Ogdh (oxoglutarate (alpha-ketoglutarate) dehydrogenase (lipoamide)) - Rat Genome Database

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Advanced Search (OLGA)
Gene: Ogdh (oxoglutarate (alpha-ketoglutarate) dehydrogenase (lipoamide)) Mus musculus
Analyze
Symbol: Ogdh
Name: oxoglutarate (alpha-ketoglutarate) dehydrogenase (lipoamide)
RGD ID: 1558013
MGI Page MGI
Description: Enables oxoglutarate dehydrogenase (NAD+) activity. Involved in brain development. Located in mitochondrion. Is expressed in several structures, including alimentary system; genitourinary system; nervous system; respiratory system; and sensory organ. Human ortholog(s) of this gene implicated in oxoglutarate dehydrogenase deficiency. Orthologous to human OGDH (oxoglutarate dehydrogenase).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: 2-oxoglutarate dehydrogenase complex component E1; 2-oxoglutarate dehydrogenase, mitochondrial; 2210403E04Rik; 2210412K19Rik; AA409584; alpha-ketoglutarate dehydrogenase; alpha-KGDH-E1; d1401; E1o; KIAA4192; mKIAA4192; OGDC-E1; OGDH-E1; oxoglutarate dehydrogenase (lipoamide); thiamine diphosphate (ThDP)-dependent 2-oxoglutarate dehydrogenase
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39116,241,597 - 6,309,094 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl116,241,633 - 6,306,642 (+)EnsemblGRCm39 Ensembl
GRCm38116,291,597 - 6,359,094 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl116,291,633 - 6,356,642 (+)EnsemblGRCm38mm10GRCm38
MGSCv37116,191,600 - 6,259,096 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36116,191,600 - 6,268,605 (+)NCBIMGSCv36mm8
Celera116,773,507 - 6,842,010 (+)NCBICelera
Cytogenetic Map11A1NCBI
cM Map113.94NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(+)-dexrazoxane  (EXP)
(-)-epigallocatechin 3-gallate  (ISO)
(R,R,R)-alpha-tocopherol  (ISO)
(S)-nicotine  (ISO)
1,1'-azobis(N,N-dimethylformamide)  (ISO)
1,2-dimethylhydrazine  (EXP)
1,4-dithiothreitol  (ISO)
17beta-estradiol  (EXP)
17beta-hydroxy-17-methylestra-4,9,11-trien-3-one  (ISO)
2,2',4,4'-Tetrabromodiphenyl ether  (ISO)
2,2,2-tetramine  (ISO)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2,4,6-tribromophenol  (ISO)
2-hydroxypropanoic acid  (ISO)
3,3',5,5'-tetrabromobisphenol A  (ISO)
3,4-methylenedioxymethamphetamine  (EXP)
3-isobutyl-1-methyl-7H-xanthine  (EXP)
4,4'-sulfonyldiphenol  (ISO)
4-hydroxyphenyl retinamide  (EXP)
5-methoxy-2-\{[(4-methoxy-3,5-dimethylpyridin-2-yl)methyl]sulfinyl\}-1H-benzimidazole  (ISO)
5-methyl-4-oxido-2-pyrazin-4-iumcarboxylic acid  (ISO)
6-propyl-2-thiouracil  (ISO)
acetamide  (ISO)
acrolein  (ISO)
acrylamide  (ISO)
all-trans-retinoic acid  (ISO)
aluminium atom  (ISO)
aluminium(0)  (ISO)
amiodarone  (ISO)
aristolochic acid A  (ISO)
arsane  (ISO)
arsenic atom  (ISO)
arsenite(3-)  (ISO)
benzatropine  (ISO)
benzbromarone  (ISO)
benzo[a]pyrene  (EXP)
benzo[a]pyrene diol epoxide I  (ISO)
bisphenol A  (EXP,ISO)
bisphenol AF  (ISO)
Bisphenol B  (ISO)
bisphenol F  (ISO)
bortezomib  (ISO)
capsaicin  (EXP)
carbon nanotube  (EXP)
celastrol  (EXP)
choline  (EXP)
chromium(6+)  (ISO)
clofibrate  (ISO)
cobalt dichloride  (ISO)
conjugated linoleic acid  (ISO)
copper atom  (ISO)
copper(0)  (ISO)
decabromodiphenyl ether  (ISO)
dexamethasone  (EXP)
diallyl trisulfide  (ISO)
dibutyl phthalate  (ISO)
dicrotophos  (ISO)
diuron  (ISO)
doxorubicin  (EXP,ISO)
epoxiconazole  (EXP)
ethanol  (EXP,ISO)
fipronil  (ISO)
flutamide  (ISO)
folic acid  (EXP,ISO)
fulvestrant  (ISO)
gentamycin  (ISO)
glutathione  (ISO)
gold atom  (ISO)
gold(0)  (ISO)
hydrogen peroxide  (ISO)
hydroquinone O-beta-D-glucopyranoside  (ISO)
indometacin  (ISO)
inulin  (EXP)
iodide salt  (ISO)
isoniazide  (EXP)
isoprenaline  (ISO)
ivermectin  (ISO)
kahweol  (ISO)
L-1,4-dithiothreitol  (ISO)
L-ascorbic acid  (ISO)
L-ethionine  (ISO)
L-methionine  (EXP)
lipopolysaccharide  (ISO)
methotrexate  (ISO)
methyl methanesulfonate  (ISO)
myrtenal  (ISO)
N(4)-hydroxycytidine  (EXP)
N(gamma)-nitro-L-arginine methyl ester  (ISO)
N-methyl-4-phenylpyridinium  (ISO)
N-nitrosodiethylamine  (ISO)
naringin  (ISO)
nickel atom  (ISO)
nickel dichloride  (ISO)
nickel sulfate  (ISO)
nicotinamide  (ISO)
nicotine  (ISO)
Nonylphenol  (ISO)
ochratoxin A  (ISO)
omeprazole  (ISO)
oxybenzone  (ISO)
paracetamol  (ISO)
perfluorooctane-1-sulfonic acid  (EXP)
perfluorooctanoic acid  (EXP,ISO)
phenobarbital  (EXP,ISO)
phlorizin  (EXP)
pirinixic acid  (EXP,ISO)
potassium chromate  (ISO)
rac-lactic acid  (ISO)
resveratrol  (EXP)
rotenone  (ISO)
S-allylcysteine  (ISO)
silicon dioxide  (ISO)
sinapic acid  (ISO)
sodium arsenite  (ISO)
Soman  (ISO)
streptozocin  (ISO)
sunitinib  (ISO)
tert-butyl hydroperoxide  (ISO)
testosterone enanthate  (ISO)
thioacetamide  (ISO)
thymol  (ISO)
thymol sulfate(1-)  (ISO)
titanium dioxide  (EXP)
tributylstannane  (EXP)
triphenyl phosphate  (ISO)
triptonide  (EXP)
troglitazone  (EXP)
tunicamycin  (EXP)
valproic acid  (ISO)
zinc atom  (ISO)
zinc(0)  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component
mitochondrial membrane  (ISS)
mitochondrion  (HDA,IBA,IDA,ISO)
nucleus  (ISO,ISS)
oxoglutarate dehydrogenase complex  (IBA,ISO,ISS)

Phenotype Annotations     Click to see Annotation Detail View
References

References - curated
# Reference Title Reference Citation
1. Inactivation of aconitase and oxoglutarate dehydrogenase in skeletal muscle in vitro by superoxide anions and/or nitric oxide. Andersson U, etal., Biochem Biophys Res Commun. 1998 Aug 19;249(2):512-6.
2. Functional annotation of a full-length mouse cDNA collection. Kawai J, etal., Nature. 2001 Feb 8;409(6821):685-90.
3. MGDs mouse GO annotations MGD data from the GO Consortium
4. Integrated analysis of protein composition, tissue diversity, and gene regulation in mouse mitochondria. Mootha VK, etal., Cell 2003 Nov 26;115(5):629-40.
5. Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73.
6. OMIM Disease Annotation Pipeline OMIM Disease Annotation Pipeline
7. KEGG Annotation Import Pipeline Pipeline to import KEGG annotations from KEGG into RGD
8. SMPDB Annotation Import Pipeline Pipeline to import SMPDB annotations from SMPDB into RGD
9. Mouse MP Annotation Import Pipeline RGD automated import pipeline
10. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
11. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
12. The alpha-ketoglutarate dehydrogenase complex. Sheu KF and Blass JP, Ann N Y Acad Sci. 1999;893:61-78.
Additional References at PubMed
PMID:1606619   PMID:8248240   PMID:8889548   PMID:10349636   PMID:10725249   PMID:11042159   PMID:11076861   PMID:12477932   PMID:12520002   PMID:12819125   PMID:12904583   PMID:14610273  
PMID:14681479   PMID:15356189   PMID:15489334   PMID:15782199   PMID:16141072   PMID:16141073   PMID:16901643   PMID:17322295   PMID:17482317   PMID:17626619   PMID:18614015   PMID:18799693  
PMID:19521500   PMID:21677750   PMID:21873635   PMID:22169199   PMID:22496890   PMID:22794259   PMID:25251478   PMID:25737280   PMID:26465331   PMID:26928132   PMID:27215380   PMID:27582470  
PMID:28130547   PMID:28188211   PMID:28242228   PMID:28245920   PMID:28378742   PMID:29199018   PMID:29222160   PMID:30333137   PMID:30335684   PMID:30457570   PMID:30550785   PMID:30562941  
PMID:30890077   PMID:30973865   PMID:30995482   PMID:31682939   PMID:31693883   PMID:32325033   PMID:32748289   PMID:33601422   PMID:33795871   PMID:35012549   PMID:35237793   PMID:36114006  
PMID:36293380   PMID:36417873   PMID:37142655   PMID:38355793   PMID:38418556  


Genomics

Comparative Map Data
Ogdh
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39116,241,597 - 6,309,094 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl116,241,633 - 6,306,642 (+)EnsemblGRCm39 Ensembl
GRCm38116,291,597 - 6,359,094 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl116,291,633 - 6,356,642 (+)EnsemblGRCm38mm10GRCm38
MGSCv37116,191,600 - 6,259,096 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36116,191,600 - 6,268,605 (+)NCBIMGSCv36mm8
Celera116,773,507 - 6,842,010 (+)NCBICelera
Cytogenetic Map11A1NCBI
cM Map113.94NCBI
OGDH
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38744,606,627 - 44,709,066 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl744,606,572 - 44,709,066 (+)EnsemblGRCh38hg38GRCh38
GRCh37744,646,226 - 44,748,665 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36744,612,696 - 44,715,194 (+)NCBINCBI36Build 36hg18NCBI36
Build 34744,419,410 - 44,521,908NCBI
Celera744,744,966 - 44,847,513 (+)NCBICelera
Cytogenetic Map7p13NCBI
HuRef744,530,268 - 44,633,659 (+)NCBIHuRef
CHM1_1744,650,491 - 44,752,987 (+)NCBICHM1_1
T2T-CHM13v2.0744,766,778 - 44,869,231 (+)NCBIT2T-CHM13v2.0
CRA_TCAGchr7v2744,685,639 - 44,788,190 (+)NCBI
Ogdh
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81485,363,949 - 85,431,405 (+)NCBIGRCr8
mRatBN7.21481,150,021 - 81,217,479 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1481,150,091 - 81,217,479 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1485,551,494 - 85,617,817 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01486,791,580 - 86,857,903 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01483,240,905 - 83,307,226 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01486,414,924 - 86,481,903 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1486,414,949 - 86,613,327 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01487,376,110 - 87,442,862 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41487,022,994 - 87,090,768 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera1480,033,036 - 80,099,636 (+)NCBICelera
Cytogenetic Map14q21NCBI
Ogdh
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554567,415,589 - 7,485,515 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554567,416,343 - 7,484,889 (-)NCBIChiLan1.0ChiLan1.0
OGDH
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2649,519,160 - 49,621,977 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1797,843,898 - 97,946,715 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0745,321,559 - 45,422,515 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1745,390,679 - 45,492,000 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl745,409,148 - 45,491,636 (+)Ensemblpanpan1.1panPan2
OGDH
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Dog10K_Boxer_Tasha162,363,764 - 2,432,958 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01614,428,589 - 14,497,803 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1614,428,589 - 14,497,757 (-)EnsemblROS_Cfam_1.0 Ensembl
UNSW_CanFamBas_1.01614,059,830 - 14,129,291 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01614,040,718 - 14,109,906 (-)NCBIUU_Cfam_GSD_1.0
Ogdh
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405118100,295,062 - 100,372,678 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493647819,506,154 - 19,583,364 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_00493647819,506,845 - 19,584,411 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
OGDH
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1850,609,418 - 50,684,964 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11850,609,415 - 50,684,990 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21855,497,953 - 55,588,004 (-)NCBISscrofa10.2Sscrofa10.2susScr3
OGDH
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12113,975,825 - 14,070,216 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2113,973,845 - 14,070,731 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_0236660628,465,981 - 8,560,428 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Ogdh
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247407,482,314 - 7,549,417 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247407,481,719 - 7,549,809 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Ogdh
1857 total Variants
miRNA Target Status (No longer updated)

Predicted Target Of
Summary Value
Count of predictions:2250
Count of miRNA genes:548
Interacting mature miRNAs:663
Transcripts:ENSMUST00000003461, ENSMUST00000081894, ENSMUST00000093350, ENSMUST00000101554, ENSMUST00000125929, ENSMUST00000135124, ENSMUST00000140765
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1300599Cocrb11_mcocaine related behavior 11 (mouse)Not determined11267035536671472Mouse
26884446Sklq10_mskull length QTL 10, 10 week (mouse)11325000062890826Mouse
1300661Lmr6_mleishmaniasis resistance 6 (mouse)Not determined11125976374Mouse
13208559Wght10_mweight 10 (mouse)11395000088890826Mouse
13208558Lgth12_mbody length 12 (mouse)11395000094890826Mouse
27095925Pglq5_mpelvic girdle length QTL 5, 5 week (mouse)11325000019750000Mouse
27226741Metcl5_mmetatarsal-calcaneal length 5, 5 week (mouse)11465000046290827Mouse
1357722Vtbt11_mvertebral trabecular bone trait 11 (mouse)Not determined11123880487Mouse
27226735Metcl16_mmetatarsal-calcaneal length 16, 16 week (mouse)11525000035090827Mouse
10044008Hbnr15_mHeligmosomoides bakeri nematode resistance 15 (mouse)Not determined1122705234227232Mouse
27226798Scvln18_msacral vertebrae length 2, 16 week (mouse)11325000060690826Mouse
27095919Pglq10_mpelvic girdle length QTL 10, 10 week (mouse)11325000018450000Mouse
1300768Tshp9_mtooth shape 9 (mouse)Not determined11125976374Mouse
10053676Eae44a_mexperimental allergic encephalomyelitis susceptibility 44a (mouse)Not determined11450789621379532Mouse
1301765Skull15_mskull morphology 15 (mouse)Not determined11125976374Mouse
27095914Pglq16_mpelvic girdle length QTL 16, 16 week (mouse)11325000018150000Mouse
27095909Scvln6_msacral vertebrae length 2, 5 week (mouse)11325000044090827Mouse
27095904Scvln12_msacral vertebrae length 2, 10 week (mouse)11325000034495048Mouse
26884453Sklq16_mskull length QTL 16, 16 week (mouse)11325000072690826Mouse

Markers in Region
D9Mit34.1  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map7F1UniSTS
Cytogenetic Map13D1UniSTS
Cytogenetic Map1C3UniSTS
Cytogenetic Map2C1.3UniSTS
Cytogenetic Map19D1UniSTS
Cytogenetic Map9F1UniSTS
Cytogenetic Map1FUniSTS
Cytogenetic Map7D3UniSTS
Cytogenetic Map11E2UniSTS
Cytogenetic Map3F2UniSTS
Cytogenetic Map14C3UniSTS
Cytogenetic Map9A3UniSTS
Cytogenetic Map2H2UniSTS
Cytogenetic Map11E1UniSTS
Cytogenetic Map2H4UniSTS
Cytogenetic Map8B3.3UniSTS
Cytogenetic Map4D1UniSTS
Cytogenetic Map4E2UniSTS
Cytogenetic Map2E5UniSTS
Cytogenetic Map11B4UniSTS
Cytogenetic Map5G3UniSTS
Cytogenetic MapXA5UniSTS
Cytogenetic Map10C1UniSTS
Cytogenetic Map12A1.1UniSTS
Cytogenetic Map6F2UniSTS
Cytogenetic Map1C1.3UniSTS
Cytogenetic Map16B1UniSTS
Cytogenetic Map12C1UniSTS
Cytogenetic Map7E2UniSTS
Cytogenetic Map9F2UniSTS
Cytogenetic Map5FUniSTS
Cytogenetic Map2H1UniSTS
Cytogenetic Map2E2UniSTS
Cytogenetic Map15F1UniSTS
Cytogenetic Map15E1UniSTS
Cytogenetic Map3G2UniSTS
Cytogenetic Map6F3UniSTS
Cytogenetic Map13B3UniSTS
Cytogenetic Map12F1UniSTS
Cytogenetic Map1E4UniSTS
Cytogenetic Map1E3UniSTS
Cytogenetic Map5E1UniSTS
Cytogenetic Map7F3UniSTS
Cytogenetic Map16B3UniSTS
Cytogenetic Map14D2UniSTS
Cytogenetic Map19C2UniSTS
Cytogenetic Map19D3UniSTS
Cytogenetic Map1H5UniSTS
Cytogenetic Map1DUniSTS
Cytogenetic Map14BUniSTS
Cytogenetic Map11CUniSTS
Cytogenetic Map10B4UniSTS
Cytogenetic Map6G3UniSTS
Cytogenetic Map7A1UniSTS
Cytogenetic Map7A3UniSTS
Cytogenetic Map8E1UniSTS
Cytogenetic Map8A2UniSTS
Cytogenetic Map4D3UniSTS
Cytogenetic Map2BUniSTS
Cytogenetic Map5A3UniSTS
Cytogenetic Map9DUniSTS
Cytogenetic Map5C1UniSTS
Cytogenetic Map19C3UniSTS
Cytogenetic Map13A2-A3UniSTS
Cytogenetic Map4C6UniSTS
Cytogenetic Map17DUniSTS
Cytogenetic Map17B1UniSTS
Cytogenetic Map17A3.3UniSTS
Cytogenetic Map13A1UniSTS
Cytogenetic Map3F2.1UniSTS
Cytogenetic Map15D3UniSTS
Cytogenetic Map8D2UniSTS
Cytogenetic Map12A3UniSTS
Cytogenetic Map1H2.1UniSTS
Cytogenetic Map7F5UniSTS
Cytogenetic Map7CUniSTS
Cytogenetic Map2E1UniSTS
Cytogenetic Map11B2UniSTS
Cytogenetic Map16A3UniSTS
Cytogenetic Map5C3.3UniSTS
Cytogenetic Map16A1UniSTS
Cytogenetic Map5G1UniSTS
Cytogenetic Map6A2UniSTS
Cytogenetic Map7B1UniSTS
Cytogenetic Map3F2.2UniSTS
Cytogenetic Map5C3.1UniSTS
Cytogenetic Map2C3UniSTS
Cytogenetic Map17A3.2-A3.3UniSTS
Cytogenetic Map6E3UniSTS
Cytogenetic Map11B1.1UniSTS
Cytogenetic Map1H6UniSTS
Cytogenetic Map2C2UniSTS
Cytogenetic Map19CUniSTS
Cytogenetic Map17E1.3UniSTS
Cytogenetic Map5A1UniSTS
Cytogenetic Map11B5UniSTS
Cytogenetic Map9A5.2UniSTS
Cytogenetic Map1A1UniSTS
Cytogenetic Map13A5UniSTS
Cytogenetic MapXA1.1UniSTS
Cytogenetic Map4D2.3UniSTS
Cytogenetic Map4B3UniSTS
Cytogenetic Map3A3UniSTS
Cytogenetic Map2A3UniSTS
Cytogenetic Map8CUniSTS
Cytogenetic Map12EUniSTS
Cytogenetic Map10C2UniSTS
Cytogenetic Map5G2UniSTS
Cytogenetic Map5B1UniSTS
Cytogenetic Map3F1UniSTS
Cytogenetic Map2H3UniSTS
Cytogenetic Map2A1UniSTS
Cytogenetic Map1H1UniSTS
Cytogenetic Map15F3UniSTS
Cytogenetic Map9E1UniSTS
Cytogenetic Map9CUniSTS
Cytogenetic Map1A2UniSTS
Cytogenetic Map12C3UniSTS
Cytogenetic Map19AUniSTS
Cytogenetic Map5B2UniSTS
Cytogenetic Map3DUniSTS
Cytogenetic Map11B1.3UniSTS
Cytogenetic Map6B1UniSTS
Cytogenetic MapXC-DUniSTS
Cytogenetic Map5G1.3UniSTS
Cytogenetic Map7D1-E2UniSTS
Cytogenetic Map11A1UniSTS
Cytogenetic Map13B1UniSTS
Cytogenetic Map1H2.2UniSTS
Cytogenetic Map8C3UniSTS
Cytogenetic Map11DUniSTS
Cytogenetic MapXA7.3UniSTS
Cytogenetic Map16C1.1UniSTS
Cytogenetic Map15F2UniSTS
Cytogenetic Map9A2UniSTS
Cytogenetic Map1H4-H6UniSTS
Cytogenetic Map12D2UniSTS
Cytogenetic Map1G3UniSTS
Cytogenetic Map5E5UniSTS
Cytogenetic Map1H3UniSTS
Cytogenetic Map19BUniSTS
cM Map950.0UniSTS
Whitehead Genetic943.7UniSTS
RH124874  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38116,356,475 - 6,356,559UniSTSGRCm38
MGSCv37116,256,478 - 6,256,562UniSTSGRCm37
Celera116,839,392 - 6,839,476UniSTS
Cytogenetic Map11A1UniSTS
Ogdh  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map11A1UniSTS
cM Map11 UniSTS
D10Mit157.2  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map6D1UniSTS
Cytogenetic Map16B4UniSTS
Cytogenetic Map18E2UniSTS
Cytogenetic Map4C3UniSTS
Cytogenetic Map7B2UniSTS
Cytogenetic Map4D2.3UniSTS
Cytogenetic Map11E1UniSTS
Cytogenetic Map14E2.2UniSTS
Cytogenetic Map4C7UniSTS
Cytogenetic Map2H4UniSTS
Cytogenetic Map1FUniSTS
Cytogenetic Map6C3UniSTS
Cytogenetic Map11DUniSTS
Cytogenetic Map3G2UniSTS
Cytogenetic Map17A1UniSTS
Cytogenetic Map9F2UniSTS
Cytogenetic Map12F1UniSTS
Cytogenetic Map19C2UniSTS
Cytogenetic Map3BUniSTS
Cytogenetic Map8C1UniSTS
Cytogenetic Map18A2UniSTS
Cytogenetic Map3F2UniSTS
Cytogenetic Map14C3UniSTS
Cytogenetic Map8E1UniSTS
Cytogenetic Map8E2UniSTS
Cytogenetic Map5B1UniSTS
Cytogenetic Map18B1UniSTS
Cytogenetic Map9CUniSTS
Cytogenetic Map14C2UniSTS
Cytogenetic Map6A1UniSTS
Cytogenetic Map10B4UniSTS
Cytogenetic Map13D2.1UniSTS
Cytogenetic Map5E5UniSTS
Cytogenetic Map11B1.3UniSTS
Cytogenetic Map4D1UniSTS
Cytogenetic Map9A5.2UniSTS
Cytogenetic Map3F1UniSTS
Cytogenetic Map17E3UniSTS
Cytogenetic Map11B3UniSTS
Cytogenetic Map1H4UniSTS
Cytogenetic Map6A3UniSTS
Cytogenetic Map5E4-E5UniSTS
Cytogenetic Map15E1UniSTS
Cytogenetic Map13DUniSTS
Cytogenetic Map14BUniSTS
Cytogenetic Map14D1UniSTS
Cytogenetic Map7B4UniSTS
Cytogenetic Map8D3UniSTS
Cytogenetic MapXDUniSTS
Cytogenetic Map17A3.3UniSTS
Cytogenetic Map7E2UniSTS
Cytogenetic Map1H2.3UniSTS
Cytogenetic Map7A2UniSTS
Cytogenetic Map7F3UniSTS
Cytogenetic Map9F1UniSTS
Cytogenetic Map10C1UniSTS
Cytogenetic Map4E2UniSTS
Cytogenetic Map16A1UniSTS
Cytogenetic Map8B3.3UniSTS
Cytogenetic Map8D2UniSTS
Cytogenetic Map3DUniSTS
Cytogenetic Map15D2UniSTS
Cytogenetic Map17B1UniSTS
Cytogenetic Map7A3UniSTS
Cytogenetic Map15F1UniSTS
Cytogenetic Map16B2UniSTS
Cytogenetic Map7CUniSTS
Cytogenetic Map3F2.1UniSTS
Cytogenetic Map6F3UniSTS
Cytogenetic Map1C4UniSTS
Cytogenetic Map11E2UniSTS
Cytogenetic Map11B5UniSTS
Cytogenetic Map9F3UniSTS
Cytogenetic Map2BUniSTS
Cytogenetic Map13B3UniSTS
Cytogenetic Map9A4UniSTS
Cytogenetic Map5A3UniSTS
Cytogenetic Map2H1UniSTS
Cytogenetic Map16B1UniSTS
Cytogenetic Map1A5UniSTS
Cytogenetic Map11CUniSTS
Cytogenetic Map9E1UniSTS
Cytogenetic Map6G1UniSTS
Cytogenetic MapXA2UniSTS
Cytogenetic Map13B1UniSTS
Cytogenetic Map5E2UniSTS
Cytogenetic Map12C1UniSTS
Cytogenetic Map5FUniSTS
Cytogenetic Map4D3UniSTS
Cytogenetic Map10C2UniSTS
Cytogenetic Map9BUniSTS
Cytogenetic Map5G2UniSTS
Cytogenetic Map7F1UniSTS
Cytogenetic Map12C3UniSTS
Cytogenetic Map10A4UniSTS
Cytogenetic Map8A2UniSTS
Cytogenetic Map18A1UniSTS
Cytogenetic Map12A1.1UniSTS
Cytogenetic Map1C2UniSTS
Cytogenetic Map11B2UniSTS
Cytogenetic Map6E3UniSTS
Cytogenetic Map5C3.3UniSTS
Cytogenetic Map1BUniSTS
Cytogenetic Map17A3.1UniSTS
Cytogenetic Map7A1UniSTS
Cytogenetic Map2E5UniSTS
Cytogenetic Map11A1UniSTS
Cytogenetic Map4B1UniSTS
Cytogenetic Map15A2UniSTS
Cytogenetic Map8C3UniSTS
Cytogenetic Map2A3UniSTS
Cytogenetic Map5G3UniSTS
Cytogenetic Map4A3UniSTS
Cytogenetic Map2H3UniSTS
Cytogenetic Map8A1UniSTS
Cytogenetic Map8A1.1UniSTS
Cytogenetic Map16A3UniSTS
Cytogenetic Map10B1UniSTS
Cytogenetic Map19AUniSTS
Cytogenetic Map10A1UniSTS
Cytogenetic Map13D1UniSTS
Cytogenetic Map4A1UniSTS
Cytogenetic Map9A3UniSTS
Cytogenetic Map17CUniSTS
Cytogenetic Map1DUniSTS
Cytogenetic Map5E3UniSTS
Cytogenetic Map15D3UniSTS
Cytogenetic Map2H2UniSTS
Cytogenetic Map7D3UniSTS
Cytogenetic Map2A1UniSTS
Cytogenetic Map14C1UniSTS
Cytogenetic Map14E5UniSTS
Cytogenetic Map10CUniSTS
Cytogenetic Map18B2UniSTS
Cytogenetic Map2F1UniSTS
Cytogenetic Map10D3UniSTS
Cytogenetic Map17A2UniSTS
Cytogenetic Map2C3UniSTS
Cytogenetic Map1C3UniSTS
Cytogenetic Map17B2UniSTS
Cytogenetic Map5B2UniSTS
Cytogenetic Map5G1UniSTS
Cytogenetic Map4C6UniSTS
Cytogenetic Map13C3UniSTS
Cytogenetic Map2E1UniSTS
Cytogenetic Map17A3.2-A3.3UniSTS
Cytogenetic Map19C3UniSTS
Cytogenetic Map7E3UniSTS
Cytogenetic Map13C1UniSTS
Cytogenetic Map9E3.1UniSTS
Cytogenetic Map15E3UniSTS
Cytogenetic Map6B1UniSTS
Cytogenetic MapXE3UniSTS
Cytogenetic Map4C4UniSTS
Cytogenetic Map3E3UniSTS
Cytogenetic Map11A4UniSTS
Cytogenetic Map4C5UniSTS
Cytogenetic Map18B3UniSTS
Cytogenetic Map9A2UniSTS
Cytogenetic Map7E1UniSTS
Cytogenetic Map5D-E1UniSTS
Cytogenetic Map5B3UniSTS
Cytogenetic Map13A2-A3UniSTS
Cytogenetic Map5A2UniSTS
Cytogenetic Map4B3UniSTS
Cytogenetic Map1E4UniSTS
Cytogenetic Map17E4UniSTS
Cytogenetic Map1G2UniSTS
Cytogenetic Map15B3.1UniSTS
Cytogenetic Map12EUniSTS
Cytogenetic MapXA5UniSTS
Cytogenetic Map6A3.3UniSTS
Cytogenetic Map6G3UniSTS
Cytogenetic Map6F2UniSTS
Cytogenetic Map5C1UniSTS
Cytogenetic Map4D2.1UniSTS
Cytogenetic Map4A5UniSTS
Cytogenetic Map3F2.2UniSTS
Cytogenetic Map1E3-E4UniSTS
Cytogenetic Map9F1-F3UniSTS
Cytogenetic Map1C1.1UniSTS
Cytogenetic Map14D2UniSTS
Cytogenetic Map12A2UniSTS
Cytogenetic Map17A3-BUniSTS
Cytogenetic Map7F5UniSTS
Cytogenetic Map14A3UniSTS
Cytogenetic Map5G1.1UniSTS
Cytogenetic MapXF2-F4UniSTS
Cytogenetic Map7D2UniSTS
Cytogenetic Map2F3UniSTS
Cytogenetic Map10A3UniSTS
Cytogenetic MapXA7.3UniSTS
Cytogenetic Map9F1-F2UniSTS
Cytogenetic Map13A3.2UniSTS
Cytogenetic Map10A2UniSTS
Cytogenetic Map1C1UniSTS
Cytogenetic Map1A1UniSTS
Cytogenetic Map12D3UniSTS
Cytogenetic Map1A3-A5UniSTS
Cytogenetic Map2A2UniSTS
Cytogenetic Map3A1UniSTS
Cytogenetic MapXA3.3UniSTS
Cytogenetic Map16A-B1UniSTS
Cytogenetic Map1D2.3UniSTS
Cytogenetic Map6B2.3UniSTS
Cytogenetic Map2G3UniSTS
Cytogenetic MapXA2-A3.1UniSTS
Cytogenetic Map9A5.3UniSTS
Cytogenetic Map14A2-BUniSTS
Cytogenetic Map8E1-E2UniSTS
Cytogenetic Map8A3UniSTS
Cytogenetic Map1G3-H1UniSTS
Cytogenetic Map8B3-C1UniSTS
Cytogenetic Map19C1UniSTS
Cytogenetic Map8C5UniSTS
Cytogenetic Map8A4UniSTS
Cytogenetic Map15F3UniSTS
Cytogenetic Map14E4UniSTS
Cytogenetic Map4D2.2UniSTS
Cytogenetic MapXF5UniSTS
cM Map1040.0UniSTS
Whitehead Genetic1033.9UniSTS
AFMB031WC9  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38116,342,038 - 6,342,307UniSTSGRCm38
MGSCv37116,242,041 - 6,242,310UniSTSGRCm37
Celera116,825,010 - 6,825,279UniSTS
Cytogenetic Map11A1UniSTS


Expression

RNA-SEQ Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001252282 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001252283 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001252287 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001252288 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001361902 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001361903 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001361904 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001361905 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_010956 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006514582 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006514584 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030245648 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030245649 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030245650 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030245651 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030245652 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036156413 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AK008811 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK075848 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK088779 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK147289 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK150009 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK155856 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK169286 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK180402 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK180571 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK181416 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK183886 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK188421 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK189839 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK189909 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK190396 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK190496 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK190973 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK191182 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK191865 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK193320 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK194115 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK195097 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK195375 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK195603 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK196688 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK199209 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK199903 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK201619 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK201981 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK202141 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK202346 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK203647 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK204071 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK204207 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK204256 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK204960 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK213993 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK216535 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK217150 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK219443 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK220536 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL607152 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BB842096 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC012042 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC013670 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC025040 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC029143 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC031165 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC049104 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC057354 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC061232 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BY125742 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BY768178 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BY782774 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BY785860 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466574 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CJ145669 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CK620645 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  U02971 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSMUST00000003461   ⟹   ENSMUSP00000003461
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl116,241,633 - 6,306,642 (+)Ensembl
GRCm38.p6 Ensembl116,291,633 - 6,356,642 (+)Ensembl
Ensembl Acc Id: ENSMUST00000081894   ⟹   ENSMUSP00000080569
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl116,242,605 - 6,306,592 (+)Ensembl
GRCm38.p6 Ensembl116,292,605 - 6,356,592 (+)Ensembl
Ensembl Acc Id: ENSMUST00000093350   ⟹   ENSMUSP00000091041
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl116,241,668 - 6,306,592 (+)Ensembl
GRCm38.p6 Ensembl116,291,668 - 6,356,592 (+)Ensembl
Ensembl Acc Id: ENSMUST00000101554   ⟹   ENSMUSP00000099090
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl116,241,666 - 6,306,578 (+)Ensembl
GRCm38.p6 Ensembl116,291,666 - 6,356,578 (+)Ensembl
Ensembl Acc Id: ENSMUST00000125929
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl116,241,641 - 6,247,677 (+)Ensembl
GRCm38.p6 Ensembl116,291,641 - 6,297,677 (+)Ensembl
Ensembl Acc Id: ENSMUST00000135124   ⟹   ENSMUSP00000117505
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl116,242,172 - 6,263,818 (+)Ensembl
GRCm38.p6 Ensembl116,292,172 - 6,313,818 (+)Ensembl
Ensembl Acc Id: ENSMUST00000140765   ⟹   ENSMUSP00000117323
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl116,241,985 - 6,263,934 (+)Ensembl
GRCm38.p6 Ensembl116,291,985 - 6,313,934 (+)Ensembl
RefSeq Acc Id: NM_001252282   ⟹   NP_001239211
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39116,241,597 - 6,309,094 (+)NCBI
GRCm38116,291,597 - 6,359,094 (+)NCBI
Celera116,773,507 - 6,842,011 (+)ENTREZGENE
cM Map11 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_001252283   ⟹   NP_001239212
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39116,241,597 - 6,309,094 (+)NCBI
GRCm38116,291,597 - 6,359,094 (+)NCBI
Celera116,773,507 - 6,842,011 (+)ENTREZGENE
cM Map11 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_001252287   ⟹   NP_001239216
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39116,241,659 - 6,309,094 (+)NCBI
GRCm38116,291,659 - 6,359,094 (+)NCBI
Celera116,773,507 - 6,842,011 (+)ENTREZGENE
cM Map11 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_001252288   ⟹   NP_001239217
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39116,242,558 - 6,309,094 (+)NCBI
GRCm38116,292,558 - 6,359,094 (+)NCBI
Celera116,773,507 - 6,842,011 (+)ENTREZGENE
cM Map11 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_001361902   ⟹   NP_001348831
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39116,242,579 - 6,309,094 (+)NCBI
GRCm38116,292,579 - 6,359,094 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001361903   ⟹   NP_001348832
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39116,241,659 - 6,309,094 (+)NCBI
GRCm38116,291,659 - 6,359,094 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001361904   ⟹   NP_001348833
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39116,242,170 - 6,309,094 (+)NCBI
GRCm38116,292,170 - 6,359,094 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001361905   ⟹   NP_001348834
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39116,241,606 - 6,309,094 (+)NCBI
GRCm38116,291,606 - 6,359,094 (+)NCBI
Sequence:
RefSeq Acc Id: NM_010956   ⟹   NP_035086
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39116,241,597 - 6,309,094 (+)NCBI
GRCm38116,291,597 - 6,359,094 (+)NCBI
MGSCv37116,191,600 - 6,259,096 (+)RGD
Celera116,773,507 - 6,842,011 (+)ENTREZGENE
cM Map11 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_006514582   ⟹   XP_006514645
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39116,241,951 - 6,306,642 (+)NCBI
GRCm38116,291,951 - 6,356,642 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006514584   ⟹   XP_006514647
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39116,242,125 - 6,306,642 (+)NCBI
GRCm38116,292,125 - 6,356,642 (+)NCBI
Sequence:
RefSeq Acc Id: XM_030245648   ⟹   XP_030101508
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39116,242,563 - 6,306,642 (+)NCBI
GRCm38116,292,563 - 6,356,642 (+)NCBI
Sequence:
RefSeq Acc Id: XM_030245649   ⟹   XP_030101509
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39116,241,981 - 6,306,642 (+)NCBI
GRCm38116,292,143 - 6,356,642 (+)NCBI
Sequence:
RefSeq Acc Id: XM_030245650   ⟹   XP_030101510
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39116,241,966 - 6,306,642 (+)NCBI
GRCm38116,291,966 - 6,356,642 (+)NCBI
Sequence:
RefSeq Acc Id: XM_030245651   ⟹   XP_030101511
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39116,241,637 - 6,306,642 (+)NCBI
GRCm38116,291,637 - 6,356,642 (+)NCBI
Sequence:
RefSeq Acc Id: XM_030245652   ⟹   XP_030101512
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39116,242,148 - 6,306,642 (+)NCBI
GRCm38116,292,148 - 6,356,642 (+)NCBI
Sequence:
RefSeq Acc Id: XM_036156413   ⟹   XP_036012306
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39116,241,661 - 6,306,642 (+)NCBI
Sequence:
Protein Sequences
Protein RefSeqs NP_001239211 (Get FASTA)   NCBI Sequence Viewer  
  NP_001239212 (Get FASTA)   NCBI Sequence Viewer  
  NP_001239216 (Get FASTA)   NCBI Sequence Viewer  
  NP_001239217 (Get FASTA)   NCBI Sequence Viewer  
  NP_001348831 (Get FASTA)   NCBI Sequence Viewer  
  NP_001348832 (Get FASTA)   NCBI Sequence Viewer  
  NP_001348833 (Get FASTA)   NCBI Sequence Viewer  
  NP_001348834 (Get FASTA)   NCBI Sequence Viewer  
  NP_035086 (Get FASTA)   NCBI Sequence Viewer  
  XP_006514645 (Get FASTA)   NCBI Sequence Viewer  
  XP_006514647 (Get FASTA)   NCBI Sequence Viewer  
  XP_030101508 (Get FASTA)   NCBI Sequence Viewer  
  XP_030101509 (Get FASTA)   NCBI Sequence Viewer  
  XP_030101510 (Get FASTA)   NCBI Sequence Viewer  
  XP_030101511 (Get FASTA)   NCBI Sequence Viewer  
  XP_030101512 (Get FASTA)   NCBI Sequence Viewer  
  XP_036012306 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAC52130 (Get FASTA)   NCBI Sequence Viewer  
  AAH13670 (Get FASTA)   NCBI Sequence Viewer  
  AAH25040 (Get FASTA)   NCBI Sequence Viewer  
  AAH29143 (Get FASTA)   NCBI Sequence Viewer  
  AAH31165 (Get FASTA)   NCBI Sequence Viewer  
  AAH49104 (Get FASTA)   NCBI Sequence Viewer  
  AAH57354 (Get FASTA)   NCBI Sequence Viewer  
  AAH61232 (Get FASTA)   NCBI Sequence Viewer  
  BAD90530 (Get FASTA)   NCBI Sequence Viewer  
  BAE27824 (Get FASTA)   NCBI Sequence Viewer  
  BAE29234 (Get FASTA)   NCBI Sequence Viewer  
  BAE41044 (Get FASTA)   NCBI Sequence Viewer  
  EDL40581 (Get FASTA)   NCBI Sequence Viewer  
  EDL40582 (Get FASTA)   NCBI Sequence Viewer  
  EDL40583 (Get FASTA)   NCBI Sequence Viewer  
  EDL40584 (Get FASTA)   NCBI Sequence Viewer  
  EDL40585 (Get FASTA)   NCBI Sequence Viewer  
  EDL40586 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSMUSP00000003461
  ENSMUSP00000003461.9
  ENSMUSP00000080569
  ENSMUSP00000080569.5
  ENSMUSP00000091041
  ENSMUSP00000091041.4
  ENSMUSP00000099090
  ENSMUSP00000099090.3
  ENSMUSP00000117323.2
  ENSMUSP00000117505.2
GenBank Protein Q60597 (Get FASTA)   NCBI Sequence Viewer  
RefSeq Acc Id: NP_035086   ⟸   NM_010956
- Peptide Label: isoform 3 precursor
- UniProtKB: Q8R3M2 (UniProtKB/Swiss-Prot),   Q8K2Z3 (UniProtKB/Swiss-Prot),   Q8K0K7 (UniProtKB/Swiss-Prot),   Q80Y57 (UniProtKB/Swiss-Prot),   Q6PFZ2 (UniProtKB/Swiss-Prot),   Q5SVX9 (UniProtKB/Swiss-Prot),   Q5SVX7 (UniProtKB/Swiss-Prot),   Q5DTI4 (UniProtKB/Swiss-Prot),   Q3UDM7 (UniProtKB/Swiss-Prot),   Q91WP2 (UniProtKB/Swiss-Prot),   Q60597 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001239216   ⟸   NM_001252287
- Peptide Label: isoform 3 precursor
- UniProtKB: Q8R3M2 (UniProtKB/Swiss-Prot),   Q8K2Z3 (UniProtKB/Swiss-Prot),   Q8K0K7 (UniProtKB/Swiss-Prot),   Q80Y57 (UniProtKB/Swiss-Prot),   Q6PFZ2 (UniProtKB/Swiss-Prot),   Q5SVX9 (UniProtKB/Swiss-Prot),   Q5SVX7 (UniProtKB/Swiss-Prot),   Q5DTI4 (UniProtKB/Swiss-Prot),   Q3UDM7 (UniProtKB/Swiss-Prot),   Q91WP2 (UniProtKB/Swiss-Prot),   Q60597 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001239212   ⟸   NM_001252283
- Peptide Label: isoform 2
- UniProtKB: Q60597 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001239211   ⟸   NM_001252282
- Peptide Label: isoform 1
- UniProtKB: Q60597 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001239217   ⟸   NM_001252288
- Peptide Label: isoform 4
- UniProtKB: Z4YJV4 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006514645   ⟸   XM_006514582
- Peptide Label: isoform X1
- UniProtKB: Q60597 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_006514647   ⟸   XM_006514584
- Peptide Label: isoform X1
- UniProtKB: Q60597 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001348834   ⟸   NM_001361905
- Peptide Label: isoform 4
- UniProtKB: Z4YJV4 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_030101511   ⟸   XM_030245651
- Peptide Label: isoform X3
- UniProtKB: Z4YJV4 (UniProtKB/TrEMBL)
RefSeq Acc Id: NP_001348832   ⟸   NM_001361903
- Peptide Label: isoform 2
RefSeq Acc Id: XP_030101510   ⟸   XM_030245650
- Peptide Label: isoform X3
- UniProtKB: Z4YJV4 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_030101509   ⟸   XM_030245649
- Peptide Label: isoform X2
- UniProtKB: Q8R3M2 (UniProtKB/Swiss-Prot),   Q8K2Z3 (UniProtKB/Swiss-Prot),   Q8K0K7 (UniProtKB/Swiss-Prot),   Q80Y57 (UniProtKB/Swiss-Prot),   Q6PFZ2 (UniProtKB/Swiss-Prot),   Q60597 (UniProtKB/Swiss-Prot),   Q5SVX9 (UniProtKB/Swiss-Prot),   Q5SVX7 (UniProtKB/Swiss-Prot),   Q5DTI4 (UniProtKB/Swiss-Prot),   Q3UDM7 (UniProtKB/Swiss-Prot),   Q91WP2 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: XP_030101512   ⟸   XM_030245652
- Peptide Label: isoform X3
- UniProtKB: Z4YJV4 (UniProtKB/TrEMBL)
RefSeq Acc Id: NP_001348833   ⟸   NM_001361904
- Peptide Label: isoform 3 precursor
- UniProtKB: Q8R3M2 (UniProtKB/Swiss-Prot),   Q8K2Z3 (UniProtKB/Swiss-Prot),   Q8K0K7 (UniProtKB/Swiss-Prot),   Q80Y57 (UniProtKB/Swiss-Prot),   Q6PFZ2 (UniProtKB/Swiss-Prot),   Q60597 (UniProtKB/Swiss-Prot),   Q5SVX9 (UniProtKB/Swiss-Prot),   Q5SVX7 (UniProtKB/Swiss-Prot),   Q5DTI4 (UniProtKB/Swiss-Prot),   Q3UDM7 (UniProtKB/Swiss-Prot),   Q91WP2 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: XP_030101508   ⟸   XM_030245648
- Peptide Label: isoform X2
- UniProtKB: Q8R3M2 (UniProtKB/Swiss-Prot),   Q8K2Z3 (UniProtKB/Swiss-Prot),   Q8K0K7 (UniProtKB/Swiss-Prot),   Q80Y57 (UniProtKB/Swiss-Prot),   Q6PFZ2 (UniProtKB/Swiss-Prot),   Q60597 (UniProtKB/Swiss-Prot),   Q5SVX9 (UniProtKB/Swiss-Prot),   Q5SVX7 (UniProtKB/Swiss-Prot),   Q5DTI4 (UniProtKB/Swiss-Prot),   Q3UDM7 (UniProtKB/Swiss-Prot),   Q91WP2 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: NP_001348831   ⟸   NM_001361902
- Peptide Label: isoform 2
Ensembl Acc Id: ENSMUSP00000091041   ⟸   ENSMUST00000093350
Ensembl Acc Id: ENSMUSP00000117505   ⟸   ENSMUST00000135124
Ensembl Acc Id: ENSMUSP00000003461   ⟸   ENSMUST00000003461
Ensembl Acc Id: ENSMUSP00000117323   ⟸   ENSMUST00000140765
Ensembl Acc Id: ENSMUSP00000099090   ⟸   ENSMUST00000101554
Ensembl Acc Id: ENSMUSP00000080569   ⟸   ENSMUST00000081894
RefSeq Acc Id: XP_036012306   ⟸   XM_036156413
- Peptide Label: isoform X4
Protein Domains
2-oxoglutarate dehydrogenase E1 component N-   2-oxoglutarate dehydrogenase E1 component/KDG C-   Transketolase-like pyrimidine-binding

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q60597-F1-model_v2 AlphaFold Q60597 1-1023 view protein structure

Promoters
RGD ID:6821472
Promoter ID:MM_KWN:6355
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day0,   3T3L1_Day2,   3T3L1_Day3,   BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   ES_Cell,   Kidney,   Liver,   Lung,   MEF_B4,   MEF_B6,   Spleen
Transcripts:ENSMUST00000079291,   ENSMUST00000101555,   ENSMUST00000109797,   NM_010956,   OTTMUST00000001538,   OTTMUST00000001539,   OTTMUST00000001540,   UC007HYG.1,   UC007HYH.1,   UC007HYI.1,   UC007HYJ.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36116,191,586 - 6,192,487 (+)MPROMDB
RGD ID:8673894
Promoter ID:EPDNEW_M14977
Type:initiation region
Name:Ogdh_1
Description:Mus musculus oxoglutarate (alpha-ketoglutarate) dehydrogenase, transcript variant 5, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M14979  EPDNEW_M14978  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38116,291,615 - 6,291,675EPDNEW
RGD ID:8673898
Promoter ID:EPDNEW_M14978
Type:multiple initiation site
Name:Ogdh_3
Description:Mus musculus oxoglutarate (alpha-ketoglutarate) dehydrogenase, transcript variant 5, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M14977  EPDNEW_M14979  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38116,292,559 - 6,292,619EPDNEW
RGD ID:8673896
Promoter ID:EPDNEW_M14979
Type:initiation region
Name:Ogdh_2
Description:Mus musculus oxoglutarate (alpha-ketoglutarate) dehydrogenase, transcript variant 5, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M14977  EPDNEW_M14978  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38116,292,676 - 6,292,736EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:1098267 AgrOrtholog
Ensembl Genes ENSMUSG00000020456 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000003461 ENTREZGENE
  ENSMUST00000003461.15 UniProtKB/Swiss-Prot
  ENSMUST00000081894 ENTREZGENE
  ENSMUST00000081894.5 UniProtKB/TrEMBL
  ENSMUST00000093350 ENTREZGENE
  ENSMUST00000093350.10 UniProtKB/Swiss-Prot
  ENSMUST00000101554 ENTREZGENE
  ENSMUST00000101554.9 UniProtKB/Swiss-Prot
  ENSMUST00000135124.8 UniProtKB/TrEMBL
  ENSMUST00000140765.8 UniProtKB/TrEMBL
Gene3D-CATH 3.40.50.11610 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  3.40.50.12470 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  3.40.50.970 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  TPP helical domain UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro 2-oxogl_dehyd_N UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  2oxoglutarate_DH_E1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  DH_E1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  KGD_C UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  KGD_C_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  THDP-binding UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Transketolase-like_Pyr-bd UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:18293 UniProtKB/Swiss-Prot
MGD MGI:1098267 ENTREZGENE
NCBI Gene 18293 ENTREZGENE
PANTHER 2-OXOGLUTARATE DEHYDROGENASE, MITOCHONDRIAL UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PTHR23152 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam 2-oxogl_dehyd_N UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  E1_dh UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  OxoGdeHyase_C UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Transket_pyr UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Ogdh PhenoGen
PIRSF Oxoglu_dh_E1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
SMART Transket_pyr UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF52518 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt ODO1_MOUSE UniProtKB/Swiss-Prot
  Q3UDM7 ENTREZGENE
  Q5DTI4 ENTREZGENE
  Q5SVX7 ENTREZGENE
  Q5SVX9 ENTREZGENE
  Q5SVY0_MOUSE UniProtKB/TrEMBL
  Q5SVY1_MOUSE UniProtKB/TrEMBL
  Q60597 ENTREZGENE
  Q6P8I7_MOUSE UniProtKB/TrEMBL
  Q6PFZ2 ENTREZGENE
  Q80Y57 ENTREZGENE
  Q8K0K7 ENTREZGENE
  Q8K2Z3 ENTREZGENE
  Q8R3M2 ENTREZGENE
  Q91WP2 ENTREZGENE
  Z4YJV4 ENTREZGENE, UniProtKB/TrEMBL
UniProt Secondary Q3UDM7 UniProtKB/Swiss-Prot
  Q5DTI4 UniProtKB/Swiss-Prot
  Q5SVX7 UniProtKB/Swiss-Prot
  Q5SVX9 UniProtKB/Swiss-Prot
  Q6PFZ2 UniProtKB/Swiss-Prot
  Q80Y57 UniProtKB/Swiss-Prot
  Q8K0K7 UniProtKB/Swiss-Prot
  Q8K2Z3 UniProtKB/Swiss-Prot
  Q8R3M2 UniProtKB/Swiss-Prot
  Q91WP2 UniProtKB/Swiss-Prot


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2012-12-25 Ogdh  oxoglutarate (alpha-ketoglutarate) dehydrogenase (lipoamide)    oxoglutarate dehydrogenase (lipoamide)  Symbol and/or name change 5135510 APPROVED