Apbb2 (amyloid beta precursor protein binding family B member 2) - Rat Genome Database

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Gene: Apbb2 (amyloid beta precursor protein binding family B member 2) Mus musculus
Analyze
Symbol: Apbb2
Name: amyloid beta precursor protein binding family B member 2
RGD ID: 1558141
MGI Page MGI
Description: Predicted to enable amyloid-beta binding activity and molecular adaptor activity. Involved in maintenance of lens transparency and smooth muscle contraction. Acts upstream of or within extracellular matrix organization; generation of neurons; and regulation of apoptotic process. Located in cytoplasm. Is expressed in several structures, including alimentary system; brain; eye; genitourinary system; and hemolymphoid system gland. Human ortholog(s) of this gene implicated in Alzheimer's disease and cognitive disorder. Orthologous to human APBB2 (amyloid beta precursor protein binding family B member 2).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: 2310007D03Rik; amyloid beta (A4) precursor protein-binding, family B, member 2; amyloid beta A4 precursor protein-binding family B member 2; amyloid-beta A4 precursor protein-binding family B member 2; FE65L; FE65L1; R; Rirl1; TR; TR2L; Zf; Zfra; zinc finger-like protein
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39566,456,068 - 66,779,189 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl566,456,046 - 66,776,127 (-)EnsemblGRCm39 EnsemblGRCm39
GRCm38566,298,725 - 66,619,064 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl566,298,703 - 66,618,784 (-)Ensemblmm10GRCm38
MGSCv37566,693,127 - 67,009,910 (-)NCBIMGSCv37MGSCv37mm9NCBIm37
MGSCv36566,581,023 - 66,897,806 (-)NCBIMGSCv36mm8
Celera563,600,514 - 63,917,425 (-)NCBICelera
Cytogenetic Map5C3.1NCBI
cM Map534.43NCBI
JBrowse:




Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(-)-epigallocatechin 3-gallate  (ISO)
1,2-dichloroethane  (EXP)
1,2-dimethylhydrazine  (EXP)
17alpha-ethynylestradiol  (EXP)
17beta-estradiol  (EXP)
2,3,4,7,8-Pentachlorodibenzofuran  (ISO)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2,3,7,8-Tetrachlorodibenzofuran  (EXP,ISO)
2-hydroxypropanoic acid  (ISO)
2-palmitoylglycerol  (ISO)
4-hydroxyphenyl retinamide  (EXP)
5-fluorouracil  (ISO)
6-propyl-2-thiouracil  (ISO)
acrolein  (ISO)
aflatoxin B1  (EXP,ISO)
all-trans-retinoic acid  (ISO)
alpha-pinene  (ISO)
amphetamine  (ISO)
amphotericin B  (ISO)
antirheumatic drug  (ISO)
aristolochic acid A  (ISO)
arsenite(3-)  (ISO)
arsenous acid  (EXP,ISO)
atrazine  (ISO)
benzo[a]pyrene  (EXP,ISO)
benzo[a]pyrene diol epoxide I  (ISO)
benzo[e]pyrene  (ISO)
bis(2-ethylhexyl) phthalate  (ISO)
bisphenol A  (ISO)
bisphenol F  (ISO)
cadmium atom  (ISO)
cadmium dichloride  (ISO)
carbamazepine  (ISO)
chloroprene  (ISO)
chlorpyrifos  (EXP)
chromium(6+)  (ISO)
cisplatin  (ISO)
cobalt dichloride  (ISO)
copper(II) sulfate  (ISO)
coumestrol  (ISO)
cyclosporin A  (ISO)
diarsenic trioxide  (EXP,ISO)
dieldrin  (ISO)
diquat  (EXP)
diuron  (ISO)
dorsomorphin  (ISO)
doxorubicin  (ISO)
Enterolactone  (ISO)
entinostat  (ISO)
epoxiconazole  (EXP)
FR900359  (ISO)
fulvestrant  (ISO)
geraniol  (ISO)
menadione  (ISO)
methapyrilene  (ISO)
methylmercury chloride  (ISO)
nickel dichloride  (ISO)
okadaic acid  (ISO)
oxaliplatin  (ISO)
ozone  (ISO)
paracetamol  (EXP,ISO)
picoxystrobin  (ISO)
potassium chromate  (ISO)
propiconazole  (EXP)
quercetin  (ISO)
quinolin-8-ol  (ISO)
rac-lactic acid  (ISO)
resorcinol  (ISO)
rotenone  (ISO)
SB 431542  (ISO)
silicon dioxide  (ISO)
sodium arsenite  (ISO)
sunitinib  (ISO)
tetrachloromethane  (EXP)
thioacetamide  (ISO)
titanium dioxide  (EXP)
topotecan  (ISO)
torcetrapib  (ISO)
trichostatin A  (ISO)
triphenyl phosphate  (ISO)
triptonide  (EXP)
troglitazone  (EXP)
valproic acid  (ISO)
vitamin E  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component
cytoplasm  (IBA,IDA,IEA)
early endosome  (IEA,ISO,ISS)
endoplasmic reticulum  (IEA,ISO,ISS)
endosome  (IEA)
Golgi apparatus  (IEA,ISO,ISS)
nucleus  (IBA,IEA,ISO)

Molecular Function

Phenotype Annotations     Click to see Annotation Detail View
References

References - curated
# Reference Title Reference Citation
1. APBB2 genetic polymorphisms are associated with severe cognitive impairment in centenarians. Golanska E, etal., Exp Gerontol. 2013 Apr;48(4):391-4. doi: 10.1016/j.exger.2013.01.013. Epub 2013 Feb 4.
2. Functional annotation of a full-length mouse cDNA collection. Kawai J, etal., Nature. 2001 Feb 8;409(6821):685-90.
3. Genetic association of the APP binding protein 2 gene (APBB2) with late onset Alzheimer disease. Li Y, etal., Hum Mutat. 2005 Mar;25(3):270-7.
4. MGDs mouse GO annotations MGD data from the GO Consortium
5. Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73.
6. OMIM Disease Annotation Pipeline OMIM Disease Annotation Pipeline
7. Mouse MP Annotation Import Pipeline RGD automated import pipeline
8. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
9. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:2431283   PMID:8858135   PMID:9546346   PMID:10349636   PMID:10922068   PMID:11027557   PMID:11042159   PMID:11076861   PMID:11180952   PMID:11544248   PMID:12089154   PMID:12477932  
PMID:12520002   PMID:12904583   PMID:14610273   PMID:15489334   PMID:15629131   PMID:15761153   PMID:15782199   PMID:16083851   PMID:16141072   PMID:16141073   PMID:16407979   PMID:16964442  
PMID:17967808   PMID:18650440   PMID:18799693   PMID:19233709   PMID:21267068   PMID:21824144   PMID:21873635   PMID:24194600   PMID:25757569   PMID:27734846   PMID:32325033   PMID:32554809  
PMID:34321999   PMID:35449600   PMID:36498839   PMID:38355793  


Genomics

Comparative Map Data
Apbb2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39566,456,068 - 66,779,189 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl566,456,046 - 66,776,127 (-)EnsemblGRCm39 EnsemblGRCm39
GRCm38566,298,725 - 66,619,064 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl566,298,703 - 66,618,784 (-)Ensemblmm10GRCm38
MGSCv37566,693,127 - 67,009,910 (-)NCBIMGSCv37MGSCv37mm9NCBIm37
MGSCv36566,581,023 - 66,897,806 (-)NCBIMGSCv36mm8
Celera563,600,514 - 63,917,425 (-)NCBICelera
Cytogenetic Map5C3.1NCBI
cM Map534.43NCBI
APBB2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38440,810,027 - 41,214,542 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl440,810,027 - 41,216,714 (-)Ensemblhg38GRCh38
GRCh37440,812,044 - 41,216,559 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36440,510,996 - 40,911,245 (-)NCBIBuild 36Build 36hg18NCBI36
Build 34440,657,166 - 41,057,416NCBI
Celera441,255,358 - 41,659,952 (-)NCBICelera
Cytogenetic Map4p14-p13NCBI
HuRef440,134,003 - 40,538,593 (-)NCBIHuRef
CHM1_1440,811,768 - 41,216,779 (-)NCBICHM1_1
T2T-CHM13v2.0440,783,978 - 41,188,337 (-)NCBIT2T-CHM13v2.0
Apbb2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81441,849,638 - 42,232,930 (+)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl1441,911,785 - 42,232,280 (+)EnsemblGRCr8
mRatBN7.21441,557,918 - 41,878,622 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1441,557,972 - 41,877,495 (+)EnsemblmRatBN7.2
Rnor_6.01443,205,047 - 43,526,968 (+)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1443,512,901 - 43,523,080 (+)Ensemblrn6Rnor6.0
Rnor_5.01443,126,873 - 43,315,801 (+)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.41444,197,568 - 44,526,047 (+)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera1440,786,859 - 41,031,083 (+)NCBICelera
Cytogenetic Map14p11NCBI
Apbb2
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554436,513,980 - 6,783,014 (+)Ensembl
ChiLan1.0NW_0049554436,513,762 - 6,786,247 (+)NCBIChiLan1.0ChiLan1.0
APBB2
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2340,994,121 - 41,397,477 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1441,186,549 - 41,591,159 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0435,133,490 - 35,538,443 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1440,984,632 - 41,386,264 (-)NCBIPanPan1.1PanPan1.1panPan2
PanPan1.1 Ensembl440,988,428 - 41,189,064 (-)EnsemblpanPan2panpan1.1
APBB2
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1371,454,814 - 71,830,482 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl371,454,585 - 71,826,749 (+)EnsemblcanFam3CanFam3.1
Dog10K_Boxer_Tasha374,004,793 - 74,379,285 (+)NCBIDog10K_Boxer_TashaDog10K_Boxer_Tasha
ROS_Cfam_1.0372,215,300 - 72,590,507 (+)NCBIROS_Cfam_1.0ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl372,215,204 - 72,588,489 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1371,492,277 - 71,866,478 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0371,647,497 - 72,022,440 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0372,031,249 - 72,406,523 (+)NCBIUU_Cfam_GSD_1.0UU_Cfam_GSD_1.0
Apbb2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440528537,746,664 - 38,134,814 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049364828,167,173 - 8,340,300 (-)EnsemblSpeTri2.0 Ensembl
SpeTri2.0NW_0049364828,166,380 - 8,489,489 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
APBB2
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl831,921,593 - 32,193,940 (-)EnsemblsusScr11Sscrofa11.1
Sscrofa11.1831,921,587 - 32,302,237 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2833,221,452 - 33,426,852 (+)NCBISscrofa10.2Sscrofa10.2susScr3
APBB2
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1279,130,947 - 9,530,897 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl279,311,146 - 9,534,105 (+)EnsemblChlSab1.1 EnsemblchlSab2Vervet-AGM
Vero_WHO_p1.0NW_02366604755,463,239 - 55,867,809 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Apbb2
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462476125,924,714 - 26,262,386 (+)EnsemblHetGla_female_1.0 EnsemblhetGla2HetGla_female_1.0 Ensembl
HetGla 1.0NW_00462476125,924,747 - 26,265,763 (+)NCBIHetGla 1.0HetGla 1.0hetGla2

Variants

.
Variants in Apbb2
18905 total Variants
miRNA Target Status (No longer updated)

Predicted Target Of
Summary Value
Count of predictions:3814
Count of miRNA genes:851
Interacting mature miRNAs:1177
Transcripts:ENSMUST00000087256, ENSMUST00000159357, ENSMUST00000159512, ENSMUST00000159786, ENSMUST00000159847, ENSMUST00000160054, ENSMUST00000160063, ENSMUST00000160103, ENSMUST00000160185, ENSMUST00000160775, ENSMUST00000160870, ENSMUST00000161716, ENSMUST00000161771, ENSMUST00000161879, ENSMUST00000161936, ENSMUST00000162349, ENSMUST00000162366, ENSMUST00000162382, ENSMUST00000162401, ENSMUST00000162955, ENSMUST00000162994
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1301843Listr1_mlisteriosis resistance 1 (mouse)Not determined56024608194246203Mouse
1301010ahl2_mage related hearing loss 2 (mouse)Not determined56265056896650688Mouse
4140990Lgq6_mlate growth QTL 6 (mouse)Not determined32133234100777931Mouse
10043995Hbnr9_mHeligmosomoides bakeri nematode resistance 9 (mouse)Not determined53348866767488876Mouse
11041899Lmr24a_mleishmaniasis resistance 24a (mouse)552694462107321041Mouse
1300951Gbvq1_mgallstone bladder volume QTL 1 (mouse)Not determined53811168172111798Mouse
14746981Manh57_mmandible shape 57 (mouse)54716974281169742Mouse
1301845Lxw4_mlupus BXSB x NZW 4 (mouse)Not determined53569446269694594Mouse
1301524Lmb2_mlupus in MRL and B6 F2 cross (mouse)Not determined537581488112465722Mouse
10045972Tir5_mtrypanosome infection response 5 (mouse)Not determined563705442104387065Mouse
4142064Tmc1m4_mTmc1 modifier 4 (mouse)Not determined554500177127001072Mouse
1301698Pcfm4_mperiosteal circumference and femur length 4 (mouse)Not determined54458584378585965Mouse
4142317Rgcs1_mretinal ganglion cell susceptible 1 (mouse)Not determined55388334108762627Mouse
4141219W10q16_mweight 10 weeks QTL 16 (mouse)Not determined32133234100777931Mouse
12904740M1fscn2_mmodifier 1 of Fscn2 (mouse)566529661100529661Mouse
1301170Lith13_mlithogenic gene 13 (mouse)Not determined53649448670494598Mouse
10043962Obq27_mobesity QTL 27 (mouse)Not determined55628565590285655Mouse
4142428Modvl1_mmodifier of vacuolated lens 1 (mouse)Not determined6265056896650688Mouse
11040589Lmr3a_mleishmaniasis resistance 3a (mouse)55960280193602980Mouse
11040590Lmr3b_mleishmaniasis resistance 3b (mouse)55960280193602980Mouse
11040591Lmr3c_mleishmaniasis resistance 3c (mouse)55960280193602980Mouse
12904739M2fscn2_mmodifier 2 of FSCN2 (mouse)566529661100529661Mouse
1301243Bmd2_mbone mineral density 2 (mouse)Not determined555388334100455525Mouse
13207584Mwmlpt4_mMorris water maze latency to platform, training, 4 (mouse)54632260680322606Mouse
11041665Lmr24_mleishmaniasis resistance 24 (mouse)552694462107321041Mouse
13207588Mwmlpa4_mMorris water maze latency to platform, all, 4 (mouse)54632260680322606Mouse
1301693Sle6_msystemic lupus erythematosus susceptibility 6 (mouse)Not determined5889069387841837Mouse
4141647Hrvhf1_mheart rate variability, high frequency 1 (mouse)Not determined3643342370433423Mouse
11049560Lmr24d_mleishmaniasis resistance 24d (mouse)56437487798374996Mouse
13464252Ahl10_mage related hearing loss, early onset 10 (mouse)53585456869854714Mouse
11049561Lmr24e_mleishmaniasis resistance 24e (mouse)53569446269694594Mouse
1301223Hdlq7_mHDL QTL 7 (mouse)Not determined53585456869854714Mouse
13464248Ahl13_mage related hearing loss, early onset 13 (mouse)55564587489645995Mouse
11252124Modvl6_mmodifier of vacuolated lens 6 (mouse)56265056896650688Mouse
13464250Ahl15_mage related hearing loss, early onset 15 (mouse)56265056896650688Mouse
11040592Lmr3d_mleishmaniasis resistance 3d (mouse)55960280193602980Mouse
13464245Ahl12_mage related hearing loss, early onset 12 (mouse)53811168172111798Mouse
11341716Rvfs3_mRift Valley fever susceptibility 3 (mouse)526441234138455402Mouse
13464247Ahl14_mage related hearing loss, early onset 14 (mouse)56040306294403160Mouse
13464246Ahl11_mage related hearing loss, early onset 11 (mouse)53764377771643896Mouse
10044005Ahl7_mage related hearing loss 7 (mouse)Not determined55833050292330641Mouse
11049558Lmr24b_mleishmaniasis resistance 24b (mouse)53569446269694594Mouse
11049559Lmr24c_mleishmaniasis resistance 24c (mouse)53569446269694594Mouse

Markers in Region
RH136211  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38566,393,962 - 66,394,162UniSTSGRCm38
MGSCv37566,785,201 - 66,785,401UniSTSGRCm37
Celera563,693,013 - 63,693,213UniSTS
Cytogenetic Map5C3.1UniSTS
Apbb2  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38566,302,266 - 66,302,622UniSTSGRCm38
MGSCv37566,693,505 - 66,693,861UniSTSGRCm37
Celera563,600,892 - 63,601,248UniSTS
Cytogenetic Map5C3.1UniSTS
cM Map5 UniSTS
RH118289  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38566,444,279 - 66,444,353UniSTSGRCm38
MGSCv37566,835,518 - 66,835,592UniSTSGRCm37
Celera563,743,439 - 63,743,513UniSTS
Cytogenetic Map5C3.1UniSTS
RH125131  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map5C3.1UniSTS
Cytogenetic Map7E3UniSTS
cM Map746.6UniSTS


Expression

RNA-SEQ Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001201413 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001201414 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001201415 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001201416 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001310626 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_009686 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006503688 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006503690 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006503691 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006503692 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006503693 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006503694 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006503696 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006503697 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011240693 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017320620 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017320622 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030254078 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030254079 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030254080 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030254081 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030254082 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036164746 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036164747 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036164748 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036164749 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC123049 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC131752 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC149587 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC165426 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF133665 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK004792 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK009197 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK032770 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK033397 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK086645 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK153260 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK167649 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK169495 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK169959 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK172405 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK178086 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK182824 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK183807 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK185823 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK191251 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK196430 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK202194 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK206784 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK207143 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK210943 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK217352 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK217513 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AY650904 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC022590 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC038035 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC042797 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC076587 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BY333882 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466524 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  U70210 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSMUST00000087256   ⟹   ENSMUSP00000084511
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl566,459,231 - 66,776,014 (-)Ensembl
GRCm38.p6 Ensembl566,301,888 - 66,618,671 (-)Ensembl
Ensembl Acc Id: ENSMUST00000159357   ⟹   ENSMUSP00000124127
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl566,609,604 - 66,672,180 (-)Ensembl
GRCm38.p6 Ensembl566,452,261 - 66,514,837 (-)Ensembl
Ensembl Acc Id: ENSMUST00000159512   ⟹   ENSMUSP00000124807
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl566,456,071 - 66,776,127 (-)Ensembl
GRCm38.p6 Ensembl566,298,728 - 66,618,784 (-)Ensembl
Ensembl Acc Id: ENSMUST00000159786   ⟹   ENSMUSP00000125211
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl566,456,183 - 66,776,006 (-)Ensembl
GRCm38.p6 Ensembl566,298,840 - 66,618,663 (-)Ensembl
Ensembl Acc Id: ENSMUST00000159847
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl566,698,045 - 66,776,031 (-)Ensembl
GRCm38.p6 Ensembl566,540,702 - 66,618,688 (-)Ensembl
Ensembl Acc Id: ENSMUST00000160063   ⟹   ENSMUSP00000123778
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl566,459,548 - 66,649,514 (-)Ensembl
GRCm38.p6 Ensembl566,302,205 - 66,492,171 (-)Ensembl
Ensembl Acc Id: ENSMUST00000160103   ⟹   ENSMUSP00000123766
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl566,609,367 - 66,776,014 (-)Ensembl
GRCm38.p6 Ensembl566,452,024 - 66,618,671 (-)Ensembl
Ensembl Acc Id: ENSMUST00000160185
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl566,556,965 - 66,776,026 (-)Ensembl
GRCm38.p6 Ensembl566,399,622 - 66,618,683 (-)Ensembl
Ensembl Acc Id: ENSMUST00000160775
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl566,459,215 - 66,495,025 (-)Ensembl
GRCm38.p6 Ensembl566,301,872 - 66,337,682 (-)Ensembl
Ensembl Acc Id: ENSMUST00000160870   ⟹   ENSMUSP00000123978
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl566,456,071 - 66,776,024 (-)Ensembl
GRCm38.p6 Ensembl566,298,728 - 66,618,681 (-)Ensembl
Ensembl Acc Id: ENSMUST00000161716   ⟹   ENSMUSP00000124350
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl566,609,610 - 66,704,300 (-)Ensembl
GRCm38.p6 Ensembl566,452,267 - 66,546,957 (-)Ensembl
Ensembl Acc Id: ENSMUST00000161771
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl566,464,926 - 66,494,826 (-)Ensembl
GRCm38.p6 Ensembl566,307,583 - 66,337,483 (-)Ensembl
Ensembl Acc Id: ENSMUST00000161879   ⟹   ENSMUSP00000125550
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl566,609,338 - 66,672,173 (-)Ensembl
GRCm38.p6 Ensembl566,451,995 - 66,514,830 (-)Ensembl
Ensembl Acc Id: ENSMUST00000161936
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl566,619,257 - 66,776,015 (-)Ensembl
GRCm38.p6 Ensembl566,461,914 - 66,618,672 (-)Ensembl
Ensembl Acc Id: ENSMUST00000162349   ⟹   ENSMUSP00000123752
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl566,459,231 - 66,776,014 (-)Ensembl
GRCm38.p6 Ensembl566,301,888 - 66,618,671 (-)Ensembl
Ensembl Acc Id: ENSMUST00000162366   ⟹   ENSMUSP00000125116
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl566,456,068 - 66,776,101 (-)Ensembl
GRCm38.p6 Ensembl566,298,725 - 66,618,758 (-)Ensembl
Ensembl Acc Id: ENSMUST00000162382   ⟹   ENSMUSP00000124139
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl566,609,325 - 66,775,983 (-)Ensembl
GRCm38.p6 Ensembl566,451,982 - 66,618,640 (-)Ensembl
Ensembl Acc Id: ENSMUST00000162401
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl566,556,965 - 66,776,013 (-)Ensembl
GRCm38.p6 Ensembl566,399,622 - 66,618,670 (-)Ensembl
Ensembl Acc Id: ENSMUST00000162955
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl566,456,046 - 66,471,071 (-)Ensembl
GRCm38.p6 Ensembl566,298,703 - 66,313,728 (-)Ensembl
Ensembl Acc Id: ENSMUST00000162994   ⟹   ENSMUSP00000125603
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl566,609,571 - 66,776,117 (-)Ensembl
GRCm38.p6 Ensembl566,452,228 - 66,618,774 (-)Ensembl
Ensembl Acc Id: ENSMUST00000201776
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl566,458,004 - 66,649,515 (-)Ensembl
GRCm38.p6 Ensembl566,300,661 - 66,492,172 (-)Ensembl
RefSeq Acc Id: NM_001201413   ⟹   NP_001188342
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39566,456,068 - 66,776,129 (-)NCBI
GRCm38566,298,725 - 66,618,817 (-)NCBI
Celera563,597,353 - 63,917,571 (-)ENTREZGENE
cM Map5 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_001201414   ⟹   NP_001188343
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39566,456,068 - 66,776,129 (-)NCBI
GRCm38566,298,725 - 66,618,817 (-)NCBI
Celera563,597,353 - 63,917,571 (-)ENTREZGENE
cM Map5 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_001201415   ⟹   NP_001188344
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39566,456,068 - 66,776,129 (-)NCBI
GRCm38566,298,725 - 66,618,817 (-)NCBI
Celera563,597,353 - 63,917,571 (-)ENTREZGENE
cM Map5 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_001201416   ⟹   NP_001188345
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39566,456,068 - 66,495,008 (-)NCBI
GRCm38566,298,725 - 66,337,665 (-)NCBI
Celera563,597,353 - 63,917,571 (-)ENTREZGENE
cM Map5 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_001310626   ⟹   NP_001297555
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39566,456,068 - 66,776,129 (-)NCBI
GRCm38566,298,725 - 66,618,817 (-)NCBI
Sequence:
RefSeq Acc Id: NM_009686   ⟹   NP_033816
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39566,456,068 - 66,776,129 (-)NCBI
GRCm38566,298,725 - 66,618,817 (-)NCBI
MGSCv37566,693,127 - 67,009,910 (-)RGD
Celera563,597,353 - 63,917,571 (-)ENTREZGENE
cM Map5 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_006503688   ⟹   XP_006503751
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39566,456,183 - 66,777,869 (-)NCBI
GRCm38566,298,725 - 66,619,063 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006503690   ⟹   XP_006503753
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39566,456,183 - 66,779,189 (-)NCBI
GRCm38566,299,099 - 66,619,064 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006503691   ⟹   XP_006503754
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39566,456,183 - 66,779,189 (-)NCBI
GRCm38566,298,725 - 66,619,063 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006503692   ⟹   XP_006503755
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39566,456,183 - 66,779,189 (-)NCBI
GRCm38566,299,099 - 66,619,064 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006503693   ⟹   XP_006503756
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39566,456,183 - 66,779,189 (-)NCBI
GRCm38566,298,725 - 66,619,063 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006503694   ⟹   XP_006503757
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39566,456,183 - 66,779,189 (-)NCBI
GRCm38566,298,725 - 66,619,063 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006503696   ⟹   XP_006503759
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39566,456,118 - 66,497,386 (-)NCBI
GRCm38566,298,725 - 66,340,052 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006503697   ⟹   XP_006503760
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39566,456,118 - 66,497,386 (-)NCBI
GRCm38566,298,725 - 66,340,052 (-)NCBI
Sequence:
RefSeq Acc Id: XM_011240693   ⟹   XP_011238995
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39566,456,183 - 66,779,189 (-)NCBI
GRCm38566,299,099 - 66,619,064 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017320620   ⟹   XP_017176109
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39566,456,183 - 66,779,189 (-)NCBI
GRCm38566,298,725 - 66,619,063 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017320622   ⟹   XP_017176111
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39566,456,183 - 66,579,221 (-)NCBI
GRCm38566,298,725 - 66,422,775 (-)NCBI
Sequence:
RefSeq Acc Id: XM_030254078   ⟹   XP_030109938
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39566,456,183 - 66,779,189 (-)NCBI
GRCm38566,298,725 - 66,619,063 (-)NCBI
Sequence:
RefSeq Acc Id: XM_030254079   ⟹   XP_030109939
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39566,456,183 - 66,779,189 (-)NCBI
GRCm38566,298,725 - 66,619,064 (-)NCBI
Sequence:
RefSeq Acc Id: XM_030254080   ⟹   XP_030109940
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39566,456,183 - 66,779,189 (-)NCBI
GRCm38566,298,725 - 66,619,063 (-)NCBI
Sequence:
RefSeq Acc Id: XM_030254081   ⟹   XP_030109941
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39566,456,183 - 66,779,189 (-)NCBI
GRCm38566,298,725 - 66,619,063 (-)NCBI
Sequence:
RefSeq Acc Id: XM_030254082   ⟹   XP_030109942
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39566,456,183 - 66,779,189 (-)NCBI
GRCm38566,299,099 - 66,619,064 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036164746   ⟹   XP_036020639
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39566,456,183 - 66,707,054 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036164747   ⟹   XP_036020640
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39566,456,183 - 66,707,054 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036164748   ⟹   XP_036020641
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39566,456,183 - 66,779,189 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036164749   ⟹   XP_036020642
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39566,465,064 - 66,779,189 (-)NCBI
Sequence:
Protein Sequences
Protein RefSeqs NP_001188342 (Get FASTA)   NCBI Sequence Viewer  
  NP_001188343 (Get FASTA)   NCBI Sequence Viewer  
  NP_001188344 (Get FASTA)   NCBI Sequence Viewer  
  NP_001188345 (Get FASTA)   NCBI Sequence Viewer  
  NP_001297555 (Get FASTA)   NCBI Sequence Viewer  
  NP_033816 (Get FASTA)   NCBI Sequence Viewer  
  XP_006503751 (Get FASTA)   NCBI Sequence Viewer  
  XP_006503753 (Get FASTA)   NCBI Sequence Viewer  
  XP_006503754 (Get FASTA)   NCBI Sequence Viewer  
  XP_006503755 (Get FASTA)   NCBI Sequence Viewer  
  XP_006503756 (Get FASTA)   NCBI Sequence Viewer  
  XP_006503757 (Get FASTA)   NCBI Sequence Viewer  
  XP_006503759 (Get FASTA)   NCBI Sequence Viewer  
  XP_006503760 (Get FASTA)   NCBI Sequence Viewer  
  XP_011238995 (Get FASTA)   NCBI Sequence Viewer  
  XP_017176109 (Get FASTA)   NCBI Sequence Viewer  
  XP_017176111 (Get FASTA)   NCBI Sequence Viewer  
  XP_030109938 (Get FASTA)   NCBI Sequence Viewer  
  XP_030109939 (Get FASTA)   NCBI Sequence Viewer  
  XP_030109940 (Get FASTA)   NCBI Sequence Viewer  
  XP_030109941 (Get FASTA)   NCBI Sequence Viewer  
  XP_030109942 (Get FASTA)   NCBI Sequence Viewer  
  XP_036020639 (Get FASTA)   NCBI Sequence Viewer  
  XP_036020640 (Get FASTA)   NCBI Sequence Viewer  
  XP_036020641 (Get FASTA)   NCBI Sequence Viewer  
  XP_036020642 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAC53593 (Get FASTA)   NCBI Sequence Viewer  
  AAD55360 (Get FASTA)   NCBI Sequence Viewer  
  AAH76587 (Get FASTA)   NCBI Sequence Viewer  
  AAT67158 (Get FASTA)   NCBI Sequence Viewer  
  BAB23568 (Get FASTA)   NCBI Sequence Viewer  
  BAC28014 (Get FASTA)   NCBI Sequence Viewer  
  BAE31851 (Get FASTA)   NCBI Sequence Viewer  
  BAE39700 (Get FASTA)   NCBI Sequence Viewer  
  BAE41200 (Get FASTA)   NCBI Sequence Viewer  
  BAE41482 (Get FASTA)   NCBI Sequence Viewer  
  BAE42990 (Get FASTA)   NCBI Sequence Viewer  
  EDL37768 (Get FASTA)   NCBI Sequence Viewer  
  EDL37769 (Get FASTA)   NCBI Sequence Viewer  
  EDL37770 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSMUSP00000123752
  ENSMUSP00000123752.3
  ENSMUSP00000123978
  ENSMUSP00000124807
  ENSMUSP00000125116
  ENSMUSP00000125211
  ENSMUSP00000125211.3
GenBank Protein Q9DBR4 (Get FASTA)   NCBI Sequence Viewer  
RefSeq Acc Id: NP_033816   ⟸   NM_009686
- Peptide Label: isoform 1
- UniProtKB: Q6DFX8 (UniProtKB/Swiss-Prot),   Q9DBR4 (UniProtKB/Swiss-Prot),   Q3U674 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001188344   ⟸   NM_001201415
- Peptide Label: isoform 4
- UniProtKB: Q3U674 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001188342   ⟸   NM_001201413
- Peptide Label: isoform 2
- UniProtKB: Q3TIZ5 (UniProtKB/TrEMBL),   Q3U674 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001188343   ⟸   NM_001201414
- Peptide Label: isoform 3
- UniProtKB: E9PWH3 (UniProtKB/TrEMBL),   Q3U674 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001188345   ⟸   NM_001201416
- Peptide Label: isoform 5
- UniProtKB: Q3T9N0 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006503759   ⟸   XM_006503696
- Peptide Label: isoform X13
- UniProtKB: Q3T9N0 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006503760   ⟸   XM_006503697
- Peptide Label: isoform X13
- UniProtKB: Q3T9N0 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006503754   ⟸   XM_006503691
- Peptide Label: isoform X1
- UniProtKB: Q3U674 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006503753   ⟸   XM_006503690
- Peptide Label: isoform X1
- UniProtKB: Q3U674 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006503757   ⟸   XM_006503694
- Peptide Label: isoform X8
- UniProtKB: E9PWH3 (UniProtKB/TrEMBL),   Q3U674 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006503756   ⟸   XM_006503693
- Peptide Label: isoform X6
- UniProtKB: Q3U674 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006503755   ⟸   XM_006503692
- Peptide Label: isoform X5
- UniProtKB: Q3U674 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006503751   ⟸   XM_006503688
- Peptide Label: isoform X1
- UniProtKB: Q3U674 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_011238995   ⟸   XM_011240693
- Peptide Label: isoform X3
- UniProtKB: Q3U674 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001297555   ⟸   NM_001310626
- Peptide Label: isoform 6
- UniProtKB: Q3TDW6 (UniProtKB/TrEMBL),   Q3U674 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_017176111   ⟸   XM_017320622
- Peptide Label: isoform X12
- Sequence:
RefSeq Acc Id: XP_017176109   ⟸   XM_017320620
- Peptide Label: isoform X4
- UniProtKB: Q3U674 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_030109939   ⟸   XM_030254079
- Peptide Label: isoform X2
- UniProtKB: Q9DBR4 (UniProtKB/Swiss-Prot),   Q6DFX8 (UniProtKB/Swiss-Prot),   Q3U674 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_030109941   ⟸   XM_030254081
- Peptide Label: isoform X7
- UniProtKB: Q3U674 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_030109938   ⟸   XM_030254078
- Peptide Label: isoform X2
- UniProtKB: Q9DBR4 (UniProtKB/Swiss-Prot),   Q6DFX8 (UniProtKB/Swiss-Prot),   Q3U674 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_030109940   ⟸   XM_030254080
- Peptide Label: isoform X7
- UniProtKB: Q3U674 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_030109942   ⟸   XM_030254082
- Peptide Label: isoform X10
- UniProtKB: Q3U674 (UniProtKB/TrEMBL)
Ensembl Acc Id: ENSMUSP00000124127   ⟸   ENSMUST00000159357
Ensembl Acc Id: ENSMUSP00000124807   ⟸   ENSMUST00000159512
Ensembl Acc Id: ENSMUSP00000125211   ⟸   ENSMUST00000159786
Ensembl Acc Id: ENSMUSP00000084511   ⟸   ENSMUST00000087256
Ensembl Acc Id: ENSMUSP00000123766   ⟸   ENSMUST00000160103
Ensembl Acc Id: ENSMUSP00000123778   ⟸   ENSMUST00000160063
Ensembl Acc Id: ENSMUSP00000123978   ⟸   ENSMUST00000160870
Ensembl Acc Id: ENSMUSP00000125603   ⟸   ENSMUST00000162994
Ensembl Acc Id: ENSMUSP00000124139   ⟸   ENSMUST00000162382
Ensembl Acc Id: ENSMUSP00000125116   ⟸   ENSMUST00000162366
Ensembl Acc Id: ENSMUSP00000123752   ⟸   ENSMUST00000162349
Ensembl Acc Id: ENSMUSP00000124350   ⟸   ENSMUST00000161716
Ensembl Acc Id: ENSMUSP00000125550   ⟸   ENSMUST00000161879
RefSeq Acc Id: XP_036020641   ⟸   XM_036164748
- Peptide Label: isoform X9
- UniProtKB: Q3U674 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_036020640   ⟸   XM_036164747
- Peptide Label: isoform X7
- UniProtKB: Q3U674 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_036020639   ⟸   XM_036164746
- Peptide Label: isoform X1
- UniProtKB: Q3U674 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_036020642   ⟸   XM_036164749
- Peptide Label: isoform X11
- UniProtKB: Q3U674 (UniProtKB/TrEMBL)
Protein Domains
PID   WW

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q9DBR4-F1-model_v2 AlphaFold Q9DBR4 1-760 view protein structure

Promoters
RGD ID:6886804
Promoter ID:EPDNEW_M6853
Type:initiation region
Name:Apbb2_2
Description:Mus musculus amyloid beta precursor protein-binding, family B,member 2 , transcript variant 3, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M6854  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38566,618,670 - 66,618,730EPDNEW
RGD ID:6886806
Promoter ID:EPDNEW_M6854
Type:initiation region
Name:Apbb2_1
Description:Mus musculus amyloid beta precursor protein-binding, family B,member 2 , transcript variant 3, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M6853  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38566,618,785 - 66,618,845EPDNEW
RGD ID:6837102
Promoter ID:MM_KWN:42429
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Brain,   MEF_B6
Transcripts:OTTMUST00000082529
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36566,704,346 - 66,705,347 (-)MPROMDB
RGD ID:6837101
Promoter ID:MM_KWN:42431
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Brain,   Kidney,   Lung
Transcripts:OTTMUST00000082404,   OTTMUST00000082527,   OTTMUST00000082528
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36566,728,616 - 66,729,116 (-)MPROMDB
RGD ID:6837099
Promoter ID:MM_KWN:42433
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Kidney
Transcripts:ENSMUST00000068206,   ENSMUST00000087256,   ENSMUST00000113715,   OTTMUST00000082480
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36566,842,581 - 66,843,081 (-)MPROMDB
RGD ID:6837097
Promoter ID:MM_KWN:42435
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Brain,   Kidney,   Lung,   MEF_B6
Transcripts:OTTMUST00000082475
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36566,938,201 - 66,938,782 (-)MPROMDB
RGD ID:6837100
Promoter ID:MM_KWN:42437
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day0,   3T3L1_Day1,   3T3L1_Day2,   3T3L1_Day3,   BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   ES_Cell,   Kidney,   Liver,   Lung,   MEF_B4,   MEF_B6,   Spleen
Transcripts:NM_009686,   NM_009686_APBB2,   OTTMUST00000082397,   OTTMUST00000082403,   OTTMUST00000082405,   OTTMUST00000082407,   OTTMUST00000082409,   OTTMUST00000082410,   OTTMUST00000082411,   OTTMUST00000082476,   OTTMUST00000082477,   UC008XPB.1,   UC008XPC.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36567,009,671 - 67,010,171 (-)MPROMDB

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:108405 AgrOrtholog
Ensembl Genes ENSMUSG00000029207 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript ENSMUST00000159512 ENTREZGENE
  ENSMUST00000159786 ENTREZGENE
  ENSMUST00000159786.8 UniProtKB/Swiss-Prot
  ENSMUST00000160870 ENTREZGENE
  ENSMUST00000162349 ENTREZGENE
  ENSMUST00000162349.8 UniProtKB/Swiss-Prot
  ENSMUST00000162366 ENTREZGENE
  ENSMUST00000162955 ENTREZGENE
Gene3D-CATH 2.20.70.10 UniProtKB/Swiss-Prot
  2.30.29.30 UniProtKB/Swiss-Prot
InterPro Fe65 UniProtKB/Swiss-Prot
  PH-like_dom_sf UniProtKB/Swiss-Prot
  PTB/PI_dom UniProtKB/Swiss-Prot
  WW_dom UniProtKB/Swiss-Prot
  WW_dom_sf UniProtKB/Swiss-Prot
KEGG Report mmu:11787 UniProtKB/Swiss-Prot
MGD MGI:108405 ENTREZGENE
NCBI Gene 11787 ENTREZGENE
PANTHER AMYLOID-BETA A4 PRECURSOR PROTEIN-BINDING FAMILY B MEMBER 2 UniProtKB/Swiss-Prot
  PTHR14058 UniProtKB/Swiss-Prot
Pfam PF00397 UniProtKB/Swiss-Prot
  PID UniProtKB/Swiss-Prot
PhenoGen Apbb2 PhenoGen
PROSITE PID UniProtKB/Swiss-Prot
  WW_DOMAIN_1 UniProtKB/Swiss-Prot
  WW_DOMAIN_2 UniProtKB/Swiss-Prot
SMART PTB UniProtKB/Swiss-Prot
  SM00456 UniProtKB/Swiss-Prot
Superfamily-SCOP PH domain-like UniProtKB/Swiss-Prot
  SSF51045 UniProtKB/Swiss-Prot
UniProt APBB2_MOUSE UniProtKB/Swiss-Prot
  E0CYB2_MOUSE UniProtKB/TrEMBL
  E0CYJ4_MOUSE UniProtKB/TrEMBL
  E0CYJ8_MOUSE UniProtKB/TrEMBL
  E0CYY8_MOUSE UniProtKB/TrEMBL
  E0CZ85_MOUSE UniProtKB/TrEMBL
  E0CZA9_MOUSE UniProtKB/TrEMBL
  E9PWH3 ENTREZGENE, UniProtKB/TrEMBL
  F6V8Y6_MOUSE UniProtKB/TrEMBL
  P70415_MOUSE UniProtKB/TrEMBL
  Q3T9N0 ENTREZGENE, UniProtKB/TrEMBL
  Q3TDW6 ENTREZGENE, UniProtKB/TrEMBL
  Q3TEP8_MOUSE UniProtKB/TrEMBL
  Q3TIZ5 ENTREZGENE, UniProtKB/TrEMBL
  Q3U674 ENTREZGENE, UniProtKB/TrEMBL
  Q6DFX8 ENTREZGENE
  Q6DQH2_MOUSE UniProtKB/TrEMBL
  Q8BSK4_MOUSE UniProtKB/TrEMBL
  Q9DBR4 ENTREZGENE
  Q9R021_MOUSE UniProtKB/TrEMBL
UniProt Secondary Q6DFX8 UniProtKB/Swiss-Prot


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2023-06-27 Apbb2  amyloid beta precursor protein binding family B member 2  Apbb2  amyloid beta (A4) precursor protein-binding, family B, member 2  Symbol and/or name change 5135510 APPROVED