTRDGVVLSRE
ECQLGRNPFINKQGCYTVILNTFETYVYLAGAFAIGVLAIELFLMVFAMCLFRGIQ

hide sequence

RefSeq Acc Id:	XP_006499538 ⟸ XM_006499475
- Peptide Label:	isoform X1
- UniProtKB:	Q80WR1 (UniProtKB/Swiss-Prot)
- Sequence:	show sequence MEGDCLSCMKYLMFVFNFFVFLGGACLLGVGIWVLVDPTGFREIVATNPLLTTGAYIVLAMGGL LFLLGFLGCCGAVRENRCLLLFFFLFILIIFLVELSAAILAFIFREHLTREFFTKELTKHYQGD NDTDVFSATWNSVMITFGCCGVNGPEDFKLASVFRLLTLDTEEVPKACCRREPQTRDGVVLSRE ECQLGRNPFINKQGCYTVILNTFETYVYLAGAFAIGVLAIELFLMVFAMCLFRGIQ hide sequence

RefSeq Acc Id:	XP_006499539 ⟸ XM_006499476
- Peptide Label:	isoform X1
- UniProtKB:	Q80WR1 (UniProtKB/Swiss-Prot)
- Sequence:	show sequence MEGDCLSCMKYLMFVFNFFVFLGGACLLGVGIWVLVDPTGFREIVATNPLLTTGAYIVLAMGGL LFLLGFLGCCGAVRENRCLLLFFFLFILIIFLVELSAAILAFIFREHLTREFFTKELTKHYQGD NDTDVFSATWNSVMITFGCCGVNGPEDFKLASVFRLLTLDTEEVPKACCRREPQTRDGVVLSRE ECQLGRNPFINKQGCYTVILNTFETYVYLAGAFAIGVLAIELFLMVFAMCLFRGIQ hide sequence

RefSeq Acc Id:	XP_006499537 ⟸ XM_006499474
- Peptide Label:	isoform X1
- UniProtKB:	Q80WR1 (UniProtKB/Swiss-Prot)
- Sequence:	show sequence MEGDCLSCMKYLMFVFNFFVFLGGACLLGVGIWVLVDPTGFREIVATNPLLTTGAYIVLAMGGL LFLLGFLGCCGAVRENRCLLLFFFLFILIIFLVELSAAILAFIFREHLTREFFTKELTKHYQGD NDTDVFSATWNSVMITFGCCGVNGPEDFKLASVFRLLTLDTEEVPKACCRREPQTRDGVVLSRE ECQLGRNPFINKQGCYTVILNTFETYVYLAGAFAIGVLAIELFLMVFAMCLFRGIQ hide sequence

RefSeq Acc Id:	XP_006499540 ⟸ XM_006499477
- Peptide Label:	isoform X1
- UniProtKB:	Q80WR1 (UniProtKB/Swiss-Prot)
- Sequence:	show sequence MEGDCLSCMKYLMFVFNFFVFLGGACLLGVGIWVLVDPTGFREIVATNPLLTTGAYIVLAMGGL LFLLGFLGCCGAVRENRCLLLFFFLFILIIFLVELSAAILAFIFREHLTREFFTKELTKHYQGD NDTDVFSATWNSVMITFGCCGVNGPEDFKLASVFRLLTLDTEEVPKACCRREPQTRDGVVLSRE ECQLGRNPFINKQGCYTVILNTFETYVYLAGAFAIGVLAIELFLMVFAMCLFRGIQ hide sequence

RefSeq Acc Id:	XP_011237827 ⟸ XM_011239525
- Peptide Label:	isoform X1
- UniProtKB:	Q80WR1 (UniProtKB/Swiss-Prot)
- Sequence:	show sequence MEGDCLSCMKYLMFVFNFFVFLGGACLLGVGIWVLVDPTGFREIVATNPLLTTGAYIVLAMGGL LFLLGFLGCCGAVRENRCLLLFFFLFILIIFLVELSAAILAFIFREHLTREFFTKELTKHYQGD NDTDVFSATWNSVMITFGCCGVNGPEDFKLASVFRLLTLDTEEVPKACCRREPQTRDGVVLSRE ECQLGRNPFINKQGCYTVILNTFETYVYLAGAFAIGVLAIELFLMVFAMCLFRGIQ hide sequence

Ensembl Acc Id:

ENSMUSP00000106896 ⟸ ENSMUST00000111265

Ensembl Acc Id:

ENSMUSP00000028646 ⟸ ENSMUST00000028646

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-Q80WR1-F1-model_v2	AlphaFold	Q80WR1	1-248	view protein structure

Promoters

RGD ID:

6830771

Promoter ID:

MM_KWN:30641

Type:

CpG-Island

SO ACC ID:

SO:0000170

Source:

MPROMDB

Tissues & Cell Lines:

Brain

Transcripts:

ENSMUST00000024228, NM_183180, OTTMUST00000034488, OTTMUST00000034489, UC008LFU.1

Position:

Mouse Assembly	Chr	Position (strand)	Source
MGSCv36	2	93,174,556 - 93,175,056 (-)	MPROMDB

RGD ID:

6877990

Promoter ID:

EPDNEW_M2445

Type:

single initiation site

Name:

Tspan18_2

Description:

Mus musculus tetraspanin 18 , mRNA.

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Alternative Promoters:

null; see alsoEPDNEW_M2446

Experiment Methods:

Single-end sequencing.

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm38	2	93,243,677 - 93,243,737	EPDNEW

RGD ID:

6877992

Promoter ID:

EPDNEW_M2446

Type:

multiple initiation site

Name:

Tspan18_1

Description:

Mus musculus tetraspanin 18 , mRNA.

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Alternative Promoters:

null; see alsoEPDNEW_M2445

Experiment Methods:

Single-end sequencing.

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm38	2	93,334,487 - 93,334,547	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	MGI:1917186	AgrOrtholog
Ensembl Genes	ENSMUSG00000027217	Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript	ENSMUST00000028646	ENTREZGENE
	ENSMUST00000028646.4	UniProtKB/Swiss-Prot
	ENSMUST00000111265	ENTREZGENE
	ENSMUST00000111265.9	UniProtKB/Swiss-Prot
Gene3D-CATH	1.10.1450.10	UniProtKB/Swiss-Prot
InterPro	Tetraspanin	UniProtKB/Swiss-Prot
	Tetraspanin/Peripherin	UniProtKB/Swiss-Prot
	Tetraspanin_CS	UniProtKB/Swiss-Prot
	Tetraspanin_EC2_sf	UniProtKB/Swiss-Prot
KEGG Report	mmu:241556	UniProtKB/Swiss-Prot
MGD	MGI:1917186	ENTREZGENE
NCBI Gene	Tspan18	ENTREZGENE
PANTHER	PTHR19282	UniProtKB/Swiss-Prot
	TETRASPANIN-18	UniProtKB/Swiss-Prot
Pfam	Tetraspanin	UniProtKB/Swiss-Prot
PhenoGen	Tspan18	PhenoGen
PIRSF	Tetraspanin	UniProtKB/Swiss-Prot
PRINTS	TMFOUR	UniProtKB/Swiss-Prot
PROSITE	TM4_1	UniProtKB/Swiss-Prot
Superfamily-SCOP	SSF48652	UniProtKB/Swiss-Prot
UniProt	Q80WR1	ENTREZGENE, UniProtKB/Swiss-Prot

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2024-08-21	Tspan18	tetraspanin 18	2610042G18Rik	RIKEN cDNA 2610042G18 gene	Symbol and/or name change	5135510	APPROVED
2024-08-21	2610042G18Rik	RIKEN cDNA 2610042G18 gene	Tspan18	tetraspanin 18	Symbol and/or name change	5135510	APPROVED

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

Mammalian Phenotype

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Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

Mammalian Phenotype